RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF541 (Homo sapiens)

Ensembl gene IDs: ENSG00000118156

Ensembl transcript IDs: ENST00000263351.9, ENST00000314121.8, ENST00000391901.7, ENST00000487275.1, ENST00000595558.1

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTaGCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGG +
Preference number: 1 (lower is better)
Translates to: PPDRDCIAVRQLSSS*LSVAKCPPCLQAGW
Trigger: CCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 90 bp ATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTaGATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: MNLRRVEPPAPPDRD*IAVRQLSSSCLSVA
Trigger: GGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 90 bp ATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATaGCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAG +
Preference number: 1 (lower is better)
Translates to: IAVRQLSSSCLSVAK*PPCLQAGWPTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGGAGGCAGAGGGGTaGCCCAAACGCCCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGGEAEG*PKRPGE
Trigger: CTCTCCAGGGCGTTTGGGGCACCCCTCTGCCTCCCC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGGGAGGCAGAGGGGTaGCCCAAACGCCCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGEAEG*PKRPGE
Trigger: CTCTCCAGGGCGTTTGGGGCACCCCTCTGCCTCCCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 2 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTGCCCCAAACGCCCTaGAGAGGCCGAAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGVPQTP*RGRREE
Trigger: CTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCAC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTGTTTGCAGGCAGGTTaGCCAACAGGGGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLCLQAG*PTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTGTTTGCAGGCAGGTTaGCCAACAGGGGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSCLQAG*PTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACA...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 2 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAATGCCCTCCATGTTTaGAGGCAGGTTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLNALHV*RQVGQQ
Trigger: CTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGTGCCCCAAACGCCCTaGAGAGGCCGAAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: CPTTELLLPICGQMPSMFVPQTP*RGRREE
Trigger: CTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCAC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGTTTGCAGGCAGGTTaGCCAACAGGGGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCCLQAG*PTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 2 (lower is better)
Translates to: CPTTELLLPICGQMPSMFEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAAATGCCCTCCATGTTTaGAGGCAGGTTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: GRDYEPKESGASSTTGQGNALHV*RQVGQQ
Trigger: CTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 72 bp CCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTaGAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: PPAYLWPNALHV*RQVGQQGTGRV
Trigger: CACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 72 bp AGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTaGATAGCTGTCCGACAACTGAGCTCCTCCTGCCTA +
Preference number: 3 (lower is better)
Translates to: RRVEPPAPPDRD*IAVRQLSSSCL
Trigger: TAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 72 bp CGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATaGCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGG +
Preference number: 3 (lower is better)
Translates to: RQLSSSCLSVAK*PPCLQAGWPTG
Trigger: CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR TCA 72 bp ACCGAACAATGCAGAATTCATCGCAAGACTAGGGACTaGATCTGGAAGGTAGAGTCCCCGCCCCAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: TEQCRIHRKTRD*IWKVESPPQGG
Trigger: CCCTCCCTGGGGCGGGGACTCTACCTTCCAGATTCAGTCCCTAGTCTTGCGATGAATTCTGCATTGTTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
3UTR GCA 72 bp AGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTaGCTATCTGTGGCCAAATGCCCTCCATGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: RDCIAVRQLSSS*LSVAKCPPCLQ
Trigger: CTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCGCAGGGAGCCCGCCTaGCTTCTGGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSRREPA*LLGLLE
Trigger: CTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGCGGGGCCCTGGGGTTaGCCAAGAGCCGGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSAGPWG*PRAGSL
Trigger: GAGGCTACCGGCTCTTGGGCAACCCCAGGGCCCCGC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGGGGACCTGGCCTCTaGGGGCACCAGGGACCGCAG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGGPGL*GHQGPQ
Trigger: CTGCGGTCCCTGGTGCCCCCAGAGGCCAGGTCCCCC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCCTCCCTTCGCTGTCTaGAGCCCCCGCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCPPFAV*SPRRGW
Trigger: CCAGCCCCGGCGGGGGCTTCAGACAGCGAAGGGAGG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGGACGAGGACCCCGATaGGGCGGGGCAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCGRGPR*GGAGTG
Trigger: GCCTGTCCCTGCCCCGCCTCATCGGGGTCCTCGTCC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCCGAGGGGCTTCCGCTaGTGGGTCCCGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGPRGFR*WVPGQT
Trigger: AGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCTCGG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGGCTGGGGAGCCCTCTaGCTCGGGGTTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGGWGAL*LGVSRA
Trigger: GGCCCTGGAAACCCCGAGGCAGAGGGCTCCCCAGCC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGCTGGGGAGCCCTCTaGCTCGGGGTTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGWGAL*LGVSRA
Trigger: GGCCCTGGAAACCCCGAGGCAGAGGGCTCCCCAGCC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGTCTCGTCTCGTGCTaGCGGGGGAGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLRLVSC*RGRPLW
Trigger: CCAGAGAGGCCTCCCCCGGCAGCACGAGACGAGACG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAAGCCCGCCTGCCTTCTaGGCCTCCTGGAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSPPAF*ASWRPG
Trigger: GCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGCCCGCCTGCCTTCTaGGCCTCCTGGAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGSPPAF*ASWRPG
Trigger: GCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTCGGGCGCAGGGAGCTaGGAGGAGACTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSSGAGS*EETAAT
Trigger: GGTGGCAGCAGTCTCCTCCCAGCTCCCTGCGCCCGA...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACGGCCTCAGGGCGGCTaGTTTGCCCTCGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGRPQGG*FALGRR
Trigger: CCTGCGCCCGAGGGCAAACCAGCCGCCCTGAGGCCG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACGGCCTCAGGGCGGCTaGTTTGCCCTCGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRPQGG*FALGRR
Trigger: CCTGCGCCCGAGGGCAAACCAGCCGCCCTGAGGCCG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGGGGGACCTGGCCTCTaGGGGCACCAGGGACCGCAG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGGGPGL*GHQGPQ
Trigger: CTGCGGTCCCTGGTGCCCCCAGAGGCCAGGTCCCCC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
66% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGATCTGGCTCCGGCTCTaGCGGGTCGGGGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGIWLRL*RVGGAV
Trigger: AACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGAT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCTGGCTCCGGCTCTaGCGGGTCGGGGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGIWLRL*RVGGAV
Trigger: AACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGAT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGCCAGCACTCCGCGGTaGACCGGGCCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGASTPR*TGPGAA
Trigger: CGCTGCTCCAGGCCCGGTCCACCGCGGAGTGCTGGC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGACGAGGACCCCGATaGGGCGGGGCAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGGRGPR*GGAGTG
Trigger: GCCTGTCCCTGCCCCGCCTCATCGGGGTCCTCGTCC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACCGAGGGGCTTCCGCTaGTGGGTCCCGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGPRGFR*WVPGQT
Trigger: AGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCTCGG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCGTCTCGTCTCGTGCTaGCGGGGGAGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGRLVSC*RGRPLW
Trigger: CCAGAGAGGCCTCCCCCGGCAGCACGAGACGAGACG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGCGGGGCCCTGGGGTTaGCCAAGAGCCGGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCAGPWG*PRAGSL
Trigger: GAGGCTACCGGCTCTTGGGCAACCCCAGGGCCCCGC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGCGGGGCCCTGGGGTTaGCCAAGAGCCGGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGAGPWG*PRAGSL
Trigger: GAGGCTACCGGCTCTTGGGCAACCCCAGGGCCCCGC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAAGGGGCTTCCGCTGCTaGGTCCCGGGCCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRGFRC*VPGQTR
Trigger: CCGAGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGGGGCTTCCGCTGCTaGGTCCCGGGCCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGRGFRC*VPGQTR
Trigger: CCGAGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGCCCGCCTGCCTTCTaGGCCTCCTGGAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSPPAF*ASWRPG
Trigger: GCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAGAATCGCGGGGCCCTaGGGTTGCCCAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLRIAGP*GCPRAG
Trigger: ACCGGCTCTTGGGCAACCCCAGGGCCCCGCGATTCT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGTGCCCCAAACGCCCTaGAGAGGCCGAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLVPQTP*RGRREE
Trigger: CTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCAC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGTGCCCCAAACGCCCTaGAGAGGCCGAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSVPQTP*RGRREE
Trigger: CTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCAC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGCCGCTTTCCTTTCCTaGCACTCCCCGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLAAFLS*HSPRWP
Trigger: GGGCCACCTCGGGGAGTGCCAGGAAAGGAAAGCGGC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCAGGCTCCCCAGCCGTaGAGGGTGGGGGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGQAPQP*RVGAAS
Trigger: AGAAGCGGCCCCCACCCTCCACGGCTGGGGAGCCTG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACGCAGGCGGCTCTGGTaGCATCCTGCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRRRLW*HPAGPG
Trigger: GCCTGGCCCTGCAGGATGCCACCAGAGCCGCCTGCG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGACCGCAGGCGGCTCTaGTGGCATCCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGDRRRL*WHPAGP
Trigger: TGGCCCTGCAGGATGCCACCAGAGCCGCCTGCGGTC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGCTGCTTCCCTCGAGGTaGCGGCCACTGGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGLLPSR*RPLVAV
Trigger: CACAGCGACCAGTGGCCGTCACCTCGAGGGAAGCAG...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGGCTCCACGTGGTCCTaGAGGCGGTGCCGCTTCATA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLGSTWS*RRCRFI
Trigger: TATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACCTCCCTTCGCTGTCTaGAGCCCCCGCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTPPFAV*SPRRGW
Trigger: CCAGCCCCGGCGGGGGCTTCAGACAGCGAAGGGAGG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCCACAGGTGGTCGCCTaGAGCCACCTACTGCACCAC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSPQVVA*SHLLHH
Trigger: GTGGTGCAGTAGGTGGCTTCAGGCGACCACCTGTGG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS-3UTR TCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCCTCCCGGATGGGGCTaGGCATTGGGGGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGPPGWG*ALGVVC
Trigger: ACACACCACCCCCAATGCTCAGCCCCATCCGGGAGG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCCGAGGGGCTTCCGCTaGTGGGTCCCGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGPRGFR*WVPGQT
Trigger: AGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCTCGG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCGCAGGGAGCCCGCCTaGCTTCTGGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRREPA*LLGLLE
Trigger: CTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATCAGGGCGGCTGGTTTaGCCTCGGGCGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGSGRLV*PRAQGA
Trigger: AGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTGA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTCAGGGCGGCTGGTTTaGCCTCGGGCGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSGRLV*PRAQGA
Trigger: AGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTGA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCGTCTCGTCTCGTGCTaGCGGGGGAGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGRLVSC*RGRPLW
Trigger: CCAGAGAGGCCTCCCCCGGCAGCACGAGACGAGACG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGACCACCAAAGGGGCTaGAGCTGTGGGGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLDHQRG*SCGVQG
Trigger: CCCTTGGACCCCACAGCTGCAGCCCCTTTGGTGGTC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCACGGGAGTCACCACTaGAGGGGGCCGATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLHGSHH*RGPMSA
Trigger: AGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGGGGAGGCAGAGGGGTaGCCCAAACGCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCGEAEG*PKRPGE
Trigger: CTCTCCAGGGCGTTTGGGGCACCCCTCTGCCTCCCC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGATGCTACTCACGATaGGGCGCAGGAGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLRCYSR*GAGGPG
Trigger: ACCGGGACCTCCTGCGCCGCATCGTGAGTAGCATCG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGGCGACCTGAACGTTaGCCTGAGCCTCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGRPER*PEPRAG
Trigger: GCCTGCACGAGGCTCAGGGCAACGTTCAGGTCGCCC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGGTCATCTTCCCCGCTaGCCGACCTGGGGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGGHLPR*PTWGRS
Trigger: CGAGCGACCCCAGGTCGGCCAGCGGGGAAGATGACC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGGTCATCTTCCCCGCTaGCCGACCTGGGGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGGHLPR*PTWGRS
Trigger: CGAGCGACCCCAGGTCGGCCAGCGGGGAAGATGACC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGGTCATCTTCCCCGCTaGCCGACCTGGGGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCGHLPR*PTWGRS
Trigger: CGAGCGACCCCAGGTCGGCCAGCGGGGAAGATGACC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACGGCCTCAGGGCGGCTaGTTTGCCCTCGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTRPQGG*FALGRR
Trigger: CCTGCGCCCGAGGGCAAACCAGCCGCCCTGAGGCCG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCGCGCCATTCTCGGCTaGGGCCTGCTTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCRAILG*GLLPWQ
Trigger: CTGCCAGGGAAGCAGGCCCCAGCCGAGAATGGCGCG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGAATCGCGGGGCCCTaGGGTTGCCCAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGRIAGP*GCPRAG
Trigger: ACCGGCTCTTGGGCAACCCCAGGGCCCCGCGATTCT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGGACATGTCAGGCGTTaGGAGGCTGGGGTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGGHVRR*EAGVRV
Trigger: GACCCGGACCCCAGCCTCCCAACGCCTGACATGTCC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGCGGTGGACCGGGCCTaGAGCAGCGCGGTATCTGGC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSAVDRA*SSAVSG
Trigger: GCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACCCAGCCGTGGAGGGTaGGGGCCGCTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGPSRGG*GPLLPL
Trigger: AAGCGGAAGAAGCGGCCCCCACCCTCCACGGCTGGG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCAGGCTCCCCAGCCGTaGAGGGTGGGGGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCQAPQP*RVGAAS
Trigger: AGAAGCGGCCCCCACCCTCCACGGCTGGGGAGCCTG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCGCAGGCGGCTCTGGTaGCATCCTGCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRRRLW*HPAGPG
Trigger: GCCTGGCCCTGCAGGATGCCACCAGAGCCGCCTGCG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGAGCAGGTGTGTCCGTaGCTTGTGGGGCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGEQVCP*LVGPSE
Trigger: CTCCGAGGGCCCCACAAGCCACGGACACACCTGCTC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGTCGCAGTCGACCTTaGCCTTCTTGGGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGSRSRP*PSWGRR
Trigger: CCTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGTCGCAGTCGACCTTaGCCTTCTTGGGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGSRSRP*PSWGRR
Trigger: CCTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTTCCCTCGAGGTaGCGGCCACTGGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGLLPSR*RPLVAV
Trigger: CACAGCGACCAGTGGCCGTCACCTCGAGGGAAGCAG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTTGCGTCTCGTCTCGTaGTGCCGGGGGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLRLVS*CRGRPL
Trigger: GAGAGGCCTCCCCCGGCAGCACGAGACGAGACGCAA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAACACCTGCGGTTCCTaGTTCCCTCGAGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSNTCGS*FPRGDG
Trigger: GCCGTCACCTCGAGGGAAGCAGGAACCGCAGGTGTT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGCTGGCTGCTCTCCTTaGTGTCTCGCTCCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGAGCSP*CLAPPR
Trigger: ACGGGGAGGAGCGAGACAGCAAGGAGAGCAGCCAGC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCGAGCTCCAGGTTGGTaGCCCCTCCTGGCATCACGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCRAPGW*PLLASR
Trigger: GCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGCCTCGTGCAGGCAGTaGAGAGCGAGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGASCRQ*RASSRL
Trigger: CAACCTGGAGCTCGCTCTGCACTGCCTGCACGAGGC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGCGACCTGAACGTTaGCCTGAGCCTCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGGRPER*PEPRAG
Trigger: GCCTGCACGAGGCTCAGGGCAACGTTCAGGTCGCCC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTCGGGCGCAGGGAGCTaGGAGGAGACTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSGAGS*EETAAT
Trigger: GGTGGCAGCAGTCTCCTCCCAGCTCCCTGCGCCCGA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTCGGGCGCAGGGAGCTaGGAGGAGACTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSSGAGS*EETAAT
Trigger: GGTGGCAGCAGTCTCCTCCCAGCTCCCTGCGCCCGA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTTTCCAGGGCCGGCGTaGAGAGAGTCCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLFPGPA*RESTAG
Trigger: TCCTGCTGTGGACTCTCTCCACGCCGGCCCTGGAAA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTGCTGCAAGGGGCGTTaGAACCGCGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSCCKGR*NRGHFQ
Trigger: CTGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCA...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGAGGCCATGGCTACCTaGCTCGGAGAAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGEAMAT*LGEAAQ
Trigger: CTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGGGCTTCTTGGTTCCTaGGGGACTATGCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSGLLGS*GTMPVP
Trigger: GGGGACAGGCATAGTCCCCCAGGAACCAAGAAGCCC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGCTCGGGGGTCCGCTTaGAGCCTGCATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGARGSA*SLHLGW
Trigger: CCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGCTCGGGGGTCCGCTTaGAGCCTGCATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGARGSA*SLHLGW
Trigger: CCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGCTCGGGGGTCCGCTTaGAGCCTGCATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGARGSA*SLHLGW
Trigger: CCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGTGCCCCAAACGCCCTaGAGAGGCCGAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGVPQTP*RGRREE
Trigger: CTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCAC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGACATGTCAGGCGTTaGGAGGCTGGGGTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGGHVRR*EAGVRV
Trigger: GACCCGGACCCCAGCCTCCCAACGCCTGACATGTCC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCTCCAGCACCTCGCTaGACATGTCAGGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLPPAPR*TCQALG
Trigger: TCCCAACGCCTGACATGTCCAGCGAGGTGCTGGAGG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTGGCACTCCCCGAGGTaGCCCTTCCTCCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGWHSPR*PFLLRQ
Trigger: CTGACGAAGGAGGAAGGGCCACCTCGGGGAGTGCCA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCGGTCAGGTGGTCCTaGCGCTTAAAGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLPVRWS*RLKALL
Trigger: CAGCAAGGCCTTTAAGCGCCAGGACCACCTGACCGG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCCAGCACTCCGCGGTaGACCGGGCCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFASTPR*TGPGAA
Trigger: CGCTGCTCCAGGCCCGGTCCACCGCGGAGTGCTGGC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACTGGCAGGGACCGTCTaGCCTCGGAAGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLAGTV*PRKRGR
Trigger: CCTGCCTCTCTTCCGAGGCCAGACGGTCCCTGCCAG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTCGATGGCTGGGAACTaGCAGGGACCGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGSMAGN*QGPSGL
Trigger: GAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGAAGCTGTGGCTCGATaGCTGGGAACTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSEAVAR*LGTGRD
Trigger: GTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCCCAGCCGTGGAGGGTaGGGGCCGCTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGPSRGG*GPLLPL
Trigger: AAGCGGAAGAAGCGGCCCCCACCCTCCACGGCTGGG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGACCGCAGGCGGCTCTaGTGGCATCCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSDRRRL*WHPAGP
Trigger: TGGCCCTGCAGGATGCCACCAGAGCCGCCTGCGGTC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGCTGAGCATTGGGGGTaGTGTGTAGGGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLAEHWG*CVGGAL
Trigger: CAGTGCTCCCCCTACACACCACCCCCAATGCTCAGC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAGGGCTGGCCTGAGTaGACGTGGAACAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLQGWPE*TWNRGC
Trigger: ACACCCTCTGTTCCACGTCCACTCAGGCCAGCCCTG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGGCCACTGGTCGCTGTaGAAACACATGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLGHWSL*KHMWLL
Trigger: GAGCAGCCACATGTGTTTTCACAGCGACCAGTGGCC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCTCCGGCTCTCTCTTaGCCCTCTTTTCTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLPPALS*PSFLAL
Trigger: CAGGGCTAGAAAAGAGGGTCAAGAGAGAGCCGGAGG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGCTCCACGTGGTCCTaGAGGCGGTGCCGCTTCATA +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGGSTWS*RRCRFI
Trigger: TATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGGGAGGTGCATTTCTaGTGGGAGGGCACCCTCGTC +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGREVHF*WEGTLV
Trigger: GACGAGGGTGCCCTCCCATCAGAAATGCACCTCCCT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGGGTGTCGCTGCAGTTaGGCCCTTGGCTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLGCRCS*ALGSLK
Trigger: TTTCAGAGAGCCAAGGGCTCAACTGCAGCGACACCC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGAGAACTGGCGCTGCTaGACACCTTCCCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGENWRC*TPSRTG
Trigger: GCCTGTGCGGGAAGGTGTTCAGCAGCGCCAGTTCTC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTTGTCTTCTGGTGGGTaGGCATGTGCCCGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLLSSGG*ACARSG
Trigger: ACCTGACCGGGCACATGCTCACCCACCAGAAGACAA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCACCAGGAACATGGGTaGCCGCAGGCGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGHQEHG*PQAALV
Trigger: CACCAGAGCCGCCTGCGGTCACCCATGTTCCTGGTG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCCTCCCGGATGGGGCTaGGCATTGGGGGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCPPGWG*ALGVVC
Trigger: ACACACCACCCCCAATGCTCAGCCCCATCCGGGAGG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGGTCAGGGCTGGCCTaGGTGGACGTGGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGWSGLA*VDVEQR
Trigger: CCTCTGTTCCACGTCCACTCAGGCCAGCCCTGACCA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCGCAGGGAGCCCGCCTaGCTTCTGGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFRREPA*LLGLLE
Trigger: CTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGAGCTGGGAGGAGACTaGTGCCACCTGGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCELGGD*CHLGMG
Trigger: TCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCTC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCAGGGCGGCTGGTTTaGCCTCGGGCGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSGRLV*PRAQGA
Trigger: AGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGGCTGGGGAGCCCTCTaGCTCGGGGTTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFGWGAL*LGVSRA
Trigger: GGCCCTGGAAACCCCGAGGCAGAGGGCTCCCCAGCC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTTGCGTCTCGTCTCGTaGTGCCGGGGGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLRLVS*CRGRPL
Trigger: GAGAGGCCTCCCCCGGCAGCACGAGACGAGACGCAA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGTCCAGAGACGGTGCTaGAAGGGGCGTTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCVQRRC*KGRWNR
Trigger: GCGGTTCCAACGCCCCTTGCAGCACCGTCTCTGGAC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGTCCAGAGACGGTGCTaGAAGGGGCGTTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGVQRRC*KGRWNR
Trigger: GCGGTTCCAACGCCCCTTGCAGCACCGTCTCTGGAC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCCACCTAACTGGGTCTaGCGTTGGCCTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGPPNWV*RWPVEG
Trigger: CCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACCACCTAACTGGGTCTaGCGTTGGCCTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGPPNWV*RWPVEG
Trigger: CCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTTCTCGGCTGGGGCCTaGTTCCCTGGCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSFSAGA*FPGSEA
Trigger: AGCCTCGCTGCCAGGGAAGCAGGCCCCAGCCGAGAA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAACACCTGCGGTTCCTaGTTCCCTCGAGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGNTCGS*FPRGDG
Trigger: GCCGTCACCTCGAGGGAAGCAGGAACCGCAGGTGTT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGACCACCAAAGGGGCTaGAGCTGTGGGGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGDHQRG*SCGVQG
Trigger: CCCTTGGACCCCACAGCTGCAGCCCCTTTGGTGGTC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGTCCGCTTGGAGCCTaGATTTGGGCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGPLGA*IWAGAE
Trigger: CTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACACGGGAGTCACCACTaGAGGGGGCCGATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGHGSHH*RGPMSA
Trigger: AGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGCCCATTCGGACTTGCTaGCACGGGAGTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGPIRTC*HGSHHC
Trigger: GCAGTGGTGACTCCCGTGGCAGCAAGTCCGAATGGG...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGGTGGGTGAGCATGTaGCCGGTCAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGWWVSM*PVRWSW
Trigger: CCAGGACCACCTGACCGGGCACATGCTCACCCACCA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGCTGGCTGCTCTCCTTaGTGTCTCGCTCCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGAGCSP*CLAPPR
Trigger: ACGGGGAGGAGCGAGACAGCAAGGAGAGCAGCCAGC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCGAGCTCCAGGTTGGTaGCCCCTCCTGGCATCACGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGRAPGW*PLLASR
Trigger: GCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGCCTCGTGCAGGCAGTaGAGAGCGAGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCASCRQ*RASSRL
Trigger: CAACCTGGAGCTCGCTCTGCACTGCCTGCACGAGGC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTAGGGGCTTCCGCTGCTaGGTCCCGGGCCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFRGFRC*VPGQTR
Trigger: CCGAGTCTGGCCCGGGACCCAGCAGCGGAAGCCCCT...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGCTGCCACCTGGGCATaGGAGAAGATCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCAATWA*EKIRWD
Trigger: GTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTTTTCTCCTGCGGGCTaGGGAGCCCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGFSPAG*GALCLG
Trigger: CCCGAGGCAGAGGGCTCCCCAGCCCGCAGGAGAAAA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTTCTCCTGCGGGCTaGGGAGCCCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCFSPAG*GALCLG
Trigger: CCCGAGGCAGAGGGCTCCCCAGCCCGCAGGAGAAAA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTGGGAACCCCGGGTGTaGTTTTTCTCCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGWEPRV*FFSCGL
Trigger: CAGCCCGCAGGAGAAAAACCACACCCGGGGTTCCCA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTCTGCCGTTGGCCTGTaGAGGGGAAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLSAVGL*RGRCPP
Trigger: TGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAACTGGGTCTGCCGTTaGCCTGTGGAGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSNWVCR*PVEGKM
Trigger: CATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTCCTCCCCACCTAACTaGGTCTGCCGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGSSPPN*VCRWPV
Trigger: CACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACGCGCCATTCTCGGCTaGGGCCTGCTTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTRAILG*GLLPWQ
Trigger: CTGCCAGGGAAGCAGGCCCCAGCCGAGAATGGCGCG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAGAATCGCGGGGCCCTaGGGTTGCCCAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGRIAGP*GCPRAG
Trigger: ACCGGCTCTTGGGCAACCCCAGGGCCCCGCGATTCT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTTGTCAGCTTGGACTTaGAGGGATCTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGLSAWT*RDLPGA
Trigger: GGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGGCTTCTTGGTTCCTaGGGGACTATGCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGLLGS*GTMPVP
Trigger: GGGGACAGGCATAGTCCCCCAGGAACCAAGAAGCCC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAAGGGGCTGCAGCTGTaGGGTCCAAGGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGKGLQL*GPRASW
Trigger: CCAAGAAGCCCTTGGACCCCACAGCTGCAGCCCCTT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGCCGCTTTCCTTTCCTaGCACTCCCCGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSAAFLS*HSPRWP
Trigger: GGGCCACCTCGGGGAGTGCCAGGAAAGGAAAGCGGC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATGTGCCCGGTCAGGTaGTCCTGGCGCTTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGMCPVR*SWRLKA
Trigger: GGCCTTTAAGCGCCAGGACCACCTGACCGGGCACAT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGAGCAGCGCGGTATCTaGCTCCGGCTCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTEQRGI*LRLWRV
Trigger: GACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCGGTGGACCGGGCCTaGAGCAGCGCGGTATCTGGC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFAVDRA*SSAVSG
Trigger: GCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTCGATGGCTGGGAACTaGCAGGGACCGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGSMAGN*QGPSGL
Trigger: GAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAGCCACTGGAAGCTGTaGCTCGATGGCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSSHWKL*LDGWEL
Trigger: CAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGAGCAGGTGTGTCCGTaGCTTGTGGGGCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCEQVCP*LVGPSE
Trigger: CTCCGAGGGCCCCACAAGCCACGGACACACCTGCTC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCAGTCGCAGTCGACCTTaGCCTTCTTGGGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSSRSRP*PSWGRR
Trigger: CCTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACT...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGAGGTTCCTGCGACTTaGGGAAGAGCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGEVPAT*GRAGGR
Trigger: TCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGCCACTGGTCGCTGTaGAAACACATGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGHWSL*KHMWLL
Trigger: GAGCAGCCACATGTGTTTTCACAGCGACCAGTGGCC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCATTTGGGCTGGAGCTaGGGATGGACTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSHLGWS*GWTPSY
Trigger: ATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCATTTGGGCTGGAGCTaGGGATGGACTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLHLGWS*GWTPSY
Trigger: ATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATG...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGCTCCACGTGGTCCTaGAGGCGGTGCCGCTTCATA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGSTWS*RRCRFI
Trigger: TATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGAACTGGCGCTGCTaGACACCTTCCCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGENWRC*TPSRTG
Trigger: GCCTGTGCGGGAAGGTGTTCAGCAGCGCCAGTTCTC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTGGTCAGGGCTGGCCTaGGTGGACGTGGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSWSGLA*VDVEQR
Trigger: CCTCTGTTCCACGTCCACTCAGGCCAGCCCTGACCA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATTGCGTCTCGTCTCGTaGTGCCGGGGGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQALRLVS*CRGRPL
Trigger: GAGAGGCCTCCCCCGGCAGCACGAGACGAGACGCAA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGTCCAGAGACGGTGCTaGAAGGGGCGTTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSVQRRC*KGRWNR
Trigger: GCGGTTCCAACGCCCCTTGCAGCACCGTCTCTGGAC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGGGTCCAGAGACGGTaGTGCAAGGGGCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGRVQRR*CKGRWN
Trigger: GTTCCAACGCCCCTTGCAGCACCGTCTCTGGACCCT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAAGGGTCCAGAGACGGTaGTGCAAGGGGCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRVQRR*CKGRWN
Trigger: GTTCCAACGCCCCTTGCAGCACCGTCTCTGGACCCT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATTCTCGGCTGGGGCCTaGTTCCCTGGCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTFSAGA*FPGSEA
Trigger: AGCCTCGCTGCCAGGGAAGCAGGCCCCAGCCGAGAA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGTCTCTCCCGAGGGCTaGATGGGACCTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGVSPEG*MGPFPL
Trigger: CAGAGGAAAAGGTCCCATGCAGCCCTCGGGAGAGAC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACCCATTCGGACTTGCTaGCACGGGAGTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGPIRTC*HGSHHC
Trigger: GCAGTGGTGACTCCCGTGGCAGCAAGTCCGAATGGG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGCCCCATTCGGACTTaGTGCCACGGGAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGPIRT*CHGSHH
Trigger: GTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGCCCCATTCGGACTTaGTGCCACGGGAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGGPIRT*CHGSHH
Trigger: GTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGGCCCCATTCGGACTTaGTGCCACGGGAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSGPIRT*CHGSHH
Trigger: GTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCGATGCTACTCACGATaGGGCGCAGGAGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSRCYSR*GAGGPG
Trigger: ACCGGGACCTCCTGCGCCGCATCGTGAGTAGCATCG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTTTCCAGGGCCGGCGTaGAGAGAGTCCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCFPGPA*RESTAG
Trigger: TCCTGCTGTGGACTCTCTCCACGCCGGCCCTGGAAA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATTTTCTCCTGCGGGCTaGGGAGCCCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAFSPAG*GALCLG
Trigger: CCCGAGGCAGAGGGCTCCCCAGCCCGCAGGAGAAAA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGCTGCAAGGGGCGTTaGAACCGCGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGCCKGR*NRGHFQ
Trigger: CTGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGCTGCAAGGGGCGTTaGAACCGCGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCCCKGR*NRGHFQ
Trigger: CTGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCGCGCCATTCTCGGCTaGGGCCTGCTTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFRAILG*GLLPWQ
Trigger: CTGCCAGGGAAGCAGGCCCCAGCCGAGAATGGCGCG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGAGGCCATGGCTACCTaGCTCGGAGAAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSEAMAT*LGEAAQ
Trigger: CTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGAGGCCATGGCTACCTaGCTCGGAGAAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCEAMAT*LGEAAQ
Trigger: CTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCATGAGAAGGAGGCCATaGCTACCTGGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSMRRRP*LPGSEK
Trigger: CTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCAT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTTGTCAGCTTGGACTTaGAGGGATCTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGLSAWT*RDLPGA
Trigger: GGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTTGTCAGCTTGGACTTaGAGGGATCTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLSAWT*RDLPGA
Trigger: GGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGCTTCGTCCAGTCTGTaGGACTGCCGTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLASSSL*DCRFAG
Trigger: ACCAGCAAAACGGCAGTCCCACAGACTGGACGAAGC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGCTTCGTCCAGTCTGTaGGACTGCCGTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSASSSL*DCRFAG
Trigger: ACCAGCAAAACGGCAGTCCCACAGACTGGACGAAGC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGGTCCAAGGGCTTCTTaGTTCCTGGGGGACTATGCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGGPRAS*FLGDYA
Trigger: GGCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCAAGGGGCTGCAGCTGTaGGGTCCAAGGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCKGLQL*GPRASW
Trigger: CCAAGAAGCCCTTGGACCCCACAGCTGCAGCCCCTT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGCTCCCGAGGGCTGCATaGGACCTTTTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGLPRAA*DLFLCP
Trigger: AGGACAGAGGAAAAGGTCCCATGCAGCCCTCGGGAG...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATTGGGAGTTGGATGGTaGCTGGGTCTCTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLGVGW*LGLSRG
Trigger: CCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAACTTGGGAGTTGGATaGTGGCTGGGTCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSNLGVG*WLGLSR
Trigger: TCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTGGCACTCCCCGAGGTaGCCCTTCCTCCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGWHSPR*PFLLRQ
Trigger: CTGACGAAGGAGGAAGGGCCACCTCGGGGAGTGCCA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGAGCAGCGCGGTATCTaGCTCCGGCTCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFEQRGI*LRLWRV
Trigger: GACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCTGTGGCTCGATGGCTaGGAACTGGCAGGGACCGTC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSLWLDG*ELAGTV
Trigger: GACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTGTGGCTCGATGGCTaGGAACTGGCAGGGACCGTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLWLDG*ELAGTV
Trigger: GACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAAGGTTCCGGAGCCACTaGAAGCTGTGGCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRFRSH*KLWLDG
Trigger: GCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGCTGAGCATTGGGGGTaGTGTGTAGGGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCAEHWG*CVGGAL
Trigger: CAGTGCTCCCCCTACACACCACCCCCAATGCTCAGC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCTCCTGGCATCACGCTaGAGCATGCCACATTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSLLASR*SMPHCR
Trigger: TCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTTGGTGCCCCCTCCTaGCATCACGCTGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGVGAPS*HHAGAC
Trigger: GCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAAC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATGTGTCCGTGGCTTGTaGGGCCCTCGGAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGCVRGL*GPRSRR
Trigger: TCTTCTGCTCCGAGGGCCCCACAAGCCACGGACACA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGTGTCCGTGGCTTGTaGGGCCCTCGGAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGCVRGL*GPRSRR
Trigger: TCTTCTGCTCCGAGGGCCCCACAAGCCACGGACACA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
3UTR CAA 72 bp TCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTaGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSCLSVAKCPPC*QAGWPTGDREG
Trigger: ACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTCCGCTGGGACTTGGTaGTCATCTGGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGSAGTW*SSGTPA
Trigger: TGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACCTCCGGCTCTCTCTTaGCCCTCTTTTCTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGPPALS*PSFLAL
Trigger: CAGGGCTAGAAAAGAGGGTCAAGAGAGAGCCGGAGG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAGGGAGGTGCATTTCTaGTGGGAGGGCACCCTCGTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGREVHF*WEGTLV
Trigger: GACGAGGGTGCCCTCCCATCAGAAATGCACCTCCCT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTCCGGGATCTCTGCCTaGAACCGGCTTCCTATATTG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLSGISA*NRLPIL
Trigger: CAATATAGGAAGCCGGTTTCAGGCAGAGATCCCGGA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCACACGTTGTTGCCTTTaGTTTTGGGACAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLTRCCL*FWDSPA
Trigger: TGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCACACGTTGTTGCCTTTaGTTTTGGGACAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSTRCCL*FWDSPA
Trigger: TGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTGGGAGGAGACTGCTaGCACCTGGGCATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLGGDC*HLGMGE
Trigger: TTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGAGCTGGGAGGAGACTaGTGCCACCTGGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTELGGD*CHLGMG
Trigger: TCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCTC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGAGCTGGGAGGAGACTaGTGCCACCTGGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAELGGD*CHLGMG
Trigger: TCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGGGTCCAGAGACGGTaGTGCAAGGGGCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRVQRR*CKGRWN
Trigger: GTTCCAACGCCCCTTGCAGCACCGTCTCTGGACCCT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCACCACCTAACTGGGTCTaGCGTTGGCCTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAPPNWV*RWPVEG
Trigger: CCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGG...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGACCACCAAAGGGGCTaGAGCTGTGGGGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQADHQRG*SCGVQG
Trigger: CCCTTGGACCCCACAGCTGCAGCCCCTTTGGTGGTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGTCTCTCCCGAGGGCTaGATGGGACCTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCVSPEG*MGPFPL
Trigger: CAGAGGAAAAGGTCCCATGCAGCCCTCGGGAGAGAC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCACACGGGAGTCACCACTaGAGGGGGCCGATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAHGSHH*RGPMSA
Trigger: AGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTG...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCAACTGAGCTCCTCCTaGCTATCTGTGGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSQLSSS*LSVAKC
Trigger: GCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCCACCGGACAGGGACTaGATAGCTGTCCGACAACTG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGPPDRD*IAVRQL
Trigger: CAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACCACCGGACAGGGACTaGATAGCTGTCCGACAACTG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGPPDRD*IAVRQL
Trigger: CAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTGCAGCCCTGCTCGATaGACACGAAGGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGCSPAR*TRRALS
Trigger: AGACAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCTCTTGCTGCAGCCCTaGTCGATGCACACGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCLLLQP*SMHTKG
Trigger: GCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTCTTGCTGCAGCCCTaGTCGATGCACACGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLLLQP*SMHTKG
Trigger: GCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACGCAGTAGCTCTTGCTaGAGCCCTGCTCGATGCACA +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGRSSSC*SPARCT
Trigger: TGTGCATCGAGCAGGGCTGCAGCAAGAGCTACTGCG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGGGCTTCCTTCAGGATaGACAGGCCGTGATGGACCT +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGGLPSG*TGRDGP
Trigger: AGGTCCATCACGGCCTGTGCATCCTGAAGGAAGCCC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGAGTTCCGGGATCTCTaGCTGAAACCGGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLEFRDL*LKPASY
Trigger: ATAGGAAGCCGGTTTCAGGCAGAGATCCCGGAACTC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGAGTTCCGGGATCTCTaGCTGAAACCGGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSEFRDL*LKPASY
Trigger: ATAGGAAGCCGGTTTCAGGCAGAGATCCCGGAACTC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTGTTGCCTTTGCTTTTaGGACAGCCCGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGCCLCF*DSPAGS
Trigger: GGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGCTGCCACCTGGGCATaGGAGAAGATCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTAATWA*EKIRWD
Trigger: GTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTCCAGGGCCGGCGTaGAGAGAGTCCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCFPGPA*RESTAG
Trigger: TCCTGCTGTGGACTCTCTCCACGCCGGCCCTGGAAA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTGGGAACCCCGGGTGTaGTTTTTCTCCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGWEPRV*FFSCGL
Trigger: CAGCCCGCAGGAGAAAAACCACACCCGGGGTTCCCA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAGATGTCTGGATTCCTaGAAGGGTCCAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSRCLDS*KGPETV
Trigger: CACCGTCTCTGGACCCTTCCAGGAATCCAGACATCT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTCTGCCGTTGGCCTGTaGAGGGGAAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGSAVGL*RGRCPP
Trigger: TGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGGTCCAAGGGCTTCTTaGTTCCTGGGGGACTATGCC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGGPRAS*FLGDYA
Trigger: GGCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTATGTGTCGGGTCACTaGAACCACGGGGATCGATTG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLYVSGH*NHGDRL
Trigger: CAATCGATCCCCGTGGTTCCAGTGACCCGACACATA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACTCCCGAGGGCTGCATaGGACCTTTTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLPRAA*DLFLCP
Trigger: AGGACAGAGGAAAAGGTCCCATGCAGCCCTCGGGAG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAACTTGGGAGTTGGATaGTGGCTGGGTCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGNLGVG*WLGLSR
Trigger: TCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCTGGAAGGGCTTCACTaGCCACTTCACCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSLEGLH*PLHPDD
Trigger: ATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGAGGAGGGGCAGCACTaGAGGCCCCATTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAEEGQH*RPHSDL
Trigger: CAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCCTCCAGCACCTCGCTaGACATGTCAGGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSPPAPR*TCQALG
Trigger: TCCCAACGCCTGACATGTCCAGCGAGGTGCTGGAGG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAAGGGCTTTGTCTTCTaGTGGGTGAGCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGKGFVF*WVSMCP
Trigger: CGGGCACATGCTCACCCACCAGAAGACAAAGCCCTT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCTGGCAGGGACCGTCTaGCCTCGGAAGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLAGTV*PRKRGR
Trigger: CCTGCCTCTCTTCCGAGGCCAGACGGTCCCTGCCAG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAAGCTGTGGCTCGATaGCTGGGAACTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGEAVAR*LGTGRD
Trigger: GTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGGTTCCGGAGCCACTaGAAGCTGTGGCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRFRSH*KLWLDG
Trigger: GCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCAGGGCTGGCCTGAGTaGACGTGGAACAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSQGWPE*TWNRGC
Trigger: ACACCCTCTGTTCCACGTCCACTCAGGCCAGCCCTG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGGTTCCTGCGACTTaGGGAAGAGCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGEVPAT*GRAGGR
Trigger: TCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCCGCTGGGACTTGGTaGTCATCTGGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSAGTW*SSGTPA
Trigger: TGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACCTTTTGTGATCCTTaGAGCCGCGCCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGTFCDP*SRAILG
Trigger: GCCGAGAATGGCGCGGCTTCAAGGATCACAAAAGGT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCATTTGGGCTGGAGCTaGGGATGGACTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGHLGWS*GWTPSY
Trigger: ATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGGGTGTCGCTGCAGTTaGGCCCTTGGCTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSGCRCS*ALGSLK
Trigger: TTTCAGAGAGCCAAGGGCTCAACTGCAGCGACACCC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTCCAGAAGTGGGTTTTaGGGGGAACTGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGSRSGF*GELCCR
Trigger: GCGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGGAACAGAGGGTGTTaGAGTACACCCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCWNRGC*STPQSP
Trigger: AGGGCTCTGGGGTGTACTTCAACACCCTCTGTTCCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTGGAACACCTGCATCTaGTCGTGGCTCACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGWNTCI*SWLTRG
Trigger: ACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCATCATCTGGAACACCTaGATCTGCTCGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSIIWNT*ICSWLT
Trigger: TGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGAT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACTGGGAGGAGACTGCTaGCACCTGGGCATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTLGGDC*HLGMGE
Trigger: TTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGTGGGACTGCCGTTTTaGTGGTTACCTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSVGLPF*WLPLPA
Trigger: GGCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCAC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTCTGGCTGCAGTTCTTaGAGACAAAAGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLSGCSS*RQKCSW
Trigger: CCAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTCTCTCCCGAGGGCTaGATGGGACCTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGVSPEG*MGPFPL
Trigger: CAGAGGAAAAGGTCCCATGCAGCCCTCGGGAGAGAC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGTCCGCTTGGAGCCTaGATTTGGGCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTGPLGA*IWAGAE
Trigger: CTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAATGCCCTGGCTCTCTaGACTTCCCAACAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGNALAL*TSQQLG
Trigger: CCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAATGCCCTCCATGTTTaGAGGCAGGTTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGNALHV*RQVGQQ
Trigger: CTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCTATCTGTGGCCAAATaGCCTCCATGTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSLSVAK*PPCLQA
Trigger: TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCCACCGGACAGGGACTaGATAGCTGTCCGACAACTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGPPDRD*IAVRQL
Trigger: CAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTCCCCAAGCCTCCCTaGTCTAGAAGTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGLPKPP*SRSGRE
Trigger: TTCCCTTCCACTTCTAGAGCAGGGAGGCTTGGGGAG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCTGAGACTCCGAATCTaGGTACTCCTCCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGLRLRI*VLLQQL
Trigger: AAGCTGCTGGAGGAGTACGCAGATTCGGAGTCTCAG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGTGTCAGGTAGTGCTTaGTCAGAGAACTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGVSGSA*SENWRC
Trigger: GCAGCGCCAGTTCTCTGAGCAAGCACTACCTGACAC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTGGTGGGTGAGCATGTaGCCGGTCAGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFWWVSM*PVRWSW
Trigger: CCAGGACCACCTGACCGGGCACATGCTCACCCACCA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGCAGCCCTGCTCGATaGACACGAAGGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGCSPAR*TRRALS
Trigger: AGACAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCGCAGTAGCTCTTGCTaGAGCCCTGCTCGATGCACA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRSSSC*SPARCT
Trigger: TGTGCATCGAGCAGGGCTGCAGCAAGAGCTACTGCG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGTCGCAGTAGCTCTTaGTGCAGCCCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSRSSS*CSPARC
Trigger: GCATCGAGCAGGGCTGCAGCAAGAGCTACTGCGACT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGGCTTCCTTCAGGATaGACAGGCCGTGATGGACCT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGGLPSG*TGRDGP
Trigger: AGGTCCATCACGGCCTGTGCATCCTGAAGGAAGCCC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTCTTCTGGTGGACGATaGTACTCACGATGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSSGGR*YSRCGA
Trigger: TGCGCCGCATCGTGAGTAGCATCGTCCACCAGAAGA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCCTGAAGCCACCTACTaGACCACTCCATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCPEATY*TTPSWP
Trigger: TGGCCATGATGGAGTGGTGCAGTAGGTGGCTTCAGG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS-3UTR GCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTTCTTCCGCTTTCTCTaGTGGCTGCTCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGFFRFL*WLLSLL
Trigger: CAGCAAGGAGAGCAGCCAGCAGAGAAAGCGGAAGAA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTTCTTCCGCTTTCTCTaGTGGCTGCTCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGFFRFL*WLLSLL
Trigger: CAGCAAGGAGAGCAGCCAGCAGAGAAAGCGGAAGAA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCATCACGCTGGAGCATaGCACATTGCAGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGHHAGA*HIAELG
Trigger: ACCGAGCTCTGCAATGTGGCATGCTCCAGCGTGATG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCATCACGCTGGAGCATaGCACATTGCAGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCHHAGA*HIAELG
Trigger: ACCGAGCTCTGCAATGTGGCATGCTCCAGCGTGATG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGTTGCCTTTGCTTTTaGGACAGCCCGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGCCLCF*DSPAGS
Trigger: GGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTGTTGCCTTTGCTTTTaGGACAGCCCGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGCCLCF*DSPAGS
Trigger: GGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGACGGCCGAGGGCTTGTaGACAACAAACACGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGTAEGL*TTNTLL
Trigger: CAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGACTTGAGGAAGAGCTaGCGGAAGAGCGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTDLRKS*RKSGEA
Trigger: TGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGACTTGAGGAAGAGCTaGCGGAAGAGCGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQADLRKS*RKSGEA
Trigger: TGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCACCTGCATCTGCTCGTaGCTCACAAGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCTCICS*LTRGSC
Trigger: GCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAACCTGCATCTGCTCGTaGCTCACAAGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGTCICS*LTRGSC
Trigger: GCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATGGGAACCCCGGGTGTaGTTTTTCTCCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAWEPRV*FFSCGL
Trigger: CAGCCCGCAGGAGAAAAACCACACCCGGGGTTCCCA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGATGTCTGGATTCCTaGAAGGGTCCAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGRCLDS*KGPETV
Trigger: CACCGTCTCTGGACCCTTCCAGGAATCCAGACATCT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAACTGGGTCTGCCGTTaGCCTGTGGAGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGNWVCR*PVEGKM
Trigger: CATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATCCTCCCCACCTAACTaGGTCTGCCGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQASSPPN*VCRWPV
Trigger: CACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGGACTGCCGTTTTGCTaGTTACCTCTGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGGLPFC*LPLPAT
Trigger: TGTGGCAGGCAGAGGTAACCAGCAAAACGGCAGTCC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCTTCTTGGTTCCTaGGGGACTATGCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTGLLGS*GTMPVP
Trigger: GGGGACAGGCATAGTCCCCCAGGAACCAAGAAGCCC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAAAGGGGCTGCAGCTGTaGGGTCCAAGGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTKGLQL*GPRASW
Trigger: CCAAGAAGCCCTTGGACCCCACAGCTGCAGCCCCTT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAACTTGGGAGTTGGATaGTGGCTGGGTCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGNLGVG*WLGLSR
Trigger: TCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCGGTGCCGCTTCATATaGGCATTTCGACTCTTGATC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSRCRFI*AFRLLI
Trigger: GATCAAGAGTCGAAATGCCCATATGAAGCGGCACCG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACCGGTCAGGTGGTCCTaGCGCTTAAAGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTPVRWS*RLKALL
Trigger: CAGCAAGGCCTTTAAGCGCCAGGACCACCTGACCGG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAATGTGCCCGGTCAGGTaGTCCTGGCGCTTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTMCPVR*SWRLKA
Trigger: GGCCTTTAAGCGCCAGGACCACCTGACCGGGCACAT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGCTTTGTCTTCTGGTaGGTGAGCATGTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGGFVFW*VSMCPV
Trigger: GACCGGGCACATGCTCACCCACCAGAAGACAAAGCC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGGCTTTGTCTTCTGGTaGGTGAGCATGTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSGFVFW*VSMCPV
Trigger: GACCGGGCACATGCTCACCCACCAGAAGACAAAGCC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCCATCATATCTCCCCATaGCTTCCAGACCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSHHISP*LPDQRS
Trigger: GCTTCTCTGGTCTGGAAGCCATGGGGAGATATGATG...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCTCCTGGCATCACGCTaGAGCATGCCACATTGCAGA +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGLLASR*SMPHCR
Trigger: TCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGTTGGTGCCCCCTCCTaGCATCACGCTGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFVGAPS*HHAGAC
Trigger: GCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAAC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTCCGCTGGGACTTGGTaGTCATCTGGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSSAGTW*SSGTPA
Trigger: TGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTACCTTTTGTGATCCTTaGAGCCGCGCCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCTFCDP*SRAILG
Trigger: GCCGAGAATGGCGCGGCTTCAAGGATCACAAAAGGT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCCTTTTCACCTTTTGTaGTCCTTGAAGCCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGPFHLL*SLKPRH
Trigger: ATGGCGCGGCTTCAAGGATCACAAAAGGTGAAAAGG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACCTCCGGCTCTCTCTTaGCCCTCTTTTCTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTPPALS*PSFLAL
Trigger: CAGGGCTAGAAAAGAGGGTCAAGAGAGAGCCGGAGG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCCAGAAGTGGGTTTTaGGGGGAACTGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSRSGF*GELCCR
Trigger: GCGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATTGTCTTCTGGTGGGTaGGCATGTGCCCGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQALSSGG*ACARSG
Trigger: ACCTGACCGGGCACATGCTCACCCACCAGAAGACAA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTGGAACAGAGGGTGTTaGAGTACACCCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGWNRGC*STPQSP
Trigger: AGGGCTCTGGGGTGTACTTCAACACCCTCTGTTCCA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCTCACAAGAGGTTCCTaGGACTTGAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGLTRGS*DLRKSW
Trigger: CCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGGAACACCTGCATCTaGTCGTGGCTCACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCWNTCI*SWLTRG
Trigger: ACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCTGGGAGGAGACTGCTaGCACCTGGGCATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLGGDC*HLGMGE
Trigger: TTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGTGGGACTGCCGTTTTaGTGGTTACCTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTVGLPF*WLPLPA
Trigger: GGCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCAC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTCCAGTCTGTGGGACTaGCGTTTTGCTGGTTACCTC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSSLWD*RFAGYL
Trigger: GAGGTAACCAGCAAAACGGCAGTCCCACAGACTGGA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTCTGGCTGCAGTTCTTaGAGACAAAAGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGSGCSS*RQKCSW
Trigger: CCAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCGAAAACACATGTGGCTaGTCAGCCCTTTCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLENTCG*SALSPY
Trigger: ATACGGAGAAAGGGCTGAGCAGCCACATGTGTTTTC...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTCTGTGCCAAACACCTaGGGTTCCTGCTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSSVPNT*GSCFPR
Trigger: TCGAGGGAAGCAGGAACCGCAGGTGTTTGGCACAGA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTCTGGATCATGGCCATaGTCCCTATGTGTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSGSWP*SLCVGS
Trigger: TGACCCGACACATAGGGAGCATGGCCATGATCCAGA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263351.9
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGGTCCGCTTGGAGCCTaGATTTGGGCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFGPLGA*IWAGAE
Trigger: CTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAATGCCCTCCATGTTTaGAGGCAGGTTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGNALHV*RQVGQQ
Trigger: CTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCAACTGAGCTCCTCCTaGCTATCTGTGGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGQLSSS*LSVAKC
Trigger: GCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTCCCCAAGCCTCCCTaGTCTAGAAGTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLPKPP*SRSGRE
Trigger: TTCCCTTCCACTTCTAGAGCAGGGAGGCTTGGGGAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCTCCCCAAGCCTCCCTaGTCTAGAAGTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSLPKPP*SRSGRE
Trigger: TTCCCTTCCACTTCTAGAGCAGGGAGGCTTGGGGAG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACTGAGACTCCGAATCTaGGTACTCCTCCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLRLRI*VLLQQL
Trigger: AAGCTGCTGGAGGAGTACGCAGATTCGGAGTCTCAG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAAGTCGCAGTAGCTCTTaGTGCAGCCCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSRSSS*CSPARC
Trigger: GCATCGAGCAGGGCTGCAGCAAGAGCTACTGCGACT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACCAGAGAAGCTACATaGTCGTCAGTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGTREAT*SSVPAR
Trigger: CCTGGCTGGAACTGACGAGCATGTAGCTTCTCTGGT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTTGTCCCATGGCCATaGTCCCTATGTGTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLVPWP*SLCVGS
Trigger: TGACCCGACACATAGGGAGCATGGCCATGGGACAAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACGGCCGAGGGCTTGTaGACAACAAACACGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGTAEGL*TTNTLL
Trigger: CAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGACTTGAGGAAGAGCTaGCGGAAGAGCGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFDLRKS*RKSGEA
Trigger: TGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTACCTGCATCTGCTCGTaGCTCACAAGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCTCICS*LTRGSC
Trigger: GCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGACTTGGTGATCATCTaGAACACCTGCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGDLVII*NTCICS
Trigger: CGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCTGCCGTTGGCCTGTaGAGGGGAAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSAVGL*RGRCPP
Trigger: TGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTCCTCCCCACCTAACTaGGTCTGCCGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFSSPPN*VCRWPV
Trigger: CACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGACTGCCGTTTTGCTaGTTACCTCTGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGLPFC*LPLPAT
Trigger: TGTGGCAGGCAGAGGTAACCAGCAAAACGGCAGTCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGCTTCGTCCAGTCTGTaGGACTGCCGTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSASSSL*DCRFAG
Trigger: ACCAGCAAAACGGCAGTCCCACAGACTGGACGAAGC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGTCCAAGGGCTTCTTaGTTCCTGGGGGACTATGCC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTGPRAS*FLGDYA
Trigger: GGCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATATGTGTCGGGTCACTaGAACCACGGGGATCGATTG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGYVSGH*NHGDRL
Trigger: CAATCGATCCCCGTGGTTCCAGTGACCCGACACATA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTTGGGAGTTGGATGGTaGCTGGGTCTCTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLGVGW*LGLSRG
Trigger: CCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTCTTGGTCTTTAACTTaGGAGTTGGATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLSWSLT*ELDGGW
Trigger: CCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGGAAGGGCTTCACTaGCCACTTCACCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGLEGLH*PLHPDD
Trigger: ATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCCTCTTCCTTTAGCTaGAAGGGCTTCACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSSSFS*KGFTGH
Trigger: GTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATGTTTGCAGGCAGGTTaGCCAACAGGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQACLQAG*PTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACCTCCTGCCTATCTGTaGCCAAATGCCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGPPAYL*PNALHV
Trigger: AACATGGAGGGCATTTGGCCACAGATAGGCAGGAGG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGCTGCAGTTGAGCCCTTaGCTCTCTGAAAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGLQLSP*LSENEG
Trigger: CCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAG...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCAAGGGCTTTGTCTTCTaGTGGGTGAGCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSKGFVF*WVSMCP
Trigger: CGGGCACATGCTCACCCACCAGAAGACAAAGCCCTT...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGAAGGGGTCTTCTGGTaGACGATGCTACTCACGATG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGEGVFW*TMLLTM
Trigger: CATCGTGAGTAGCATCGTCCACCAGAAGACCCCTTC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGAGAAGGGGTCTTCTaGTGGACGATGCTACTCACG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGEGVF*WTMLLT
Trigger: CGTGAGTAGCATCGTCCACCAGAAGACCCCTTCTCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGCACCACTCCATCATaGCCATGCTCCCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCCTTPS*PCSLCV
Trigger: GACACATAGGGAGCATGGCCATGATGGAGTGGTGCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS-3UTR TCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAACCTTTTGTGATCCTTaGAGCCGCGCCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTTFCDP*SRAILG
Trigger: GCCGAGAATGGCGCGGCTTCAAGGATCACAAAAGGT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCTTGTAAGGATGCCTaGGACTCCGAATCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSCKDA*DSESAY
Trigger: GTACGCAGATTCGGAGTCTCAGGCATCCTTACAAGA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTCCGGGATCTCTGCCTaGAACCGGCTTCCTATATTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGSGISA*NRLPIL
Trigger: CAATATAGGAAGCCGGTTTCAGGCAGAGATCCCGGA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTCTATCCTGTGTCTCTaGGCTGATCATCATATCTCC +
Preference number: 4 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLSILCL*ADHHIS
Trigger: GGAGATATGATGATCAGCTCAGAGACACAGGATAGA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTACACGTTGTTGCCTTTaGTTTTGGGACAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCTRCCL*FWDSPA
Trigger: TGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCTCACAAGAGGTTCCTaGGACTTGAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGLTRGS*DLRKSW
Trigger: CCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCTCACAAGAGGTTCCTaGGACTTGAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSLTRGS*DLRKSW
Trigger: CCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTGGAACACCTGCATCTaGTCGTGGCTCACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCWNTCI*SWLTRG
Trigger: ACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATTAGAGGATCGCAGCTaGTTGGCCAGAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLEDRS*LAREEM
Trigger: CATCTCTTCTCTGGCCAAGCAGCTGCGATCCTCTAA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTTAGAGGATCGCAGCTaGTTGGCCAGAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLEDRS*LAREEM
Trigger: CATCTCTTCTCTGGCCAAGCAGCTGCGATCCTCTAA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGTGGGACTGCCGTTTTaGTGGTTACCTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFVGLPF*WLPLPA
Trigger: GGCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCAC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTCCAGTCTGTGGGACTaGCGTTTTGCTGGTTACCTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGSSLWD*RFAGYL
Trigger: GAGGTAACCAGCAAAACGGCAGTCCCACAGACTGGA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTCCAGTCTGTGGGACTaGCGTTTTGCTGGTTACCTC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSSSLWD*RFAGYL
Trigger: GAGGTAACCAGCAAAACGGCAGTCCCACAGACTGGA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCTGTGCCAAACACCTaGGGTTCCTGCTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSVPNT*GSCFPR
Trigger: TCGAGGGAAGCAGGAACCGCAGGTGTTTGGCACAGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGCTTGCAAAACTCTGTaGCAAACACCTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCACKTL*QTPAVP
Trigger: AGGAACCGCAGGTGTTTGGCACAGAGTTTTGCAAGC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGCTTGCAAAACTCTGTaGCAAACACCTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGACKTL*QTPAVP
Trigger: AGGAACCGCAGGTGTTTGGCACAGAGTTTTGCAAGC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCCCTTTCACACTCTCTaGATGGAAAAATGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCPFHTL*MEKCPG
Trigger: GCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAGGG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCTATCTGTGGCCAAATaGCCTCCATGTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLSVAK*PPCLQA
Trigger: TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGTGTCAGGTAGTGCTTaGTCAGAGAACTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTVSGSA*SENWRC
Trigger: GCAGCGCCAGTTCTCTGAGCAAGCACTACCTGACAC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATGGAGCATGCCACATTaGAGAGCTCGGTCACTCTAT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGWSMPH*RARSLY
Trigger: ATAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGACTTGGTGATCATCTaGAACACCTGCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGDLVII*NTCICS
Trigger: CGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGATGTCTGGATTCCTaGAAGGGTCCAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRCLDS*KGPETV
Trigger: CACCGTCTCTGGACCCTTCCAGGAATCCAGACATCT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAATGAGAAGGAGGCCATaGCTACCTGGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTMRRRP*LPGSEK
Trigger: CTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCAT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGACTGCCGTTTTGCTaGTTACCTCTGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTGLPFC*LPLPAT
Trigger: TGTGGCAGGCAGAGGTAACCAGCAAAACGGCAGTCC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTATGTGTCGGGTCACTaGAACCACGGGGATCGATTG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGYVSGH*NHGDRL
Trigger: CAATCGATCCCCGTGGTTCCAGTGACCCGACACATA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCTCCCGAGGGCTGCATaGGACCTTTTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLPRAA*DLFLCP
Trigger: AGGACAGAGGAAAAGGTCCCATGCAGCCCTCGGGAG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACATGGAAAAATGCCCTaGCTCTCTGCACTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGHGKMP*LSALPN
Trigger: GTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTTCACACTCTCTGCATaGAAAAATGCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGFTLSA*KNALAL
Trigger: GAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACGGTGCCGCTTCATATaGGCATTTCGACTCTTGATC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGRCRFI*AFRLLI
Trigger: GATCAAGAGTCGAAATGCCCATATGAAGCGGCACCG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTCCTCTTCCTTTAGCTaGAAGGGCTTCACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGSSSFS*KGFTGH
Trigger: GTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTGTTTGCAGGCAGGTTaGCCAACAGGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFCLQAG*PTGDRE
Trigger: CTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCCTCCTGCCTATCTGTaGCCAAATGCCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGPPAYL*PNALHV
Trigger: AACATGGAGGGCATTTGGCCACAGATAGGCAGGAGG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCTGCAGTTGAGCCCTTaGCTCTCTGAAAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLQLSP*LSENEG
Trigger: CCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGCTGCAGTCCAGAAGTaGGTTTTGAGGGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSAAVQK*VLRGTV
Trigger: CACAGTTCCCCTCAAAACCCACTTCTGGACTGCAGC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGCTGCAGTCCAGAAGTaGGTTTTGAGGGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCAAVQK*VLRGTV
Trigger: CACAGTTCCCCTCAAAACCCACTTCTGGACTGCAGC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGAGAAGGGGTCTTCTaGTGGACGATGCTACTCACG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAGEGVF*WTMLLT
Trigger: CGTGAGTAGCATCGTCCACCAGAAGACCCCTTCTCC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTAGCCACTGGAAGCTGTaGCTCGATGGCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFSHWKL*LDGWEL
Trigger: CAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCT...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACATCATATCTCCCCATaGCTTCCAGACCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGHHISP*LPDQRS
Trigger: GCTTCTCTGGTCTGGAAGCCATGGGGAGATATGATG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACTTTCTCTTGTCCCATaGCCATGCTCCCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGLSLVP*PCSLCV
Trigger: GACACATAGGGAGCATGGCCATGGGACAAGAGAAAG...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCCTTTTCACCTTTTGTaGTCCTTGAAGCCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCPFHLL*SLKPRH
Trigger: ATGGCGCGGCTTCAAGGATCACAAAAGGTGAAAAGG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCCTTTTCACCTTTTGTaGTCCTTGAAGCCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSPFHLL*SLKPRH
Trigger: ATGGCGCGGCTTCAAGGATCACAAAAGGTGAAAAGG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTCTTGTAAGGATGCCTaGGACTCCGAATCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSCKDA*DSESAY
Trigger: GTACGCAGATTCGGAGTCTCAGGCATCCTTACAAGA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCCTGTGTCTCTGAGCTaGTCATCATATCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCPVSLS*SSYLPM
Trigger: CATGGGGAGATATGATGATCAGCTCAGAGACACAGG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGCCTGTGTCTCTGAGCTaGTCATCATATCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGPVSLS*SSYLPM
Trigger: CATGGGGAGATATGATGATCAGCTCAGAGACACAGG...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGATCATCTGGAACACCTaGATCTGCTCGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGIIWNT*ICSWLT
Trigger: TGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGAT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTTAGAGGATCGCAGCTaGTTGGCCAGAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSLEDRS*LAREEM
Trigger: CATCTCTTCTCTGGCCAAGCAGCTGCGATCCTCTAA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATTTGCTGGTTACCTCTaGCTGCCACATTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGFAGYL*LPHSLP
Trigger: AGGAAGAGAATGTGGCAGGCAGAGGTAACCAGCAAA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATTTGCTGGTTACCTCTaGCTGCCACATTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGFAGYL*LPHSLP
Trigger: AGGAAGAGAATGTGGCAGGCAGAGGTAACCAGCAAA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTTTGCTGGTTACCTCTaGCTGCCACATTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGFAGYL*LPHSLP
Trigger: AGGAAGAGAATGTGGCAGGCAGAGGTAACCAGCAAA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGAAAACACATGTGGCTaGTCAGCCCTTTCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGENTCG*SALSPY
Trigger: ATACGGAGAAAGGGCTGAGCAGCCACATGTGTTTTC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTCTGTGCCAAACACCTaGGGTTCCTGCTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFSVPNT*GSCFPR
Trigger: TCGAGGGAAGCAGGAACCGCAGGTGTTTGGCACAGA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGCTTGCAAAACTCTGTaGCAAACACCTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCACKTL*QTPAVP
Trigger: AGGAACCGCAGGTGTTTGGCACAGAGTTTTGCAAGC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCTATCTGTGGCCAAATaGCCTCCATGTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCLSVAK*PPCLQA
Trigger: TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACCTTGCTGCAGATTTTaGAGACGTGCTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGPCCRF*RRASFP
Trigger: AGGAAAGGAAGCACGTCTGCAAAATCTGCAGCAAGG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTCTTCTGGTGGACGATaGTACTCACGATGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFSSGGR*YSRCGA
Trigger: TGCGCCGCATCGTGAGTAGCATCGTCCACCAGAAGA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAACTCCATCATGGCCATaGTCCCTATGTGTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTTPSWP*SLCVGS
Trigger: TGACCCGACACATAGGGAGCATGGCCATGATGGAGT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAACCAGAGAAGCTACATaGTCGTCAGTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQATREAT*SSVPAR
Trigger: CCTGGCTGGAACTGACGAGCATGTAGCTTCTCTGGT...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTGGAGCATGCCACATTaGAGAGCTCGGTCACTCTAT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCWSMPH*RARSLY
Trigger: ATAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTATGAGAAGGAGGCCATaGCTACCTGGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFMRRRP*LPGSEK
Trigger: CTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCAT...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATCTTTGTCTGGATCATaGCCATGCTCCCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGSLSGS*PCSLCV
Trigger: GACACATAGGGAGCATGGCCATGATCCAGACAAAGA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263351.9
CDS-3UTR CCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTCTTGGTCTTTAACTTaGGAGTTGGATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSWSLT*ELDGGW
Trigger: CCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCATGGAAAAATGCCCTaGCTCTCTGCACTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSHGKMP*LSALPN
Trigger: GTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCACTGGAAGGGCTTCACTaGCCACTTCACCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQALEGLH*PLHPDD
Trigger: ATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAG...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATCCTCTTCCTTTAGCTaGAAGGGCTTCACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQASSSFS*KGFTGH
Trigger: GTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACCTCCTGCCTATCTGTaGCCAAATGCCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTPPAYL*PNALHV
Trigger: AACATGGAGGGCATTTGGCCACAGATAGGCAGGAGG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGAAGGGGTCTTCTGGTaGACGATGCTACTCACGATG +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAEGVFW*TMLLTM
Trigger: CATCGTGAGTAGCATCGTCCACCAGAAGACCCCTTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCACCCTGGATTCTGCTaGATATTGTCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSHPGFC*ILSAWT
Trigger: AGTCCAAGCTGACAATATTCAGCAGAATCCAGGGTG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCAACAAACACGTTGTTaGCTTTGCTTTTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCQQTRC*LCFWDS
Trigger: GCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACAACAAACACGTTGTTaGCTTTGCTTTTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGQQTRC*LCFWDS
Trigger: GCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAATCATCTGGAACACCTaGATCTGCTCGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAIIWNT*ICSWLT
Trigger: TGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGAT...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCTGGCTGCAGTTCTTaGAGACAAAAGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSGCSS*RQKCSW
Trigger: CCAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCCTGTCTTAGCGGCTTaGAAAACTCTGTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSPVLAA*KTLCQT
Trigger: TGTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGACTTGGTGATCATCTaGAACACCTGCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTDLVII*NTCICS
Trigger: CGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTC...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTTCACACTCTCTGCATaGAAAAATGCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGFTLSA*KNALAL
Trigger: GAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCACGGTGCCGCTTCATATaGGCATTTCGACTCTTGATC +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQARCRFI*AFRLLI
Trigger: GATCAAGAGTCGAAATGCCCATATGAAGCGGCACCG...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCACACCCTGGATTCTGCTaGATATTGTCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAHPGFC*ILSAWT
Trigger: AGTCCAAGCTGACAATATTCAGCAGAATCCAGGGTG...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGGGCATTTCGACTCTTaGTCTTGTCAAACACCCTTT +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSGHFDS*SCQTPF
Trigger: AAAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGGCATTTCGACTCTTaGTCTTGTCAAACACCCTTT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGHFDS*SCQTPF
Trigger: AAAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATATGTGGCTCAATGCTaGTTTTGGTGTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGYVAQC*FWCHPS
Trigger: TGAAGGATGACACCAAAATCAGCATTGAGCCACATA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTCTATCCTGTGTCTCTaGGCTGATCATCATATCTCC +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSILCL*ADHHIS
Trigger: GGAGATATGATGATCAGCTCAGAGACACAGGATAGA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACCTGTCTTAGCGGCTTaGAAAACTCTGTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTPVLAA*KTLCQT
Trigger: TGTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCCCTTTCACACTCTCTaGATGGAAAAATGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFPFHTL*MEKCPG
Trigger: GCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAGGG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCTTGGTCTTTAACTTaGGAGTTGGATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSWSLT*ELDGGW
Trigger: CCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACCCTCCTATAACTCTTaGTCTTTAACTTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGPSYNS*SLTWEL
Trigger: CAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGG...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCCCTCCTATAACTCTTaGTCTTTAACTTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGPSYNS*SLTWEL
Trigger: CAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGG...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCACCCTGGATTCTGCTaGATATTGTCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFHPGFC*ILSAWT
Trigger: AGTCCAAGCTGACAATATTCAGCAGAATCCAGGGTG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGGCATTTCGACTCTTaGTCTTGTCAAACACCCTTT +
Preference number: 4 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAGHFDS*SCQTPF
Trigger: AAAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR TCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTATGTGGCTCAATGCTaGTTTTGGTGTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSYVAQC*FWCHPS
Trigger: TGAAGGATGACACCAAAATCAGCATTGAGCCACATA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGAAAACACATGTGGCTaGTCAGCCCTTTCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFENTCG*SALSPY
Trigger: ATACGGAGAAAGGGCTGAGCAGCCACATGTGTTTTC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCCTGTCTTAGCGGCTTaGAAAACTCTGTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFPVLAA*KTLCQT
Trigger: TGTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCCCTCCTATAACTCTTaGTCTTTAACTTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCPSYNS*SLTWEL
Trigger: CAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTTCACACTCTCTGCATaGAAAAATGCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFFTLSA*KNALAL
Trigger: GAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGCTACCGTCTTTGTCTaGATCATCTTGTGTATCAAG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGATVFV*IILCIK
Trigger: CTTGATACACAAGATGATCCAGACAAAGACGGTAGC...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGCTACCGTCTTTGTCTaGATCATCTTGTGTATCAAG +
Preference number: 4 (lower is better)
Translates to: HSCPTTELLLPICGQMPSATVFV*IILCIK
Trigger: CTTGATACACAAGATGATCCAGACAAAGACGGTAGC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCAAAAACACCGAACAATaGAGAATTCATCGCAAGACT +
Preference number: 4 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCKNTEQ*RIHRKT
Trigger: AGTCTTGCGATGAATTCTGCATTGTTCGGTGTTTTT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGTATAAAACATCTGGCTaGAGTTCTTGCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGYKTSG*SSCRQK
Trigger: CTTTTGTCTGCAAGAACTGCAGCCAGATGTTTTATA...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAAAAACACCGAACAATaGAGAATTCATCGCAAGACT +
Preference number: 4 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGKNTEQ*RIHRKT
Trigger: AGTCTTGCGATGAATTCTGCATTGTTCGGTGTTTTT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATCCTATATTGATATGTaGCTCAATGCTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: GRDYEPKESGASSTTGQGSYIDM*LNADFG
Trigger: ACCAAAATCAGCATTGAGCCACATATCAATATAGGA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATATAAAACATCTGGCTaGAGTTCTTGCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTYKTSG*SSCRQK
Trigger: CTTTTGTCTGCAAGAACTGCAGCCAGATGTTTTATA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CCA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTCCTATATTGATATGTaGCTCAATGCTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSYIDM*LNADFG
Trigger: ACCAAAATCAGCATTGAGCCACATATCAATATAGGA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTATAAAACATCTGGCTaGAGTTCTTGCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFYKTSG*SSCRQK
Trigger: CTTTTGTCTGCAAGAACTGCAGCCAGATGTTTTATA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR GCA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTAAAAACACCGAACAATaGAGAATTCATCGCAAGACT +
Preference number: 4 (lower is better)
Translates to: CPTTELLLPICGQMPSMFKNTEQ*RIHRKT
Trigger: AGTCTTGCGATGAATTCTGCATTGTTCGGTGTTTTT...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp GGGCCAGCACTCCGCGGTGGACCGGGCCTGGAGCAGCGCGGTATCTaGCTCCGGCTCTGGCGGGTCGGGGGCGCCGTTCTCGGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: GPALRGGPGLEQRGI*LRLWRVGGAVLGGP
Trigger: AGGGCCGCCGAGAACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGCGGAGTGCTGGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp CGCGGTGGACCGGGCCTGGAGCAGCGCGGTATCTGGCTCCGGCTCTaGCGGGTCGGGGGCGCCGTTCTCGGCGGCCCTGGAATTAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGGPGLEQRGIWLRL*RVGGAVLGGPGIRG
Trigger: GCCCCTAATTCCAGGGCCGCCGAGAACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp AGCGGCGAGGCATCCGCAGGGAGCCCGCCTGCCTTCTGGGCCTCCTaGAGGCCGGGCTCCCCGGGGTTCTGGCACAGGAAGGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: SGEASAGSPPAFWAS*RPGSPGFWHRKESQ
Trigger: CTGCGACTCCTTCCTGTGCCAGAACCCCGGGGAGCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCGGATGCCTCGCCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TGGCGGAAGAGCGGCGAGGCATCCGCAGGGAGCCCGCCTGCCTTCTaGGCCTCCTGGAGGCCGGGCTCCCCGGGGTTCTGGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: WRKSGEASAGSPPAF*ASWRPGSPGFWHRK
Trigger: CTTCCTGTGCCAGAACCCCGGGGAGCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCGGATGCCTCGCCGCTCTTCCGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TTCAGGAGGCAGTCCACCAGGAACATGGGTGACCGCAGGCGGCTCTaGTGGCATCCTGCAGGGCCAGGCTCCCCAGCCGTGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: FRRQSTRNMGDRRRL*WHPAGPGSPAVEGG
Trigger: CCCACCCTCCACGGCTGGGGAGCCTGGCCCTGCAGGATGCCACCAGAGCCGCCTGCGGTCACCCATGTTCCTGGTGGACTGCCTCCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp CCATCTTCGCCTTCTCTTTCCGGAAGCCGGAGAATCGCGGGGCCCTaGGGTTGCCCAAGAGCCGGTAGCCTCCACCCCGGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PSSPSLSGSRRIAGP*GCPRAGSLHPGSRL
Trigger: CAGCCTGCTCCCGGGGTGGAGGCTACCGGCTCTTGGGCAACCCCAGGGCCCCGCGATTCTCCGGCTTCCGGAAAGAGAAGGCGAAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp CAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTGGCTCGATGGCTaGGAACTGGCAGGGACCGTCTGGCCTCGGAAGAGAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QPGRFRSHWKLWLDG*ELAGTVWPRKRGRQ
Trigger: CTGCCTGCCTCTCTTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp GGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTGGCTCGATaGCTGGGAACTGGCAGGGACCGTCTGGCCTCGGAAGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTARQVPEPLEAVAR*LGTGRDRLASEERQ
Trigger: CTGCCTCTCTTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp CAGGGCGGCTGGTTTGCCCTCGGGCGCAGGGAGCTGGGAGGAGACTaGTGCCACCTGGGCATGGGAGAAGATCCGCTGGGACTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: QGGWFALGRRELGGD*CHLGMGEDPLGLGD
Trigger: ATCACCAAGTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp CCTGGCAGCGAGGCTCCTGGTGGCTCCTCCCCACCTAACTGGGTCTaGCGTTGGCCTGTGGAGGGGAAGATGTCCTCCAGGTCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: PGSEAPGGSSPPNWV*RWPVEGKMSSRSKV
Trigger: GACCTTGGACCTGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGCCACCAGGAGCCTCGCTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TGCTTCCCTGGCAGCGAGGCTCCTGGTGGCTCCTCCCCACCTAACTaGGTCTGCCGTTGGCCTGTGGAGGGGAAGATGTCCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CFPGSEAPGGSSPPN*VCRWPVEGKMSSRS
Trigger: GGACCTGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGCCACCAGGAGCCTCGCTGCCAGGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp TGCCCTGAGCCTCGTGCAGGCAGTGCAGAGCGAGCTCCAGGTTGGTaGCCCCTCCTGGCATCACGCTGGAGCATGCCACATTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CPEPRAGSAERAPGW*PLLASRWSMPHCRA
Trigger: AGCTCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCGCTCTGCACTGCCTGCACGAGGCTCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TTGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTaGCTCGATGGCTGGGAACTGGCAGGGACCGTCTGGCCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLGQPGRFRSHWKL*LDGWELAGTVWPRK
Trigger: CTTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp GGGAGCACTGGAATAAGCCCTTCAGGAGGCAGTCCACCAGGAACATaGGTGACCGCAGGCGGCTCTGGTGGCATCCTGCAGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GSTGISPSGGSPPGT*VTAGGSGGILQGQA
Trigger: AGCCTGGCCCTGCAGGATGCCACCAGAGCCGCCTGCGGTCACCCATGTTCCTGGTGGACTGCCTCCTGAAGGGCTTATTCCAGTGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp CGTTGCCCTGAGCCTCGTGCAGGCAGTGCAGAGCGAGCTCCAGGTTaGTGCCCCCTCCTGGCATCACGCTGGAGCATGCCACATTGCAGA +
Preference number: 5 (lower is better)
Translates to: RCPEPRAGSAERAPG*CPLLASRWSMPHCR
Trigger: TCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCGCTCTGCACTGCCTGCACGAGGCTCAGGGCAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAGAGCGAGCTCCAGGTaGGTGCCCCCTCCTGGCATC +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSRASSR*VPPPGI
Trigger: GATGCCAGGAGGGGGCACCAACCTGGAGCTCGCTCT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 90 bp TATTGTCAGCTTGGACTTGGAGGGATCTGCCGGGGGCCCGGCCGATaGGAAGGAGGCCATGGCTACCTGGCTCGGAGAAGCCGCACAGCA +
Preference number: 5 (lower is better)
Translates to: YCQLGLGGICRGPGR*EGGHGYLARRSRTA
Trigger: TGCTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp CCCGCGAGGGCACGGCCGAGGGCTTGTGGACAACAAACACGTTGTTaGCTTTGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: PARARPRACGQQTRC*LCFWDSPAGSGATG
Trigger: TCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCCCTCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp AGCACTGGAGGCCCCATTCGGACTTGCTGCCACGGGAGTCACCACTaGAGGGGGCCGATGTCAGCTCCCAGCTCCTCTTCCTTTAGCTGG +
Preference number: 5 (lower is better)
Translates to: STGGPIRTCCHGSHH*RGPMSAPSSSSFSW
Trigger: CCAGCTAAAGGAAGAGGAGCTGGGAGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCCTCCAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp GGATCTGCCGGGGGCCCGGCCGATGAGAAGGAGGCCATGGCTACCTaGCTCGGAGAAGCCGCACAGCACATATCCATCTTCGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GSAGGPADEKEAMAT*LGEAAQHISIFAFS
Trigger: AGAGAAGGCGAAGATGGATATGTGCTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCCGGCAGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp ACTTGGAGGGATCTGCCGGGGGCCCGGCCGATGAGAAGGAGGCCATaGCTACCTGGCTCGGAGAAGCCGCACAGCACATATCCATCTTCG +
Preference number: 5 (lower is better)
Translates to: TWRDLPGARPMRRRP*LPGSEKPHSTYPSS
Trigger: CGAAGATGGATATGTGCTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCCGGCAGATCCCTCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGAGTCGCAGTCGACCTaGACCTTCTTGGGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSESQST*TFLGAQ
Trigger: CTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACTC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTGGACATGTCAGGCGTaGGGAGGCTGGGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGWTCQA*GGWGPG
Trigger: ACCCGGACCCCAGCCTCCCAACGCCTGACATGTCCA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGAGCGAGCTCCAGGTaGGTGCCCCCTCCTGGCATC +
Preference number: 5 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGRASSR*VPPPGI
Trigger: GATGCCAGGAGGGGGCACCAACCTGGAGCTCGCTCT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGGTGTGTCCGTGGCTaGTGGGGCCCTCGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGRCVRG*WGPRSR
Trigger: TCTGCTCCGAGGGCCCCACAAGCCACGGACACACCT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp CCTCGTAGTGCCGGCGCAGAGAGCGGTAGTCGCAGTAGCTCTTGCTaGAGCCCTGCTCGATGCACACGAAGGGCTTTGTCTTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: PRSAGAESGSRSSSC*SPARCTRRALSSGG
Trigger: CCCACCAGAAGACAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAGCTACTGCGACTACCGCTCTCTGCGCCGGCACTACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp AGCGAGGCTCCTGGTGGCTCCTCCCCACCTAACTGGGTCTGCCGTTaGCCTGTGGAGGGGAAGATGTCCTCCAGGTCCAAGGTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: SEAPGGSSPPNWVCR*PVEGKMSSRSKVPL
Trigger: TAAAGGGACCTTGGACCTGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGCCACCAGGAGCCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TTGTTGCCTTTGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTaGAAGCTGTGGCTCGATGGCTGGGAACTGGCAGGGACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: LLPLLLGQPGRFRSH*KLWLDGWELAGTVW
Trigger: CCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCATTGTCAGCTTGGACTaGGAGGGATCTGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSIVSLD*EGSAGG
Trigger: GCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAAT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCAGCTCGGGGGTCCGCTaGGAGCCTGCATTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCSSGVR*EPAFGL
Trigger: CAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGCTCGGGGGTCCGCTaGGAGCCTGCATTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGSSGVR*EPAFGL
Trigger: CAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGGACATGTCAGGCGTaGGGAGGCTGGGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCWTCQA*GGWGPG
Trigger: ACCCGGACCCCAGCCTCCCAACGCCTGACATGTCCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp GGACCTCGTAGTGCCGGCGCAGAGAGCGGTAGTCGCAGTAGCTCTTaGTGCAGCCCTGCTCGATGCACACGAAGGGCTTTGTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GPRSAGAESGSRSSS*CSPARCTRRALSSG
Trigger: ACCAGAAGACAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAGCTACTGCGACTACCGCTCTCTGCGCCGGCACTACGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp CACTGCAGGGGGCCGATGTCAGCTCCCAGCTCCTCTTCCTTTAGCTaGAAGGGCTTCACTGGCCACTTCACCCTGATGATGGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: HCRGPMSAPSSSSFS*KGFTGHFTLMMGST
Trigger: CGTGGAGCCCATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGAGCTGGGAGCTGACATCGGCCCCCTGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp CGGCCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTTGCTTTTaGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: RPRACGQQTRCCLCF*DSPAGSGATGSCGS
Trigger: CGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGGAGTCGCAGTCGACCTaGACCTTCTTGGGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGESQST*TFLGAQ
Trigger: CTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACTC...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCAGAGGTTCCTGCGACTaGAGGAAGAGCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSRGSCD*RKSWRK
Trigger: CTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGTGCTGCAAGGGGCGTaGGAACCGCGGCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: GRDYEPKESGASSTTGQGVLQGA*EPRPLS
Trigger: TGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCAC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGTGCTGCAAGGGGCGTaGGAACCGCGGCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGVLQGA*EPRPLS
Trigger: TGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCAC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGTGCTGCAAGGGGCGTaGGAACCGCGGCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCVLQGA*EPRPLS
Trigger: TGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCAC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCTGTGGGACTGCCGTTTaGCTGGTTACCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLCGTAV*LVTSAC
Trigger: GCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCACA...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAGGCCCCATTCGGACTaGCTGCCACGGGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGRPHSD*LPRESP
Trigger: TGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCCT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAAGGCCCCATTCGGACTaGCTGCCACGGGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGRPHSD*LPRESP
Trigger: TGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCCT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCATGTTTGCAGGCAGGTaGGCCAACAGGGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSMFAGR*ANRGQG
Trigger: TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACAT...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGGACCCAAATCCCGGTaGAGGGTGTCGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGGPKSR*RVSLQL
Trigger: CAACTGCAGCGACACCCTCAACCGGGATTTGGGTCC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAGAAAGCCTCGCGTGTaGGGACCCAAATCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLRKPRV*GPKSRL
Trigger: CAACCGGGATTTGGGTCCCAACACGCGAGGCTTTCT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCGTCCAGAAGTGGGTTTaGAGGGGAACTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSVQKWV*RGTVLP
Trigger: CGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGAC...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp AGGGCACGGCCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTTaGTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RARPRACGQQTRCCL*FWDSPAGSGATGSC
Trigger: ACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp AGCTGGGAGGAGACTGCTGCCACCTGGGCATGGGAGAAGATCCGCTaGGACTTGGTGATCATCTGGAACACCTGCATCTGCTCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SWEETAATWAWEKIR*DLVIIWNTCICSWL
Trigger: GAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp CTCTTGCTGCAGCCCTGCTCGATGCACACGAAGGGCTTTGTCTTCTaGTGGGTGAGCATGTGCCCGGTCAGGTGGTCCTGGCGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: LLLQPCSMHTKGFVF*WVSMCPVRWSWRLK
Trigger: CTTTAAGCGCCAGGACCACCTGACCGGGCACATGCTCACCCACCAGAAGACAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAACACGTTGTTGCCTTaGCTTTTGGGACAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLNTLLP*LLGQPG
Trigger: GCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGGCACGGCCGAGGGCTaGTGGACAACAAACACGTTG +
Preference number: 5 (lower is better)
Translates to: GRDYEPKESGASSTTGQGGTAEG*WTTNTL
Trigger: CAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGTCGACCTTGACCTTCTaGGGGGCGCAGGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGSTLTF*GAQGSS
Trigger: AGATGACCCCTGCGCCCCCAAGAAGGTCAAGGTCGA...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCGACCTTGACCTTCTaGGGGGCGCAGGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSTLTF*GAQGSS
Trigger: AGATGACCCCTGCGCCCCCAAGAAGGTCAAGGTCGA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGAGTCGCAGTCGACCTaGACCTTCTTGGGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSESQST*TFLGAQ
Trigger: CTGCGCCCCCAAGAAGGTCAAGGTCGACTGCGACTC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAGAGGTTCCTGCGACTaGAGGAAGAGCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGRGSCD*RKSWRK
Trigger: CTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGATTGTCAGCTTGGACTaGGAGGGATCTGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGIVSLD*EGSAGG
Trigger: GCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAAT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTGTGGGACTGCCGTTTaGCTGGTTACCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGCGTAV*LVTSAC
Trigger: GCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCACA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTCCAAGGGCTTCTaGGTTCCTGGGGGACTATGC +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGGSKGF*VPGGLC
Trigger: GCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACCC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCGGGTCCAAGGGCTTCTaGGTTCCTGGGGGACTATGC +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCGSKGF*VPGGLC
Trigger: GCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACCC...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAGGCCCCATTCGGACTaGCTGCCACGGGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCRPHSD*LPRESP
Trigger: TGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCCT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGTCCAGAAGTGGGTTTaGAGGGGAACTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGVQKWV*RGTVLP
Trigger: CGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGAC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAAGGTGTGTCCGTGGCTaGTGGGGCCCTCGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTRCVRG*WGPRSR
Trigger: TCTGCTCCGAGGGCCCCACAAGCCACGGACACACCT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 90 bp GCAAAACTCTGTGCCAAACACCTGCGGTTCCTGCTTCCCTCGAGGTaGCGGCCACTGGTCGCTGTGAAAACACATGTGGCTGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: AKLCAKHLRFLLPSR*RPLVAVKTHVAAQP
Trigger: GGGCTGAGCAGCCACATGTGTTTTCACAGCGACCAGTGGCCGTCACCTCGAGGGAAGCAGGAACCGCAGGTGTTTGGCACAGAGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000487275.1
CDS GCA 90 bp ATCATCTGGAACACCTGCATCTGCTCGTGGCTCACAAGAGGTTCCTaGGACTTGAGGAAGAGCTGGCGGAAGAGCGGCGAGGCATCCGCA +
Preference number: 5 (lower is better)
Translates to: IIWNTCICSWLTRGS*DLRKSWRKSGEASA
Trigger: TGCGGATGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp GGTCCCTTTAGAGGATCGCAGCTGCTTGGCCAGAGAAGAGATGTCTaGATTCCTGGAAGGGTCCAGAGACGGTGCTGCAAGGGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: GPFRGSQLLGQRRDV*IPGRVQRRCCKGRW
Trigger: CCAACGCCCCTTGCAGCACCGTCTCTGGACCCTTCCAGGAATCCAGACATCTCTTCTCTGGCCAAGCAGCTGCGATCCTCTAAAGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp ACTGGCGCTGCTGAACACCTTCCCGCACAGGCTGCAGTCCAGAAGTaGGTTTTGAGGGGAACTGTGCTGCCGCTTTCCTTTCCTGGCACT +
Preference number: 5 (lower is better)
Translates to: TGAAEHLPAQAAVQK*VLRGTVLPLSFPGT
Trigger: AGTGCCAGGAAAGGAAAGCGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGACTGCAGCCTGTGCGGGAAGGTGTTCAGCAGCGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGTTGTTGCCTTTGCTTTaGGGACAGCCCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGLLPLL*GQPGRF
Trigger: GAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAA...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCAGAGGTTCCTGCGACTaGAGGAAGAGCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCRGSCD*RKSWRK
Trigger: CTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTGGGTCCAAGGGCTTCTaGGTTCCTGGGGGACTATGC +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCGSKGF*VPGGLC
Trigger: GCATAGTCCCCCAGGAACCAAGAAGCCCTTGGACCC...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAAATGCCCTCCATGTTaGCAGGCAGGTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLKCPPC*QAGWPT
Trigger: TGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGGACAAGGTGTCTAAGTaGTCCTCCAGCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGDKVSK*SSSTSL
Trigger: CAGCGAGGTGCTGGAGGACAACTTAGACACCTTGTC...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCCTGGCGCTTAAAGGCCTaGCTGCAGATTTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: PPAPPDRDCIAVRQLSSSWRLKA*LQILQT
Trigger: CGTCTGCAAAATCTGCAGCAAGGCCTTTAAGCGCCA...GGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 90 bp CCTGGCTGTGTGTCAGGTAGTGCTTGCTCAGAGAACTGGCGCTGCTaGACACCTTCCCGCACAGGCTGCAGTCCAGAAGTGGGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: PGCVSGSACSENWRC*TPSRTGCSPEVGFE
Trigger: CTCAAAACCCACTTCTGGACTGCAGCCTGTGCGGGAAGGTGTTCAGCAGCGCCAGTTCTCTGAGCAAGCACTACCTGACACACAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp CTCTGCACTTCCCAACAGCTCGGGGGTCCGCTTGGAGCCTGCATTTaGGCTGGAGCTGAGGATGGACTCCCTCCTATAACTCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LCTSQQLGGPLGACI*AGAEDGLPPITLGL
Trigger: AAGACCAAGAGTTATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGCACGGCCGAGGGCTaGTGGACAACAAACACGTTG +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAGTAEG*WTTNTL
Trigger: CAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACATCGACCTTGACCTTCTaGGGGGCGCAGGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTSTLTF*GAQGSS
Trigger: AGATGACCCCTGCGCCCCCAAGAAGGTCAAGGTCGA...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGAGGATCGCAGCTGCTaGGCCAGAGAAGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGEDRSC*AREEMS
Trigger: AGACATCTCTTCTCTGGCCAAGCAGCTGCGATCCTC...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAATTGTCAGCTTGGACTaGGAGGGATCTGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTIVSLD*EGSAGG
Trigger: GCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAAT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCACCTGTCTTAGCGGCTaGCAAAACTCTGTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLTCLSG*QNSVPN
Trigger: GTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGGT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTaGGCCAACAGGGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSMFAGR*ANRGQG
Trigger: TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACAT...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGACCCAAATCCCGGTaGAGGGTGTCGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAGPKSR*RVSLQL
Trigger: CAACTGCAGCGACACCCTCAACCGGGATTTGGGTCC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAGAAAGCCTCGCGTGTaGGGACCCAAATCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGRKPRV*GPKSRL
Trigger: CAACCGGGATTTGGGTCCCAACACGCGAGGCTTTCT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGTGGAACAGAGGGTGTaGAAGTACACCCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSVEQRV*KYTPEP
Trigger: GGGCTCTGGGGTGTACTTCAACACCCTCTGTTCCAC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 90 bp GGCTTCACTGGCCACTTCACCCTGATGATGGGCTCCACGTGGTCCTaGAGGCGGTGCCGCTTCATATGGGCATTTCGACTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: GFTGHFTLMMGSTWS*RRCRFIWAFRLLIL
Trigger: CAAGATCAAGAGTCGAAATGCCCATATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCCCATCATCAGGGTGAAGTGGCCAGTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp GTGTCGCTGCAGTTGAGCCCTTGGCTCTCTGAAAATGAAGGGAGGTaGATTTCTGATGGGAGGGCACCCTCGTCTCCAAGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: VSLQLSPWLSENEGR*ISDGRAPSSPRLYW
Trigger: CCAGTACAGCCTTGGAGACGAGGGTGCCCTCCCATCAGAAATGCACCTCCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAGCGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp ATCCGCTGGGACTTGGTGATCATCTGGAACACCTGCATCTGCTCGTaGCTCACAAGAGGTTCCTGCGACTTGAGGAAGAGCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: IRWDLVIIWNTCICS*LTRGSCDLRKSWRK
Trigger: CTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGAACACGTTGTTGCCTTaGCTTTTGGGACAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGNTLLP*LLGQPG
Trigger: GCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGGCACGGCCGAGGGCTaGTGGACAACAAACACGTTG +
Preference number: 5 (lower is better)
Translates to: CPTTELLLPICGQMPSMFGTAEG*WTTNTL
Trigger: CAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAAAGATCCGCTGGGACTaGGTGATCATCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGKIRWD*VIIWNT
Trigger: GGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGAAGATCCGCTGGGACTaGGTGATCATCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGKIRWD*VIIWNT
Trigger: GGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCGAGGATCGCAGCTGCTaGGCCAGAGAAGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSEDRSC*AREEMS
Trigger: AGACATCTCTTCTCTGGCCAAGCAGCTGCGATCCTC...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCATGTGGGACTGCCGTTTaGCTGGTTACCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQACGTAV*LVTSAC
Trigger: GCAGGCAGAGGTAACCAGCAAAACGGCAGTCCCACA...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTCTTTAACTTGGGAGTaGGATGGTGGCTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGSLTWE*DGGWVS
Trigger: AGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAAAATGCCCTCCATGTTaGCAGGCAGGTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGKCPPC*QAGWPT
Trigger: TGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGAAAGGACCCATCCACTaGATCGAGCATGGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGKGPIH*IEHGAD
Trigger: ATCAGCTCCATGCTCGATCAAGTGGATGGGTCCTTT...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCCTGGAGCATGCCACATaGCAGAGCTCGGTCACTCTA +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSLEHAT*QSSVTL
Trigger: TAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCAG...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp GAGAAGATCCGCTGGGACTTGGTGATCATCTGGAACACCTGCATCTaGTCGTGGCTCACAAGAGGTTCCTGCGACTTGAGGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EKIRWDLVIIWNTCI*SWLTRGSCDLRKSW
Trigger: CCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp GCATGGGAGAAGATCCGCTGGGACTTGGTGATCATCTGGAACACCTaGATCTGCTCGTGGCTCACAAGAGGTTCCTGCGACTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: AWEKIRWDLVIIWNT*ICSWLTRGSCDLRK
Trigger: CTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTTCTCCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 90 bp AAACACCCTTTCACACTCTCTGCATGGAAAAATGCCCTGGCTCTCTaGACTTCCCAACAGCTCGGGGGTCCGCTTGGAGCCTGCATTTGG +
Preference number: 5 (lower is better)
Translates to: KHPFTLSAWKNALAL*TSQQLGGPLGACIW
Trigger: CCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAGGGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp TTGGGACCCAAATCCCGGTTGAGGGTGTCGCTGCAGTTGAGCCCTTaGCTCTCTGAAAATGAAGGGAGGTGCATTTCTGATGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGPKSRLRVSLQLSP*LSENEGRCISDGRA
Trigger: TGCCCTCCCATCAGAAATGCACCTCCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAGCGACACCCTCAACCGGGATTTGGGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAAACACGTTGTTGCCTTaGCTTTTGGGACAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQANTLLP*LLGQPG
Trigger: GCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTT...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGAGGATCGCAGCTGCTaGGCCAGAGAAGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAEDRSC*AREEMS
Trigger: AGACATCTCTTCTCTGGCCAAGCAGCTGCGATCCTC...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCCTGAATATTGTCAGCTaGGACTTGGAGGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCLNIVS*DLEGSA
Trigger: GGCAGATCCCTCCAAGTCCAAGCTGACAATATTCAG...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCATCTGGCTGCAGTTCTaGCAGACAAAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCIWLQF*QTKVLL
Trigger: CAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGAT...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAATCTGGCTGCAGTTCTaGCAGACAAAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GRDYEPKESGASSTTGQGIWLQF*QTKVLL
Trigger: CAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGAT...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAACCTGTCTTAGCGGCTaGCAAAACTCTGTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGTCLSG*QNSVPN
Trigger: GTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGGT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGATCTTTAACTTGGGAGTaGGATGGTGGCTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGSLTWE*DGGWVS
Trigger: AGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGA...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTGGCGCTTAAAGGCCTaGCTGCAGATTTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCWRLKA*LQILQT
Trigger: CGTCTGCAAAATCTGCAGCAAGGCCTTTAAGCGCCA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGTGGAACAGAGGGTGTaGAAGTACACCCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: CPTTELLLPICGQMPSMFVEQRV*KYTPEP
Trigger: GGGCTCTGGGGTGTACTTCAACACCCTCTGTTCCAC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAAAAGGACCCATCCACTaGATCGAGCATGGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: CGQMPSMFAGRLANRGQGKGPIH*IEHGAD
Trigger: ATCAGCTCCATGCTCGATCAAGTGGATGGGTCCTTT...TCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGGGCTCAATGCTGATTTaGGTGTCATCCTTCACCACA +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGGSMLI*VSSFTT
Trigger: TGTGGTGAAGGATGACACCAAAATCAGCATTGAGCC...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTCCAGCACCACCGGACAGGGACTGCATAGCTGTCCGACAACTGAGCTCCTCAACCGGCTTCCTATATaGATATGTGGCTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: ASSTTGQGLHSCPTTELLNRLPI*ICGSML
Trigger: CAGCATTGAGCCACATATCAATATAGGAAGCCGGTT...GAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACTGGAGCATGCCACATaGCAGAGCTCGGTCACTCTA +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTLEHAT*QSSVTL
Trigger: TAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCAG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp CTGATCATCATATCTCCCCATGGCTTCCAGACCAGAGAAGCTACATaGTCGTCAGTTCCAGCCAGGGATCTCTCCTGGAGTTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: LIIISPHGFQTREAT*SSVPARDLSWSSGI
Trigger: GATCCCGGAACTCCAGGAGAGATCCCTGGCTGGAACTGACGAGCATGTAGCTTCTCTGGTCTGGAAGCCATGGGGAGATATGATGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 90 bp ATCTTGTCAAACACCCTTTCACACTCTCTGCATGGAAAAATGCCCTaGCTCTCTGCACTTCCCAACAGCTCGGGGGTCCGCTTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ILSNTLSHSLHGKMP*LSALPNSSGVRLEP
Trigger: AGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAGGGTGTTTGACAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTTTGTTGCCTTTGCTTTaGGGACAGCCCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLLPLL*GQPGRF
Trigger: GAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAA...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAAAGATCCGCTGGGACTaGGTGATCATCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQAKIRWD*VIIWNT
Trigger: GGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTT...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGATCTGGCTGCAGTTCTaGCAGACAAAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: CLSVAKCPPCLQAGWPTGIWLQF*QTKVLL
Trigger: CAGGAGCACTTTTGTCTGCAAGAACTGCAGCCAGAT...CCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAACTGAGCTACCGTCTTaGTCTGGATCATGGCCATGC +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTTELPS*SGSWPC
Trigger: GCATGGCCATGATCCAGACAAAGACGGTAGCTCAGT...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263351.9
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTCTTTAACTTGGGAGTaGGATGGTGGCTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCSLTWE*DGGWVS
Trigger: AGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGA...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTCTCTTGGTCTTTAACTaGGGAGTTGGATGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCLLVFN*GVGWWL
Trigger: CAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAG...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTGGGCATTTCGACTCTaGATCTTGTCAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGWAFRL*ILSNTL
Trigger: AAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCCA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGACAAGGTGTCTAAGTaGTCCTCCAGCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: CPTTELLLPICGQMPSMFDKVSK*SSSTSL
Trigger: CAGCGAGGTGCTGGAGGACAACTTAGACACCTTGTC...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGAGGCTCAATGCTGATTTaGGTGTCATCCTTCACCACA +
Preference number: 5 (lower is better)
Translates to: GRDYEPKESGASSTTGQGGSMLI*VSSFTT
Trigger: TGTGGTGAAGGATGACACCAAAATCAGCATTGAGCC...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGACTGAGCTACCGTCTTaGTCTGGATCATCTTGTGTA +
Preference number: 5 (lower is better)
Translates to: LWPNALHVCRQVGQQGTGTELPS*SGSSCV
Trigger: TACACAAGATGATCCAGACAAAGACGGTAGCTCAGT...CCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 90 bp CCCTCCTATAACTCTTGGTCTTTAACTTGGGAGTTGGATGGTGGCTaGGTCTCTCCCGAGGGCTGCATGGGACCTTTTCCTCTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: PSYNSWSLTWELDGG*VSPEGCMGPFPLSF
Trigger: AAAGGACAGAGGAAAAGGTCCCATGCAGCCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS-3UTR CAA 90 bp TATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACACTGAATATTGTCAGCTaGGACTTGGAGGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: YLWPNALHVCRQVGQQGTLNIVS*DLEGSA
Trigger: GGCAGATCCCTCCAAGTCCAAGCTGACAATATTCAG...TGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAACCTGTCTTAGCGGCTaGCAAAACTCTGTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: QLSSSCLSVAKCPPCLQATCLSG*QNSVPN
Trigger: GTTTGGCACAGAGTTTTGCAAGCCGCTAAGACAGGT...TGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp AAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACAGGGAGGGTGGGTTTCGACTCTTGATCTaGTCAAACACCCTTTCACAC +
Preference number: 5 (lower is better)
Translates to: KCPPCLQAGWPTGDREGGFRLLI*SNTLSH
Trigger: GTGTGAAAGGGTGTTTGACAAGATCAAGAGTCGAAA...CCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGACTGCTGGGCATTTCGACTCTaGATCTTGTCAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: ETMNLRRVEPPAPPDRDCWAFRL*ILSNTL
Trigger: AAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCCA...GCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCCTATCTGTGGCCAAATGCCCTCCATGTTTGCAGGCAGGTTGGCCAACAGGGGACTGAGCTACCGTCTTaGTCTGGATCATCTTGTGTA +
Preference number: 5 (lower is better)
Translates to: AYLWPNALHVCRQVGQQGTELPS*SGSSCV
Trigger: TACACAAGATGATCCAGACAAAGACGGTAGCTCAGT...CCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 90 bp CTCGTCAGTTCCAGCCAGGGATCTCTCCTGGAGTTCCGGGATCTCTaGCTGAAACCGGCTTCCTATATTGATATGTGGCTCAATGCTGAT +
Preference number: 5 (lower is better)
Translates to: LVSSSQGSLLEFRDL*LKPASYIDMWLNAD
Trigger: ATCAGCATTGAGCCACATATCAATATAGGAAGCCGGTTTCAGGCAGAGATCCCGGAACTCCAGGAGAGATCCCTGGCTGGAACTGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000487275.1
ENST00000595558.1
CDS-3UTR CAA 90 bp TGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTTTCTCTTGGTCTTTAACTaGGGAGTTGGATGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CPTTELLLPICGQMPSMFLLVFN*GVGWWL
Trigger: CAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAG...AAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GGGAGAGACTATGAACCTAAGGAGAGTGGAGCCTCCAGCACCACCGGACAGGGATTTCGACTCTTGATCTaGTCAAACACCCTTTCACAC +
Preference number: 5 (lower is better)
Translates to: GRDYEPKESGASSTTGQGFRLLI*SNTLSH
Trigger: GTGTGAAAGGGTGTTTGACAAGATCAAGAGTCGAAA...TCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp CATAGCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCTGGGCATTTCGACTCTaGATCTTGTCAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: HSCPTTELLLPICGQMPSWAFRL*ILSNTL
Trigger: AAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCCA...GGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS-3UTR CAA 90 bp GCTGTCCGACAACTGAGCTCCTCCTGCCTATCTGTGGCCAAATGCCCTCCATGTAACCGGCTTCCTATATaGATATGTGGCTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: AVRQLSSSCLSVAKCPPCNRLPI*ICGSML
Trigger: CAGCATTGAGCCACATATCAATATAGGAAGCCGGTT...ACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp CCGGGCCTGGAGCAGCGCGGTATCTGGCTCCGGCTCTaGCGGGTCGGGGGCGCCGTTCTCGGCGGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGLEQRGIWLRL*RVGGAVLGGPG
Trigger: TCCAGGGCCGCCGAGAACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTCCAGGCCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp AGCGGCGAGGCATCCGCAGGGAGCCCGCCTGCCTTCTaGGCCTCCTGGAGGCCGGGCTCCCCGGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SGEASAGSPPAF*ASWRPGSPGFW
Trigger: CCAGAACCCCGGGGAGCCCGGCCTCCAGGAGGCCCAGAAGGCAGGCGGGCTCCCTGCGGATGCCTCGCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CTGCGGCCACGGCCCCTGCAGCGGCCTCAGGGCGGCTaGTTTGCCCTCGGGCGCAGGGAGCTGGGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: LRPRPLQRPQGG*FALGRRELGGD
Trigger: GTCTCCTCCCAGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTGAGGCCGCTGCAGGGGCCGTGGCCGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CTCCGCGGTGGACCGGGCCTGGAGCAGCGCGGTATCTaGCTCCGGCTCTGGCGGGTCGGGGGCGCCGTTCTC +
Preference number: 6 (lower is better)
Translates to: LRGGPGLEQRGI*LRLWRVGGAVL
Trigger: GAGAACGGCGCCCCCGACCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGCGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp CCGCCTTCGGGCCAGCACTCCGCGGTGGACCGGGCCTaGAGCAGCGCGGTATCTGGCTCCGGCTCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: PPSGQHSAVDRA*SSAVSGSGSGG
Trigger: CCCGCCAGAGCCGGAGCCAGATACCGCGCTGCTCCAGGCCCGGTCCACCGCGGAGTGCTGGCCCGAAGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp GCCACGGCCCCTGCAGCGGCCTCAGGGCGGCTGGTTTaGCCTCGGGCGCAGGGAGCTGGGAGGAGACTGCTG +
Preference number: 6 (lower is better)
Translates to: ATAPAAASGRLV*PRAQGAGRRLL
Trigger: CAGCAGTCTCCTCCCAGCTCCCTGCGCCCGAGGGCAAACCAGCCGCCCTGAGGCCGCTGCAGGGGCCGTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CCTTCTCTTTCCGGAAGCCGGAGAATCGCGGGGCCCTaGGGTTGCCCAAGAGCCGGTAGCCTCCACCCCGGG +
Preference number: 6 (lower is better)
Translates to: PSLSGSRRIAGP*GCPRAGSLHPG
Trigger: CCCGGGGTGGAGGCTACCGGCTCTTGGGCAACCCCAGGGCCCCGCGATTCTCCGGCTTCCGGAAAGAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CCCGCCGGGGCTGGGCCAGGAGAAGGGGTCTTCTGGTaGACGATGCTACTCACGATGCGGCGCAGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PAGAGPGEGVFW*TMLLTMRRRRS
Trigger: GGACCTCCTGCGCCGCATCGTGAGTAGCATCGTCCACCAGAAGACCCCTTCTCCTGGCCCAGCCCCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp GGGCTGGGCCAGGAGAAGGGGTCTTCTGGTGGACGATaGTACTCACGATGCGGCGCAGGAGGTCCCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GLGQEKGSSGGR*YSRCGAGGPGG
Trigger: CCCACCGGGACCTCCTGCGCCGCATCGTGAGTAGCATCGTCCACCAGAAGACCCCTTCTCCTGGCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp GCCGTGGAGGGTGGGGGCCGCTTCTTCCGCTTTCTCTaGTGGCTGCTCTCCTTGCTGTCTCGCTCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: AVEGGGRFFRFL*WLLSLLSRSSP
Trigger: CGGGGAGGAGCGAGACAGCAAGGAGAGCAGCCAGCAGAGAAAGCGGAAGAAGCGGCCCCCACCCTCCACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTaGCTCGATGGCTGGGAACTGGCAGGGACCGTCTGG +
Preference number: 6 (lower is better)
Translates to: GQPGRFRSHWKL*LDGWELAGTVW
Trigger: CCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 72 bp CTTGGACTTGGAGGGATCTGCCGGGGGCCCGGCCGATaGGAAGGAGGCCATGGCTACCTGGCTCGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: LGLGGICRGPGR*EGGHGYLARRS
Trigger: GCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCCGGCAGATCCCTCCAAGTCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp TGGTTTGCCCTCGGGCGCAGGGAGCTGGGAGGAGACTaGTGCCACCTGGGCATGGGAGAAGATCCGCTGGGA +
Preference number: 6 (lower is better)
Translates to: WFALGRRELGGD*CHLGMGEDPLG
Trigger: TCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGCAGTCTCCTCCCAGCTCCCTGCGCCCGAGGGCAAACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp GGCCCCATTCGGACTTGCTGCCACGGGAGTCACCACTaGAGGGGGCCGATGTCAGCTCCCAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GPIRTCCHGSHH*RGPMSAPSSSS
Trigger: GGAAGAGGAGCTGGGAGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp GAGAAGGGGTCTTCTGGTGGACGATGCTACTCACGATaGGGCGCAGGAGGTCCCGGTGGGGCAGGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: EKGSSGGRCYSR*GAGGPGGAGGS
Trigger: GCTCCCTCCTGCCCCACCGGGACCTCCTGCGCCGCATCGTGAGTAGCATCGTCCACCAGAAGACCCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp GGCAGCGAGGCTCCTGGTGGCTCCTCCCCACCTAACTaGGTCTGCCGTTGGCCTGTGGAGGGGAAGATGTCC +
Preference number: 6 (lower is better)
Translates to: GSEAPGGSSPPN*VCRWPVEGKMS
Trigger: GGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGCCACCAGGAGCCTCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GGAGCCACTGGAAGCTGTGGCTCGATGGCTGGGAACTaGCAGGGACCGTCTGGCCTCGGAAGAGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GATGSCGSMAGN*QGPSGLGREAG
Trigger: GCCTGCCTCTCTTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp CGGCAGGTTCCGGAGCCACTGGAAGCTGTGGCTCGATaGCTGGGAACTGGCAGGGACCGTCTGGCCTCGGAA +
Preference number: 6 (lower is better)
Translates to: RQVPEPLEAVAR*LGTGRDRLASE
Trigger: TTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp CCTCGTGCAGGCAGTGCAGAGCGAGCTCCAGGTTGGTaGCCCCTCCTGGCATCACGCTGGAGCATGCCACAT +
Preference number: 6 (lower is better)
Translates to: PRAGSAERAPGW*PLLASRWSMPH
Trigger: ATGTGGCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCGCTCTGCACTGCCTGCACGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GATCTGCCGGGGGCCCGGCCGATGAGAAGGAGGCCATaGCTACCTGGCTCGGAGAAGCCGCACAGCACATAT +
Preference number: 6 (lower is better)
Translates to: DLPGARPMRRRP*LPGSEKPHSTY
Trigger: ATATGTGCTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCCGGCAGATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CCTGGTGGCTCCTCCCCACCTAACTGGGTCTGCCGTTaGCCTGTGGAGGGGAAGATGTCCTCCAGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: PGGSSPPNWVCR*PVEGKMSSRSK
Trigger: CTTGGACCTGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGCCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GGGGGCCCGGCCGATGAGAAGGAGGCCATGGCTACCTaGCTCGGAGAAGCCGCACAGCACATATCCATCTTC +
Preference number: 6 (lower is better)
Translates to: GGPADEKEAMAT*LGEAAQHISIF
Trigger: GAAGATGGATATGTGCTGTGCGGCTTCTCCGAGCCAGGTAGCCATGGCCTCCTTCTCATCGGCCGGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CCCTGCTCGATGCACACGAAGGGCTTTGTCTTCTGGTaGGTGAGCATGTGCCCGGTCAGGTGGTCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: PCSMHTKGFVFW*VSMCPVRWSWR
Trigger: GCGCCAGGACCACCTGACCGGGCACATGCTCACCCACCAGAAGACAAAGCCCTTCGTGTGCATCGAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp AGGTTCCGGAGCCACTGGAAGCTGTGGCTCGATGGCTaGGAACTGGCAGGGACCGTCTGGCCTCGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RFRSHWKLWLDG*ELAGTVWPRKR
Trigger: TCTCTTCCGAGGCCAGACGGTCCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp TTGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTaGAAGCTGTGGCTCGATGGCTGGGAACTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LLLGQPGRFRSH*KLWLDGWELAG
Trigger: CCCTGCCAGTTCCCAGCCATCGAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 72 bp GCATCTGCTCGTGGCTCACAAGAGGTTCCTGCGACTTaGGGAAGAGCTGGCGGAAGAGCGGCGAGGCATCCG +
Preference number: 6 (lower is better)
Translates to: ASARGSQEVPAT*GRAGGRAARHP
Trigger: CGGATGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp AGTGCCGGCGCAGAGAGCGGTAGTCGCAGTAGCTCTTaGTGCAGCCCTGCTCGATGCACACGAAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: SAGAESGSRSSS*CSPARCTRRAL
Trigger: CAAAGCCCTTCGTGTGCATCGAGCAGGGCTGCAGCAAGAGCTACTGCGACTACCGCTCTCTGCGCCGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp GCTCCTCCCCACCTAACTGGGTCTGCCGTTGGCCTGTaGAGGGGAAGATGTCCTCCAGGTCCAAGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: APPHLTGSAVGL*RGRCPPGPRSL
Trigger: AAGGGACCTTGGACCTGGAGGACATCTTCCCCTCCACAGGCCAACGGCAGACCCAGTTAGGTGGGGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GGGACAAGGTGTCTAAGTTGTCCTCCAGCACCTCGCTaGACATGTCAGGCGTTGGGAGGCTGGGGTCCGGGT +
Preference number: 6 (lower is better)
Translates to: GTRCLSCPPAPR*TCQALGGWGPG
Trigger: ACCCGGACCCCAGCCTCCCAACGCCTGACATGTCCAGCGAGGTGCTGGAGGACAACTTAGACACCTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CAA 72 bp TGGCTCTCTGCACTTCCCAACAGCTCGGGGGTCCGCTaGGAGCCTGCATTTGGGCTGGAGCTGAGGATGGAC +
Preference number: 6 (lower is better)
Translates to: WLSALPNSSGVR*EPAFGLELRMD
Trigger: GTCCATCCTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 90 bp GAGGGCACGGCCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTaGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: EGTAEGLWTTNTLLP*LLGQPGRFRSHWKL
Trigger: CAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp GATGTCTGGATTCCTGGAAGGGTCCAGAGACGGTGCTaGAAGGGGCGTTGGAACCGCGGCCACTTTCAGTCC +
Preference number: 6 (lower is better)
Translates to: DVWIPGRVQRRC*KGRWNRGHFQS
Trigger: GGACTGAAAGTGGCCGCGGTTCCAACGCCCCTTGCAGCACCGTCTCTGGACCCTTCCAGGAATCCAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CGAGCTCCAGGTTGGTGCCCCCTCCTGGCATCACGCTaGAGCATGCCACATTGCAGAGCTCGGTCACTCTAT +
Preference number: 6 (lower is better)
Translates to: RAPGWCPLLASR*SMPHCRARSLY
Trigger: ATAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAACCTGGAGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 72 bp TGCATCTGCTCGTGGCTCACAAGAGGTTCCTGCGACTaGAGGAAGAGCTGGCGGAAGAGCGGCGAGGCATCC +
Preference number: 6 (lower is better)
Translates to: CICSWLTRGSCD*RKSWRKSGEAS
Trigger: GGATGCCTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 90 bp AAAATGCCCTGGCTCTCTGCACTTCCCAACAGCTCGGGGGTCCGCTaGGAGCCTGCATTTGGGCTGGAGCTGAGGATGGACTCCCTCCTA +
Preference number: 6 (lower is better)
Translates to: KMPWLSALPNSSGVR*EPAFGLELRMDSLL
Trigger: TAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 90 bp GCTGCTGAACACCTTCCCGCACAGGCTGCAGTCCAGAAGTGGGTTTaGAGGGGAACTGTGCTGCCGCTTTCCTTTCCTGGCACTCCCCGA +
Preference number: 6 (lower is better)
Translates to: AAEHLPAQAAVQKWV*RGTVLPLSFPGTPR
Trigger: TCGGGGAGTGCCAGGAAAGGAAAGCGGCAGCACAGTTCCCCTCAAAACCCACTTCTGGACTGCAGCCTGTGCGGGAAGGTGTTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CAA 90 bp ACGGCCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTTGCTTTaGGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAGCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: TAEGLWTTNTLLPLL*GQPGRFRSHWKLWL
Trigger: GAGCCACAGCTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 72 bp GGCCACTTCACCCTGATGATGGGCTCCACGTGGTCCTaGAGGCGGTGCCGCTTCATATGGGCATTTCGACTC +
Preference number: 6 (lower is better)
Translates to: GHFTLMMGSTWS*RRCRFIWAFRL
Trigger: GAGTCGAAATGCCCATATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCCCATCATCAGGGTGAAGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp AACACCTGCATCTGCTCGTGGCTCACAAGAGGTTCCTaGGACTTGAGGAAGAGCTGGCGGAAGAGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: NTCICSWLTRGS*DLRKSWRKSGE
Trigger: CTCGCCGCTCTTCCGCCAGCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp CAGGTTGGTGCCCCCTCCTGGCATCACGCTGGAGCATaGCACATTGCAGAGCTCGGTCACTCTATCCTGTGT +
Preference number: 6 (lower is better)
Translates to: QVGAPSWHHAGA*HIAELGHSILC
Trigger: ACACAGGATAGAGTGACCGAGCTCTGCAATGTGGCATGCTCCAGCGTGATGCCAGGAGGGGGCACCAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CTGGATCATGGCCATGCTCCCTATGTGTCGGGTCACTaGAACCACGGGGATCGATTGGGGGACCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: LDHGHAPYVSGH*NHGDRLGDHQR
Trigger: CCTTTGGTGGTCCCCCAATCGATCCCCGTGGTTCCAGTGACCCGACACATAGGGAGCATGGCCATGATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263351.9
CDS CCA 72 bp TCCCAACAGCTCGGGGGTCCGCTTGGAGCCTGCATTTaGGCTGGAGCTGAGGATGGACTCCCTCCTATAACT +
Preference number: 6 (lower is better)
Translates to: SQQLGGPLGACI*AGAEDGLPPIT
Trigger: AGTTATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CTCCATCATGGCCATGCTCCCTATGTGTCGGGTCACTaGAACCACGGGGATCGATTGGGGGACCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: LHHGHAPYVSGH*NHGDRLGDHQR
Trigger: CCTTTGGTGGTCCCCCAATCGATCCCCGTGGTTCCAGTGACCCGACACATAGGGAGCATGGCCATGATGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS CCA 72 bp TTGTCCCATGGCCATGCTCCCTATGTGTCGGGTCACTaGAACCACGGGGATCGATTGGGGGACCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: LSHGHAPYVSGH*NHGDRLGDHQR
Trigger: CCTTTGGTGGTCCCCCAATCGATCCCCGTGGTTCCAGTGACCCGACACATAGGGAGCATGGCCATGGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391901.7
CDS CAA 72 bp GCCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTaGCTTTTGGGACAGCCCGGCAGGTTCCGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: AEGLWTTNTLLP*LLGQPGRFRSH
Trigger: GTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS CAA 72 bp GCTGCCACCTGGGCATGGGAGAAGATCCGCTGGGACTaGGTGATCATCTGGAACACCTGCATCTGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: AATWAWEKIRWD*VIIWNTCICSW
Trigger: CCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 72 bp CCACCCTGGATTCTGCTGAATATTGTCAGCTTGGACTaGGAGGGATCTGCCGGGGGCCCGGCCGATGAGAAG +
Preference number: 6 (lower is better)
Translates to: PPWILLNIVSLD*EGSAGGPADEK
Trigger: CTTCTCATCGGCCGGGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAATATTCAGCAGAATCCAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 90 bp GAGGAGACTGCTGCCACCTGGGCATGGGAGAAGATCCGCTGGGACTaGGTGATCATCTGGAACACCTGCATCTGCTCGTGGCTCACAAGA +
Preference number: 6 (lower is better)
Translates to: EETAATWAWEKIRWD*VIIWNTCICSWLTR
Trigger: TCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTTCTCCCATGCCCAGGTGGCAGCAGTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 90 bp TGGGTGAGCATGTGCCCGGTCAGGTGGTCCTGGCGCTTAAAGGCCTaGCTGCAGATTTTGCAGACGTGCTTCCTTTCCTGGCTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: WVSMCPVRWSWRLKA*LQILQTCFLSWLCV
Trigger: GACACACAGCCAGGAAAGGAAGCACGTCTGCAAAATCTGCAGCAAGGCCTTTAAGCGCCAGGACCACCTGACCGGGCACATGCTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 72 bp TCCTGCTTCCCTCGAGGTGACGGCCACTGGTCGCTGTaGAAACACATGTGGCTGCTCAGCCCTTTCTCCGTA +
Preference number: 6 (lower is better)
Translates to: SCFPRGDGHWSL*KHMWLLSPFSV
Trigger: TACGGAGAAAGGGCTGAGCAGCCACATGTGTTTTCACAGCGACCAGTGGCCGTCACCTCGAGGGAAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000487275.1
ENST00000595558.1
CDS TCA 72 bp TGTGCCAAACACCTGCGGTTCCTGCTTCCCTCGAGGTaGCGGCCACTGGTCGCTGTGAAAACACATGTGGCT +
Preference number: 6 (lower is better)
Translates to: CAKHLRFLLPSR*RPLVAVKTHVA
Trigger: AGCCACATGTGTTTTCACAGCGACCAGTGGCCGTCACCTCGAGGGAAGCAGGAACCGCAGGTGTTTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000487275.1
CDS TCA 72 bp GTGTCAGGTAGTGCTTGCTCAGAGAACTGGCGCTGCTaGACACCTTCCCGCACAGGCTGCAGTCCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: VSGSACSENWRC*TPSRTGCSPEV
Trigger: CACTTCTGGACTGCAGCCTGTGCGGGAAGGTGTTCAGCAGCGCCAGTTCTCTGAGCAAGCACTACCTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp CCGAGGGCTTGTGGACAACAAACACGTTGTTGCCTTTaGTTTTGGGACAGCCCGGCAGGTTCCGGAGCCACT +
Preference number: 6 (lower is better)
Translates to: PRACGQQTRCCL*FWDSPAGSGAT
Trigger: AGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp TTCACACTCTCTGCATGGAAAAATGCCCTGGCTCTCTaGACTTCCCAACAGCTCGGGGGTCCGCTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: FTLSAWKNALAL*TSQQLGGPLGA
Trigger: GGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GGGCCGATGTCAGCTCCCAGCTCCTCTTCCTTTAGCTaGAAGGGCTTCACTGGCCACTTCACCCTGATGATG +
Preference number: 6 (lower is better)
Translates to: GPMSAPSSSSFS*KGFTGHFTLMM
Trigger: CATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGAGCTGGGAGCTGACATCGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp CTTGATCATGGCCATGCTCCCTATGTGTCGGGTCACTaGAACCACGGGGATCGATTGGGGGACCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: LDHGHAPYVSGH*NHGDRLGDHQR
Trigger: CCTTTGGTGGTCCCCCAATCGATCCCCGTGGTTCCAGTGACCCGACACATAGGGAGCATGGCCATGATCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487275.1
CDS CAA 90 bp CTGCTGGCTGCTCTCCTTGCTGTCTCGCTCCTCCCCGTCTTTCTCTaGTCCCTGAAGAAGTTTAGAACCACAGGTGGTCGCCTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: LLAALLAVSLLPVFL*SLKKFRTTGGRLKP
Trigger: TGGCTTCAGGCGACCACCTGTGGTTCTAAACTTCTTCAGGGACAAGAGAAAGACGGGGAGGAGCGAGACAGCAAGGAGAGCAGCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314121.8
CDS GCA 72 bp CGCTGGGACTTGGTGATCATCTGGAACACCTGCATCTaGTCGTGGCTCACAAGAGGTTCCTGCGACTTGAGG +
Preference number: 6 (lower is better)
Translates to: RWDLVIIWNTCI*SWLTRGSCDLR
Trigger: CCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp AACACCCTTTCACACTCTCTGCATGGAAAAATGCCCTaGCTCTCTGCACTTCCCAACAGCTCGGGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: NTLSHSLHGKMP*LSALPNSSGVR
Trigger: GCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAGGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 72 bp GGCTTGTGGACAACAAACACGTTGTTGCCTTTGCTTTaGGGACAGCCCGGCAGGTTCCGGAGCCACTGGAAG +
Preference number: 6 (lower is better)
Translates to: GLWTTNTLLPLL*GQPGRFRSHWK
Trigger: CTTCCAGTGGCTCCGGAACCTGCCGGGCTGTCCCAAAAGCAAAGGCAACAACGTGTTTGTTGTCCACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
CDS CAA 72 bp ATGTTTCCACCCTGGATTCTGCTGAATATTGTCAGCTaGGACTTGGAGGGATCTGCCGGGGGCCCGGCCGAT +
Preference number: 6 (lower is better)
Translates to: MFPPWILLNIVS*DLEGSAGGPAD
Trigger: ATCGGCCGGGCCCCCGGCAGATCCCTCCAAGTCCAAGCTGACAATATTCAGCAGAATCCAGGGTGGAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 72 bp ATGTGCCCGGTCAGGTGGTCCTGGCGCTTAAAGGCCTaGCTGCAGATTTTGCAGACGTGCTTCCTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: MCPVRWSWRLKA*LQILQTCFLSW
Trigger: CCAGGAAAGGAAGCACGTCTGCAAAATCTGCAGCAAGGCCTTTAAGCGCCAGGACCACCTGACCGGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CAA 90 bp CCTCGCGTGTTGGGACCCAAATCCCGGTTGAGGGTGTCGCTGCAGTaGAGCCCTTGGCTCTCTGAAAATGAAGGGAGGTGCATTTCTGAT +
Preference number: 6 (lower is better)
Translates to: PRVLGPKSRLRVSLQ*SPWLSENEGRCISD
Trigger: ATCAGAAATGCACCTCCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAGCGACACCCTCAACCGGGATTTGGGTCCCAACACGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp AAGATCCGCTGGGACTTGGTGATCATCTGGAACACCTaGATCTGCTCGTGGCTCACAAGAGGTTCCTGCGAC +
Preference number: 6 (lower is better)
Translates to: KIRWDLVIIWNT*ICSWLTRGSCD
Trigger: GTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTCCCAGCGGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS GCA 72 bp CAGTTGAGCCCTTGGCTCTCTGAAAATGAAGGGAGGTaGATTTCTGATGGGAGGGCACCCTCGTCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: QLSPWLSENEGR*ISDGRAPSSPR
Trigger: CCTTGGAGACGAGGGTGCCCTCCCATCAGAAATGCACCTCCCTTCATTTTCAGAGAGCCAAGGGCTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS CCA 72 bp GGATGGACTCCCTCCTATAACTCTTGGTCTTTAACTTaGGAGTTGGATGGTGGCTGGGTCTCTCCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: GWTPSYNSWSLT*ELDGGWVSPEG
Trigger: GCCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGGAGTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS TCA 72 bp TTAAGCACACCTAGCCCCAGGTCTTGTAAGGATGCCTaGGACTCCGAATCTGCGTACTCCTCCAGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LSTPSPRSCKDA*DSESAYSSSSF
Trigger: GAAGCTGCTGGAGGAGTACGCAGATTCGGAGTCTCAGGCATCCTTACAAGACCTGGGGCTAGGTGTGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS GCA 72 bp ATATCTCCCCATGGCTTCCAGACCAGAGAAGCTACATaGTCGTCAGTTCCAGCCAGGGATCTCTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: ISPHGFQTREAT*SSVPARDLSWS
Trigger: ACTCCAGGAGAGATCCCTGGCTGGAACTGACGAGCATGTAGCTTCTCTGGTCTGGAAGCCATGGGGAGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp GACTTGGTGATCATCTGGAACACCTGCATCTGCTCGTaGCTCACAAGAGGTTCCTGCGACTTGAGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: DLVIIWNTCICS*LTRGSCDLRKS
Trigger: GCTCTTCCTCAAGTCGCAGGAACCTCTTGTGAGCCACGAGCAGATGCAGGTGTTCCAGATGATCACCAAGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CAA 72 bp ACTCCCTCCTATAACTCTTGGTCTTTAACTTGGGAGTaGGATGGTGGCTGGGTCTCTCCCGAGGGCTGCATG +
Preference number: 6 (lower is better)
Translates to: TPSYNSWSLTWE*DGGWVSPEGCM
Trigger: CATGCAGCCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1
CDS CCA 72 bp AAATCCCGGTTGAGGGTGTCGCTGCAGTTGAGCCCTTaGCTCTCTGAAAATGAAGGGAGGTGCATTTCTGAT +
Preference number: 6 (lower is better)
Translates to: KSRLRVSLQLSP*LSENEGRCISD
Trigger: ATCAGAAATGCACCTCCCTTCATTTTCAGAGAGCCAAGGGCTCAACTGCAGCGACACCCTCAACCGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314121.8
ENST00000391901.7
CDS TCA 72 bp GAAGGCGGTGCCGCTTCATATGGGCATTTCGACTCTTaGTCTTGTCAAACACCCTTTCACACTCTCTGCATG +
Preference number: 6 (lower is better)
Translates to: EGGAASYGHFDS*SCQTPFHTLCM
Trigger: CATGCAGAGAGTGTGAAAGGGTGTTTGACAAGATCAAGAGTCGAAATGCCCATATGAAGCGGCACCGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263351.9
ENST00000314121.8
ENST00000391901.7
ENST00000595558.1