RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF536 (Homo sapiens)

Ensembl gene IDs: ENSG00000198597

Ensembl transcript IDs: ENST00000355537.4, ENST00000585628.5, ENST00000590564.5, ENST00000591488.1, ENST00000592773.2

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAAGATCTCAATCCTCTGCAGTGCCGGTCAGCCCCGGCGCTGGCTaGGGGCCGTCTAAGGTTTCTCCAAGAGTGCAGTTACAACACCAC +
Preference number: 1 (lower is better)
Translates to: LRSQSSAVPVSPGAG*GPSKVSPRVQLQHH
Trigger: GTGGTGTTGTAACTGCACTCTTGGAGAAACCTTAGACGGCCCGCAGCCAGCGCCGGGGCTGACCGGCACTGCAGAGGATTGAGATCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 90 bp GCGGGCCGTCTAAGGTTTCTCCAAGAGTGCAGTTACAACACCACGTaGATTGATTTTCTCTGCAGTGACCGCTCCAGTCTGACTGGCACC +
Preference number: 1 (lower is better)
Translates to: AGRLRFLQECSYNTT*IDFLCSDRSSLTGT
Trigger: GGTGCCAGTCAGACTGGAGCGGTCACTGCAGAGAAAATCAATTCACGTGGTGTTGTAACTGCACTCTTGGAGAAACCTTAGACGGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 90 bp TCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTAGATaGCACCCTTTTGACAGCATATGCAAACCGGATTCCTTATTAGCC +
Preference number: 1 (lower is better)
Translates to: SKLHSDLIYTETSVR*HPFDSICKPDSLLA
Trigger: GGCTAATAAGGAATCCGGTTTGCATATGCTGTCAAAAGGGTGTCATCTAACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 90 bp CTTCAATCACCATTTTTAAGTTGTAGATGTCAAGGTGCTATTCACTaGAATTTTACTGTCATCTGCTCCTGGTTAATAGGACGACCTGAC +
Preference number: 1 (lower is better)
Translates to: LQSPFLSCRCQGAIH*NFTVICSWLIGRPD
Trigger: GTCAGGTCGTCCTATTAACCAGGAGCAGATGACAGTAAAATTTCAGTGAATAGCACCTTGACATCTACAACTTAAAAATGGTGATTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR TCA 90 bp AAACTTGACATGTTTAGATATGAGAACCTGATGACATTCAGAAACTaGCGCTGCATCACTGTGGCTGTCACTTGTTTGTATTACAAGTTA +
Preference number: 1 (lower is better)
Translates to: KLDMFRYENLMTFRN*RCITVAVTCLYYKL
Trigger: TAACTTGTAATACAAACAAGTGACAGCCACAGTGATGCAGCGTCAGTTTCTGAATGTCATCAGGTTCTCATATCTAAACATGTCAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR TCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTGTGACCGCTCCAGTCTaGCTGGCACCGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVVTAPV*LAPQLP
Trigger: AGGCAGCTGCGGTGCCAGTCAGACTGGAGCGGTCAC...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCACTCAATCCTCTGCAGTaGCGGTCAGCCCCGGCGCTG +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSLNPLQ*RSAPAL
Trigger: CAGCGCCGGGGCTGACCGGCACTGCAGAGGATTGAG...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR TCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGCCTTTGCAATCCATaGCTAATACTGGAACATATG +
Preference number: 2 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTSLCNP*LILEHM
Trigger: CATATGTTCCAGTATTAGTCATGGATTGCAAAGGCT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR-3UTR CCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAAGACGACTTTCGAGTTaGAAGGGCCCCCAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VSQTELLPVASEDAEKTQRRLSS*KGPQLS
Trigger: AGAGAGCTGGGGGCCCTTCCAACTCGAAAGTCGTCT...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTAAGTTTTTAAGGCCCTaGGGTTTAATCTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVKFLRP*GLICAP
Trigger: GGGAGCACAGATTAAACCCCAGGGCCTTAAAAACTT...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAGACTGGCACCGCAGCTaGCTCCCGACACATCTCATT +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSDWHRS*LPTHLI
Trigger: AATGAGATGTGTCGGGAGGCAGCTGCGGTGCCAGTC...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAAAGATCTCAATCCTCTaGAGTGCCGGTCAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSKISIL*SAGQPR
Trigger: CCGGGGCTGACCGGCACTGCAGAGGATTGAGATCTT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCAATGGACATTTGTCTaGAGACACTTCCTGATCATT +
Preference number: 2 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVQWTFV*RHFLII
Trigger: AATGATCAGGAAGTGTCTGCAGACAAATGTCCATTG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCCTTTTGACAGCATATaGAAACCGGATTCCTTATTA +
Preference number: 2 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVPFDSI*KPDSLL
Trigger: TAATAAGGAATCCGGTTTGCATATGCTGTCAAAAGG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR TCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACATGACATTCAGAAACTaGCGCTGCATCACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYMTFRN*RCITVA
Trigger: AGCCACAGTGATGCAGCGTCAGTTTCTGAATGTCAT...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTGTTCTATACACTATTaGGGGGTTGTACATGATTTT +
Preference number: 2 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVCSIHY*GVVHDF
Trigger: AAAATCATGTACAACCCCCCAATAGTGTATAGAACA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCCACCTGCATTGTTTTaGAAGTACTTGTTGCCGGGT +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYPPALF*KYLLPG
Trigger: ACCCGGCAACAAGTACTTCCAAAACAATGCAGGTGG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR TCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACGAAACCTCGGTTAGATaGCACCCTTTTGACAGCATA +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYETSVR*HPFDSI
Trigger: TATGCTGTCAAAAGGGTGTCATCTAACCGAGGTTTC...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCACTGGGGTTTAATCTGTaGTCCCAGCCTGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSLGFNL*SQPARK
Trigger: TTTCCTTGCAGGCTGGGAGCACAGATTAAACCCCAG...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACGACGCTGCATCACTGTaGCTGTCACTTGTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYDAASL*LSLVCI
Trigger: AATACAAACAAGTGACAGCCACAGTGATGCAGCGTC...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR TCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACTCTGCAGACACTTCCTaGTCATTGATTTCATTTGGC +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYSADTS*SLISFG
Trigger: GCCAAATGAAATCAATGATCAGGAAGTGTCTGCAGA...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR GCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCACAAACAGAATTATTaGCTGTCGCATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYHKQNY*LSHLRM
Trigger: CATCCTCAGATGCGACAGGCAATAATTCTGTTTGTG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCACCAGCATCTTCTATaGATGGGGTTAGCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYHQHLL*MGLASF
Trigger: AAAACTAGCTAACCCCATCCATAGAAGATGCTGGTG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTATATATACTGTAGATTaGTGCACCGTGTGTATACAC +
Preference number: 2 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVIYTVD*CTVCIH
Trigger: GTGTATACACACGGTGCACCAATCTACAGTATATAT...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR-3UTR GCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACTGGAGAAGAAAATCTTaGTTCATGTCTGTGACACTT +
Preference number: 2 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYWRRKS*FMSVTL
Trigger: AAGTGTCACAGACATGAAGCAAGATTTTCTTCTCCA...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR CAA 90 bp ACTCTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTaGCTTCAATCACCATTTTTAAGTTGTAGATGTCAAGGTGCTATT +
Preference number: 2 (lower is better)
Translates to: TLFQSTRSPRTSLHI*LQSPFLSCRCQGAI
Trigger: AATAGCACCTTGACATCTACAACTTAAAAATGGTGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR-3UTR TCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAACACTTCCTGATCATTaGTTTCATTTGGCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSTLPDH*FHLAVY
Trigger: ATACACAGCCAAATGAAATCAATGATCAGGAAGTGT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATTCATAAGAGCTTGCTaGAGAAGAAAATCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSFIRAC*RRKSCF
Trigger: GAAGCAAGATTTTCTTCTCCAGCAAGCTCTTATGAA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR GCA 72 bp CAATCCTCTGCAGTGCCGGTCAGCCCCGGCGCTGGCTaGGGGCCGTCTAAGGTTTCTCCAAGAGTGCAGTTA +
Preference number: 3 (lower is better)
Translates to: QSSAVPVSPGAG*GPSKVSPRVQL
Trigger: TAACTGCACTCTTGGAGAAACCTTAGACGGCCCGCAGCCAGCGCCGGGGCTGACCGGCACTGCAGAGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 72 bp CGTGAATTGATTTTCTCTGCAGTGACCGCTCCAGTCTaGCTGGCACCGCAGCTGCCTCCCGACACATCTCAT +
Preference number: 3 (lower is better)
Translates to: RELIFSAVTAPV*LAPQLPPDTSH
Trigger: ATGAGATGTGTCGGGAGGCAGCTGCGGTGCCAGTCAGACTGGAGCGGTCACTGCAGAGAAAATCAATTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCCCACCTGCATTGTTTaGGAAGTACTTGTTGCCGGG +
Preference number: 3 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVPTCIV*EVLVAG
Trigger: CCCGGCAACAAGTACTTCCAAAACAATGCAGGTGGG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR GCA 72 bp AGAAAGCAGCTTGCTCTATGCCAGATGGGTCCAAGTTaGACAGCGACCTCATTTACACTGAAACCTCGGTTA +
Preference number: 3 (lower is better)
Translates to: RKQLALCQMGPS*TATSFTLKPRL
Trigger: TAACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCATAGAGCAAGCTGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTATATATACTGTAGATaGGTGCACCGTGTGTATACA +
Preference number: 3 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTYIYCR*VHRVYT
Trigger: TGTATACACACGGTGCACCAATCTACAGTATATATA...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR-3UTR CAA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCCAAGTTACTAAGCCTTaGCAATCCATGACTAATACT +
Preference number: 3 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTQVTKP*QSMTNT
Trigger: AGTATTAGTCATGGATTGCAAAGGCTTAGTAACTTG...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR TCA 72 bp CACAGCGACCTCATTTACACTGAAACCTCGGTTAGATaGCACCCTTTTGACAGCATATGCAAACCGGATTCC +
Preference number: 3 (lower is better)
Translates to: HSDLIYTETSVR*HPFDSICKPDS
Trigger: GGAATCCGGTTTGCATATGCTGTCAAAAGGGTGTCATCTAACCGAGGTTTCAGTGTAAATGAGGTCGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAAAGACGACTTTCGAGTaGGAAGGGCCCCCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSKTTFE*EGPPAL
Trigger: GAGAGCTGGGGGCCCTTCCAACTCGAAAGTCGTCTT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAAAACAAGAAAGCAGCTaGCTCTATGCCAGATGGGTC +
Preference number: 3 (lower is better)
Translates to: VSQTELLPVASEDAEKTQKQESS*LYARWV
Trigger: GACCCATCTGGCATAGAGCAAGCTGCTTTCTTGTTT...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR GCA 72 bp AAGAGGGGATGTTCCCAGTGTCACAAACAGAATTATTaGCTGTCGCATCTGAGGATGCTGAAAAGACACAAA +
Preference number: 3 (lower is better)
Translates to: KRGCSQCHKQNY*LSHLRMLKRHK
Trigger: TTTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACACTGGGAACATCCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAACAACACCACGTGAATaGATTTTCTCTGCAGTGACC +
Preference number: 3 (lower is better)
Translates to: VSQTELLPVASEDAEKTQTTPRE*IFSAVT
Trigger: GGTCACTGCAGAGAAAATCAATTCACGTGGTGTTGT...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCACCAGATGGGTCCAAGTaGCACAGCGACCTCATTTAC +
Preference number: 3 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSPDGSK*HSDLIY
Trigger: GTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGG...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCATCAGGATTTATGACTTaGAGGGAGTTTTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSSGFMT*REFSLL
Trigger: CAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGA...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR-3UTR CAA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAATTGTTTTGGAAGTACTaGTTGCCGGGTAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: VSQTELLPVASEDAEKTQLFWKY*LPGNSL
Trigger: TAAACTGTTACCCGGCAACAAGTACTTCCAAAACAA...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 72 bp TTTGACAGCATATGCAAACCGGATTCCTTATTAGCCTaGGATTCTTTCTGGTCTCAGGATAGCACTAAGAAT +
Preference number: 3 (lower is better)
Translates to: FDSICKPDSLLA*DSFWSQDSTKN
Trigger: ATTCTTAGTGCTATCCTGAGACCAGAAAGAATCTCAGGCTAATAAGGAATCCGGTTTGCATATGCTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 72 bp ATGTTTAGATATGAGAACCTGATGACATTCAGAAACTaGCGCTGCATCACTGTGGCTGTCACTTGTTTGTAT +
Preference number: 3 (lower is better)
Translates to: MFRYENLMTFRN*RCITVAVTCLY
Trigger: ATACAAACAAGTGACAGCCACAGTGATGCAGCGTCAGTTTCTGAATGTCATCAGGTTCTCATATCTAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATTTTGGAAGTACTTGTaGCCGGGTAACAGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRFWKYL*PGNSLA
Trigger: TGCTAAACTGTTACCCGGCAACAAGTACTTCCAAAA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATTTCTCCCACCTGCATaGTTTTGGAAGTACTTGTTG +
Preference number: 3 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRFLPPA*FWKYLL
Trigger: CAACAAGTACTTCCAAAACAATGCAGGTGGGAGAAA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATGTGTGGTGCAGAACTaGATAAATTTGGAGTATCCA +
Preference number: 3 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSCVVQN*INLEYP
Trigger: TGGATACTCCAAATTTATCAAGTTCTGCACCACACA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR TCA 72 bp CCATTTTTAAGTTGTAGATGTCAAGGTGCTATTCACTaGAATTTTACTGTCATCTGCTCCTGGTTAATAGGA +
Preference number: 3 (lower is better)
Translates to: PFLSCRCQGAIH*NFTVICSWLIG
Trigger: TCCTATTAACCAGGAGCAGATGACAGTAAAATTTCAGTGAATAGCACCTTGACATCTACAACTTAAAAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR TCA 72 bp TTTTACTGTCATCTGCTCCTGGTTAATAGGACGACCTaGCACAATATTAAACTAGCAATATTTCTGCTTAAA +
Preference number: 3 (lower is better)
Translates to: FYCHLLLVNRTT*HNIKLAIFLLK
Trigger: TTTAAGCAGAAATATTGCTAGTTTAATATTGTGTCAGGTCGTCCTATTAACCAGGAGCAGATGACAGTAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTAGGTCCGGCCGGGGCTaGAGCAGGCTGCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSRSGRG*SRLPFS
Trigger: GCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTGCCACCGCGTCCTCCTaGACGCTGGCAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTATASS*TLAGLG
Trigger: GCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGC...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGGCCCAGCCCCGTTCTaGCGCTCCCGATGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTGPAPF*RSRWCR
Trigger: GCGACACCATCGGGAGCGGCAGAACGGGGCTGGGCC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGCGGCGGCACGAGATTaGGGCATCCCAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSAAARD*GIPGGS
Trigger: ACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTACGCTGTGGTTAGCCTaGAGGGCCAGGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSTLWLA*RARVQA
Trigger: CGCCTGCACCCTGGCCCTGCAGGCTAACCACAGCGT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGGGACTCCTGGTCACTaGCCGAGCCACGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSGTPGH*PSHAAH
Trigger: ATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTGCTTCTCCTCGGGGTTaGGCCGGGGATGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTASPRG*AGDGAR
Trigger: CCGAGCTCCATCCCCGGCCCAACCCCGAGGAGAAGC...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGCTTGTCCCGCAGGATaGCGCGCTCCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSACPAG*RAPPAR
Trigger: ACGAGCTGGAGGAGCGCGCCATCCTGCGGGACAAGC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGGGACATGCCGCCCATaGGCACAGGCACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTGTCRP*AQAPRG
Trigger: ACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTTGGCGTGGGCCTCCTaGGACATGCCGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTLAWAS*DMPPMG
Trigger: GCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAA...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGGTGAGACCAGTCCCTaGACGGGCTGGGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSGETSP*TGWEVP
Trigger: AGGCACCTCCCAGCCCGTCCAGGGACTGGTCTCACC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTTGGCATACTGGCCGTTaGGGACGGGGCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSWHTGR*GRGHSG
Trigger: ACCTGAGTGGCCCCGTCCTCAACGGCCAGTATGCCA...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTTTGAGGTTCCCCTTCTaGGCCGCCCTGTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSLRFPF*AALWSQ
Trigger: CTGCGACCACAGGGCGGCGCAGAAGGGGAACCTCAA...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCCATCCCAGGAGGGAGTaGTTGTCCCCCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTHPRRE*LSPSGT
Trigger: CGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATG...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTCCTGCAGCCGCTCGATaGAGCTGGATTTCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSPAAAR*SWISAA
Trigger: CGCCGCTGAAATCCAGCTGCATCGAGCGGCTGCAGG...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTCATCCAGGCCCACGTaGAGCCCATCCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTSSRPT*SPSSSP
Trigger: GGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGGACCTCCGAAGACATaGCCGTGGCCTGCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTGPPKT*PWPAPS
Trigger: ACTCGGGGCAGGCCACGGGCATGTCTTCGGAGGTCC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTACGTCCTCCTGCACGCTaGCAGGCTTGGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLRPPAR*QAWARA
Trigger: TGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACG...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGAGTACAGGTTGGCGTaGGCCTCCTGGGACATGCCG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSEYRLA*ASWDMP
Trigger: CGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTACCCTCCGGGACGCCGTaGGCCATGCTGGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLPSGTP*AMLEMG
Trigger: TCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGG...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAGTCCACCCTCCCGTTaGGGCTGGTGTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLSPPSR*GWCPPP
Trigger: GGGAGGTGGACACCAGCCTCAACGGGAGGGTGGACT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTGGGAGAGGATGCTGTTaGAGCGGAAGCGCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTGRGCC*SGSACR
Trigger: GCGGCAAGCGCTTCCGCTTCAACAGCATCCTCTCCC...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAGGGCCGACTCGGCCGTaGTGTGTGCCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLGPTRP*CVPSPR
Trigger: ACGTGGAGAAGGCACACATCACGGCCGAGTCGGCCC...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAACTCGTTGGCCGACTaGTCGCCACCGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLNSLAD*SPPPLG
Trigger: CCCCAACGGCGGTGGCGAGCAGTCGGCCAACGAGTT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATGGGCTGGCCGCTCATaGGCACGTGGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLWAGRS*ARGPSP
Trigger: AGGAGAAGGCCCACGTGCCCATGAGCGGCCAGCCCA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGGCAGGAGAGGTACCTaGAGTACAGGTTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSGRRGT*STGWRG
Trigger: CCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGAGGGAGGCGGCATCTaGCCGCACAGACAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTEGGGI*PHRQVQ
Trigger: CTGGACTTGTCTGTGCGGCCAGATGCCGCCTCCCTC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTCCAGGTTCTGCCCGTTaGGGAACTGCTGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSPGSAR*GTAASP
Trigger: TGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGG...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCCGCTCATCTGGGACATaGTGCCCAGGTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTRSSGT*CPGSAR
Trigger: ACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCG...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGGAGATGAAGGGCCATaGGCTCCATGGAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSGDEGP*APWRTL
Trigger: CAACGTCCTCCATGGAGCTCATGGCCCTTCATCTCC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTAGGATGCTGACTGCGTaGCGGCATAGTCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSRMLTA*RHSHSA
Trigger: CGCACTGTGACTATGCCGGCACGCAGTCAGCATCCT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTAGCCCCGGCGCTGGCTaGGGGCCGTCTAAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVSPGAG*GPSKVS
Trigger: AGAAACCTTAGACGGCCCGCAGCCAGCGCCGGGGCT...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCTCAATCCTCTGCAGTaGCGGTCAGCCCCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVLNPLQ*RSAPAL
Trigger: CAGCGCCGGGGCTGACCGGCACTGCAGAGGATTGAG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAACGTCGGGAACGCTGTaGTTAGCCTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLTSGTL*LACRAR
Trigger: CCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATGCAAGATGCGGATGTaGCGGTCCAGCTCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLCKMRM*RSSSSR
Trigger: GCGCGAGGAGCTGGACCGCCACATCCGCATCTTGCA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATTGCGGTCCCGCTTGTaGACACGGGAGTGCACGACC +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLLRSRL*TRECTT
Trigger: GGTCGTGCACTCCCGTGTCCACAAGCGGGACCGCAA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAATGCAGGGTCCACGTaGCCGGTCCATGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLNAGST*PVHAPL
Trigger: GAGCGGTGCATGGACCGGCCACGTGGACCCTGCATT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTACTTTGTCCGGGGTCATaGAGCCACTCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLLCPGS*SHSAGR
Trigger: CCTGCCTGCAGAGTGGCTTCATGACCCCGGACAAAG...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCATGCAGGGCCTCCTCTaGAGTCGATTCCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTMQGLL*SRFQGD
Trigger: GTCTCCCTGGAATCGACTTCAGAGGAGGCCCTGCAT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTGGTTGGCCTGGAGATaGAGGGCCATGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTWLAWR*RAMSSM
Trigger: CATGGAGCTCATGGCCCTTCATCTCCAGGCCAACCA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTGCTGCTGTCTTTGCTaGGGGCAGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTCCCLC*GQTVAW
Trigger: CCAAGCCACTGTCTGCCCTCAGCAAAGACAGCAGCA...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGTCATGAAGCCACTCTaGAGGCAGGAGAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSVMKPL*RQERYL
Trigger: CAGGTACCTCTCCTGCCTGCAGAGTGGCTTCATGAC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGCCAAAGTGTCTTCGTaGTTGCGCTGCAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTAKVSS*LRCSGC
Trigger: GCATCCGCTGCAGCGCAACCACGAAGACACTTTGGC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGGGTCGAGCTTACTTaGCAGGTCTCTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTRVELT*QVSLAA
Trigger: GGCAGCCAGAGAGACCTGCCAAGTAAGCTCGACCCT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGTCGGGGCACTCGGTaGGCTTCTCCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTSRGTR*ASPSCS
Trigger: GGAACATGAAGGAGAAGCCCACCGAGTGCCCCGACT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGAGGAGAGAACCCCTaGTGTCCACTGCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTRGENP*CPLLRC
Trigger: GCATCTCAGCAGTGGACATCAGGGGTTCTCTCCTCT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTCAGAACTGTAGGCCCTaGGGACCGACAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTQNCRP*GPTACS
Trigger: TGAACATGCTGTCGGTCCTCAGGGCCTACAGTTCTG...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTATGATGCCCAGGTTCTaGCCGTTGAGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTMMPRF*PLRNCC
Trigger: GCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCAT...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAGGGCTTGTGCAAGATaGGGATGTGGCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLRACAR*GCGGPA
Trigger: AGCTGGACCGCCACATCCGCATCTTGCACAAGCCCT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTACTCGGCCGTGATGTGTaGCTTCTCCACGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLLGRDV*LLHVAD
Trigger: ATCAGCCACGTGGAGAAGGCACACATCACGGCCGAG...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTGTCCACTGCTGAGATaGAGGGCCTCCTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTCPLLR*RASSEV
Trigger: GACTTCAGAGGAGGCCCTGCATCTCAGCAGTGGACA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTCCTCTGGGAGGACTTaGCACTGGGTTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTSSGRT*HWVSPH
Trigger: GTGAGGAGAAACCCAGTGGCAAGTCCTCCCAGAGGA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGCCGTGCCATGCAATaGTGTCCTGCACAGTTACCG +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTSRAMQ*CPAQLP
Trigger: CGGTAACTGTGCAGGACAGCATTGCATGGCACGGCT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCCTTGTGGTCTTGATTTaGGGGTTGCCCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTLVVLI*GLPRQR
Trigger: CCGCTGTCTGGGCAACCCCCAAATCAAGACCACAAG...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCCCCCGCTCCGGCTTTaGCAGGCCCGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYPPLRL*QARQGV
Trigger: GACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTAGGTGCACCTTAAGGTaGTGGGATGTCCGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSRCTLR*WDVRKV
Trigger: AACTTTCCGGACATCCCATCACCTTAAGGTGCACCT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGAGTCTCCTTGAGCTaGCCTTGGGCCATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTRVSLS*PWAIFS
Trigger: TGAGAAGATGGCCCAAGGTCAGCTCAAGGAGACTCT...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCCGAAGTCGCACAACGTaGACTTGTAGGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTRSRTT*TCRACA
Trigger: TGCACAAGCCCTACAAGTGCACGTTGTGCGACTTCG...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTGCCTTGGCAGCCGCCTaGAGCCGCTCGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVALAAA*SRSMQL
Trigger: CAGCTGCATCGAGCGGCTGCAGGCGGCTGCCAAGGC...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTCAAAACAAGCAGCCGTaGCATGCAATGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTQNKQP*HAMLSC
Trigger: GCAGGACAGCATTGCATGGCACGGCTGCTTGTTTTG...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTCCCCTGAGCCAACCATaGCTGGGTAAACACCAAACT +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTPLSQP*LGKHQT
Trigger: AGTTTGGTGTTTACCCAGGCATGGTTGGCTCAGGGG...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATACCCACGAGACCACTaGAGGACCCACCTCTACATG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLYPRDH*RTHLYM
Trigger: CATGTAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTGGGTTGGGCCGGGGATaGAGCTCGGGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVGLGRG*SSGKAW
Trigger: CCATGCCTTCCCCGAGCTCCATCCCCGGCCCAACCC...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTACCTCCCGGCCCAGCTaGTTGGCCAGGAGCGCCATC +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVTSRPS*LARSAI
Trigger: GATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGGT...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCCATCTCCGCAGCCTTaGCAGCCGCCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVPSPQP*QPPAAA
Trigger: AGCGGCTGCAGGCGGCTGCCAAGGCTGCGGAGATGG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAGGGAGGACTTGCCACTaGGTTTCTCCTCACCACCAT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLGRTCH*VSPHHH
Trigger: ATGGTGGTGAGGAGAAACCCAGTGGCAAGTCCTCCC...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAGGGCAGACAGTGGCTTaGTCATCATTTCCGGTTCGG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLGQTVA*SSFPVR
Trigger: CCGAACCGGAAATGATGACCAAGCCACTGTCTGCCC...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTCCATGGAGGACGTTGTaGAAGCACAAAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTPWRTL*KHKTSS
Trigger: GCTGCTTGTTTTGTGCTTTCACAACGTCCTCCATGG...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGGGCCTCCTGGGACATaGCGCCCATGGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSGPPGT*RPWAQA
Trigger: TGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAAGTGTCTTCGTGGTTaGGCTGCAGCGGATGCTCTT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLKCLRG*AAADAL
Trigger: AAGAGCATCCGCTGCAGCGCAACCACGAAGACACTT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATGGGAAGTTACAAAATaGAGGGTCCACGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLWEVTK*RVHVAG
Trigger: ACCGGCCACGTGGACCCTGCATTTTGTAACTTCCCA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCACCCGGCCCAGCTGGTTaGCCAGGAGCGCCATCTGAC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSPGPAG*PGAPSD
Trigger: GTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGG...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTACCGACTGGGACTCCTaGTCACTGCCCGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVTDWDS*SLPEPR
Trigger: GCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGT...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCGCTTGCAAGGACCCTTaGAAATTCACACCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTACKDP*KFTPLL
Trigger: GAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGC...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAAGTCCCTGGACGGGCTaGGAGGTGCCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSSPWTG*EVPVGC
Trigger: GCAGCCCACAGGCACCTCCCAGCCCGTCCAGGGACT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGCCCCTTGCCCAGGTTaGCCAGCTTGTGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSAPCPG*PACGSA
Trigger: TGCGGACCCACAAGCTGGGCAACCTGGGCAAGGGGC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTTGGGCAGCTCGCCCTTaGCATAGAGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVWAARP*HRAGWA
Trigger: AGCCCAGCCAGCTCTATGGCAAGGGCGAGCTGCCCA...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAATGTTCCCAGGACCCTaGAGGTTATACTCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLMFPGP*RLYSRV
Trigger: GACTCTCGAGTATAACCTGCAGGGTCCTGGGAACAT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCGAAGCAGCGCTGGTTaGTGGACGCCGGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVRSSAG*WTPADL
Trigger: GAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGAGGTGCCTGTGGGCTaGAGGCTGTCCCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIEVPVG*RLSPPS
Trigger: CGATGGCGGGGACAGCCTGCAGCCCACAGGCACCTC...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAACGGGGCCACTCAGGTaGGGCTCAGCTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPITGPLR*GSASGS
Trigger: GGAGCCGGAAGCTGAGCCCCACCTGAGTGGCCCCGT...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGGCGAGGGCACCGGGTaGGCCACGTCGGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFGEGTG*ATSGTL
Trigger: CAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATGCACGCTGGCAGGCTTaGGCGAGGGCACCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDARWQA*ARAPGG
Trigger: CCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGC...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTTGCCATAGAGCTGGCTaGGCTCGCTCAGGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVCHRAG*ARSGRL
Trigger: AAGCCGGCCTGAGCGAGCCCAGCCAGCTCTATGGCA...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTGGGCACTCCCGGTCTaGGAGAGGCCGCCTCCGACC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIWALPV*ERPPPT
Trigger: GGTCGGAGGCGGCCTCTCCCAGACCGGGAGTGCCCA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCCGAAGACATGCCCGTaGCCTGCCCCGAGTGATCTC +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVPKTCP*PAPSDL
Trigger: GAGATCACTCGGGGCAGGCCACGGGCATGTCTTCGG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCCCCGCTCCGGCTTTaGCAGGCCCGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPPLRL*QARQGV
Trigger: GACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCTGCGGTCGGGATACTaGCTGTTGTCAAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVLRSGY*LLSKGM
Trigger: CATGCCTTTTGACAACAGCCAGTATCCCGACCGCAG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTGCTTCTTCCATCCCTTaGGAACAGGGAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: QITTEDHEQTRASPDRPTASSIP*EQGKWK
Trigger: TTTCCATTTTCCCTGTTCTCAAGGGATGGAAGAAGC...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGCCAGGAGCGCCATCTaGCTGCCCATGGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFARSAI*LPMGWP
Trigger: CGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTTCCGCAGGTGAATCTTaGGGTTCCCCTTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVSAGES*GSPSAP
Trigger: CGGCGCAGAAGGGGAACCTCAAGATTCACCTGCGGA...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGGAGCGCCATCTGACTaGCCATGGGCTGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIGAPSD*PWAGRS
Trigger: TGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCC...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACGCTCCTCCAGCTCGTaGAGCAGGCGGTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIRSSSS*SRRFSS
Trigger: CGAGGAGAACCGCCTGCTGCACGAGCTGGAGGAGCG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGGACGCCGTGGGCCATaGTGGAGATGGGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSGRRGP*WRWETA
Trigger: TGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCACATCCTCCTCGCCCTTaGGGTCCCGCTTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSHPPRP*GPACGH
Trigger: GTGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATG...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTCTGGGGTTTAATCTGTaGTCCCAGCCTGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVLGFNL*SQPARK
Trigger: TTTCCTTGCAGGCTGGGAGCACAGATTAAACCCCAG...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGCGCTTGCCGCAGAGTaGGCACGGGTACTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSALAAE*ARVLAV
Trigger: AACCGCAAGTACCCGTGCCCACTCTGCGGCAAGCGC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATAGGAGCCCGGCGTGGTaGAGCGGCTCACCGACTGGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDRSPAW*SGSPTG
Trigger: CCCAGTCGGTGAGCCGCTCCACCACGCCGGGCTCCT...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAGAAGTGGGTGCTTTTaGAAGGAAGGTCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLRSGCF*KEGQCL
Trigger: AAGGCACTGACCTTCCTTCCAAAAGCACCCACTTCT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGCTGGGAGGTGCCTGTaGGCTGCAGGCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFAGRCL*AAGCPR
Trigger: GCGGGGACAGCCTGCAGCCCACAGGCACCTCCCAGC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCTCCCAGAGTCTCCTTaGGCTGACCTTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVLPESP*ADLGPS
Trigger: AGATGGCCCAAGGTCAGCTCAAGGAGACTCTGGGAG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATGCCGCCCTCTTCCGTaGGGTCTGCAGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRCRPLP*GLQSSP
Trigger: CGGGGAGCTCTGCAGACCTCACGGAAGAGGGCGGCA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCCGTTGAGGAACTGCTaGAAGTCCACCCTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVPLRNC*KSTLPL
Trigger: CAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAAGGCTGCCTTTCAGCTaGTTGTCCCGCAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSRLPFS*LSRRMA
Trigger: CGCCATCCTGCGGGACAAGCAGCTGAAAGGCAGCCT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACACGTGGCCGGTCCATaGACCGCTCTTCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIHVAGP*TALLLS
Trigger: GGAGAGCAGAAGAGCGGTGCATGGACCGGCCACGTG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAGACTGGCACCGCAGCTaGCTCCCGACACATCTCATT +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQDWHRS*LPTHLI
Trigger: AATGAGATGTGTCGGGAGGCAGCTGCGGTGCCAGTC...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAAGCTCGGGGAAGGCATaGCTGAGCTGGGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSSSGKA*LSWEVI
Trigger: GATCACCTCCCAGCTCAGCCATGCCTTCCCCGAGCT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCGCAGCGGAACTCGTTaGCCGACTGCTCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDRSGTR*PTARHR
Trigger: GCGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTGCG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGAGCGGCTCACCGACTaGGACTCCTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIERLTD*DSWSLP
Trigger: GGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGTCGCGAAGCAGCGCTaGTTGCTGGACGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIVAKQR*LLDAGR
Trigger: TCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGAC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTGTGACCACACAAGTCTaGCCTCTTGATACATCCAGA +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVVTTQV*PLDTSR
Trigger: TCTGGATGTATCAAGAGGCCAGACTTGTGTGGTCAC...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGACCGCTCCAGTCTGACTaGCACCGCAGCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRPLQSD*HRSCLP
Trigger: CGGGAGGCAGCTGCGGTGCCAGTCAGACTGGAGCGG...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR CAA 72 bp AAGAAAGCAGCTTGCTCTATGCCAGATGGGTCCAAGTaGCACAGCGACCTCATTTACACTGAAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KKAACSMPDGSK*HSDLIYTETSV
Trigger: AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCATAGAGCAAGCTGCTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTGGAGTCCATGTCCTCTaGGGAGGCAATGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVGVHVL*GGNVRE
Trigger: CTCTCTGACATTGCCTCCTCAGAGGACATGGACTCC...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAGTGACCGCTCCAGTCTaGCTGGCACCGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRVTAPV*LAPQLP
Trigger: AGGCAGCTGCGGTGCCAGTCAGACTGGAGCGGTCAC...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGTGGGCACGGGTACTTaGGGTTCTTGCGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIVGTGT*GSCGRR
Trigger: ACGACGCCCGCAAGAACCGCAAGTACCCGTGCCCAC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCACGCCCACGCCCCTTaGCCAGGTTGCCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFHAHAP*PGCPAC
Trigger: ACAAGCTGGGCAACCTGGGCAAGGGGCGTGGGCGTG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGGGGCTGCAGCAGGCTaGCTTTCAGCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIGAAAG*LSAACP
Trigger: GGGACAAGCAGCTGAAAGGCAGCCTGCTGCAGCCCC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAATGAGCTCCTCCTCCTaGGAAGCCGCGAAGTCGCAC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIMSSSS*EAAKSH
Trigger: GTGCGACTTCGCGGCTTCGCAGGAGGAGGAGCTCAT...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCCACCTGGTGGTAAGTaGGGAACACCCGGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIPPGGK*GTPGRS
Trigger: ACTGCGGCCGGGTGTTCCGCACTTACCACCAGGTGG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCATGCACCGCTCTTCTaGTCTCCCAGAGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVHAPLF*SPRVSL
Trigger: CAAGGAGACTCTGGGAGAGCAGAAGAGCGGTGCATG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCCGCTCATGGGCACGTaGGCCTTCTCCTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIPLMGT*AFSSRD
Trigger: ATCCCTGGAGGAGAAGGCCCACGTGCCCATGAGCGG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCCATCTGACTGCCCATaGGCTGGCCGCTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIPSDCP*AGRSWA
Trigger: TGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCCGCCAAGGGGTCCTaGGCTTGGAGAAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPAKGS*AWRRPW
Trigger: CCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGCGGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTTGCAATATACAGGTTaGTCTGCTCAGTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVLQYTG*SAQLVS
Trigger: GGAGACCAACTGAGCAGACCAACCTGTATATTGCAA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTGACGCTGCATCACTGTaGCTGTCACTTGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVDAASL*LSLVCI
Trigger: AATACAAACAAGTGACAGCCACAGTGATGCAGCGTC...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAATCTGGTGCAGCTTCTaGCTCATGGCATACTGGCCG +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSIWCSF*LMAYWP
Trigger: CGGCCAGTATGCCATGAGTCAGAAGCTGCACCAGAT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCTCCTCGCCAATGTCTaGGGAGGATGGCGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDLLANV*GGWRGG
Trigger: CCCTCCTCGCCATCCTCCTCAGACATTGGCGAGGAG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGCCTTTCAGAGCATCTaGGGGGACCTCCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSAFQSI*GDLRRH
Trigger: ATGTCTTCGGAGGTCCCCTCAGATGCTCTGAAAGGC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGGAACTGGAGGCCCCTaGGCCAACCATGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFGTGGP*ANHAWV
Trigger: TACCCAGGCATGGTTGGCTCAGGGGCCTCCAGTTCC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCAGAACTGTAGGCCCTaGGGACCGACAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYQNCRP*GPTACS
Trigger: TGAACATGCTGTCGGTCCTCAGGGCCTACAGTTCTG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAAGCCTTTGCAATCCATaGCTAATACTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLSLCNP*LILEHM
Trigger: CATATGTTCCAGTATTAGTCATGGATTGCAAAGGCT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGACGACCCTGGAGCGCTTaGACCTGCGGTCGGGATACT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRRPWSA*TCGRDT
Trigger: AGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCG...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTCAGAACCCCGGCGTTTaGCAAAGTGTCTTCGTGGTT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVQNPGV*QSVFVV
Trigger: AACCACGAAGACACTTTGGCAAACGCCGGGGTTCTG...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAGGAAATTCACACCGTTaGTCACAATGCTTTGATAAG +
Preference number: 4 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLGNSHR*SQCFDK
Trigger: CTTATCAAAGCATTGTGAGCAACGGTGTGAATTTCC...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCACTTTGCGTTTCGCTTTaGCCAGGTGGTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSLCVSL*PGGWPG
Trigger: TCCAGGCCAACCACCTGGGCAAAGCGAAACGCAAAG...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTATACTGTAGATTGGTaGACCGTGTGTATACACATA +
Preference number: 4 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTYTVDW*TVCIHI
Trigger: TATGTGTATACACACGGTGCACCAATCTACAGTATA...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCACTCTTCCGTGAGGTCTaGAGAGCTCCCCGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSLFREV*RAPRLD
Trigger: GTCAAGGCGGGGAGCTCTGCAGACCTCACGGAAGAG...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTCTGCGCCGCCCTGTaGTCGCAGTACGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFFCAAL*SQYGHL
Trigger: CAAGTGCCCGTACTGCGACCACAGGGCGGCGCAGAA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATGCACCTCGGGGTCGCTaGGGGACTTGTTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDAPRGR*GTCSSP
Trigger: CGGTGAAGAACAAGTCCCCCAGCGACCCCGAGGTGC...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCGCCGTGGGCCATGCTaGAGATGGGAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFRRGPC*RWETAA
Trigger: AGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGCCGCTCGATGCAGCTaGATTTCAGCGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFAARCS*ISAAAR
Trigger: TCGTGCCGCCGCTGAAATCCAGCTGCATCGAGCGGC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTAGCAGCGCTGGTTGCTaGACGCCGGCAGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFSSAGC*TPADLP
Trigger: TGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCT...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTACGGGCAGTCCTTCATaGCCGAGCCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIITGSPS*PSPGFC
Trigger: ACAGAAGCCTGGGCTCGGCCATGAAGGACTGCCCGT...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCACCCCCTCAGGATGTCTaGCCTGATGAACAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSPPQDV*PDEQRS
Trigger: GCTTCTCTGTTCATCAGGCCAGACATCCTGAGGGGG...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCATCAGGCTCCTTGTTaGGGCAGGAACTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIHQAPC*GRNWRP
Trigger: GGGCCTCCAGTTCCTGCCCCAACAAGGAGCCTGATG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGCTTGGAGAAGACCCTaGCTGTGCCACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIAWRRP*LCHCFS
Trigger: GGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGC...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCATCATCCTTGTGGTCTTaGTTTGGGGGTTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSSSLWS*FGGCPD
Trigger: GTCTGGGCAACCCCCAAATCAAGACCACAAGGATGA...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCCTGATGTCCACTGCTaGGATGCAGGGCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFPDVHC*DAGPPL
Trigger: CAGAGGAGGCCCTGCATCTCAGCAGTGGACATCAGG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTGCCCGTTGAGGAACTaGTGCAAGTCCACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFCPLRN*CKSTLP
Trigger: CGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACATGCAATGCTGTCCTaGACAGTTACCGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIHAMLS*TVTEEP
Trigger: GGGCTCCTCGGTAACTGTGCAGGACAGCATTGCATG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCCTGGCTGTGCCACTaGTTCTCCGGTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPWLCH*FSGAWD
Trigger: ATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTAGAAGACCCTGGCTGTaGCACTGCTTCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIRRPWL*HCFSGA
Trigger: AGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCT...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTAAGGCATGGCTGAGCTaGGAGGTGATCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIKAWLS*EVIWCS
Trigger: GCTGCACCAGATCACCTCCCAGCTCAGCCATGCCTT...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCATCGATGTCGCTCATCTaGGACATGATGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSSMSLI*DMMPRF
Trigger: GAACCTGGGCATCATGTCCCAGATGAGCGACATCGA...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTGTGCCTTCTCCACGTaGCTGATGAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIICAFST*LMSSSS
Trigger: GGAGGAGGAGCTCATCAGCCACGTGGAGAAGGCACA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACTTCCTTCTCCTTCATaGGCAGCTCGCCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILPSPS*AARPCH
Trigger: ATGGCAAGGGCGAGCTGCCCATGAAGGAGAAGGAAG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACTTGGCAGGTCTCTCTaGCTGCCCACTTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILGRSL*LPTLVL
Trigger: CAGCACTAAAGTGGGCAGCCAGAGAGACCTGCCAAG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCTTTGCCCAGGTGGTTaGCCTGGAGATGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIILCPGG*PGDEGP
Trigger: TGGCCCTTCATCTCCAGGCCAACCACCTGGGCAAAG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCTCGCCTCCCGGGCTTaGTCTTTGCAGTTGACTGTG +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIILASRA*SLQLTV
Trigger: CACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTTGCTTCTCCGGTGCTTaGGATAAAGGTGAGACCAGT +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVCFSGA*DKGETS
Trigger: ACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCA...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAACAGAAAGCAAGGGACTaGCACAGTCACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQQKARD*HSHQTQ
Trigger: CTGTGTTTGGTGACTGTGCCAGTCCCTTGCTTTCTG...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR CAA 72 bp GAAGAGGGGATGTTCCCAGTGTCACAAACAGAATTATaGCCTGTCGCATCTGAGGATGCTGAAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: EEGMFPVSQTEL*PVASEDAEKTQ
Trigger: TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACACTGGGAACATCCCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGCTCCTCGCGCTTCTTaGACTTGCCCTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFAPRAS*TCPCRR
Trigger: CCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATTTGTGCTTGCGCATGTaGCCCTTGAGGAACCACGCC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDLCLRM*PLRNHA
Trigger: GGCGTGGTTCCTCAAGGGTCACATGCGCAAGCACAA...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAATTCCCAGAAGCCTCTaGGTCGACCCTGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRIPRSL*VDPGAL
Trigger: AAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAAT...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGGTACTTGCGGTTCTTaGGGGCGTCGTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFGTCGS*GRRPRC
Trigger: ACATCGAGGACGACGCCCGCAAGAACCGCAAGTACC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATATCTTCGTGGTTGCGCTaGAGCGGATGCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPISSWLR*SGCSLD
Trigger: GTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGA...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAATGTTGTCAAAAGGCATaGGATGGACGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQCCQKA*DGRRGH
Trigger: ATGTCCTCTGCGTCCATCGCATGCCTTTTGACAACA...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTGGAGAAGAAAATCTTaGTTCATGTCTGTGACACTT +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVWRRKS*FMSVTL
Trigger: AAGTGTCACAGACATGAAGCAAGATTTTCTTCTCCA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATGGACGCAGAGGACATaGGTCTTCAGGTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSWTQRT*VFRFPF
Trigger: GAAGGGGAACCTGAAGACCCATGTCCTCTGCGTCCA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTTCATAAGAGCTTGCTaGAGAAGAAAATCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVFIRAC*RRKSCF
Trigger: GAAGCAAGATTTTCTTCTCCAGCAAGCTCTTATGAA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCAGGTTGTCCACAGGTaGAGGGATCTGTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFQVVHR*RDLSSS
Trigger: GCTGGATGACAGATCCCTTCACCTGTGGACAACCTG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCAGATGGGTCCAAGTTaGACAGCGACCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYQMGPS*TATSFT
Trigger: TGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTATCCAAGCAAGGTTTTaGTCACTTGAGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVIQARF*SLESRS
Trigger: GGATCTGGACTCAAGTGACCAAAACCTTGCTTGGAT...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCGTTGTTCTCCCCCTTaGAGGAGTCCATGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDRCSPP*RSPCPL
Trigger: CAGAGGACATGGACTCCTCCAAGGGGGAGAACAACG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATGCTGAGGGCAGACAGTaGCTTGGTCATCATTTCCGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDAEGRQ*LGHHFR
Trigger: CCGGAAATGATGACCAAGCCACTGTCTGCCCTCAGC...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATCAAAAGGCATGCGATaGACGCAGAGGACATGGGTC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSSKGMR*TQRTWV
Trigger: GACCCATGTCCTCTGCGTCCATCGCATGCCTTTTGA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAGAAGGACAGCAGCACTaGACAAAATGGAATCAACAC +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQEGQQH*TKWNQH
Trigger: GTGTTGATTCCATTTTGTCCAGTGCTGCTGTCCTTC...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTCCAGGGGTTCATACTaGGATTTCTCGGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIISRGSY*DFSDFL
Trigger: GAGGAAGTCCGAGAAATCTCAGTATGAACCCCTGGA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTCAGCAGGCATTTTCTaGTTGGAGCCATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFSAGIF*LEPSAP
Trigger: GGGAGCAGATGGCTCCAAGCAGAAAATGCCTGCTGA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCACACCGTTGCTCACAATaGTTTGATAAGCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSHRCSQ*FDKLFR
Trigger: TCGGAAGAGCTTATCAAAGCATTGTGAGCAACGGTG...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAAAGCAGCTTGCTCTATaGCAGATGGGTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSKQLAL*QMGPSC
Trigger: GCAACTTGGACCCATCTGGCATAGAGCAAGCTGCTT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTCTGCCGCTCCCGATaGTGTCGCTCTAAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFFCRSR*CRSKWY
Trigger: ATACCACTTAGAGCGACACCATCGGGAGCGGCAGAA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTTTCGGGGATCAGGATaGGGACATCCTCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIFRGSG*GHPLQS
Trigger: ACTCTGAAGAGGATGTCCCCATCCTGATCCCCGAAA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACGCGAATTACAGCAGCTaGTGTCAGATTATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYANYSS*CQIIEV
Trigger: CACCTCTATAATCTGACACCAGCTGCTGTAATTCGC...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACAAGTTTTTAAGGCCCTaGGGTTTAATCTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYKFLRP*GLICAP
Trigger: GGGAGCACAGATTAAACCCCAGGGCCTTAAAAACTT...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR CAA 72 bp TTAGATGGTATCGTTTTTCAGTTAAGAGCATTATTTTaGGACAAAGACGACTTTCGAGTTGGAAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LDGIVFQLRALF*DKDDFRVGRAP
Trigger: GGGGGCCCTTCCAACTCGAAAGTCGTCTTTGTCCAAAAATAATGCTCTTAACTGAAAAACGATACCATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCAGAGAAGCTTTGCTTaGCATCTCATCCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIQRSFA*HLILVV
Trigger: GACCACAAGGATGAGATGTCAAGCAAAGCTTCTCTG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCAGAGTCTAGAGAGCTaGTCATATTGGAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFQSLES*SYWRGP
Trigger: TGGGCCTCTCCAATATGATCAGCTCTCTAGACTCTG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCAGATCTGGCAGCAGTaGTCAAAGGAGTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDQIWQQ*SKESLC
Trigger: GCACAAAGACTCCTTTGAGCACTGCTGCCAGATCTG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTGCGCTGCAGCGGATaGTCTTTAGACAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFLRCSG*SLDKKP
Trigger: TGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTGGAAGGAAGGTCAGTaGCTTTCAGAGCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFWKEGQ*LSEHLR
Trigger: CCTCAGATGCTCTGAAAGGCACTGACCTTCCTTCCA...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACTGTCCATGAAAGCTTaGAAGGACCCTTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILSMKA*KDPWKF
Trigger: GAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAATTTGCTGTGCTACTTaGAAGTCCGTTAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIICCAT*KSVKGC
Trigger: GCAGCCTTTAACGGACTTGCAAGTAGCACAGCAAAT...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATATTATACTCGAGAGTCTaGTTCAGCCCGTGTGACAAA +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILYSRV*FSPCDK
Trigger: TTTGTCACACGGGCTGAACCAGACTCTCGAGTATAA...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCGATCTCAGAGAAGTaGGTGCTTTTGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPISEK*VLLEGR
Trigger: CCTTCCTTCCAAAAGCACCCACTTCTCTGAGATCGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATTGCTCTATGCCAGATaGGTCCAAGTTGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRLLYAR*VQVAQR
Trigger: TCGCTGTGCAACTTGGACCCATCTGGCATAGAGCAA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAAAGTTACAAATGTTCTaGAAAGAAGGCCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQKLQMF*KEGLCQ
Trigger: CTGACACAGGCCTTCTTTCCAGAACATTTGTAACTT...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCCCACTTTAGTGCTGTaGACCAAATCAGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFPTLVL*TKSAGI
Trigger: AATGCCTGCTGATTTGGTTCACAGCACTAAAGTGGG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACTGCTTGTAGAAGTCTaGTGGGAAGTTACAAAATGC +
Preference number: 4 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILLVEV*WEVTKC
Trigger: GCATTTTGTAACTTCCCATCAGACTTCTACAAGCAG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAAACACTTCCTGATCATTaGTTTCATTTGGCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: VSQTELLPVASEDAEKTQTLPDH*FHLAVY
Trigger: ATACACAGCCAAATGAAATCAATGATCAGGAAGTGT...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAATGACATTCAGAAACTaGCGCTGCATCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRMTFRN*RCITVA
Trigger: AGCCACAGTGATGCAGCGTCAGTTTCTGAATGTCAT...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAATTTGCTGTGCTACTTaGAAGTCCGTTAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSICCAT*KSVKGC
Trigger: GCAGCCTTTAACGGACTTGCAAGTAGCACAGCAAAT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAATATACAGGTTGGTCTaGTCAGTTGGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRIYRLV*SVGLLL
Trigger: CAGGAGGAGACCAACTGAGCAGACCAACCTGTATAT...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCCTATGATGACAACGTaGAAACTCTCTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIPMMTT*KLSSPD
Trigger: GTCTGGAGAAGAGAGTTTCCACGTTGTCATCATAGG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCTTACCACACAAGTCTaGCCTCTTGATACATCCAGA +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIILTTQV*PLDTSR
Trigger: TCTGGATGTATCAAGAGGCCAGACTTGTGTGGTAAG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATACTGTCATCTGCTCCTaGTTAATAGGACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDTVICS*LIGRPD
Trigger: GTCAGGTCGTCCTATTAACCAGGAGCAGATGACAGT...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGACCACCTGCATTGTTTTaGAAGTACTTGTTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRPPALF*KYLLPG
Trigger: ACCCGGCAACAAGTACTTCCAAAACAATGCAGGTGG...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAGATTCCTTATTAGCCTaGGATTCTTTCTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSDSLLA*DSFWSQ
Trigger: CTGAGACCAGAAAGAATCTCAGGCTAATAAGGAATC...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAGATACATCCAGAATTTaGTGTGCTACTTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSDTSRI*CATCKS
Trigger: GGACTTGCAAGTAGCACAGCAAATTCTGGATGTATC...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCACACAAACAGAATTATTaGCTGTCGCATCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSHKQNY*LSHLRM
Trigger: CATCCTCAGATGCGACAGGCAATAATTCTGTTTGTG...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
3UTR CAA 72 bp ATTCAGAAACTGACGCTGCATCACTGTGGCTGTCACTaGTTTGTATTACAAGTTACAAATGTTCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IQKLTLHHCGCH*FVLQVTNVLER
Trigger: TCTTTCCAGAACATTTGTAACTTGTAATACAAACAAGTGACAGCCACAGTGATGCAGCGTCAGTTTCTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR TCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATCTGCAGACACTTCCTaGTCATTGATTTCATTTGGC +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRSADTS*SLISFG
Trigger: GCCAAATGAAATCAATGATCAGGAAGTGTCTGCAGA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR GCA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTGATACATCCAGAATTTaGTGTGCTACTTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFDTSRI*CATCKS
Trigger: GGACTTGCAAGTAGCACAGCAAATTCTGGATGTATC...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATTGGTGTCGCTCTAAGTaGTATTTTAAGGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDWCRSK*YFKDAD
Trigger: GTCAGCATCCTTAAAATACCACTTAGAGCGACACCA...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGTTAATAGGACGACCTaGCACAATATTAAACTAGCA +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIVNRTT*HNIKLA
Trigger: TGCTAGTTTAATATTGTGTCAGGTCGTCCTATTAAC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR TCA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCAAGGTGCTATTCACTaGAATTTTACTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDQGAIH*NFTVIC
Trigger: GCAGATGACAGTAAAATTTCAGTGAATAGCACCTTG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR GCA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGACAATGGACATTTGTCTaGAGACACTTCCTGATCATT +
Preference number: 4 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRQWTFV*RHFLII
Trigger: AATGATCAGGAAGTGTCTGCAGACAAATGTCCATTG...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CCA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTATATATACTGTAGATTaGTGCACCGTGTGTATACAC +
Preference number: 4 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIIYTVD*CTVCIH
Trigger: GTGTATACACACGGTGCACCAATCTACAGTATATAT...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR CAA 72 bp CAAAGCACACGATCACCCCGTACAAGTTTACATATTTaGCTTCAATCACCATTTTTAAGTTGTAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: QSTRSPRTSLHI*LQSPFLSCRCQ
Trigger: TTGACATCTACAACTTAAAAATGGTGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
3UTR CAA 72 bp AAGCTATTTCATAAGAGCTTGCTGGAGAAGAAAATCTaGCTTCATGTCTGTGACACTTATAAAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: KLFHKSLLEKKI*LHVCDTYKNQH
Trigger: GTGTTGGTTTTTATAAGTGTCACAGACATGAAGCAAGATTTTCTTCTCCAGCAAGCTCTTATGAAATAGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 90 bp GGCGAGGGCACCGGGTGGGCCACGTCGGGAACGCTGTGGTTAGCCTaGAGGGCCAGGGTGCAGGCGGCCAGCGGGGCCTGCTGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: GEGTGWATSGTLWLA*RARVQAASGACWAC
Trigger: GCACGCCCAGCAGGCCCCGCTGGCCGCCTGCACCCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp TACAGCGGAAGCCCGCCGCCGGGGCCACCGCGTCCTCCTGCACGCTaGCAGGCTTGGGCGAGGGCACCGGGTGGGCCACGTCGGGAACGC +
Preference number: 5 (lower is better)
Translates to: YSGSPPPGPPRPPAR*QAWARAPGGPRRER
Trigger: GCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTGTA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp CAGAAGGTACAGCGGAAGCCCGCCGCCGGGGCCACCGCGTCCTCCTaGACGCTGGCAGGCTTGGGCGAGGGCACCGGGTGGGCCACGTCG +
Preference number: 5 (lower is better)
Translates to: QKVQRKPAAGATASS*TLAGLGEGTGWATS
Trigger: CGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTGTACCTTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp GCAGGCTTGGGCGAGGGCACCGGGTGGGCCACGTCGGGAACGCTGTaGTTAGCCTGCAGGGCCAGGGTGCAGGCGGCCAGCGGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AGLGEGTGWATSGTL*LACRARVQAASGAC
Trigger: GCAGGCCCCGCTGGCCGCCTGCACCCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GGGCGTGCGGCGGGGGCTTCAGGTCCGGCCGGGGCTGCAGCAGGCTaGCTTTCAGCTGCTTGTCCCGCAGGATGGCGCGCTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GRAAGASGPAGAAAG*LSAACPAGWRAPPA
Trigger: AGCTGGAGGAGCGCGCCATCCTGCGGGACAAGCAGCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCTGAAGCCCCCGCCGCACGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp ACCGCGTCCTCCTGCACGCTGGCAGGCTTGGGCGAGGGCACCGGGTaGGCCACGTCGGGAACGCTGTGGTTAGCCTGCAGGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: TASSCTLAGLGEGTG*ATSGTLWLACRARV
Trigger: CACCCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GGGGGCTTCAGGTCCGGCCGGGGCTGCAGCAGGCTGCCTTTCAGCTaGTTGTCCCGCAGGATGGCGCGCTCCTCCAGCTCGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGFRSGRGCSRLPFS*LSRRMARSSSSCSR
Trigger: CCTGCTGCACGAGCTGGAGGAGCGCGCCATCCTGCGGGACAAGCAGCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCTGAAGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp AGCCCGGCGTGGTGGAGCGGCTCACCGACTGGGACTCCTGGTCACTaGCCGAGCCACGCCGCTCATCCAGGCCCACGTGCAGCCCATCCT +
Preference number: 5 (lower is better)
Translates to: SPAWWSGSPTGTPGH*PSHAAHPGPRAAHP
Trigger: AGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp CAGCGGAACTCGTTGGCCGACTGCTCGCCACCGCCGTTGGGGCCCTaGCCCTGGGCCGACTCGGCCGTGATGTGTGCCTTCTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: QRNSLADCSPPPLGP*PWADSAVMCAFSTW
Trigger: CCACGTGGAGAAGGCACACATCACGGCCGAGTCGGCCCAGGGCCAGGGCCCCAACGGCGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 90 bp CTGGTGTCCACCTCCCGGCCCAGCTGGTTGGCCAGGAGCGCCATCTaGCTGCCCATGGGCTGGCCGCTCATGGGCACGTGGGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LVSTSRPSWLARSAI*LPMGWPLMGTWAFS
Trigger: GGAGAAGGCCCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGGTGGACACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp CCTTTCAGCTGCTTGTCCCGCAGGATGGCGCGCTCCTCCAGCTCGTaGAGCAGGCGGTTCTCCTCGCGCACACGCCCACGCCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PFSCLSRRMARSSSS*SRRFSSRTRPRPLP
Trigger: GGGCAAGGGGCGTGGGCGTGTGCGCGAGGAGAACCGCCTGCTGCACGAGCTGGAGGAGCGCGCCATCCTGCGGGACAAGCAGCTGAAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp ACCGCCGTTGGGGCCCTGGCCCTGGGCCGACTCGGCCGTGATGTGTaGCTTCTCCACGTGGCTGATGAGCTCCTCCTCCTGCGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: TAVGALALGRLGRDV*LLHVADELLLLRSR
Trigger: GCGGCTTCGCAGGAGGAGGAGCTCATCAGCCACGTGGAGAAGGCACACATCACGGCCGAGTCGGCCCAGGGCCAGGGCCCCAACGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GACTCCTGGTCACTGCCCGAGCCACGCCGCTCATCCAGGCCCACGTaGAGCCCATCCTCCTCGCCCTTGCGGTCCCGCTTGTGGACACGG +
Preference number: 5 (lower is better)
Translates to: DSWSLPEPRRSSRPT*SPSSSPLRSRLWTR
Trigger: CCGTGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp CCTCCCGGCCCAGCTGGTTGGCCAGGAGCGCCATCTGACTGCCCATaGGCTGGCCGCTCATGGGCACGTGGGCCTTCTCCTCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: PPGPAGWPGAPSDCP*AGRSWARGPSPPGM
Trigger: CATCCCTGGAGGAGAAGGCCCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CCA 90 bp TTAGAGGAGCCCGGCGTGGTGGAGCGGCTCACCGACTGGGACTCCTaGTCACTGCCCGAGCCACGCCGCTCATCCAGGCCCACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LEEPGVVERLTDWDS*SLPEPRRSSRPTCS
Trigger: GCTGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGGCTCCTCTAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp TCGGTGACGTTAGAGGAGCCCGGCGTGGTGGAGCGGCTCACCGACTaGGACTCCTGGTCACTGCCCGAGCCACGCCGCTCATCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SVTLEEPGVVERLTD*DSWSLPEPRRSSRP
Trigger: GGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGGCTCCTCTAACGTCACCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp TGTCCACCTCCCGGCCCAGCTGGTTGGCCAGGAGCGCCATCTGACTaGCCATGGGCTGGCCGCTCATGGGCACGTGGGCCTTCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CPPPGPAGWPGAPSD*PWAGRSWARGPSPP
Trigger: TGGAGGAGAAGGCCCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGGTGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp CACGCCGCTCATCCAGGCCCACGTGCAGCCCATCCTCCTCGCCCTTaGGGTCCCGCTTGTGGACACGGGAGTGCACGACCACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: HAAHPGPRAAHPPRP*GPACGHGSARPPGG
Trigger: ACCACCAGGTGGTCGTGCACTCCCGTGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp TGCAGGCAGGAGAGGTACCTGGAGTACAGGTTGGCGTGGGCCTCCTaGGACATGCCGCCCATGGGCACAGGCACCTCGGGGTCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CRQERYLEYRLAWAS*DMPPMGTGTSGSLG
Trigger: CCCCAGCGACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp GCTACTGTACGAGTTCTCGGAGCAGCCCCGGGCCGGGCAGATTTATaGGGGCGCGTCACGGCTACGCCAGGTCCCGCCGCCGGAGCATCT +
Preference number: 5 (lower is better)
Translates to: ATVRVLGAAPGRADL*GRVTATPGPAAGAS
Trigger: AGATGCTCCGGCGGCGGGACCTGGCGTAGCCGTGACGCGCCCCCATAAATCTGCCCGGCCCGGGGCTGCTCCGAGAACTCGTACAGTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS TCA 90 bp CCTGCAGCCGCTCGATGCAGCTGGATTTCAGCGGCGGCACGAGATTaGGGCATCCCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCGT +
Preference number: 5 (lower is better)
Translates to: PAAARCSWISAAARD*GIPGGSACPPPGRR
Trigger: ACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCCAGCTGCATCGAGCGGCTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp AGGAGAGGTACCTGGAGTACAGGTTGGCGTGGGCCTCCTGGGACATaGCGCCCATGGGCACAGGCACCTCGGGGTCGCTGGGGGACTTGT +
Preference number: 5 (lower is better)
Translates to: RRGTWSTGWRGPPGT*RPWAQAPRGRWGTC
Trigger: ACAAGTCCCCCAGCGACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GCAGCTTCCCCAGCGCTTCCTTCTCCTTCATGGGCAGCTCGCCCTTaGCATAGAGCTGGCTGGGCTCGCTCAGGCCGGCTTTGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: AASPALPSPSWAARP*HRAGWARSGRLCPG
Trigger: CCCCGGACAAAGCCGGCCTGAGCGAGCCCAGCCAGCTCTATGGCAAGGGCGAGCTGCCCATGAAGGAGAAGGAAGCGCTGGGGAAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp CCCTGGCCCTGGGCCGACTCGGCCGTGATGTGTGCCTTCTCCACGTaGCTGATGAGCTCCTCCTCCTGCGAAGCCGCGAAGTCGCACAAC +
Preference number: 5 (lower is better)
Translates to: PWPWADSAVMCAFST*LMSSSSCEAAKSHN
Trigger: GTTGTGCGACTTCGCGGCTTCGCAGGAGGAGGAGCTCATCAGCCACGTGGAGAAGGCACACATCACGGCCGAGTCGGCCCAGGGCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp ACCTGGAGTACAGGTTGGCGTGGGCCTCCTGGGACATGCCGCCCATaGGCACAGGCACCTCGGGGTCGCTGGGGGACTTGTTCTTCACCG +
Preference number: 5 (lower is better)
Translates to: TWSTGWRGPPGTCRP*AQAPRGRWGTCSSP
Trigger: CGGTGAAGAACAAGTCCCCCAGCGACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp AAGCCACTCTGCAGGCAGGAGAGGTACCTGGAGTACAGGTTGGCGTaGGCCTCCTGGGACATGCCGCCCATGGGCACAGGCACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KPLCRQERYLEYRLA*ASWDMPPMGTGTSG
Trigger: CCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCAGAGTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp TTGAGGCATCCCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCGTaGGCCATGCTGGAGATGGGAGACAGCAGCTTCCCCAGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: LRHPRRECLSPSGTP*AMLEMGDSSFPSAS
Trigger: GGAAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp CTGGGCTCGCTCAGGCCGGCTTTGTCCGGGGTCATGAAGCCACTCTaGAGGCAGGAGAGGTACCTGGAGTACAGGTTGGCGTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGSLRPALSGVMKPL*RQERYLEYRLAWAS
Trigger: GGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCAGAGTGGCTTCATGACCCCGGACAAAGCCGGCCTGAGCGAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp ATCCCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCGTGGGCCATaGTGGAGATGGGAGACAGCAGCTTCCCCAGCGCTTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: IPGGSACPPPGRRGP*WRWETAASPALPSP
Trigger: AGGAGAAGGAAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp CTGGATTTCAGCGGCGGCACGAGATTGAGGCATCCCAGGAGGGAGTaGTTGTCCCCCTCCGGGACGCCGTGGGCCATGCTGGAGATGGGA +
Preference number: 5 (lower is better)
Translates to: LDFSGGTRLRHPRRE*LSPSGTPWAMLEMG
Trigger: TCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp CCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCGTGGGCCATGCTaGAGATGGGAGACAGCAGCTTCCCCAGCGCTTCCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PGGSACPPPGRRGPC*RWETAASPALPSPS
Trigger: TGAAGGAGAAGGAAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp GCAGTCCTTCATGGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTaGTTGCTGGACGCCGGCAGATCTCCCAGCCTCCTCGCCAATGTC +
Preference number: 5 (lower is better)
Translates to: AVLHGRAQASVAKQR*LLDAGRSPSLLANV
Trigger: GACATTGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATGAAGGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp TGCCACTGCTTCTCCGGTGCTTGGGATAAAGGTGAGACCAGTCCCTaGACGGGCTGGGAGGTGCCTGTGGGCTGCAGGCTGTCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: CHCFSGAWDKGETSP*TGWEVPVGCRLSPP
Trigger: TGGCGGGGACAGCCTGCAGCCCACAGGCACCTCCCAGCCCGTCCAGGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp GCTTGTGCAAGATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTTaGACTTGCCCTTGCAGAAGGTACAGCGGAAGCCCGCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: ACARCGCGGPAPRAS*TCPCRRYSGSPPPG
Trigger: CCCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCTTGCACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 90 bp CCAATTATGCAAATGGACTCCGGACTGGGAGGCGCGGGATGGATCTaGCGCCGCTACTGTACGAGTTCTCGGAGCAGCCCCGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PIMQMDSGLGGAGWI*RRYCTSSRSSPGPG
Trigger: GCCCGGCCCGGGGCTGCTCCGAGAACTCGTACAGTAGCGGCGTCAGATCCATCCCGCGCCTCCCAGTCCGGAGTCCATTTGCATAATTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS GCA 90 bp TCCTTCATGGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTTaGTGGACGCCGGCAGATCTCCCAGCCTCCTCGCCAATGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SFMAEPRLLSRSSAG*WTPADLPASSPMSE
Trigger: CTCAGACATTGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GGCAGGCCCGCCAAGGGGTCCTGGGCTTGGAGAAGACCCTGGCTGTaGCACTGCTTCTCCGGTGCTTGGGATAAAGGTGAGACCAGTCCC +
Preference number: 5 (lower is better)
Translates to: GRPAKGSWAWRRPWL*HCFSGAWDKGETSP
Trigger: GGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGCGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 90 bp TTCATGGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTTGCTaGACGCCGGCAGATCTCCCAGCCTCCTCGCCAATGTCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: FMAEPRLLSRSSAGC*TPADLPASSPMSEE
Trigger: CTCCTCAGACATTGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp CTCATCTGGGACATGATGCCCAGGTTCTGCCCGTTGAGGAACTGCTaGAAGTCCACCCTCCCGTTGAGGCTGGTGTCCACCTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LIWDMMPRFCPLRNC*KSTLPLRLVSTSRP
Trigger: GGGCCGGGAGGTGGACACCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp CCCGCCAAGGGGTCCTGGGCTTGGAGAAGACCCTGGCTGTGCCACTaGTTCTCCGGTGCTTGGGATAAAGGTGAGACCAGTCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: PAKGSWAWRRPWLCH*FSGAWDKGETSPWT
Trigger: CGTCCAGGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 90 bp TGGAGATGGGAGACAGCAGCTTCCCCAGCGCTTCCTTCTCCTTCATaGGCAGCTCGCCCTTGCCATAGAGCTGGCTGGGCTCGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: WRWETAASPALPSPS*AARPCHRAGWARSG
Trigger: GCCTGAGCGAGCCCAGCCAGCTCTATGGCAAGGGCGAGCTGCCCATGAAGGAGAAGGAAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp GGCTTTGGCAGGCCCGCCAAGGGGTCCTGGGCTTGGAGAAGACCCTaGCTGTGCCACTGCTTCTCCGGTGCTTGGGATAAAGGTGAGACC +
Preference number: 5 (lower is better)
Translates to: GFGRPAKGSWAWRRP*LCHCFSGAWDKGET
Trigger: GGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGCGGGCCTGCCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp TCGGGGAAGGCATGGCTGAGCTGGGAGGTGATCTGGTGCAGCTTCTaGCTCATGGCATACTGGCCGTTGAGGACGGGGCCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SGKAWLSWEVIWCSF*LMAYWPLRTGPLRW
Trigger: CCACCTGAGTGGCCCCGTCCTCAACGGCCAGTATGCCATGAGTCAGAAGCTGCACCAGATCACCTCCCAGCTCAGCCATGCCTTCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp TCGCTCATCTGGGACATGATGCCCAGGTTCTGCCCGTTGAGGAACTaGTGCAAGTCCACCCTCCCGTTGAGGCTGGTGTCCACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLIWDMMPRFCPLRN*CKSTLPLRLVSTSR
Trigger: CCGGGAGGTGGACACCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp TCAGTTGGTCTCCTCCTGGCCCTTGCCGCCCTCTTCCGTGAGGTCTaGAGAGCTCCCCGCCTTGACAGCTGTAGGCTCCTCGAAATTCCC +
Preference number: 5 (lower is better)
Translates to: SVGLLLALAALFREV*RAPRLDSCRLLEIP
Trigger: GGGAATTTCGAGGAGCCTACAGCTGTCAAGGCGGGGAGCTCTGCAGACCTCACGGAAGAGGGCGGCAAGGGCCAGGAGGAGACCAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CCA 90 bp TGGGCTTGGAGAAGACCCTGGCTGTGCCACTGCTTCTCCGGTGCTTaGGATAAAGGTGAGACCAGTCCCTGGACGGGCTGGGAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: WAWRRPWLCHCFSGA*DKGETSPWTGWEVP
Trigger: AGGCACCTCCCAGCCCGTCCAGGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp CCCCGCCTTGACAGCTGTAGGCTCCTCGAAATTCCCAGAAGCCTCTaGGTCGACCCTGGAGCGCTTGAACCTGCGGTCGGGATACTGGCT +
Preference number: 5 (lower is better)
Translates to: PRLDSCRLLEIPRSL*VDPGALEPAVGILA
Trigger: AGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAATTTCGAGGAGCCTACAGCTGTCAAGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 90 bp GCGTCGTCCTCGATGTCGCTCATCTGGGACATGATGCCCAGGTTCTaGCCGTTGAGGAACTGCTGCAAGTCCACCCTCCCGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASSSMSLIWDMMPRF*PLRNCCKSTLPLRL
Trigger: CAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGACATCGAGGACGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 90 bp CATAACGAGGCTGGCTGCAGCCACTGCATGCACTGCGGCCGAAGGTaGCCAGTCTGTACCTCCACAGGGCCGGTTCAATCAGGGAATCCT +
Preference number: 5 (lower is better)
Translates to: HNEAGCSHCMHCGRR*PVCTSTGPVQSGNP
Trigger: AGGATTCCCTGATTGAACCGGCCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS GCA 90 bp ACTGGGCAATTCTTTTCCATAACGAGGCTGGCTGCAGCCACTGCATaGACTGCGGCCGAAGGTGCCCAGTCTGTACCTCCACAGGGCCGG +
Preference number: 5 (lower is better)
Translates to: TGQFFSITRLAAATA*TAAEGAQSVPPQGR
Trigger: CCGGCCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAAAAGAATTGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTCCCTTGCGGTCCCGCTaGTGGACACGGGAGTGCACG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSPLRSR*WTRECT
Trigger: CGTGCACTCCCGTGTCCACAAGCGGGACCGCAAGGG...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTGCCCCCGCTCCGGCTTaGGCAGGCCCGCCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVAPAPA*AGPPRG
Trigger: ACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGGC...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 90 bp ACCCACTGGGCAATTCTTTTCCATAACGAGGCTGGCTGCAGCCACTaGATGCACTGCGGCCGAAGGTGCCCAGTCTGTACCTCCACAGGG +
Preference number: 5 (lower is better)
Translates to: THWAILFHNEAGCSH*MHCGRRCPVCTSTG
Trigger: CCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAAAAGAATTGCCCAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CCA 90 bp GGGTACTTGCGGTTCTTGCGGGCGTCGTCCTCGATGTCGCTCATCTaGGACATGATGCCCAGGTTCTGCCCGTTGAGGAACTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GYLRFLRASSSMSLI*DMMPRFCPLRNCCK
Trigger: CTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGACATCGAGGACGACGCCCGCAAGAACCGCAAGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CCA 90 bp GATGGGATGTCCGGAAAGTTTTCCCACAGTACGGGCAGTCCTTCATaGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: DGMSGKFSHSTGSPS*PSPGFCREAALVAG
Trigger: TCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATGAAGGACTGCCCGTACTGTGGGAAAACTTTCCGGACATCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp GCCTCTGAGTCGACCCTGGAGCGCTTGAACCTGCGGTCGGGATACTaGCTGTTGTCAAAAGGCATGCGATGGACGCAGAGGACATGGGTC +
Preference number: 5 (lower is better)
Translates to: ASESTLERLNLRSGY*LLSKGMRWTQRTWV
Trigger: GACCCATGTCCTCTGCGTCCATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTACACGCCCACGCCCCTaGCCCAGGTTGCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTTRPRP*PRLPSL
Trigger: CAAGCTGGGCAACCTGGGCAAGGGGCGTGGGCGTGT...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTCGCAGCGGAACTCGTaGGCCGACTGCTCGCCACCG +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTSQRNS*ADCSPP
Trigger: CGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTGCGA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTAGCGGCGGCACGAGATaGAGGCATCCCAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSSGGTR*RHPRRE
Trigger: CTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATCCATCTCCGCAGCCTaGGCAGCCGCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLSISAA*AAACSR
Trigger: GCGGCTGCAGGCGGCTGCCAAGGCTGCGGAGATGGA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp CGTGGCCGGTCCATGCACCGCTCTTCTGCTCTCCCAGAGTCTCCTTaGGCTGACCTTGGGCCATCTTCTCAGAAGCAGAGTCTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RGRSMHRSSALPESP*ADLGPSSQKQSLES
Trigger: GCTCTCTAGACTCTGCTTCTGAGAAGATGGCCCAAGGTCAGCTCAAGGAGACTCTGGGAGAGCAGAAGAGCGGTGCATGGACCGGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 90 bp ACCCCGGCGTTTGCCAAAGTGTCTTCGTGGTTGCGCTGCAGCGGATaGTCTTTAGACAAGAAGCCATGTTCCATGGCCATGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TPAFAKVSSWLRCSG*SLDKKPCSMAMPLA
Trigger: GGCCAGGGGCATGGCCATGGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp GCAATTCTTTTCCATAACGAGGCTGGCTGCAGCCACTGCATGCACTaGGGCCGAAGGTGCCCAGTCTGTACCTCCACAGGGCCGGTTCAA +
Preference number: 5 (lower is better)
Translates to: AILFHNEAGCSHCMH*GRRCPVCTSTGPVQ
Trigger: TTGAACCGGCCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAAAAGAATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CCA 90 bp TGGGGACATCCTCTTCAGAGTGGGCCTTTCCATCAGGCTCCTTGTTaGGGCAGGAACTGGAGGCCCCTGAGCCAACCATGCCTGGGTAAA +
Preference number: 5 (lower is better)
Translates to: WGHPLQSGPFHQAPC*GRNWRPLSQPCLGK
Trigger: TTTACCCAGGCATGGTTGGCTCAGGGGCCTCCAGTTCCTGCCCCAACAAGGAGCCTGATGGAAAGGCCCACTCTGAAGAGGATGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTGGGTACTTGCGGTTCTaGCGGGCGTCGTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSGYLRF*RASSSM
Trigger: CATCGAGGACGACGCCCGCAAGAACCGCAAGTACCC...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAGTGGGCACGGGTACTaGCGGTTCTTGCGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTSGHGY*RFLRAS
Trigger: CGACGCCCGCAAGAACCGCAAGTACCCGTGCCCACT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTCCACCCCCAGCCAGGTaGTCCACAGGTGAAGGGATC +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSPPPAR*STGEGI
Trigger: GATCCCTTCACCTGTGGACAACCTGGCTGGGGGTGG...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 90 bp ATTCCCTCAACCCACTGGGCAATTCTTTTCCATAACGAGGCTGGCTaGAGCCACTGCATGCACTGCGGCCGAAGGTGCCCAGTCTGTACC +
Preference number: 5 (lower is better)
Translates to: IPSTHWAILFHNEAG*SHCMHCGRRCPVCT
Trigger: GGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAAAAGAATTGCCCAGTGGGTTGAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTACCTGGAGTACAGGTaGGCGTGGGCCTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTYLEYR*AWASWD
Trigger: GTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTTCGCTCAGGCCGGCTTaGTCCGGGGTCATGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTSLRPA*SGVMKP
Trigger: TGGCTTCATGACCCCGGACAAAGCCGGCCTGAGCGA...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp CTGATGAACAGAGAAGCTTTGCTTGACATCTCATCCTTGTGGTCTTaGTTTGGGGGTTGCCCAGACAGCGGCCCAGCCCCGTTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LMNREALLDISSLWS*FGGCPDSGPAPFCR
Trigger: GCGGCAGAACGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAGACCACAAGGATGAGATGTCAAGCAAAGCTTCTCTGTTCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 90 bp CCGGTCCATGCACCGCTCTTCTGCTCTCCCAGAGTCTCCTTGAGCTaGCCTTGGGCCATCTTCTCAGAAGCAGAGTCTAGAGAGCTGATC +
Preference number: 5 (lower is better)
Translates to: PVHAPLFCSPRVSLS*PWAIFSEAESRELI
Trigger: GATCAGCTCTCTAGACTCTGCTTCTGAGAAGATGGCCCAAGGTCAGCTCAAGGAGACTCTGGGAGAGCAGAAGAGCGGTGCATGGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp GCTCCTCGAAATTCCCAGAAGCCTCTGAGTCGACCCTGGAGCGCTTaGACCTGCGGTCGGGATACTGGCTGTTGTCAAAAGGCATGCGAT +
Preference number: 5 (lower is better)
Translates to: APRNSQKPLSRPWSA*TCGRDTGCCQKACD
Trigger: ATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAATTTCGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CCA 90 bp TTAATTAAAGCGGTAATGTCCACTTTCCTGGCGACCCTCCGTGCGTaGGTTTACTATTTCACCATCAAACCCGACCCCGGCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: LIKAVMSTFLATLRA*VYYFTIKPDPGGGG
Trigger: CCCGCCCCCGCCGGGGTCGGGTTTGATGGTGAAATAGTAAACCCACGCACGGAGGGTCGCCAGGAAAGTGGACATTACCGCTTTAATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTCCTTGTGGTCTTGATTaGGGGGTTGCCCAGACAGCG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSPCGLD*GVAQTA
Trigger: CGCTGTCTGGGCAACCCCCAAATCAAGACCACAAGG...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 90 bp CTCTTCCGATCTCAGAGAAGTGGGTGCTTTTGGAAGGAAGGTCAGTaGCTTTCAGAGCATCTGAGGGGACCTCCGAAGACATGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: LFRSQRSGCFWKEGQ*LSEHLRGPPKTCPW
Trigger: CCACGGGCATGTCTTCGGAGGTCCCCTCAGATGCTCTGAAAGGCACTGACCTTCCTTCCAAAAGCACCCACTTCTCTGAGATCGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 90 bp CAGGCTCCTTGTTGGGGCAGGAACTGGAGGCCCCTGAGCCAACCATaGCTGGGTAAACACCAAACTGCTTGTAGAAGTCTGATGGGAAGT +
Preference number: 5 (lower is better)
Translates to: QAPCWGRNWRPLSQP*LGKHQTACRSLMGS
Trigger: ACTTCCCATCAGACTTCTACAAGCAGTTTGGTGTTTACCCAGGCATGGTTGGCTCAGGGGCCTCCAGTTCCTGCCCCAACAAGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 90 bp GATTGTAACGAGGGCAGCAGGGCCATCTTACTCGCCTCCCGGGCTTaGTCTTTGCAGTTGACTGTGACCCCGATGGTGTTATCTTTGCGT +
Preference number: 5 (lower is better)
Translates to: DCNEGSRAILLASRA*SLQLTVTPMVLSLR
Trigger: ACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCTGCCCTCGTTACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTAGCTCCTCGCGCTTCTaGAACTTGCCCTTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSSSSRF*NLPLQK
Trigger: CTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATCCCGGGCTTGGTCTTaGCAGTTGACTGTGACCCCG +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLSRAWS*QLTVTP
Trigger: CGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 90 bp CCAGGGGTTCATACTGAGATTTCTCGGACTTCCTCTGGGAGGACTTaGCACTGGGTTTCTCCTCACCACCATCCACTCCGTGGACTTTCA +
Preference number: 5 (lower is better)
Translates to: PGVHTEISRTSSGRT*HWVSPHHHPLRGLS
Trigger: TGAAAGTCCACGGAGTGGATGGTGGTGAGGAGAAACCCAGTGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTCAGTATGAACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCAAAGTGTCTTCGTGGTaGCGCTGCAGCGGATGCTCT +
Preference number: 5 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTKVSSW*RCSGCS
Trigger: AGAGCATCCGCTGCAGCGCAACCACGAAGACACTTT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 90 bp TCAAACAGAACCCCGGCGTTTGCCAAAGTGTCTTCGTGGTTGCGCTaGAGCGGATGCTCTTTAGACAAGAAGCCATGTTCCATGGCCATG +
Preference number: 5 (lower is better)
Translates to: SNRTPAFAKVSSWLR*SGCSLDKKPCSMAM
Trigger: CATGGCCATGGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTTTCTTCACCGACAGCTaGTTGAGGTGGACCTTCATG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSFFTDS*LRWTFM
Trigger: CATGAAGGTCCACCTCAACAAGCTGTCGGTGAAGAA...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTCTCATCCTTGTGGTCTaGATTTGGGGGTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTLILVV*IWGLPR
Trigger: TCTGGGCAACCCCCAAATCAAGACCACAAGGATGAG...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAGCTTGGTCTTTGCAGTaGACTGTGACCCCGATGGTG +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLAWSLQ*TVTPMV
Trigger: CACCATCGGGGTCACAGTCAACTGCAAAGACCAAGC...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGATAACCACCGAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTGGCCCAGGTCTTTGTTaGATTGTAACGAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: QITTEDHEQTRASPDRPTGPGLC*IVTRAA
Trigger: TGCTGCCCTCGTTACAATCAAACAAAGACCTGGGCC...AGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTCGGTGGTTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACAGGACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCACATCCTCTTCATCGTaGTTCTCCCCCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TGQSDTSSNTHETTAGPTTSSSS*FSPLEE
Trigger: CTCCTCCAAGGGGGAGAACAACGATGAAGAGGATGT...GGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGCCCCCGCTCCGGCTTaGGCAGGCCCGCCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIAPAPA*AGPPRG
Trigger: ACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGGC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp GTGTTATCTTTGCGTTTCGCTTTGCCCAGGTGGTTGGCCTGGAGATaGAGGGCCATGAGCTCCATGGAGGACGTTGTGAAAGCACAAAAC +
Preference number: 5 (lower is better)
Translates to: VLSLRFALPRWLAWR*RAMSSMEDVVKAQN
Trigger: GTTTTGTGCTTTCACAACGTCCTCCATGGAGCTCATGGCCCTTCATCTCCAGGCCAACCACCTGGGCAAAGCGAAACGCAAAGATAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp CCCCGTTCCCAGGCAAGTCTTAAAGCAATGGATCTCCCTCCCGGTTaGAGGATATTCTTAAAGCCGTGGTGGTCAGGAATTGGCACTTGC +
Preference number: 5 (lower is better)
Translates to: PRSQASLKAMDLPPG*RIFLKPWWSGIGTC
Trigger: GCAAGTGCCAATTCCTGACCACCACGGCTTTAAGAATATCCTTCAACCGGGAGGGAGATCCATTGCTTTAAGACTTGCCTGGGAACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585628.5
CDS CCA 90 bp GTTCATACTGAGATTTCTCGGACTTCCTCTGGGAGGACTTGCCACTaGGTTTCTCCTCACCACCATCCACTCCGTGGACTTTCATGGAAG +
Preference number: 5 (lower is better)
Translates to: VHTEISRTSSGRTCH*VSPHHHPLRGLSWK
Trigger: CTTCCATGAAAGTCCACGGAGTGGATGGTGGTGAGGAGAAACCCAGTGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTCAGTATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 90 bp TCAGGGAATCCTACTGCCCTTCCACCTCCACTGCAGCTGCTTTCCTaGACACTGTCAGTCTGGAAGGTAGCATCAAATACTCATCTCAGG +
Preference number: 5 (lower is better)
Translates to: SGNPTALPPPLQLLS*TLSVWKVASNTHLR
Trigger: CCTGAGATGAGTATTTGATGCTACCTTCCAGACTGACAGTGTCCAGGAAAGCAGCTGCAGTGGAGGTGGAAGGGCAGTAGGATTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACGCCCCTTGCCCAGGTaGCCCAGCTTGTGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIRPLPR*PSLWVR
Trigger: GCGGACCCACAAGCTGGGCAACCTGGGCAAGGGGCG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTGCACGCTGGCAGGCTaGGGCGAGGGCACCGGGTGG +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIICTLAG*GEGTGW
Trigger: CCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 90 bp TTCTCCTTATCAAACAGAACCCCGGCGTTTGCCAAAGTGTCTTCGTaGTTGCGCTGCAGCGGATGCTCTTTAGACAAGAAGCCATGTTCC +
Preference number: 5 (lower is better)
Translates to: FSLSNRTPAFAKVSS*LRCSGCSLDKKPCS
Trigger: GGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGATAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 90 bp CAATGCTTTGATAAGCTCTTCCGATCTCAGAGAAGTGGGTGCTTTTaGAAGGAAGGTCAGTGCCTTTCAGAGCATCTGAGGGGACCTCCG +
Preference number: 5 (lower is better)
Translates to: QCFDKLFRSQRSGCF*KEGQCLSEHLRGPP
Trigger: CGGAGGTCCCCTCAGATGCTCTGAAAGGCACTGACCTTCCTTCCAAAAGCACCCACTTCTCTGAGATCGGAAGAGCTTATCAAAGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCCCAGGAGGGAGTGCTaGTCCCCCTCCGGGACGCCG +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFPRREC*SPSGTP
Trigger: CGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 90 bp ATCCTCTTCATCGTTGTTCTCCCCCTTGGAGGAGTCCATGTCCTCTaGGGAGGCAATGTCAGAGAGGTCATCAGTAGTGTTCTTACTCGT +
Preference number: 5 (lower is better)
Translates to: ILFIVVLPLGGVHVL*GGNVREVISSVLTR
Trigger: ACGAGTAAGAACACTACTGATGACCTCTCTGACATTGCCTCCTCAGAGGACATGGACTCCTCCAAGGGGGAGAACAACGATGAAGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAATGGCATACTGGCCGTaGAGGACGGGGCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSMAYWP*RTGPLR
Trigger: CCTGAGTGGCCCCGTCCTCAACGGCCAGTATGCCAT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATGGCTTCTCCTCGGGGTaGGGCCGGGGATGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDGFSSG*GRGWSS
Trigger: CGAGCTCCATCCCCGGCCCAACCCCGAGGAGAAGCC...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATACTGCCTTTCAGCTGCTaGTCCCGCAGGATGGCGCGC +
Preference number: 5 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPILPFSC*SRRMAR
Trigger: GCGCGCCATCCTGCGGGACAAGCAGCTGAAAGGCAG...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTGGGTCGCTGGGGGACTaGTTCTTCACCGACAGCTTG +
Preference number: 5 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVGSLGD*FFTDSL
Trigger: CAAGCTGTCGGTGAAGAACAAGTCCCCCAGCGACCC...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GAGGACCACGAACAGACAAGGGCAAGTCCAGATAGACCGACTAGGACAGGGAGTATGAACAGAGAAGCTTaGCTTGACATCTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: EDHEQTRASPDRPTRTGSMNREA*LDISSL
Trigger: CAAGGATGAGATGTCAAGCAAAGCTTCTCTGTTCAT...ACTCCCTGTCCTAGTCGGTCTATCTGGACTTGCCCTTGTCTGTTCGTGGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACTCGACCCTGGAGCGCTaGAACCTGCGGTCGGGATAC +
Preference number: 5 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYSTLER*NLRSGY
Trigger: GTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGA...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 90 bp CCAGTCGGCAATATTCCTTTCAGCCTCATGATTCTAGTGTGCTGTTaGCCATTCCCTCAACCCACTGGGCAATTCTTTTCCATAACGAGG +
Preference number: 5 (lower is better)
Translates to: PVGNIPFSLMILVCC*PFPQPTGQFFSITR
Trigger: CCTCGTTATGGAAAAGAATTGCCCAGTGGGTTGAGGGAATGGGCAACAGCACACTAGAATCATGAGGCTGAAAGGAATATTGCCGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CCA 90 bp AAGCAAGGTTTTGGTCACTTGAGTCCAGATCCTATGATGACAACGTaGAAACTCTCTTCTCCAGACTCACCTCCCCTGTTCCAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: KQGFGHLSPDPMMTT*KLSSPDSPPLFQSW
Trigger: CCAGCTTTGGAACAGGGGAGGTGAGTCTGGAGAAGAGAGTTTCCACGTTGTCATCATAGGATCTGGACTCAAGTGACCAAAACCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTAACAGAGAAGCTTTGCTaGACATCTCATCCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLTEKLC*TSHPCG
Trigger: ACCACAAGGATGAGATGTCAAGCAAAGCTTCTCTGT...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAGTCTCCTCCTGGCCCTaGCCGCCCTCTTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRVSSWP*PPSSVR
Trigger: CCTCACGGAAGAGGGCGGCAAGGGCCAGGAGGAGAC...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTAAACAAGAAAGCAGCTaGCTCTATGCCAGATGGGTC +
Preference number: 5 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVKQESS*LYARWV
Trigger: GACCCATCTGGCATAGAGCAAGCTGCTTTCTTGTTT...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS TCA 90 bp TACTCATCTCAGGCAAGTCTTAAAGCAATGGATCTCCCTCCCGGTTaGAGGATATTCTTAAAGCCGTGGTGGTCAGGAATTGGCACTTGC +
Preference number: 5 (lower is better)
Translates to: YSSQASLKAMDLPPG*RIFLKPWWSGIGTC
Trigger: GCAAGTGCCAATTCCTGACCACCACGGCTTTAAGAATATCCTTCAACCGGGAGGGAGATCCATTGCTTTAAGACTTGCCTGAGATGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCATCCTCCTCGCCCTaGCGGTCCCGCTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPSSSP*RSRLWT
Trigger: TGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGTCTTGATTTGGGGGTaGCCCAGACAGCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIVLIWG*PRQRPS
Trigger: GCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAGAC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCAAGGGGTCCTGGGCTaGGAGAAGACCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIQGVLG*EKTLAV
Trigger: CACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATCAGGATTTATGACTTaGAGGGAGTTTTCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLSGFMT*REFSLL
Trigger: CAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGAGCAGAGCTCCCCGCCTaGACAGCTGTAGGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRAELPA*TAVGSS
Trigger: CGAGGAGCCTACAGCTGTCAAGGCGGGGAGCTCTGC...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTTCGCGCTTCTTGAACTaGCCCTTGCAGAAGGTACAG +
Preference number: 5 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVSRFLN*PLQKVQ
Trigger: CTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGA...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATATCTTTGCGTTTCGCTTaGCCCAGGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPISLRFA*PRWLAW
Trigger: CCAGGCCAACCACCTGGGCAAAGCGAAACGCAAAGA...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CAGTTGTCACTCAGGATTTATGACTTTGAGGGAGTTTTCTCTCCTGCTCAAGTTGAGAGGCCCAGGTCTTaGTTTGATTGTAACGAGGGC +
Preference number: 5 (lower is better)
Translates to: QLSLRIYDFEGVFSPAQVERPRS*FDCNEG
Trigger: GCCCTCGTTACAATCAAACAAAGACCTGGGCCTCTC...AACTTGAGCAGGAGAGAAAACTCCCTCAAAGTCATAAATCCTGAGTGACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTTTTGGAAGTACTTGTaGCCGGGTAACAGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVFWKYL*PGNSLA
Trigger: TGCTAAACTGTTACCCGGCAACAAGTACTTCCAAAA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp ATGCCAGATGGGTCCAAGTTGCACAGCGACCTCATTTACACTGAAACCTCGGTTTCACAAACAGAATTATaGCCTGTCGCATCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: MPDGSKLHSDLIYTETSVSQTEL*PVASED
Trigger: ATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGA...AACCGAGGTTTCAGTGTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCCCAGGTTCTGCCCGTaGAGGAACTGCTGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFPRFCP*RNCCKS
Trigger: GGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCATTCACCGACAGCTTGTaGAGGTGGACCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSFTDSL*RWTFMW
Trigger: CCACATGAAGGTCCACCTCAACAAGCTGTCGGTGAA...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTGGGTCAGCCAGGGCTTaGTCCTTCATGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIGSARA*SFMSFS
Trigger: GGAGAAGGACATGAAGGACAAAGCCCTGGCTGACCC...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GACAATCAGACACAAGCAGTAATACCCACGAGACCACTGCAGGACCCACCTCTATATATATACTGTAGATaGGTGCACCGTGTGTATACA +
Preference number: 5 (lower is better)
Translates to: DNQTQAVIPTRPLQDPPLYIYCR*VHRVYT
Trigger: TGTATACACACGGTGCACCAATCTACAGTATATATA...TAGAGGTGGGTCCTGCAGTGGTCTCGTGGGTATTACTGCTTGTGTCTGATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACCCCACCTGCATTGTTTaGGAAGTACTTGTTGCCGGG +
Preference number: 5 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYPTCIV*EVLVAG
Trigger: CCCGGCAACAAGTACTTCCAAAACAATGCAGGTGGG...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS TCA 90 bp TGTGCAGTTTATAGTGGCAAACTATTGCCCCTCAGTTGGGAAAAATaGCCTCCAGTCGGCAATATTCCTTTCAGCCTCATGATTCTAGTG +
Preference number: 5 (lower is better)
Translates to: CAVYSGKLLPLSWEK*PPVGNIPFSLMILV
Trigger: CACTAGAATCATGAGGCTGAAAGGAATATTGCCGACTGGAGGTCATTTTTCCCAACTGAGGGGCAATAGTTTGCCACTATAAACTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS GCA 90 bp CTTAACTGCATACTTGTCTTAAGGACTGTCAGTCTGGTGAGAAAATaGCCCAGAAAGGATAAAGTTGGTGCAGGCACTGACAGATTGCAA +
Preference number: 5 (lower is better)
Translates to: LNCILVLRTVSLVRK*PRKDKVGAGTDRLQ
Trigger: TTGCAATCTGTCAGTGCCTGCACCAACTTTATCCTTTCTGGGGCATTTTCTCACCAGACTGACAGTCCTTAAGACAAGTATGCAGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585628.5
ENST00000591488.1
CDS-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCATTCTTGAACTTGCCCTaGCAGAAGGTACAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSFLNLP*QKVQRK
Trigger: CTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAA...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTAAGGGTCGAGCTTACTaGGCAGGTCTCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFKGRAY*AGLSGC
Trigger: GCAGCCAGAGAGACCTGCCAAGTAAGCTCGACCCTT...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATACTCGCCTCCCGGGCTaGGTCTTTGCAGTTGACTGT +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDTRLPG*VFAVDC
Trigger: ACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGT...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAAGAGAGCTGATCATATaGGAGAGGCCCAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSRELII*ERPRSL
Trigger: CAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCT...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTTCGTTGTTCTCCCCCTaGGAGGAGTCCATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIISLFSP*EESMSS
Trigger: AGAGGACATGGACTCCTCCAAGGGGGAGAACAACGA...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTAGGGCAGACAGTGGCTaGGTCATCATTTCCGGTTCG +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIRADSG*VIISGS
Trigger: CGAACCGGAAATGATGACCAAGCCACTGTCTGCCCT...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTACAGAACCCCGGCGTTaGCCAAAGTGTCTTCGTGGT +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFTEPRR*PKCLRG
Trigger: ACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGT...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp CTGTTCCAAAGCACACGATCACCCCGTACAAGTTTACATATTTTGCTTCAATCAGTCATCCAGCAGCAGTaGTCACTCAGGATTTATGAC +
Preference number: 5 (lower is better)
Translates to: LFQSTRSPRTSLHILLQSVIQQQ*SLRIYD
Trigger: GTCATAAATCCTGAGTGACAACTGCTGCTGGATGAC...TGATTGAAGCAAAATATGTAAACTTGTACGGGGTGATCGTGTGCTTTGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCCGATGGTGTTATCTTaGCGTTTCGCTTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDPMVLS*RFALPR
Trigger: CCTGGGCAAAGCGAAACGCAAAGATAACACCATCGG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGATCGGGATACTGGCTGTaGTCAAAAGGCATGCGATGG +
Preference number: 5 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRSGYWL*SKGMRW
Trigger: CCATCGCATGCCTTTTGACAACAGCCAGTATCCCGA...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp TCCATCTTCAACGCAACACTAAATCGTTTAGATGGTATCGTTTTTCAGTTAAGACCAGATGGGTCCAAGTaGCACAGCGACCTCATTTAC +
Preference number: 5 (lower is better)
Translates to: SIFNATLNRLDGIVFQLRPDGSK*HSDLIY
Trigger: GTAAATGAGGTCGCTGTGCAACTTGGACCCATCTGG...TCTTAACTGAAAAACGATACCATCTAAACGATTTAGTGTTGCGTTGAAGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 90 bp AAAACATATACTGACTGCAATGTGCAGTTTATAGTGGCAAACTATTaGCCCTCAGTTGGGAAAAATGACCTCCAGTCGGCAATATTCCTT +
Preference number: 5 (lower is better)
Translates to: KTYTDCNVQFIVANY*PSVGKNDLQSAIFL
Trigger: AAGGAATATTGCCGACTGGAGGTCATTTTTCCCAACTGAGGGGCAATAGTTTGCCACTATAAACTGCACATTGCAGTCAGTATATGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS-3UTR CAA 90 bp GCTATATATACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTTGCTCACAATGCTTaGATAAGCTCTTCCGATCTC +
Preference number: 5 (lower is better)
Translates to: AIYTVDWCTVCIHIPMPIVAHNA*ISSSDL
Trigger: GAGATCGGAAGAGCTTATCAAAGCATTGTGAGCAAC...TATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGTATATATAGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATAGCTTGCAAGGACCCTaGGAAATTCACACCGTTGCT +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDSLQGP*EIHTVA
Trigger: AGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCT...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACTTTCTCCCACCTGCATaGTTTTGGAAGTACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYFLPPA*FWKYLL
Trigger: CAACAAGTACTTCCAAAACAATGCAGGTGGGAGAAA...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp GTGTCACAAACAGAATTATTGCCTGTCGCATCTGAGGATGCTGAAAAGACACAATGTGTGGTGCAGAACTaGATAAATTTGGAGTATCCA +
Preference number: 5 (lower is better)
Translates to: VSQTELLPVASEDAEKTQCVVQN*INLEYP
Trigger: TGGATACTCCAAATTTATCAAGTTCTGCACCACACA...TTGTGTCTTTTCAGCATCCTCAGATGCGACAGGCAATAATTCTGTTTGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp TTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTTTAGCCTCTGATCGCTTCTTCCATCCCTaGAGAACAGGGAAAATGGAA +
Preference number: 5 (lower is better)
Translates to: LQSMTNTGTYGVIFLASDRFFHP*RTGKME
Trigger: TTCCATTTTCCCTGTTCTCAAGGGATGGAAGAAGCG...ATCAGAGGCTAAAAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAATTGCAATATACAGGTaGGTCTGCTCAGTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSIAIYR*VCSVGL
Trigger: GAGACCAACTGAGCAGACCAACCTGTATATTGCAAT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATTAGATGACACCCTTTaGACAGCATATGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSLDDTL*TAYANR
Trigger: CCGGTTTGCATATGCTGTCAAAAGGGTGTCATCTAA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTCAAGGTTTTGGTCACTaGAGTCCAGATCCTATGATG +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFQGFGH*SPDPMM
Trigger: CATCATAGGATCTGGACTCAAGTGACCAAAACCTTG...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp GTTACTAAGCCTTTGCAATCCATGACTAATACTGGAACATATGGGGTAATATTTACTGTCCATGAAAGCTaGCAAGGACCCTTGGAAATT +
Preference number: 5 (lower is better)
Translates to: VTKPLQSMTNTGTYGVIFTVHES*QGPLEI
Trigger: AATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGT...AAATATTACCCCATATGTTCCAGTATTAGTCATGGATTGCAAAGGCTTAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS-3UTR CAA 90 bp TTGCGTAGGAATGTAGACAGTATTATGACCAGCATCACAGACTACAGAAGTTACGTGGCTGTCACTTGTTaGTATTACAAGTTACAAATG +
Preference number: 5 (lower is better)
Translates to: LRRNVDSIMTSITDYRSYVAVTC*YYKLQM
Trigger: CATTTGTAACTTGTAATACAAACAAGTGACAGCCAC...GTAACTTCTGTAGTCTGTGATGCTGGTCATAATACTGTCTACATTCCTACGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCATTGTTTTGGAAGTACTaGTTGCCGGGTAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSLFWKY*LPGNSL
Trigger: TAAACTGTTACCCGGCAACAAGTACTTCCAAAACAA...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp AAACACAGTAGTGCAGTCAAAATCCTAAAGCTTACTACAGTCGGAAAGTTTTCAAATCCTCTACTCCTATaGATCTCAGATTTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: KHSSAVKILKLTTVGKFSNPLLL*ISDFLQ
Trigger: TTGGAGGAAATCTGAGATCAATAGGAGTAGAGGATT...TGAAAACTTTCCGACTGTAGTAAGCTTTAGGATTTTGACTGCACTACTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS-3UTR CAA 90 bp ACTGTAGATTGGTGCACCGTGTGTATACACATACCTATGCCAATAGTAATTATTCAAGTTACTAAGCCTTaGCAATCCATGACTAATACT +
Preference number: 5 (lower is better)
Translates to: TVDWCTVCIHIPMPIVIIQVTKP*QSMTNT
Trigger: AGTATTAGTCATGGATTGCAAAGGCTTAGTAACTTG...AATAATTACTATTGGCATAGGTATGTGTATACACACGGTGCACCAATCTACAGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp CCGGGGCCACCGCGTCCTCCTGCACGCTGGCAGGCTTaGGCGAGGGCACCGGGTGGGCCACGTCGGGAACGC +
Preference number: 6 (lower is better)
Translates to: PGPPRPPARWQA*ARAPGGPRRER
Trigger: GCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp GCCGGGGCCACCGCGTCCTCCTGCACGCTGGCAGGCTaGGGCGAGGGCACCGGGTGGGCCACGTCGGGAACG +
Preference number: 6 (lower is better)
Translates to: AGATASSCTLAG*GEGTGWATSGT
Trigger: CGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp GGCGAGGGCACCGGGTGGGCCACGTCGGGAACGCTGTaGTTAGCCTGCAGGGCCAGGGTGCAGGCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GEGTGWATSGTL*LACRARVQAAS
Trigger: GCTGGCCGCCTGCACCCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp GAGGGGTGCGGGCTGTCCTCCTGGGCACTCCCGGTCTaGGAGAGGCCGCCTCCGACCCCGCTCTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: EGCGLSSWALPV*ERPPPTPLSSV
Trigger: CACCGAGGAGAGCGGGGTCGGAGGCGGCCTCTCCCAGACCGGGAGTGCCCAGGAGGACAGCCCGCACCCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp AAGCCCGCCGCCGGGGCCACCGCGTCCTCCTGCACGCTGGCAGGCTaGGGCGAGGGCACCGGGTGGGCCACGTCGGGAACGCTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: KPAAGATASSCTLAG*GEGTGWATSGTLWL
Trigger: TAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGGCGGCGGGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CCCGGCGTGGTGGAGCGGCTCACCGACTGGGACTCCTaGTCACTGCCCGAGCCACGCCGCTCATCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: PGVVERLTDWDS*SLPEPRRSSRP
Trigger: GGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CGAGTTCTCGGAGCAGCCCCGGGCCGGGCAGATTTATaGGGGCGCGTCACGGCTACGCCAGGTCCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RVLGAAPGRADL*GRVTATPGPAA
Trigger: GGCGGCGGGACCTGGCGTAGCCGTGACGCGCCCCCATAAATCTGCCCGGCCCGGGGCTGCTCCGAGAACTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp CAGCGGAACTCGTTGGCCGACTGCTCGCCACCGCCGTaGGGGCCCTGGCCCTGGGCCGACTCGGCCGTGATG +
Preference number: 6 (lower is better)
Translates to: QRNSLADCSPPP*GPWPWADSAVM
Trigger: CATCACGGCCGAGTCGGCCCAGGGCCAGGGCCCCAACGGCGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CCCGGCCCAGCTGGTTGGCCAGGAGCGCCATCTGACTaGCCATGGGCTGGCCGCTCATGGGCACGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PGPAGWPGAPSD*PWAGRSWARGP
Trigger: AGGCCCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp GCGGGGGCTTCAGGTCCGGCCGGGGCTGCAGCAGGCTaGCTTTCAGCTGCTTGTCCCGCAGGATGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: AGASGPAGAAAG*LSAACPAGWRA
Trigger: AGCGCGCCATCCTGCGGGACAAGCAGCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCTGAAGCCCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp CACACCTCGCAGCGGAACTCGTTGGCCGACTGCTCGCCACCGCCGTaGGGGCCCTGGCCCTGGGCCGACTCGGCCGTGATGTGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: HTSQRNSLADCSPPP*GPWPWADSAVMCAF
Trigger: GAAGGCACACATCACGGCCGAGTCGGCCCAGGGCCAGGGCCCCAACGGCGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTGCGAGGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 72 bp ACCTCCCGGCCCAGCTGGTTGGCCAGGAGCGCCATCTaGCTGCCCATGGGCTGGCCGCTCATGGGCACGTGG +
Preference number: 6 (lower is better)
Translates to: TSRPSWLARSAI*LPMGWPLMGTW
Trigger: CCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp AGGTCCGGCCGGGGCTGCAGCAGGCTGCCTTTCAGCTaGTTGTCCCGCAGGATGGCGCGCTCCTCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: RSGRGCSRLPFS*LSRRMARSSSS
Trigger: CGAGCTGGAGGAGCGCGCCATCCTGCGGGACAAGCAGCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TCACTGCCCGAGCCACGCCGCTCATCCAGGCCCACGTaGAGCCCATCCTCCTCGCCCTTGCGGTCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: SLPEPRRSSRPT*SPSSSPLRSRL
Trigger: CAAGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp TCCTGCACGCTGGCAGGCTTGGGCGAGGGCACCGGGTaGGCCACGTCGGGAACGCTGTGGTTAGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SCTLAGLGEGTG*ATSGTLWLACR
Trigger: CCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTCGCCCAAGCCTGCCAGCGTGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp GGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTaGCTGGACGCCGGCAGATCTCCCAGCCTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: GRAQASVAKQRW*LDAGRSPSLLA
Trigger: GGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp CCACGCCGCTCATCCAGGCCCACGTGCAGCCCATCCTCCTCGCCCTaGCGGTCCCGCTTGTGGACACGGGAGTGCACGACCACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PRRSSRPTCSPSSSP*RSRLWTRECTTTWW
Trigger: CCACCAGGTGGTCGTGCACTCCCGTGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GGGCCCCCGCTCCGGCTTTGGCAGGCCCGCCAAGGGGTCCTGGGCTaGGAGAAGACCCTGGCTGTGCCACTGCTTCTCCGGTGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: GPPLRLWQARQGVLG*EKTLAVPLLLRCLG
Trigger: TCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 72 bp GCAGGCGGTTCTCCTCGCGCACACGCCCACGCCCCTTaGCCAGGTTGCCCAGCTTGTGGGTCCGCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: AGGSPRAHAHAP*PGCPACGSAGE
Trigger: TTCACCTGCGGACCCACAAGCTGGGCAACCTGGGCAAGGGGCGTGGGCGTGTGCGCGAGGAGAACCGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp AGCGGCGGCACGAGATTGAGGCATCCCAGGAGGGAGTaGTTGTCCCCCTCCGGGACGCCGTGGGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SGGTRLRHPRRE*LSPSGTPWAML
Trigger: CAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TGGTGGAGCGGCTCACCGACTGGGACTCCTGGTCACTaGCCGAGCCACGCCGCTCATCCAGGCCCACGTGCA +
Preference number: 6 (lower is better)
Translates to: WWSGSPTGTPGH*PSHAAHPGPRA
Trigger: TGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp GCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTTaGTGGACGCCGGCAGATCTCCCAGCCTCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: AEPRLLSRSSAG*WTPADLPASSP
Trigger: TGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp ACAGGTTGGCGTGGGCCTCCTGGGACATGCCGCCCATaGGCACAGGCACCTCGGGGTCGCTGGGGGACTTGT +
Preference number: 6 (lower is better)
Translates to: TGWRGPPGTCRP*AQAPRGRWGTC
Trigger: ACAAGTCCCCCAGCGACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CCCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCGTaGGCCATGCTGGAGATGGGAGACAGCAGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PRRECLSPSGTP*AMLEMGDSSFP
Trigger: GGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp TTAGAGGAGCCCGGCGTGGTGGAGCGGCTCACCGACTaGGACTCCTGGTCACTGCCCGAGCCACGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: LEEPGVVERLTD*DSWSLPEPRRS
Trigger: TGAGCGGCGTGGCTCGGGCAGTGACCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGGCTCCTCTAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp GGCGGCACGAGATTGAGGCATCCCAGGAGGGAGTGCTaGTCCCCCTCCGGGACGCCGTGGGCCATGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GGTRLRHPRREC*SPSGTPWAMLE
Trigger: CTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp ATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTTGAACTTGCCCTaGCAGAAGGTACAGCGGAAGCCCGCCGCCGGGGCCACCGCGTCC +
Preference number: 6 (lower is better)
Translates to: MRMWRSSSSRFLNLP*QKVQRKPAAGATAS
Trigger: GGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GCCTGCAGCCGCTCGATGCAGCTGGATTTCAGCGGCGGCACGAGATaGAGGCATCCCAGGAGGGAGTGCTTGTCCCCCTCCGGGACGCCG +
Preference number: 6 (lower is better)
Translates to: ACSRSMQLDFSGGTR*RHPRRECLSPSGTP
Trigger: CGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCCAGCTGCATCGAGCGGCTGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp GGGAGTGCTTGTCCCCCTCCGGGACGCCGTGGGCCATaGTGGAGATGGGAGACAGCAGCTTCCCCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: GSACPPPGRRGP*WRWETAASPAL
Trigger: AAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TTCACGGGGTCCATCTCCGCAGCCTTGGCAGCCGCCTaGAGCCGCTCGATGCAGCTGGATTTCAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: FTGSISAALAAA*SRSMQLDFSGG
Trigger: GCCGCCGCTGAAATCCAGCTGCATCGAGCGGCTGCAGGCGGCTGCCAAGGCTGCGGAGATGGACCCCGTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TGTGGACACGGGAGTGCACGACCACCTGGTGGTAAGTaGGGAACACCCGGCCGCAGTCGGGGCACTCGGTGG +
Preference number: 6 (lower is better)
Translates to: CGHGSARPPGGK*GTPGRSRGTRW
Trigger: CCACCGAGTGCCCCGACTGCGGCCGGGTGTTCCGCACTTACCACCAGGTGGTCGTGCACTCCCGTGTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CATCCAGGCCCACGTGCAGCCCATCCTCCTCGCCCTTaGGGTCCCGCTTGTGGACACGGGAGTGCACGACCA +
Preference number: 6 (lower is better)
Translates to: HPGPRAAHPPRP*GPACGHGSARP
Trigger: TGGTCGTGCACTCCCGTGTCCACAAGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CCAGCTGGTTGGCCAGGAGCGCCATCTGACTGCCCATaGGCTGGCCGCTCATGGGCACGTGGGCCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PAGWPGAPSDCP*AGRSWARGPSP
Trigger: AGGAGAAGGCCCACGTGCCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CCA 72 bp GAGAGGTACCTGGAGTACAGGTTGGCGTGGGCCTCCTaGGACATGCCGCCCATGGGCACAGGCACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: ERYLEYRLAWAS*DMPPMGTGTSG
Trigger: CCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CATGGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTaGTTGCTGGACGCCGGCAGATCTCCCAGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HGRAQASVAKQR*LLDAGRSPSLL
Trigger: GAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp TGGCGGTCCAGCTCCTCGCGCTTCTTGAACTTGCCCTaGCAGAAGGTACAGCGGAAGCCCGCCGCCGGGGCC +
Preference number: 6 (lower is better)
Translates to: WRSSSSRFLNLP*QKVQRKPAAGA
Trigger: GGCCCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CTCCTCCTGGCCCTTGCCGCCCTCTTCCGTGAGGTCTaGAGAGCTCCCCGCCTTGACAGCTGTAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLLALAALFREV*RAPRLDSCRLL
Trigger: GAGGAGCCTACAGCTGTCAAGGCGGGGAGCTCTGCAGACCTCACGGAAGAGGGCGGCAAGGGCCAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CCA 72 bp AGTGCTTGTCCCCCTCCGGGACGCCGTGGGCCATGCTaGAGATGGGAGACAGCAGCTTCCCCAGCGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SACPPPGRRGPC*RWETAASPALP
Trigger: AGGAAGCGCTGGGGAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp GAGCCCAGGCTTCTGTCGCGAAGCAGCGCTGGTTGCTaGACGCCGGCAGATCTCCCAGCCTCCTCGCCAATG +
Preference number: 6 (lower is better)
Translates to: EPRLLSRSSAGC*TPADLPASSPM
Trigger: CATTGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp TGCAAGATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTTGAACTaGCCCTTGCAGAAGGTACAGCGGAAGCCCGCCGCCGGGGCCACC +
Preference number: 6 (lower is better)
Translates to: CKMRMWRSSSSRFLN*PLQKVQRKPAAGAT
Trigger: GGTGGCCCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GATTTCAGCGGCGGCACGAGATTGAGGCATCCCAGGAGGGAGTGCTaGTCCCCCTCCGGGACGCCGTGGGCCATGCTGGAGATGGGAGAC +
Preference number: 6 (lower is better)
Translates to: DFSGGTRLRHPRREC*SPSGTPWAMLEMGD
Trigger: GTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CCAGCGCTTCCTTCTCCTTCATGGGCAGCTCGCCCTTaGCATAGAGCTGGCTGGGCTCGCTCAGGCCGGCTT +
Preference number: 6 (lower is better)
Translates to: PALPSPSWAARP*HRAGWARSGRL
Trigger: AAGCCGGCCTGAGCGAGCCCAGCCAGCTCTATGGCAAGGGCGAGCTGCCCATGAAGGAGAAGGAAGCGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp CGCTTGCCGCAGAGTGGGCACGGGTACTTGCGGTTCTaGCGGGCGTCGTCCTCGATGTCGCTCATCTGGGAC +
Preference number: 6 (lower is better)
Translates to: RLPQSGHGYLRF*RASSSMSLIWD
Trigger: GTCCCAGATGAGCGACATCGAGGACGACGCCCGCAAGAACCGCAAGTACCCGTGCCCACTCTGCGGCAAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CAA 72 bp CGGATGTGGCGGTCCAGCTCCTCGCGCTTCTTGAACTaGCCCTTGCAGAAGGTACAGCGGAAGCCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RMWRSSSSRFLN*PLQKVQRKPAA
Trigger: GGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GGCTTGTGCAAGATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTaGAACTTGCCCTTGCAGAAGGTACAGCGGAAGCCCGCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: GLCKMRMWRSSSSRF*NLPLQKVQRKPAAG
Trigger: CCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCTTGCACAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GTCATGAAGCCACTCTGCAGGCAGGAGAGGTACCTGGAGTACAGGTaGGCGTGGGCCTCCTGGGACATGCCGCCCATGGGCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: VMKPLCRQERYLEYR*AWASWDMPPMGTGT
Trigger: GGTGCCTGTGCCCATGGGCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCAGAGTGGCTTCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 72 bp GCTCGATGCAGCTGGATTTCAGCGGCGGCACGAGATTaGGGCATCCCAGGAGGGAGTGCTTGTCCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: ARCSWISAAARD*GIPGGSACPPP
Trigger: CGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCCAGCTGCATCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 72 bp CAAATGGACTCCGGACTGGGAGGCGCGGGATGGATCTaGCGCCGCTACTGTACGAGTTCTCGGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: QMDSGLGGAGWI*RRYCTSSRSSP
Trigger: GGGGCTGCTCCGAGAACTCGTACAGTAGCGGCGTCAGATCCATCCCGCGCCTCCCAGTCCGGAGTCCATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS GCA 72 bp GCTTGCCGCAGAGTGGGCACGGGTACTTGCGGTTCTTaGGGGCGTCGTCCTCGATGTCGCTCATCTGGGACA +
Preference number: 6 (lower is better)
Translates to: ACRRVGTGTCGS*GRRPRCRSSGT
Trigger: TGTCCCAGATGAGCGACATCGAGGACGACGCCCGCAAGAACCGCAAGTACCCGTGCCCACTCTGCGGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp GCTGGCTGCAGCCACTGCATGCACTGCGGCCGAAGGTaGCCAGTCTGTACCTCCACAGGGCCGGTTCAATCA +
Preference number: 6 (lower is better)
Translates to: AGCSHCMHCGRR*PVCTSTGPVQS
Trigger: TGATTGAACCGGCCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp CGCTCGATGCAGCTGGATTTCAGCGGCGGCACGAGATaGAGGCATCCCAGGAGGGAGTGCTTGTCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: RSMQLDFSGGTR*RHPRRECLSPS
Trigger: GGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCCAGCTGCATCGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp AAGCGGAAGCGCTTGCCGCAGAGTGGGCACGGGTACTTGCGGTTCTaGCGGGCGTCGTCCTCGATGTCGCTCATCTGGGACATGATGCCC +
Preference number: 6 (lower is better)
Translates to: KRKRLPQSGHGYLRF*RASSSMSLIWDMMP
Trigger: GGGCATCATGTCCCAGATGAGCGACATCGAGGACGACGCCCGCAAGAACCGCAAGTACCCGTGCCCACTCTGCGGCAAGCGCTTCCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp TGGCCCTTGCCGCCCTCTTCCGTGAGGTCTGCAGAGCTCCCCGCCTaGACAGCTGTAGGCTCCTCGAAATTCCCAGAAGCCTCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: WPLPPSSVRSAELPA*TAVGSSKFPEASES
Trigger: CGACTCAGAGGCTTCTGGGAATTTCGAGGAGCCTACAGCTGTCAAGGCGGGGAGCTCTGCAGACCTCACGGAAGAGGGCGGCAAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS TCA 72 bp TCTGGTGCAGCTTCTGACTCATGGCATACTGGCCGTTaGGGACGGGGCCACTCAGGTGGGGCTCAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: SGAASDSWHTGR*GRGHSGGAQLP
Trigger: CGGAAGCTGAGCCCCACCTGAGTGGCCCCGTCCTCAACGGCCAGTATGCCATGAGTCAGAAGCTGCACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp CTCAGGCCGGCTTTGTCCGGGGTCATGAAGCCACTCTaGAGGCAGGAGAGGTACCTGGAGTACAGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: LRPALSGVMKPL*RQERYLEYRLA
Trigger: CGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCAGAGTGGCTTCATGACCCCGGACAAAGCCGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TTCCATAACGAGGCTGGCTGCAGCCACTGCATGCACTaGGGCCGAAGGTGCCCAGTCTGTACCTCCACAGGG +
Preference number: 6 (lower is better)
Translates to: FHNEAGCSHCMH*GRRCPVCTSTG
Trigger: CCCTGTGGAGGTACAGACTGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CCA 72 bp TCAGAGCATCTGAGGGGACCTCCGAAGACATGCCCGTaGCCTGCCCCGAGTGATCTCCAGAGGAGAGAACCC +
Preference number: 6 (lower is better)
Translates to: SEHLRGPPKTCP*PAPSDLQRREP
Trigger: GGGTTCTCTCCTCTGGAGATCACTCGGGGCAGGCCACGGGCATGTCTTCGGAGGTCCCCTCAGATGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp CCCATGGGCACAGGCACCTCGGGGTCGCTGGGGGACTaGTTCTTCACCGACAGCTTGTTGAGGTGGACCTTC +
Preference number: 6 (lower is better)
Translates to: PMGTGTSGSLGD*FFTDSLLRWTF
Trigger: GAAGGTCCACCTCAACAAGCTGTCGGTGAAGAACAAGTCCCCCAGCGACCCCGAGGTGCCTGTGCCCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp CCGCCCTCTTCCGTGAGGTCTGCAGAGCTCCCCGCCTaGACAGCTGTAGGCTCCTCGAAATTCCCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: PPSSVRSAELPA*TAVGSSKFPEA
Trigger: GGCTTCTGGGAATTTCGAGGAGCCTACAGCTGTCAAGGCGGGGAGCTCTGCAGACCTCACGGAAGAGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS TCA 72 bp AGATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTTaGACTTGCCCTTGCAGAAGGTACAGCGGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: RCGCGGPAPRAS*TCPCRRYSGSP
Trigger: CGGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp GACATGATGCCCAGGTTCTGCCCGTTGAGGAACTGCTaGAAGTCCACCCTCCCGTTGAGGCTGGTGTCCACC +
Preference number: 6 (lower is better)
Translates to: DMMPRFCPLRNC*KSTLPLRLVST
Trigger: GGTGGACACCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp TGGGACATGATGCCCAGGTTCTGCCCGTTGAGGAACTaGTGCAAGTCCACCCTCCCGTTGAGGCTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: WDMMPRFCPLRN*CKSTLPLRLVS
Trigger: GGACACCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp GCTCCTCCTCCTGCGAAGCCGCGAAGTCGCACAACGTaGACTTGTAGGGCTTGTGCAAGATGCGGATGTGGC +
Preference number: 6 (lower is better)
Translates to: APPPAKPRSRTT*TCRACARCGCG
Trigger: GCCACATCCGCATCTTGCACAAGCCCTACAAGTGCACGTTGTGCGACTTCGCGGCTTCGCAGGAGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TTTGGGGGTTGCCCAGACAGCGGCCCAGCCCCGTTCTaGCGCTCCCGATGGTGTCGCTCTAAGTGGTATTTT +
Preference number: 6 (lower is better)
Translates to: FGGCPDSGPAPF*RSRWCRSKWYF
Trigger: AAAATACCACTTAGAGCGACACCATCGGGAGCGGCAGAACGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp GCCAAGGGGTCCTGGGCTTGGAGAAGACCCTGGCTGTaGCACTGCTTCTCCGGTGCTTGGGATAAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: AKGSWAWRRPWL*HCFSGAWDKGE
Trigger: CTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCTCCAAGCCCAGGACCCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp CGGTTCTTGCGGGCGTCGTCCTCGATGTCGCTCATCTaGGACATGATGCCCAGGTTCTGCCCGTTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: RFLRASSSMSLI*DMMPRFCPLRN
Trigger: GTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGACATCGAGGACGACGCCCGCAAGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CCA 72 bp TCCGGAAAGTTTTCCCACAGTACGGGCAGTCCTTCATaGCCGAGCCCAGGCTTCTGTCGCGAAGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: SGKFSHSTGSPS*PSPGFCREAAL
Trigger: CAGCGCTGCTTCGCGACAGAAGCCTGGGCTCGGCCATGAAGGACTGCCCGTACTGTGGGAAAACTTTCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp AGAAGACCCTGGCTGTGCCACTGCTTCTCCGGTGCTTaGGATAAAGGTGAGACCAGTCCCTGGACGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RRPWLCHCFSGA*DKGETSPWTGW
Trigger: CCAGCCCGTCCAGGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGGTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 72 bp CGAGGGCAGCAGGGCCATCTTACTCGCCTCCCGGGCTaGGTCTTTGCAGTTGACTGTGACCCCGATGGTGTT +
Preference number: 6 (lower is better)
Translates to: RGQQGHLTRLPG*VFAVDCDPDGV
Trigger: AACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCTGCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp TCCTCGATGTCGCTCATCTGGGACATGATGCCCAGGTTCTGCCCGTaGAGGAACTGCTGCAAGTCCACCCTCCCGTTGAGGCTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SSMSLIWDMMPRFCP*RNCCKSTLPLRLVS
Trigger: GGACACCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGACATCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS TCA 72 bp GCTTTTGGAAGGAAGGTCAGTGCCTTTCAGAGCATCTaGGGGGACCTCCGAAGACATGCCCGTGGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: AFGRKVSAFQSI*GDLRRHARGLP
Trigger: GGGCAGGCCACGGGCATGTCTTCGGAGGTCCCCTCAGATGCTCTGAAAGGCACTGACCTTCCTTCCAAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp TCGATGTCGCTCATCTGGGACATGATGCCCAGGTTCTaGCCGTTGAGGAACTGCTGCAAGTCCACCCTCCCG +
Preference number: 6 (lower is better)
Translates to: SMSLIWDMMPRF*PLRNCCKSTLP
Trigger: CGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGACATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS GCA 72 bp ACCCACTGGGCAATTCTTTTCCATAACGAGGCTGGCTaGAGCCACTGCATGCACTGCGGCCGAAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: THWAILFHNEAG*SHCMHCGRRCP
Trigger: TGGGCACCTTCGGCCGCAGTGCATGCAGTGGCTGCAGCCAGCCTCGTTATGGAAAAGAATTGCCCAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CCA 72 bp CCAGACAGCGGCCCAGCCCCGTTCTGCCGCTCCCGATaGTGTCGCTCTAAGTGGTATTTTAAGGATGCTGAC +
Preference number: 6 (lower is better)
Translates to: PDSGPAPFCRSR*CRSKWYFKDAD
Trigger: GTCAGCATCCTTAAAATACCACTTAGAGCGACACCATCGGGAGCGGCAGAACGGGGCTGGGCCGCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp GAGGGCAGCAGGGCCATCTTACTCGCCTCCCGGGCTTaGTCTTTGCAGTTGACTGTGACCCCGATGGTGTTA +
Preference number: 6 (lower is better)
Translates to: EGSRAILLASRA*SLQLTVTPMVL
Trigger: TAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp TCGACCCTGGAGCGCTTGAACCTGCGGTCGGGATACTaGCTGTTGTCAAAAGGCATGCGATGGACGCAGAGG +
Preference number: 6 (lower is better)
Translates to: STLERLNLRSGY*LLSKGMRWTQR
Trigger: CCTCTGCGTCCATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CAA 72 bp TCGCTCATCTGGGACATGATGCCCAGGTTCTGCCCGTaGAGGAACTGCTGCAAGTCCACCCTCCCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SLIWDMMPRFCP*RNCCKSTLPLR
Trigger: CCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGATGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355537.4
ENST00000585628.5
ENST00000591488.1
CDS CAA 72 bp AAGATGCGGATGTGGCGGTCCAGCTCCTCGCGCTTCTaGAACTTGCCCTTGCAGAAGGTACAGCGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: KMRMWRSSSSRF*NLPLQKVQRKP
Trigger: GGGCTTCCGCTGTACCTTCTGCAAGGGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp GAGTCGACCCTGGAGCGCTTGAACCTGCGGTCGGGATACTGGCTGTaGTCAAAAGGCATGCGATGGACGCAGAGGACATGGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: ESTLERLNLRSGYWL*SKGMRWTQRTWVFR
Trigger: CCTGAAGACCCATGTCCTCTGCGTCCATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CAA 90 bp GGCAGCAGGGCCATCTTACTCGCCTCCCGGGCTTGGTCTTTGCAGTaGACTGTGACCCCGATGGTGTTATCTTTGCGTTTCGCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: GSRAILLASRAWSLQ*TVTPMVLSLRFALP
Trigger: GGGCAAAGCGAAACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp GGCTCCTCGAAATTCCCAGAAGCCTCTGAGTCGACCCTGGAGCGCTaGAACCTGCGGTCGGGATACTGGCTGTTGTCAAAAGGCATGCGA +
Preference number: 6 (lower is better)
Translates to: GSSKFPEASESTLER*NLRSGYWLLSKGMR
Trigger: TCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAATTTCGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CCA 72 bp GCGGTAATGTCCACTTTCCTGGCGACCCTCCGTGCGTaGGTTTACTATTTCACCATCAAACCCGACCCCGGC +
Preference number: 6 (lower is better)
Translates to: AVMSTFLATLRA*VYYFTIKPDPG
Trigger: GCCGGGGTCGGGTTTGATGGTGAAATAGTAAACCCACGCACGGAGGGTCGCCAGGAAAGTGGACATTACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp CTGGAGCGCTTGAACCTGCGGTCGGGATACTGGCTGTaGTCAAAAGGCATGCGATGGACGCAGAGGACATGG +
Preference number: 6 (lower is better)
Translates to: LERLNLRSGYWL*SKGMRWTQRTW
Trigger: CCATGTCCTCTGCGTCCATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CAA 90 bp AACGAGGGCAGCAGGGCCATCTTACTCGCCTCCCGGGCTTGGTCTTaGCAGTTGACTGTGACCCCGATGGTGTTATCTTTGCGTTTCGCT +
Preference number: 6 (lower is better)
Translates to: NEGSRAILLASRAWS*QLTVTPMVLSLRFA
Trigger: AGCGAAACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCTGCCCTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 72 bp AGAGAAGCTTTGCTTGACATCTCATCCTTGTGGTCTTaGTTTGGGGGTTGCCCAGACAGCGGCCCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: REALLDISSLWS*FGGCPDSGPAP
Trigger: CGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAGACCACAAGGATGAGATGTCAAGCAAAGCTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CTCCCGCTTCTCCTTATCAAACAGAACCCCGGCGTTTaGCAAAGTGTCTTCGTGGTTGCGCTGCAGCGGATG +
Preference number: 6 (lower is better)
Translates to: LPLLLIKQNPGV*QSVFVVALQRM
Trigger: CATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGATAAGGAGAAGCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CACTCGGTGGGCTTCTCCTTCATGTTCCCAGGACCCTaGAGGTTATACTCGAGAGTCTGGTTCAGCCCGTGT +
Preference number: 6 (lower is better)
Translates to: HSVGFSFMFPGP*RLYSRVWFSPC
Trigger: ACACGGGCTGAACCAGACTCTCGAGTATAACCTGCAGGGTCCTGGGAACATGAAGGAGAAGCCCACCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp ACCTGCGGTCGGGATACTGGCTGTTGTCAAAAGGCATaGGATGGACGCAGAGGACATGGGTCTTCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: TCGRDTGCCQKA*DGRRGHGSSGS
Trigger: GGAACCTGAAGACCCATGTCCTCTGCGTCCATCGCATGCCTTTTGACAACAGCCAGTATCCCGACCGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS CAA 72 bp CCCAGAAAGGATAAAGTTGGTGCAGGCACTGACAGATaGCAAGAGGGGGCGTCCCCGTTCCTTGGCACTTGC +
Preference number: 6 (lower is better)
Translates to: PRKDKVGAGTDR*QEGASPFLGTC
Trigger: GCAAGTGCCAAGGAACGGGGACGCCCCCTCTTGCAATCTGTCAGTGCCTGCACCAACTTTATCCTTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591488.1
CDS CAA 72 bp CCCAGAAAGGATAAAGTTGGTGCAGGCACTGACAGATaGCAAGAGGGGGCGTCCCCGTTCCCAGGCAAGTCT +
Preference number: 6 (lower is better)
Translates to: PRKDKVGAGTDR*QEGASPFPGKS
Trigger: AGACTTGCCTGGGAACGGGGACGCCCCCTCTTGCAATCTGTCAGTGCCTGCACCAACTTTATCCTTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585628.5
CDS TCA 72 bp GCATCTGGCCGCACAGACAAGTCCAGGGGTTCATACTaGGATTTCTCGGACTTCCTCTGGGAGGACTTGCCA +
Preference number: 6 (lower is better)
Translates to: ASGRTDKSRGSY*DFSDFLWEDLP
Trigger: TGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTCAGTATGAACCCCTGGACTTGTCTGTGCGGCCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 72 bp AATTCCCAGAAGCCTCTGAGTCGACCCTGGAGCGCTTaGACCTGCGGTCGGGATACTGGCTGTTGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: NSQKPLSRPWSA*TCGRDTGCCQK
Trigger: CTTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS GCA 72 bp ACCCCGGCGTTTGCCAAAGTGTCTTCGTGGTTGCGCTaGAGCGGATGCTCTTTAGACAAGAAGCCATGTTCC +
Preference number: 6 (lower is better)
Translates to: TPAFAKVSSWLR*SGCSLDKKPCS
Trigger: GGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS GCA 72 bp CCAGAAAGGATAAAGTTGGTGCAGGCACTGACAGATTaGAAGAGGGGGCGTCCCCGTTCCTTGGCACTTGCT +
Preference number: 6 (lower is better)
Translates to: PERIKLVQALTD*KRGRPRSLALA
Trigger: AGCAAGTGCCAAGGAACGGGGACGCCCCCTCTTGCAATCTGTCAGTGCCTGCACCAACTTTATCCTTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591488.1
CDS GCA 72 bp CCAGAAAGGATAAAGTTGGTGCAGGCACTGACAGATTaGAAGAGGGGGCGTCCCCGTTCCCAGGCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: PERIKLVQALTD*KRGRPRSQASL
Trigger: AAGACTTGCCTGGGAACGGGGACGCCCCCTCTTGCAATCTGTCAGTGCCTGCACCAACTTTATCCTTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585628.5
CDS CCA 72 bp GAGATTTCTCGGACTTCCTCTGGGAGGACTTGCCACTaGGTTTCTCCTCACCACCATCCACTCCGTGGACTT +
Preference number: 6 (lower is better)
Translates to: EISRTSSGRTCH*VSPHHHPLRGL
Trigger: AAGTCCACGGAGTGGATGGTGGTGAGGAGAAACCCAGTGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp AAGTCTGATGGGAAGTTACAAAATGCAGGGTCCACGTaGCCGGTCCATGCACCGCTCTTCTGCTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: KSDGKLQNAGST*PVHAPLFCSPR
Trigger: TCTGGGAGAGCAGAAGAGCGGTGCATGGACCGGCCACGTGGACCCTGCATTTTGTAACTTCCCATCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 72 bp ACTCCCGCTTCTCCTTATCAAACAGAACCCCGGCGTTaGCCAAAGTGTCTTCGTGGTTGCGCTGCAGCGGAT +
Preference number: 6 (lower is better)
Translates to: TPASPYQTEPRR*PKCLRGCAAAD
Trigger: ATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGATAAGGAGAAGCGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp AAGCTTTGCTTGACATCTCATCCTTGTGGTCTTGATTaGGGGGTTGCCCAGACAGCGGCCCAGCCCCGTTCT +
Preference number: 6 (lower is better)
Translates to: KLCLTSHPCGLD*GVAQTAAQPRS
Trigger: AGAACGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAGACCACAAGGATGAGATGTCAAGCAAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp AGCAGGGCCATCTTACTCGCCTCCCGGGCTTGGTCTTaGCAGTTGACTGTGACCCCGATGGTGTTATCTTTG +
Preference number: 6 (lower is better)
Translates to: SRAILLASRAWS*QLTVTPMVLSL
Trigger: CAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp TCCCCGCCATCGCTGCTGCTGTCTTTGCTGAGGGCAGACAGTGGCTaGGTCATCATTTCCGGTTCGGTTTCAACATCCTCTTCATCGTTG +
Preference number: 6 (lower is better)
Translates to: SPPSLLLSLLRADSG*VIISGSVSTSSSSL
Trigger: CAACGATGAAGAGGATGTTGAAACCGAACCGGAAATGATGACCAAGCCACTGTCTGCCCTCAGCAAAGACAGCAGCAGCGATGGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 72 bp CATACTGAGATTTCTCGGACTTCCTCTGGGAGGACTTaGCACTGGGTTTCTCCTCACCACCATCCACTCCGT +
Preference number: 6 (lower is better)
Translates to: HTEISRTSSGRT*HWVSPHHHPLR
Trigger: ACGGAGTGGATGGTGGTGAGGAGAAACCCAGTGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 72 bp AACAGAACCCCGGCGTTTGCCAAAGTGTCTTCGTGGTaGCGCTGCAGCGGATGCTCTTTAGACAAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: NRTPAFAKVSSW*RCSGCSLDKKP
Trigger: TGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp GCCATCTTACTCGCCTCCCGGGCTTGGTCTTTGCAGTaGACTGTGACCCCGATGGTGTTATCTTTGCGTTTC +
Preference number: 6 (lower is better)
Translates to: AILLASRAWSLQ*TVTPMVLSLRF
Trigger: GAAACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 72 bp AAATTCCCAGAAGCCTCTGAGTCGACCCTGGAGCGCTaGAACCTGCGGTCGGGATACTGGCTGTTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: KFPEASESTLER*NLRSGYWLLSK
Trigger: TTTTGACAACAGCCAGTATCCCGACCGCAGGTTCAAGCGCTCCAGGGTCGACTCAGAGGCTTCTGGGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592773.2
CDS TCA 72 bp CTTGGCAGGTCTCTCTGGCTGCCCACTTTAGTGCTGTaGACCAAATCAGCAGGCATTTTCTGCTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: LGRSLWLPTLVL*TKSAGIFCLEP
Trigger: TGGCTCCAAGCAGAAAATGCCTGCTGATTTGGTTCACAGCACTAAAGTGGGCAGCCAGAGAGACCTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp TCAAACAGAACCCCGGCGTTTGCCAAAGTGTCTTCGTaGTTGCGCTGCAGCGGATGCTCTTTAGACAAGAAG +
Preference number: 6 (lower is better)
Translates to: SNRTPAFAKVSS*LRCSGCSLDKK
Trigger: CTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CGGTTTCAACATCCTCTTCATCGTTGTTCTCCCCCTTaGAGGAGTCCATGTCCTCTGAGGAGGCAATGTCAG +
Preference number: 6 (lower is better)
Translates to: RFQHPLHRCSPP*RSPCPLRRQCQ
Trigger: CTGACATTGCCTCCTCAGAGGACATGGACTCCTCCAAGGGGGAGAACAACGATGAAGAGGATGTTGAAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp CCTACTGCCCTTCCACCTCCACTGCAGCTGCTTTCCTaGACACTGTCAGTCTGGAAGGTAGCATCAAATACT +
Preference number: 6 (lower is better)
Translates to: PTALPPPLQLLS*TLSVWKVASNT
Trigger: AGTATTTGATGCTACCTTCCAGACTGACAGTGTCCAGGAAAGCAGCTGCAGTGGAGGTGGAAGGGCAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp TCTTTGCAGTTGACTGTGACCCCGATGGTGTTATCTTaGCGTTTCGCTTTGCCCAGGTGGTTGGCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SLQLTVTPMVLS*RFALPRWLAWR
Trigger: TCTCCAGGCCAACCACCTGGGCAAAGCGAAACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 72 bp TCGCTGCTGCTGTCTTTGCTGAGGGCAGACAGTGGCTaGGTCATCATTTCCGGTTCGGTTTCAACATCCTCT +
Preference number: 6 (lower is better)
Translates to: SLLLSLLRADSG*VIISGSVSTSS
Trigger: AGAGGATGTTGAAACCGAACCGGAAATGATGACCAAGCCACTGTCTGCCCTCAGCAAAGACAGCAGCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp GAAGCAGAGTCTAGAGAGCTGATCATATTGGAGAGGCCCAGGTCTTaGTTTGATTGTAACGAGGGCAGCAGGGCCATCTTACTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: EAESRELIILERPRS*FDCNEGSRAILLAS
Trigger: GGAGGCGAGTAAGATGGCCCTGCTGCCCTCGTTACAATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGACTCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp GGCTTGGTCATCATTTCCGGTTCGGTTTCAACATCCTCTTCATCGTaGTTCTCCCCCTTGGAGGAGTCCATGTCCTCTGAGGAGGCAATG +
Preference number: 6 (lower is better)
Translates to: GLVIISGSVSTSSSS*FSPLEESMSSEEAM
Trigger: CATTGCCTCCTCAGAGGACATGGACTCCTCCAAGGGGGAGAACAACGATGAAGAGGATGTTGAAACCGAACCGGAAATGATGACCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp TCCTTATCAAACAGAACCCCGGCGTTTGCCAAAGTGTCTTCGTGGTaGCGCTGCAGCGGATGCTCTTTAGACAAGAAGCCATGTTCCATG +
Preference number: 6 (lower is better)
Translates to: SLSNRTPAFAKVSSW*RCSGCSLDKKPCSM
Trigger: CATGGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp CCTTGGGCCATCTTCTCAGAAGCAGAGTCTAGAGAGCTGATCATATaGGAGAGGCCCAGGTCTTTGTTTGATTGTAACGAGGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PWAIFSEAESRELII*ERPRSLFDCNEGSR
Trigger: CCTGCTGCCCTCGTTACAATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGACTCTGCTTCTGAGAAGATGGCCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 72 bp ATCGTTGTTCTCCCCCTTGGAGGAGTCCATGTCCTCTaGGGAGGCAATGTCAGAGAGGTCATCAGTAGTGTT +
Preference number: 6 (lower is better)
Translates to: IVVLPLGGVHVL*GGNVREVISSV
Trigger: AACACTACTGATGACCTCTCTGACATTGCCTCCTCAGAGGACATGGACTCCTCCAAGGGGGAGAACAACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 72 bp TTTGCCAAAGTGTCTTCGTGGTTGCGCTGCAGCGGATaGTCTTTAGACAAGAAGCCATGTTCCATGGCCATG +
Preference number: 6 (lower is better)
Translates to: FAKVSSWLRCSG*SLDKKPCSMAM
Trigger: CATGGCCATGGAACATGGCTTCTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CCA 72 bp CCTCCACTGCAGCTGCTTTCCTGGACACTGTCAGTCTaGAAGGTAGCATCAAATACTCATCTCAGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: PPLQLLSWTLSV*KVASNTHLRQV
Trigger: GACTTGCCTGAGATGAGTATTTGATGCTACCTTCCAGACTGACAGTGTCCAGGAAAGCAGCTGCAGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS TCA 72 bp CATGCCTGGGTAAACACCAAACTGCTTGTAGAAGTCTaGTGGGAAGTTACAAAATGCAGGGTCCACGTGGCC +
Preference number: 6 (lower is better)
Translates to: HAWVNTKLLVEV*WEVTKCRVHVA
Trigger: GGCCACGTGGACCCTGCATTTTGTAACTTCCCATCAGACTTCTACAAGCAGTTTGGTGTTTACCCAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CCA 72 bp GATAAGCTCTTCCGATCTCAGAGAAGTGGGTGCTTTTaGAAGGAAGGTCAGTGCCTTTCAGAGCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: DKLFRSQRSGCF*KEGQCLSEHLR
Trigger: CCTCAGATGCTCTGAAAGGCACTGACCTTCCTTCCAAAAGCACCCACTTCTCTGAGATCGGAAGAGCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp ATCATTTCCGGTTCGGTTTCAACATCCTCTTCATCGTaGTTCTCCCCCTTGGAGGAGTCCATGTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: IISGSVSTSSSS*FSPLEESMSSE
Trigger: CTCAGAGGACATGGACTCCTCCAAGGGGGAGAACAACGATGAAGAGGATGTTGAAACCGAACCGGAAATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS TCA 72 bp TTAAAGCCGTGGTGGTCAGGAATTGGCACTTGCTTTTaGGTGTGCAGATCGTCGCGGTTTTCACTTGGGTTT +
Preference number: 6 (lower is better)
Translates to: LKPWWSGIGTCF*VCRSSRFSLGF
Trigger: AAACCCAAGTGAAAACCGCGACGATCTGCACACTCAAAAGCAAGTGCCAATTCCTGACCACCACGGCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585628.5
ENST00000590564.5
CDS GCA 72 bp GCAAGGACCCTTGGAAATTCACACCGTTGCTCACAATaGTTTGATAAGCTCTTCCGATCTCAGAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: ARTLGNSHRCSQ*FDKLFRSQRSG
Trigger: CCCACTTCTCTGAGATCGGAAGAGCTTATCAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp GGACCCTTGGAAATTCACACCGTTGCTCACAATGCTTaGATAAGCTCTTCCGATCTCAGAGAAGTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: GPLEIHTVAHNA*ISSSDLREVGA
Trigger: AGCACCCACTTCTCTGAGATCGGAAGAGCTTATCAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp TCTAGAGAGCTGATCATATTGGAGAGGCCCAGGTCTTaGTTTGATTGTAACGAGGGCAGCAGGGCCATCTTA +
Preference number: 6 (lower is better)
Translates to: SRELIILERPRS*FDCNEGSRAIL
Trigger: TAAGATGGCCCTGCTGCCCTCGTTACAATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS CAA 90 bp AGCTTGCAAGGACCCTTGGAAATTCACACCGTTGCTCACAATGCTTaGATAAGCTCTTCCGATCTCAGAGAAGTGGGTGCTTTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: SLQGPLEIHTVAHNA*ISSSDLREVGAFGR
Trigger: CCTTCCAAAAGCACCCACTTCTCTGAGATCGGAAGAGCTTATCAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp TCCAGTCGGCAATATTCCTTTCAGCCTCATGATTCTAGTGTGCTGTaGCCCATTCCCTCAACCCACTGGGCAATTCTTTTCCATAACGAG +
Preference number: 6 (lower is better)
Translates to: SSRQYSFQPHDSSVL*PIPSTHWAILFHNE
Trigger: CTCGTTATGGAAAAGAATTGCCCAGTGGGTTGAGGGAATGGGCAACAGCACACTAGAATCATGAGGCTGAAAGGAATATTGCCGACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS TCA 72 bp CTTGGGCCATCTTCTCAGAAGCAGAGTCTAGAGAGCTaGTCATATTGGAGAGGCCCAGGTCTTTGTTTGATT +
Preference number: 6 (lower is better)
Translates to: LGPSSQKQSLES*SYWRGPGLCLI
Trigger: AATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGACTCTGCTTCTGAGAAGATGGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4
CDS GCA 72 bp ACTGACTGCAATGTGCAGTTTATAGTGGCAAACTATTaGCCCTCAGTTGGGAAAAATGACCTCCAGTCGGCA +
Preference number: 6 (lower is better)
Translates to: TDCNVQFIVANY*PSVGKNDLQSA
Trigger: TGCCGACTGGAGGTCATTTTTCCCAACTGAGGGGCAATAGTTTGCCACTATAAACTGCACATTGCAGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp CTTCAAGGAACTGAGGACAAAACTGTCCATGAAAGCTaGCAAGGACCCTTGGAAATTCACACCGTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: LQGTEDKTVHES*QGPLEIHTVAH
Trigger: GTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGTTTTGTCCTCAGTTCCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp CAAGGAACTGAGGACAAAACTGTCCATGAAAGCTTGCAAGGACCCTaGGAAATTCACACCGTTGCTCACAATGCTTTGATAAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QGTEDKTVHESLQGP*EIHTVAHNALISSS
Trigger: GGAAGAGCTTATCAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGTTTTGTCCTCAGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 90 bp CTTCTCCTTCTTCAAGGAACTGAGGACAAAACTGTCCATGAAAGCTaGCAAGGACCCTTGGAAATTCACACCGTTGCTCACAATGCTTTG +
Preference number: 6 (lower is better)
Translates to: LLLLQGTEDKTVHES*QGPLEIHTVAHNAL
Trigger: CAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGTTTTGTCCTCAGTTCCTTGAAGAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS TCA 72 bp TATAGTGGCAAACTATTGCCCCTCAGTTGGGAAAAATaGCCTCCAGTCGGCAATATTCCTTTCAGCCTCATG +
Preference number: 6 (lower is better)
Translates to: YSGKLLPLSWEK*PPVGNIPFSLM
Trigger: CATGAGGCTGAAAGGAATATTGCCGACTGGAGGTCATTTTTCCCAACTGAGGGGCAATAGTTTGCCACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS GCA 72 bp AATATTCCTTTCAGCCTCATGATTCTAGTGTGCTGTTaGCCATTCCCTCAACCCACTGGGCAATTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: NIPFSLMILVCC*PFPQPTGQFFS
Trigger: GGAAAAGAATTGCCCAGTGGGTTGAGGGAATGGGCAACAGCACACTAGAATCATGAGGCTGAAAGGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590564.5
CDS CAA 72 bp GAGGACAAAACTGTCCATGAAAGCTTGCAAGGACCCTaGGAAATTCACACCGTTGCTCACAATGCTTTGATA +
Preference number: 6 (lower is better)
Translates to: EDKTVHESLQGP*EIHTVAHNALI
Trigger: TATCAAAGCATTGTGAGCAACGGTGTGAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGTTTTGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355537.4
ENST00000585628.5
CDS CAA 72 bp ATCTTCTCAGAAGCAGAGTCTAGAGAGCTGATCATATaGGAGAGGCCCAGGTCTTTGTTTGATTGTAACGAG +
Preference number: 6 (lower is better)
Translates to: IFSEAESRELII*ERPRSLFDCNE
Trigger: CTCGTTACAATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGACTCTGCTTCTGAGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355537.4