Pregenerated sensors for ZNF534 (Homo sapiens)
Ensembl gene IDs: ENSG00000198633Ensembl transcript IDs: ENST00000301085.8, ENST00000432303.6, ENST00000433050.6, ENST00000617900.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGGCGGGCTGGGCCCGCTaGCTGGGTGAAACGGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: TGTVQIVARVPGEPGNAEAGWAR*LGETAG Trigger: ACCCGCCGTTTCACCCAGCCAGCGGGCCCAGCCCGC...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGCCCTCCTCCGCGGGCTaGGCCCGCTGGCTGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TGTVQIVARVPGEPGNAEPSSAG*ARWLGE Trigger: TTCACCCAGCCAGCGGGCCCAGCCCGCGGAGGAGGG...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| CDS-3UTR GCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGTTCCGCGCAGTCGGGTaGCGGGTCTACAGGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TGTVQIVARVPGEPGNAEFRAVG*RVYRKK Trigger: CTTTTTCCTGTAGACCCGGCACCCGACTGCGCGGAA...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301085.8 |
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| CDS-3UTR TCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGGGCCACATCGCTGAATaGCAATTGCCCCTGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTVQIVARVPGEPGNAEGHIAE*QLPLSK Trigger: CTTACTCAGGGGCAATTGTCATTCAGCGATGTGGCC...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| CDS-3UTR CCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGATTTCCCACAAAGTTTaGGCCGGTTGGCTCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGTVQIVARVPGEPGNAEISHKV*AGWLLS Trigger: GCTGAGGAGCCAACCGGCCCAAACTTTGTGGGAAAT...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| CDS-3UTR TCA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGGTCCCAGGCCAGAAGTaGAAAATCTGTGTTCACACC | + |
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Preference number: 4 (lower is better) Translates to: TGTVQIVARVPGEPGNAEVPGQK*KICVHT Trigger: GGTGTGAACACAGATTTTTCACTTCTGGCCTGGGAC...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301085.8 ENST00000617900.1 |
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| CDS-3UTR CAA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGCAAAGTTTGGGCCGGTaGGCTCCTCAGCACCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: TGTVQIVARVPGEPGNAEQSLGR*APQHLR Trigger: CCGGAGGTGCTGAGGAGCCAACCGGCCCAAACTTTG...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| CDS-3UTR CAA 90 bp | ACAGGCACTGTACAGATCGTAGCCCGCGTGCCCGGAGAGCCAGGCAACGCGGAGCATTTCCCACAAAGTTaGGGCCGGTTGGCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGTVQIVARVPGEPGNAEHFPQS*GRLAPQ Trigger: CTGAGGAGCCAACCGGCCCAAACTTTGTGGGAAATG...CTCCGCGTTGCCTGGCTCTCCGGGCACGCGGGCTACGATCTGTACAGTGCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301085.8 ENST00000432303.6 ENST00000617900.1 |
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| CDS GCA 90 bp | AGCATTCCTTATGGGAAACAAAGGGATGGGCTCTGGTTAGTTATCTaGAGCATGAACATGTCCTTAAGGCACAGAATGCACATGCTATTA | + |
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Preference number: 5 (lower is better) Translates to: SIPYGKQRDGLWLVI*SMNMSLRHRMHMLL Trigger: TAATAGCATGTGCATTCTGTGCCTTAAGGACATGTTCATGCTGCAGATAACTAACCAGAGCCCATCCCTTTGTTTCCCATAAGGAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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| CDS CCA 90 bp | AGATTACATAAAAGCATTCCTTATGGGAAACAAAGGGATGGGCTCTaGTTAGTTATCTGCAGCATGAACATGTCCTTAAGGCACAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: RLHKSIPYGKQRDGL*LVICSMNMSLRHRM Trigger: CATTCTGTGCCTTAAGGACATGTTCATGCTGCAGATAACTAACCAGAGCCCATCCCTTTGTTTCCCATAAGGAATGCTTTTATGTAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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| CDS GCA 72 bp | GAGTGGCGGCTTAGACAGTCTTTCCGCGCAGTCGGGTaGCGGGTCTACAGGAAAAAGCGCGCGAAACGTTCA | + |
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Preference number: 6 (lower is better) Translates to: EWRLRQSFRAVG*RVYRKKRAKRS Trigger: TGAACGTTTCGCGCGCTTTTTCCTGTAGACCCGGCACCCGACTGCGCGGAAAGACTGTCTAAGCCGCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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| CDS GCA 72 bp | AGCGGTTTTTCTGCCCTGGGTGGGCCAGGTGTTCTTTaGCATCATTCTGGTAAACCAACGACCTTCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SGFSALGGPGVL*HHSGKPTTFSM Trigger: CATGCTGAAGGTCGTTGGTTTACCAGAATGATGGCAAAGAACACCTGGCCCACCCAGGGCAGAAAAACCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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| CDS GCA 72 bp | TTATTTGTGGTTCTGGAACGCCTTAAGCGGTTTTTCTaGCCTGGGTGGGCCAGGTGTTCTTTGCCATCATTC | + |
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Preference number: 6 (lower is better) Translates to: LFVVLERLKRFF*PGWARCSLPSF Trigger: GAATGATGGCAAAGAACACCTGGCCCACCCAGGGCAGAAAAACCGCTTAAGGCGTTCCAGAACCACAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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| CDS CCA 72 bp | AAAAGCATTCCTTATGGGAAACAAAGGGATGGGCTCTaGTTAGTTATCTGCAGCATGAACATGTCCTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KSIPYGKQRDGL*LVICSMNMSLR Trigger: CCTTAAGGACATGTTCATGCTGCAGATAACTAACCAGAGCCCATCCCTTTGTTTCCCATAAGGAATGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433050.6 |
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