Pregenerated sensors for ZNF543 (Homo sapiens)
Ensembl gene IDs: ENSG00000178229Ensembl transcript IDs: ENST00000321545.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAGAGAGTGGAGAACGTTaGAGGACTAAGCAAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: IPRITVGMNNYTIIPIPGESGER*RTKQVF Trigger: GAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTC...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTAAAGATGTATGCTTCTaGACCTCGAGAGTGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTKDVCF*TSRVEN Trigger: GTTCTCCACTCTCGAGGTGCAGAAGCATACATCTTT...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAACAAGCATCTGAAGTaGACAATGTGTCCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: IPRITVGMNNYTIIPIPGNKHLK*TMCPNI Trigger: TATGTTTGGACACATTGTCCACTTCAGATGCTTGTT...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAATTTTCAAGCCCTCGTTaGTATAACTGTTCTGACACT | + |
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Preference number: 3 (lower is better) Translates to: LLHLESGERCRTKQVFTKFSSPR*YNCSDT Trigger: AGTGTCAGAACAGTTATACAAACGAGGGCTTGAAAA...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAAATTGCCATAGGCTaGTCAGACAAGTCTAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: IPRITVGMNNYTIIPIPGKIAIG*SDKSKR Trigger: TCTTTTAGACTTGTCTGACAAGCCTATGGCAATTTT...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAGCCATCCTGAGACCCTaGAGCCCTAGCGGGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGAILRP*SPSGAR Trigger: CCGGGCCCCGCTAGGGCTGCAGGGTCTCAGGATGGC...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGACCGAGGCTGCCATCCTaGGACCCTGCAGCCCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGPRLPS*DPAALA Trigger: CGCTAGGGCTGCAGGGTCTCAGGATGGCAGCCTCGG...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAACTCGGCAGGCGCCGGTaGAACACCCCGTTAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKLGRRR*NTPLGK Trigger: CTTCCCTAACGGGGTGTTCCACCGGCGCCTGCCGAG...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTCTCATTACCCTCCCCTaGTCAGGCCGCTGGACGCGC | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTLITLP*SGRWTR Trigger: GCGCGTCCAGCGGCCTGAGCAGGGGAGGGTAATGAG...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTCACCTGCGCCGAGGCTaGCATCCTGAGACCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTHLRRG*HPETLQ Trigger: CTGCAGGGTCTCAGGATGGCAGCCTCGGCGCAGGTG...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAGGTCACAGACACCTaGGCCGAGGCTGCCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGKVTDT*AEAAIL Trigger: CAGGATGGCAGCCTCGGCGCAGGTGTCTGTGACCTT...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTGACAGCCCAGAGACATaGGAAGTCCGCAGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTDSPET*EVRRSP Trigger: TGGAGACCTGCGGACTTCTCATGTCTCTGGGCTGTC...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTCAAGGTTCTCTGGGCTaGATCCAACTGTCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTQGSLG*IQLSPL Trigger: GAGTGGGGACAGTTGGATGCAGCCCAGAGAACCTTG...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAGATCAGCTCTGGTTTaGACAAAGGACAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGRSALV*TKDSPE Trigger: CTCTGGGCTGTCCTTTGTTCAAACCAGAGCTGATCT...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAACATACACCATCATCTaGCCCCAAACCATCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKTYTII*PQTITF Trigger: GAACGTGATGGTTTGGGGTCAGATGATGGTGTATGT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAATGATGTGTGAGGGATaGGCCGCGATTAAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKMMCEG*AAIKSL Trigger: AAGGCTTTTAATCGCGGCTCATCCCTCACACATCAT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAACTGGTAGATCAGCTCTaGTTTGAACAAAGGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKLVDQL*FEQRTA Trigger: GGCTGTCCTTTGTTCAAACCAGAGCTGATCTACCAG...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAAAAGTTCCTGGATGTTaGCTGAAGTCTGTGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKKVPGC*LKSVQS Trigger: TGACTGCACAGACTTCAGTCAACATCCAGGAACTTT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAAAAGATGTATGCTTCTaGACCTCGAGAGTGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKKDVCF*TSRVEN Trigger: GTTCTCCACTCTCGAGGTGCAGAAGCATACATCTTT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACATCAGGCAAGGCCAGGTaGGAAAAGGTAGGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTSGKAR*EKVGSV Trigger: CACAGAGCCTACCTTTTCTCACCTGGCCTTGCCTGA...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAATTCCTGGATGTTGACTaGAGTCTGTGCAGTCATAAA | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKFLDVD*SLCSHK Trigger: TTTATGACTGCACAGACTTCAGTCAACATCCAGGAA...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACATTCCCCAGAGAAAAATaGGCACAAAGCGGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTFPREK*AQSGRS Trigger: GCTGCGCCCGCTTTGTGCGCATTTTTCTCTGGGGAA...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGATTGGATTGCCCTAATTaGGAGTTCTTTGAGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGLDCPN*EFFEAP Trigger: AGGAGCCTCAAAGAACTCCCAATTAGGGCAATCCAA...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAGGATTACTGTGGGCATaGACAATTACACTATCATCC | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGGLLWA*TITLSS Trigger: GGATGATAGTGTAATTGTTCATGCCCACAGTAATCC...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTTTCAAGTGGACTTCTTaGATTTCAGATGGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTFKWTS*ISDGPS Trigger: GGATGGGCCATCTGAAATGCAAGAAGTCCACTTGAA...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAGTGTTGAATGAGGTCTaGACTCTCGCAAAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGVLNEV*TLAKSF Trigger: AAAGCTTTTTGCGAGAGTGCAGACCTCATTCAACAC...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTGAGAGTGGAGAACGTTaGAGGACTAAGCAAGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTESGER*RTKQVF Trigger: GAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTC...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTACATCCCTACATATATaGATGCCGGCTTGCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTTSLHI*MPACLL Trigger: TAACAGGCAAGCCGGCATGCATATATGTAGGGATGT...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACATCAGATGGCCCATCCTaGTCCTTGGATTGCCCTAAT | + |
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Preference number: 4 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTSDGPS*SLDCPN Trigger: ATTAGGGCAATCCAAGGATCAGGATGGGCCATCTGA...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAAACAAGCATCTGAAGTaGACAATGTGTCCAAACATA | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKNKHLK*TMCPNI Trigger: TATGTTTGGACACATTGTCCACTTCAGATGCTTGTT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGATTTTATAAAGATGTATaGTTCTGCACCTCGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IPRITVGMNNYTIIPIPGFYKDV*FCTSRV Trigger: CACTCTCGAGGTGCAGAAGCATACATCTTTATAAAA...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAAATCCCTATTTTCAAGTaGACTTCTTGCATTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLHLESGERCRTKQVFTKIPIFK*TSCISD Trigger: ATCTGAAATGCAAGAAGTCCACTTGAAAATAGGGAT...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR TCA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTGAGATCACCTTCTGTTaGAACTTGTTTCTGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTEITFC*NLFLCN Trigger: ATTACACAGAAACAAGTTTCAACAGAAGGTGATCTC...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CCA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACATTTTGTGTTGTCACCTaGATAGGAGCTTTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTFCVVT*IGALGE Trigger: CTCTCCCAAAGCTCCTATCCAGGTGACAACACAAAA...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR GCA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACAATATGCATGCCGGCTTaGCTGTTAAAATTCCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTICMPA*LLKFQL Trigger: TAACTGGAATTTTAACAGGCAAGCCGGCATGCATAT...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS GCA 90 bp | CGCCAAGATGCGGAGAAGGCGCGTAACAGCCTCATTACCCTCCCCTaGTCAGGCCGCTGGACGCGCCTACCCAGCGGTCCAGGCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: RQDAEKARNSLITLP*SGRWTRLPSGPGPT Trigger: TGTGGGGCCTGGACCGCTGGGTAGGCGCGTCCAGCGGCCTGAGCAGGGGAGGGTAATGAGGCTGTTACGCGCCTTCTCCGCATCTTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAATTTCAAGTGGACTTCTaGCATTTCAGATGGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LLHLESGERCRTKQVFTKFQVDF*HFRWPI Trigger: GATGGGCCATCTGAAATGCAAGAAGTCCACTTGAAA...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGACTAATTGGGAGTTCTTaGAGGCTCCTTGTGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: IPRITVGMNNYTIIPIPGLIGSS*RLLVSV Trigger: AACTGACACAAGGAGCCTCAAAGAACTCCCAATTAG...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGCACCTCGAGAGTGGAGAACGTTGCAGGACTAAGCAAGTTTTCACAAAATATATGCATGCCGGCTaGCCTGTTAAAATTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LLHLESGERCRTKQVFTKYMHAG*PVKIPV Trigger: AACTGGAATTTTAACAGGCAAGCCGGCATGCATATA...TTTTGTGAAAACTTGCTTAGTCCTGCAACGTTCTCCACTCTCGAGGTGCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACACTGTGGTCTTGGGTTTaGTGTTGTCACCTGGATAGG | + |
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Preference number: 5 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTLWSWV*CCHLDR Trigger: CCTATCCAGGTGACAACACAAAACCCAAGACCACAG...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | ATTCCCAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGATTTTCAAGCCCTCGTTaGTATAACTGTTCTGACACT | + |
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Preference number: 5 (lower is better) Translates to: IPRITVGMNNYTIIPIPGFSSPR*YNCSDT Trigger: AGTGTCAGAACAGTTATACAAACGAGGGCTTGAAAA...TCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | TATATGCATGCCGGCTTGCCTGTTAAAATTCCAGTTAAAGTGAATTTTCACACAGTGGATAATGTAGTGTaGAATGAGGTCTGCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: YMHAGLPVKIPVKVNFHTVDNVV*NEVCTL Trigger: GAGAGTGCAGACCTCATTCAACACTACATTATCCAC...TGTGTGAAAATTCACTTTAACTGGAATTTTAACAGGCAAGCCGGCATGCATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS-3UTR CAA 90 bp | CAGGATTACTGTGGGCATGAACAATTACACTATCATCCCTATCCCAGGAAAACTAAAATTGCCATAGGCTaGTCAGACAAGTCTAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: QDYCGHEQLHYHPYPRKTKIAIG*SDKSKR Trigger: TCTTTTAGACTTGTCTGACAAGCCTATGGCAATTTT...AGTTTTCCTGGGATAGGGATGATAGTGTAATTGTTCATGCCCACAGTAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS GCA 72 bp | ACAGACACCTGCGCCGAGGCTGCCATCCTGAGACCCTaGAGCCCTAGCGGGGCCCGGGAATGCCGCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TDTCAEAAILRP*SPSGARECRGS Trigger: TGAGCCGCGGCATTCCCGGGCCCCGCTAGGGCTGCAGGGTCTCAGGATGGCAGCCTCGGCGCAGGTGTCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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| CDS GCA 72 bp | GCGGAGAAGGCGCGTAACAGCCTCATTACCCTCCCCTaGTCAGGCCGCTGGACGCGCCTACCCAGCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AEKARNSLITLP*SGRWTRLPSGP Trigger: TGGACCGCTGGGTAGGCGCGTCCAGCGGCCTGAGCAGGGGAGGGTAATGAGGCTGTTACGCGCCTTCTCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321545.5 |
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