Pregenerated sensors for ZNF530 (Homo sapiens)
Ensembl gene IDs: ENSG00000183647Ensembl transcript IDs: ENST00000332854.10, ENST00000332854.11, ENST00000597700.6, ENST00000598297.1, ENST00000600619.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGGCAATCCTCTGGAAGCTGCCAGCAGAACTCAGATCAGGTCCTaGGGCCAACACTGGGGTAGTTATATGCACTATGTAGCCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: KGNPLEAASRTQIRS*GQHWGSYMHYVATG Trigger: TCCTGTGGCTACATAGTGCATATAACTACCCCAGTGTTGGCCCCAGGACCTGATCTGAGTTCTGCTGGCAGCTTCCAGAGGATTGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332854.10 |
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| 3UTR CCA 90 bp | CTGGAAGCTGCCAGCAGAACTCAGATCAGGTCCTGGGGCCAACACTaGGGTAGTTATATGCACTATGTAGCCACAGGAGGAAATGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LEAASRTQIRSWGQH*GSYMHYVATGGNEK Trigger: TTTCTCATTTCCTCCTGTGGCTACATAGTGCATATAACTACCCCAGTGTTGGCCCCAGGACCTGATCTGAGTTCTGCTGGCAGCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332854.10 |
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| 3UTR-3UTR GCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATCTGAGATTGCACAATTaGACTCCAGCCTGGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: HESHQRRLFSKASLQCRHLRLHN*TPAWVT Trigger: CGTCACCCAGGCTGGAGTGCAATTGTGCAATCTCAG...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAAGGCGGAGGTTGCAGTaGGCTGAGATTGCACAATTG | + |
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Preference number: 2 (lower is better) Translates to: QRRLFSKASLQCRHTKLKRRRLQ*AEIAQL Trigger: CAATTGTGCAATCTCAGCTCACTGCAACCTCCGCCT...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR CCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATAATTGCACTCCAGCCTaGGTGACGAGCAAAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: HESHQRRLFSKASLQCRHNCTPA*VTSKIP Trigger: TGGAATTTTGCTCGTCACCCAGGCTGGAGTGCAATT...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR GCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCCTGAGATTGCACAATTaGACTCCAGCCTGGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: WMFGYMSHIREGSSQRLALRLHN*TPAWVT Trigger: CGTCACCCAGGCTGGAGTGCAATTGTGCAATCTCAG...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAAATTGCACTCCAGCCTaGGTGACGAGCAAAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: QRRLFSKASLQCRHTKLKNCTPA*VTSKIP Trigger: TGGAATTTTGCTCGTCACCCAGGCTGGAGTGCAATT...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGAGGCGGAGGTTGCAGTaGGCTGAGATTGCACAATTG | + |
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Preference number: 2 (lower is better) Translates to: FSKASLQCRHTKLKQTNKRRRLQ*AEIAQL Trigger: CAATTGTGCAATCTCAGCTCACTGCAACCTCCGCCT...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGAGCAGGTGGATTACCTaGGGTCAGGAGTTCAACACC | + |
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Preference number: 2 (lower is better) Translates to: FSKASLQCRHTKLKQTNKSRWIT*GQEFNT Trigger: GGTGTTGAACTCCTGACCTCAGGTAATCCACCTGCT...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332854.10 ENST00000600619.1 |
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| 3UTR-3UTR TCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTAAGCAGGTGGATTACCTaGGGTCAGGAGTTCAACACC | + |
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Preference number: 2 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLSRWIT*GQEFNT Trigger: GGTGTTGAACTCCTGACCTCAGGTAATCCACCTGCT...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| 3UTR CCA 72 bp | CCTCTGGAAGCTGCCAGCAGAACTCAGATCAGGTCCTaGGGCCAACACTGGGGTAGTTATATGCACTATGTA | + |
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Preference number: 3 (lower is better) Translates to: PLEAASRTQIRS*GQHWGSYMHYV Trigger: TACATAGTGCATATAACTACCCCAGTGTTGGCCCCAGGACCTGATCTGAGTTCTGCTGGCAGCTTCCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332854.10 |
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| CDS-3UTR CCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATGCGGGCCGGGAGCGGTaGACGATCCGGGCGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHAGRER*TIRAET Trigger: TGTCTCCGCCCGGATCGTCCACCGCTCCCGGCCCGC...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGGGTCGGGGCCCTCAGTaGCGCCGCCATCGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKGRGPQ*RRHRTL Trigger: CAGAGTCCGATGGCGGCGGCACTGAGGGCCCCGACC...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCCCCCGGCTGTGCAGCTaGGAAAACGACTCTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAPRLCS*ENDSPR Trigger: GCGAGGAGAGTCGTTTTCTCAGCTGCACAGCCGGGG...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATTGGAGTCCTGCCCTGTaGCAGTTCTTCCACAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHWSPAL*QFFHRN Trigger: GTTTCTGTGGAAGAACTGTCACAGGGCAGGACTCCA...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATGCAGTTCATCATAAATaGGGCCTGGTCCCCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHAVHHK*GLVPIH Trigger: GTGGATGGGGACCAGGCCTCATTTATGATGAACTGC...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATAGCAGGTGGATTACCTaGGGTCAGGAGTTCAACACC | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHSRWIT*GQEFNT Trigger: GGTGTTGAACTCCTGACCTCAGGTAATCCACCTGCT...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATAGCTTCTGGAGCTGGTaGAGGTTTGAACTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHSFWSW*RFELIQ Trigger: CTGGATGAGTTCAAACCTTCACCAGCTCCAGAAGCT...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAATGGTGGGAGTCACCTaGTGCTGGAGAAGTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QRRLFSKASLQCRHTKLKMVGVT*CWRSPE Trigger: CTCAGGACTTCTCCAGCATCAGGTGACTCCCACCAT...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAGGAGAAGTCCTGAGGTaGCTGAAAAGTCCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: QRRLFSKASLQCRHTKLKGEVLR*LKSPSR Trigger: TCGGGAGGGACTTTTCAGCCACCTCAGGACTTCTCC...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGACCCGCGGATGGAACTaGCACAAGCCAAAGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKTRGWN*HKPKCP Trigger: CGGGCACTTTGGCTTGTGTCAGTTCCATCCGCGGGT...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACGTGAAGGGTTTTCCTaGCACATGGAACCTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QRRLFSKASLQCRHTKLKREGFS*HMEPAV Trigger: AACTGCAGGTTCCATGTGTCAGGAAAACCCTTCACG...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATGGCTTTGTTTTAGTGTaGGCTCTTCTGTGTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHGFVLV*ALLCRK Trigger: CTTTCGACACAGAAGAGCTCACACTAAAACAAAGCC...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAACGATCATAGCTTGCTaGAGCCTCAAACTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QRRLFSKASLQCRHTKLKTIIAC*SLKLLG Trigger: GCCCAAGAGTTTGAGGCTGCAGCAAGCTATGATCGT...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAGGCACGATCATAGCTTaGTGCAGCCTCAAACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QRRLFSKASLQCRHTKLKGTIIA*CSLKLL Trigger: CAAGAGTTTGAGGCTGCAGCAAGCTATGATCGTGCC...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATATCATAAATGAGGCCTaGTCCCCATCCACTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHIINEA*SPSTLK Trigger: CTTTAAAGTGGATGGGGACCAGGCCTCATTTATGAT...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTGTGTGGTCTCTCAATaGTGGGAGTCACCTGATGCT | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLACVVSQ*WESPDA Trigger: AGCATCAGGTGACTCCCACCATTGAGAGACCACACA...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTGGATTCAGTGTATTTaGGAGGCTTTCGTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAWIQCI*EAFVQW Trigger: CCACTGGACGAAAGCCTCTCAAATACACTGAATCCA...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCCTCGTTGATGTTGAATaGGGACAGATACCTGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLALVDVE*GQIPGE Trigger: TTCGCCAGGTATCTGTCCTCATTCAACATCAACGAG...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCAGATGTGAGCCACCATaGCAGGCCTCTTTTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLARCEPP*QASFHS Trigger: AGAATGAAAAGAGGCCTGGCATGGTGGCTCACATCT...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGGTGGTCTCTCAATGGTaGGAGTCACCTGATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKVVSQW*ESPDAG Trigger: TCCAGCATCAGGTGACTCCCACCATTGAGAGACCAC...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | CATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATTGGTGTCGAATGAGGTaGGTTTTTCGGATAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HESHQRRLFSKASLQCRHWCRMR*VFRIKD Trigger: ATCTTTTATCCGAAAAACCCACCTCATTCGACACCA...ATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCCAAATCTCACAGGGGTaGCTCTTATCAGTGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAQISQG*LLSVDV Trigger: TACATCCACTGATAAGAGTCACCCCTGTGAGATTTG...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGTTTCTGTCCACAGGGTaGGGCATGGAGCTCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKFLSTG*GMELNH Trigger: ATGATTGAGCTCCATGCCTCACCCTGTGGACAGAAA...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGCGACTTCCCCAAACGTaGAGGGTTTTCCTGACACAT | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKRLPQT*RVFLTH Trigger: ATGTGTCAGGAAAACCCTTCACGTTTGGGGAAGTCG...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCGGATGTTTGGATACATaGGTCACATCAGAGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAGCLDT*VTSEKA Trigger: AGCCTTCTCTGATGTGACTCATGTATCCAAACATCC...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCCCTTGTTCTACCGTGTaGTTTCCTGTGTCGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAPCSTV*FPVSKK Trigger: TTTCTTCGACACAGGAAAGCACACGGTAGAACAAGG...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTAGCTACAAAAACCTGCTaGGTCGGGGCCCTCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLATKTC*VGALSA Trigger: GGCACTGAGGGCCCCGACCCAGCAGGTTTTTGTAGC...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCGGTTTTCCTGACACATaGAACCTGCAGTTCATCATA | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAGFPDT*NLQFII Trigger: TATGATGAACTGCAGGTTCCATGTGTCAGGAAAACC...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTACACAGAAACGCTCTCTaGAGAAGGCGTCCCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLHRNAL*RRRPLI Trigger: GATGAGGGGACGCCTTCTGCAGAGAGCGTTTCTGTG...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGGGTGACTCTTATCAGTaGATGTATCTGCCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKGDSYQ*MYLPLE Trigger: CTCCAAAGGCAGATACATCCACTGATAAGAGTCACC...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGAGCCTCCCAAAAAGTTaGGATTACAGATGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKSLPKS*DYRCEP Trigger: TGGCTCACATCTGTAATCCCAACTTTTTGGGAGGCT...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTTTATGGGAAATCCATaGATGTTTGGATACATGAGT | + |
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Preference number: 4 (lower is better) Translates to: WMFGYMSHIREGSSQRLAFMGNP*MFGYMS Trigger: ACTCATGTATCCAAACATCCATGGATTTCCCATAAA...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTAAATTGCACTCCAGCCTaGGTGACGAGCAAAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLNCTPA*VTSKIP Trigger: TGGAATTTTGCTCGTCACCCAGGCTGGAGTGCAATT...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CCA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGAAATCCATGGATGTTTaGATACATGAGTCACATCAG | + |
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Preference number: 4 (lower is better) Translates to: FSKASLQCRHTKLKQTNKKSMDV*IHESHQ Trigger: CTGATGTGACTCATGTATCCAAACATCCATGGATTT...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTACATCCAGAAATCTCTTaGTGCTCCACCCAAGTACAA | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLHPEIS*CSTQVQ Trigger: TTGTACTTGGGTGGAGCATCAAGAGATTTCTGGATG...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR GCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTAAAGGCTAGCCTCCAGTaGCGTCATACCAAGTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLKASLQ*RHTKLK Trigger: TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTT...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR TCA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTACACATTCACTGCACATaGACTCTTCTGTGTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLHIHCT*TLLCLK Trigger: CTTAAGACACAGAAGAGTTCATGTGCAGTGAATGTG...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS GCA 90 bp | AGTTGCCACAACTGCCCCCTCTGCAGAATGACCTCTGAGCCCACATaGAGGCAAAAATCAGAGCCAGAAAGCCCTGCAGTGTCTCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: SCHNCPLCRMTSEPT*RQKSEPESPAVSPR Trigger: TCTAGGAGACACTGCAGGGCTTTCTGGCTCTGATTTTTGCCTGCATGTGGGCTCAGAGGTCATTCTGCAGAGGGGGCAGTTGTGGCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS GCA 90 bp | CTCAGCTCACTGCAACCTCCACTTCCGGGTTCAAGCTATTCTTGGTaGGTCAGCCTTCAGAGCAGCTGGGATTATAGACGTGCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: LSSLQPPLPGSSYSW*VSLQSSWDYRRAPL Trigger: CAGTGGTGCACGTCTATAATCCCAGCTGCTCTGAAGGCTGACGCACCAAGAATAGCTTGAACCCGGAAGTGGAGGTTGCAGTGAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS CCA 90 bp | GGTCTCAGCTCACTGCAACCTCCACTTCCGGGTTCAAGCTATTCTTaGTGCGTCAGCCTTCAGAGCAGCTGGGATTATAGACGTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: GLSSLQPPLPGSSYS*CVSLQSSWDYRRAP Trigger: TGGTGCACGTCTATAATCCCAGCTGCTCTGAAGGCTGACGCACCAAGAATAGCTTGAACCCGGAAGTGGAGGTTGCAGTGAGCTGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS TCA 90 bp | AAACAATGGAAGTTGCCACAACTGCCCCCTCTGCAGAATGACCTCTaGGCCCACATGCAGGCAAAAATCAGAGCCAGAAAGCCCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KQWKLPQLPPLQNDL*AHMQAKIRARKPCS Trigger: ACTGCAGGGCTTTCTGGCTCTGATTTTTGCCTGCATGTGGGCTCAGAGGTCATTCTGCAGAGGGGGCAGTTGTGGCAACTTCCATTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS TCA 90 bp | TCTCCAGAAACAATGGAAGTTGCCACAACTGCCCCCTCTGCAGAATaGCCTCTGAGCCCACATGCAGGCAAAAATCAGAGCCAGAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SPETMEVATTAPSAE*PLSPHAGKNQSQKA Trigger: GGCTTTCTGGCTCTGATTTTTGCCTGCATGTGGGCTCAGAGGTCATTCTGCAGAGGGGGCAGTTGTGGCAACTTCCATTGTTTCTGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS TCA 90 bp | GGAATCAGCACCCAATCACTGAGAACTCAGGACAGGTTTATGGTGTaGTTAGAAACAGCCCTAGTGTCTTGCCCTCCCTTAGTTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: GISTQSLRTQDRFMV*LETALVSCPPLVVT Trigger: AGTGACAACTAAGGGAGGGCAAGACACTAGGGCTGTTTCTAATCACACCATAAACCTGTCCTGAGTTCTCAGTGATTGGGTGCTGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS TCA 90 bp | CTCTGCAGAAGGCGTCCCCTCATCTACTGCTCCACACCAGCAACCTaGAAGAAGAGAAATGCTGAGAAAACACAGATTTACTATGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LCRRRPLIYCSTPAT*KKRNAEKTQIYYGV Trigger: CACACCATAGTAAATCTGTGTTTTCTCAGCATTTCTCTTCTTTCAGGTTGCTGGTGTGGAGCAGTAGATGAGGGGACGCCTTCTGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS CCA 90 bp | CTTGATGCTCCACCCAAGTACAATTTCTGTCCACAGGGTGAGGCATaGAGCTCAATCATTTGTAAAATGTCTCTCAGGACTGGGGTACAA | + |
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Preference number: 5 (lower is better) Translates to: LDAPPKYNFCPQGEA*SSIICKMSLRTGVQ Trigger: TTGTACCCCAGTCCTGAGAGACATTTTACAAATGATTGAGCTCCATGCCTCACCCTGTGGACAGAAATTGTACTTGGGTGGAGCATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 ENST00000600619.1 |
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| CDS-3UTR CAA 90 bp | TGGATGTTTGGATACATGAGTCACATCAGAGAAGGCTCTTCTCAAAGGCTAGCCTACATTCATGAGTCCTaGTTCTACCGTGTGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: WMFGYMSHIREGSSQRLAYIHES*FYRVLS Trigger: GGAAAGCACACGGTAGAACAAGGACTCATGAATGTA...GGCTAGCCTTTGAGAAGAGCCTTCTCTGATGTGACTCATGTATCCAAACATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CAA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGTGGCACGATCATAGCTaGCTGCAGCCTCAAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: FSKASLQCRHTKLKQTNKWHDHS*LQPQTL Trigger: AAGAGTTTGAGGCTGCAGCAAGCTATGATCGTGCCA...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CAA 90 bp | TTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAACAAACTAACAAGGGAGCTGGTGAAGGTTaGAACTCATCCAGAAATCTC | + |
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Preference number: 5 (lower is better) Translates to: FSKASLQCRHTKLKQTNKGAGEG*NSSRNL Trigger: GAGATTTCTGGATGAGTTCAAACCTTCACCAGCTCC...CTTGTTAGTTTGTTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS TCA 90 bp | ACAGAAGATTATTGGTGTCCAGGCCCAGTAGACACCCATGGGAACTaGATACTAGGTGTGGAAGGACTATTTAAAAACATGTGCACATCT | + |
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Preference number: 5 (lower is better) Translates to: TEDYWCPGPVDTHGN*ILGVEGLFKNMCTS Trigger: AGATGTGCACATGTTTTTAAATAGTCCTTCCACACCTAGTATTCAGTTCCCATGGGTGTCTACTGGGCCTGGACACCAATAATCTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS-3UTR CAA 90 bp | CAGAGAAGGCTCTTCTCAAAGGCTAGCCTCCAGTGCCGTCATACCAAGTTAAAAGGCCTCTTTTCATTCTaGAAAACACTCAATAATACC | + |
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Preference number: 5 (lower is better) Translates to: QRRLFSKASLQCRHTKLKGLFSF*KTLNNT Trigger: GGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCC...TTTTAACTTGGTATGACGGCACTGGAGGCTAGCCTTTGAGAAGAGCCTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CAA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTACTGGATTCAGTGTATTaGAGAGGCTTTCGTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLLDSVY*RGFRPV Trigger: CACTGGACGAAAGCCTCTCAAATACACTGAATCCAG...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS-3UTR CAA 90 bp | ACCATGCCAGGCCTCTTTTCATTCTTGAAAACACTCAATAATACCTCAAATTTATCATCCAGAAATCTCTaGATGCTCCACCCAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: TMPGLFSFLKTLNNTSNLSSRNL*MLHPST Trigger: TGTACTTGGGTGGAGCATCAAGAGATTTCTGGATGA...TAAATTTGAGGTATTATTGAGTGTTTTCAAGAATGAAAAGAGGCCTGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600619.1 |
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| CDS TCA 72 bp | GCACCTAGGTCCAGATCCGGCACCCGCGGATGGAACTaGCACAAGCCAAAGTGCCCGCCACAGGGAGGACGC | + |
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Preference number: 6 (lower is better) Translates to: APRSRSGTRGWN*HKPKCPPQGGR Trigger: GCGTCCTCCCTGTGGCGGGCACTTTGGCTTGTGTCAGTTCCATCCGCGGGTGCCGGATCTGGACCTAGGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000600619.1 |
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| CDS GCA 72 bp | AACTGCCCCCTCTGCAGAATGACCTCTGAGCCCACATaGAGGCAAAAATCAGAGCCAGAAAGCCCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: NCPLCRMTSEPT*RQKSEPESPAV Trigger: CACTGCAGGGCTTTCTGGCTCTGATTTTTGCCTGCATGTGGGCTCAGAGGTCATTCTGCAGAGGGGGCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS TCA 72 bp | AAGTTGCCACAACTGCCCCCTCTGCAGAATGACCTCTaGGCCCACATGCAGGCAAAAATCAGAGCCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KLPQLPPLQNDL*AHMQAKIRARK Trigger: CTTTCTGGCTCTGATTTTTGCCTGCATGTGGGCTCAGAGGTCATTCTGCAGAGGGGGCAGTTGTGGCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS GCA 72 bp | CTGCAACCTCCACTTCCGGGTTCAAGCTATTCTTGGTaGGTCAGCCTTCAGAGCAGCTGGGATTATAGACGT | + |
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Preference number: 6 (lower is better) Translates to: LQPPLPGSSYSW*VSLQSSWDYRR Trigger: ACGTCTATAATCCCAGCTGCTCTGAAGGCTGACGCACCAAGAATAGCTTGAACCCGGAAGTGGAGGTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS CAA 90 bp | AAGTTCAAGCAATTATCTGCCTCAGCCTTCCAGGGTTTCACCACCTaGGCCAGGCTGTTATTGAACTCCCGACCTTGTGATCCACCCACC | + |
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Preference number: 6 (lower is better) Translates to: KFKQLSASAFQGFTT*ARLLLNSRPCDPPT Trigger: GGTGGGTGGATCACAAGGTCGGGAGTTCAATAACAGCCTGGCCAAGGTGGTGAAACCCTGGAAGGCTGAGGCAGATAATTGCTTGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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| CDS CAA 90 bp | CCCCTGATGAGAAGAGAGGACTTCGGTACACTGCACAGAAGATTATaGGTGTCCAGGCCCAGTAGACACCCATGGGAACTGAATACTAGG | + |
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Preference number: 6 (lower is better) Translates to: PLMRREDFGTLHRRL*VSRPSRHPWELNTR Trigger: CCTAGTATTCAGTTCCCATGGGTGTCTACTGGGCCTGGACACCAATAATCTTCTGTGCAGTGTACCGAAGTCCTCTCTTCTCATCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS CCA 72 bp | TCACTGCAACCTCCACTTCCGGGTTCAAGCTATTCTTaGTGCGTCAGCCTTCAGAGCAGCTGGGATTATAGA | + |
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Preference number: 6 (lower is better) Translates to: SLQPPLPGSSYS*CVSLQSSWDYR Trigger: TCTATAATCCCAGCTGCTCTGAAGGCTGACGCACCAAGAATAGCTTGAACCCGGAAGTGGAGGTTGCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS CAA 72 bp | CAGGTTTATGGTGTGATTAGAAACAGCCCTAGTGTCTaGCCCTCCCTTAGTTGTCACTCATTAGGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QVYGVIRNSPSV*PSLSCHSLGPG Trigger: GCCTGGCCCTAATGAGTGACAACTAAGGGAGGGCAAGACACTAGGGCTGTTTCTAATCACACCATAAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS CAA 72 bp | CCCTGTAAAGCAACCAGAGCCATCCTCGAATCCCAGTaGTGCAACTATACCAGACCTATAAGATGTATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCKATRAILESQ*CNYTRPIRCMP Trigger: GGGCATACATCTTATAGGTCTGGTATAGTTGCACAACTGGGATTCGAGGATGGCTCTGGTTGCTTTACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS CAA 90 bp | TCTTGGTCATTGACACTTCAAAAAGTCTGGTTTACTAAGTCTCTATaGACTCTACCATCTAGCTCCCCAGGCCACGTAGAGGCAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: SWSLTLQKVWFTKSL*TLPSSSPGHVEADL Trigger: CAGGTCTGCCTCTACGTGGCCTGGGGAGCTAGATGGTAGAGTCAATAGAGACTTAGTAAACCAGACTTTTTGAAGTGTCAATGACCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS CCA 72 bp | CCACCCAAGTACAATTTCTGTCCACAGGGTGAGGCATaGAGCTCAATCATTTGTAAAATGTCTCTCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: PPKYNFCPQGEA*SSIICKMSLRT Trigger: AGTCCTGAGAGACATTTTACAAATGATTGAGCTCCATGCCTCACCCTGTGGACAGAAATTGTACTTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 ENST00000600619.1 |
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| CDS TCA 72 bp | TATTGGTGTCCAGGCCCAGTAGACACCCATGGGAACTaGATACTAGGTGTGGAAGGACTATTTAAAAACATG | + |
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Preference number: 6 (lower is better) Translates to: YWCPGPVDTHGN*ILGVEGLFKNM Trigger: CATGTTTTTAAATAGTCCTTCCACACCTAGTATTCAGTTCCCATGGGTGTCTACTGGGCCTGGACACCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000598297.1 |
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| CDS CAA 72 bp | TTGACACTTCAAAAAGTCTGGTTTACTAAGTCTCTATaGACTCTACCATCTAGCTCCCCAGGCCACGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LTLQKVWFTKSL*TLPSSSPGHVE Trigger: CTCTACGTGGCCTGGGGAGCTAGATGGTAGAGTCAATAGAGACTTAGTAAACCAGACTTTTTGAAGTGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS TCA 72 bp | TACAAGACACACATTTCTAGAGATTTCTGCACACAGTaGTCTTGCAGTCATAGTCACTGGAACATTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: YKTHISRDFCTQ*SCSHSHWNICG Trigger: TCCACAAATGTTCCAGTGACTATGACTGCAAGATCACTGTGTGCAGAAATCTCTAGAAATGTGTGTCTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332854.11 ENST00000597700.6 |
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| CDS TCA 72 bp | TTTGAATCCCCACAAATGTTATATACCCTTTTAAGCTaGCAGAGTCCTATTATGTTTCCAAACTACTCAACA | + |
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Preference number: 6 (lower is better) Translates to: FESPQMLYTLLS*QSPIMFPNYST Trigger: TGTTGAGTAGTTTGGAAACATAATAGGACTCTGTCAGCTTAAAAGGGTATATAACATTTGTGGGGATTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000332854.11 ENST00000597700.6 ENST00000598297.1 |
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