RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF525 (Homo sapiens)

Ensembl gene IDs: ENSG00000203326

Ensembl transcript IDs: ENST00000467003.1, ENST00000474037.6, ENST00000475179.5, ENST00000491101.5, ENST00000497729.5, ENST00000593918.1

Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGCTCACTGCAATCTTGACCTCCCAGGTTCATGCCATCCTCCCTaGACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCAT +
Preference number: 1 (lower is better)
Translates to: IAHCNLDLPGSCHPP*TDFTITETAGMCHH
Trigger: ATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
3UTR GCA 90 bp AGTGGCATGATCATAGCTCACTGCAATCTTGACCTCCCAGGTTCATaGCATCCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGC +
Preference number: 1 (lower is better)
Translates to: SGMIIAHCNLDLPGS*HPPCTDFTITETAG
Trigger: GCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCATGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
3UTR GCA 90 bp GGGAAAATGGAATGCTTTCCTGTACGATCTCACATGATGCAAGAATaGTCTCACCCCTTCTATTCAATCAATACTGCCTGTCCTAGCCAG +
Preference number: 1 (lower is better)
Translates to: GKMECFPVRSHMMQE*SHPFYSINTACPSQ
Trigger: CTGGCTAGGACAGGCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCGTACAGGAAAGCATTCCATTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
3UTR TCA 90 bp ATAACCAAGCAGGGAAAATGGAATGCTTTCCTGTACGATCTCACATaGTGCAAGAATGCTCTCACCCCTTCTATTCAATCAATACTGCCT +
Preference number: 1 (lower is better)
Translates to: ITKQGKWNAFLYDLT*CKNALTPSIQSILP
Trigger: AGGCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCGTACAGGAAAGCATTCCATTTTCCCTGCTTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
3UTR CCA 72 bp GATTTCCCCACGTTTCCCAGGCTGGTCTTGAATACCTaGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: DFPTFPRLVLNT*AHVAHLSQPLK
Trigger: TTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAACGTGGGGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
3UTR TCA 72 bp AAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTaGGCCAAGATCGTGCAATTGCACTCCATCCTAAAC +
Preference number: 3 (lower is better)
Translates to: KTRLVPGSRRLR*AKIVQLHSILN
Trigger: GTTTAGGATGGAGTGCAATTGCACGATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593918.1
3UTR GCA 72 bp ATCATAGCTCACTGCAATCTTGACCTCCCAGGTTCATaGCATCCTCCCTGCACAGACTTCACAATAACTGAG +
Preference number: 3 (lower is better)
Translates to: IIAHCNLDLPGS*HPPCTDFTITE
Trigger: CTCAGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
3UTR GCA 72 bp GAATGCTTTCCTGTACGATCTCACATGATGCAAGAATaGTCTCACCCCTTCTATTCAATCAATACTGCCTGT +
Preference number: 3 (lower is better)
Translates to: ECFPVRSHMMQE*SHPFYSINTAC
Trigger: ACAGGCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCGTACAGGAAAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp GGAGTTCAAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTGAGCCAAGATCCGGGAGTCGGAGGTTaGGGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GVQNQACTRESEVAVSQDPGVGG*GEPRSC
Trigger: GCACGATCTTGGCTCACCGCAACCTCCGACTCCCGG...ATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTTGAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593918.1
CDS-3UTR GCA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCGACCTCCCAGGTTCATaGCATCCTCCCTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PPCTDFTITETAGMCHHADLPGS*HPPCTD
Trigger: GTCTGTGCAGGGAGGATGGCATGAACCTGGGAGGTC...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp CAAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTGAGCCAAGATCGTGCAGGCGGGCAAATCACTTaGGGTCAGGAGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QNQACTRESEVAVSQDRAGGQIT*GQEFKT
Trigger: GGTTTTGAACTCCTGACCTCAAGTGATTTGCCCGCC...TGCACGATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593918.1
CDS-3UTR GCA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCCTTGGCCTACCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PPCTDFTITETAGMCHHALGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGTAGGCCAAG...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTGACCTCCCAGGTTCATaGCATCCTCCCTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENADLPGS*HPPCTD
Trigger: GTCTGTGCAGGGAGGATGGCATGAACCTGGGAGGTC...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTATACCTGGGCTCATGTaGCCCACCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAIPGLM*PTCLSL
Trigger: GAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTAT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCTCACCCATGCTGGAGTaGAGTGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: PPCTDFTITETAGMCHHASPMLE*SGMIIA
Trigger: AGCTATGATCATGCCACTGCACTCCAGCATGGGTGA...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTGCCATCTCAGTTCACTaGATCCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAAISVH*ILHLLG
Trigger: ACCCAGGAGGTGGAGGATGCAGTGAACTGAGATGGC...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTTTCAAGAGATTCCCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAFKRFP*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAA...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CAAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTGAGCCAAGATCGTGCAGTCTCCCTTGTATTTTaGCTTTCAAAGAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QNQACTRESEVAVSQDRAVSLVF*LSKRAP
Trigger: GGGAGCTCTCTTTGAAAGGCAAAATACAAGGGAGAC...TGCACGATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593918.1
CDS-3UTR CCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACATACCTGGGCTCATGTaGCCCACCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNIPGLM*PTCLSL
Trigger: GAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTAT...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTACTCCTGACCTCAAGTaGTTTACCCACCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENATPDLK*FTHLGL
Trigger: TAGGCCAAGGTGGGTAAATCACTTGAGGTCAGGAGT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTGGAAGGTCTGCCTGCTaGTTCATGCATCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAGRSAC*FMHHCQ
Trigger: TTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCC...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTTGTGGAAGGTCTGCCTaGTGCTTCATGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENACGRSA*CFMHHC
Trigger: ACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACA...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTATGATGTGGAAGGTCTaGCTGCTGCTTCATGCATCA +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAMMWKV*LLLHAS
Trigger: TGATGCATGAAGCAGCAGGCAGACCTTCCACATCAT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCAGTGCCAGTTATTTCTaGGATGCAAGGATGGTTCAA +
Preference number: 4 (lower is better)
Translates to: PPCTDFTITETAGMCHHASASYF*DARMVQ
Trigger: TTGAACCATCCTTGCATCCCAGAAATAACTGGCACT...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTACAAGGGCCGAATTTTaGCTGAACATCTTACCACAC +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENATRAEF*LNILPH
Trigger: GTGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTATGATCATAGCTCACTaGAATCTTGACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAMIIAH*NLDLPG
Trigger: ACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCAT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCACCCATGCTGGAGTaGAGTGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNSPMLE*SGMIIA
Trigger: AGCTATGATCATGCCACTGCACTCCAGCATGGGTGA...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCCAGTTATTTCTGGGATaGAAGGATGGTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: PPCTDFTITETAGMCHHAQLFLG*KDGSTY
Trigger: ATATGTTGAACCATCCTTGCATCCCAGAAATAACTG...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACCTGCCTGCTGCTTCATaGATCACTGTCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNLPAAS*ITVNIV
Trigger: GACAATGTTGACAGTGATGCATGAAGCAGCAGGCAG...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACATGATGTGGAAGGTCTaGCTGCTGCTTCATGCATCA +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNMMWKV*LLLHAS
Trigger: TGATGCATGAAGCAGCAGGCAGACCTTCCACATCAT...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATCAGCATTTGCGCCGCTaGGGGACCTTCACTCCACGC +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYQHLRR*GTFTPR
Trigger: GCGTGGAGTGAAGGTCCCTCAGCGGCGCAAATGCTG...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467003.1
CDS-3UTR TCA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTTTTTCCAGAACTTCTTaGAGATCCCTTGTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GLEYLGSCGPPVSASENAFSRTS*RSLVLE
Trigger: TTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAA...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCATGCCATCCTCCCTaGACAGACTTCACAATAACT +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNSCHPP*TDFTIT
Trigger: AGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGA...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACATGATCATAGCTCACTaGAATCTTGACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNMIIAH*NLDLPG
Trigger: ACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCAT...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACCCTTCATTGTGCATTTaGAAGAGATACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNPSLCI*KRYPGR
Trigger: TCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGG...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR TCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCTTCCCAGGCTGGTCTTaGATACCTGGGCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSFPGWS*IPGLMW
Trigger: CCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAA...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTATGTTTCTGCTGTTTaGTGTCAGTCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNYVSAV*CQSSSL
Trigger: CAATGAAGAGGACTGACAGCAAACAGCAGAAACATA...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATTTCCCAGGCTGGTCTTaGATACCTGGGCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYFPGWS*IPGLMW
Trigger: CCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAA...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATGCCATCTCAGTTCACTaGATCCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYAISVH*ILHLLG
Trigger: ACCCAGGAGGTGGAGGATGCAGTGAACTGAGATGGC...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAATACCTGGGCTCATGTaGCCCACCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLIPGLM*PTCLSL
Trigger: GAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTAT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCTCACCCATGCTGGAGTaGAGTGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSSPMLE*SGMIIA
Trigger: AGCTATGATCATGCCACTGCACTCCAGCATGGGTGA...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCTGTGGAAGGTCTGCCTaGTGCTTCATGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSCGRSA*CFMHHC
Trigger: ACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACA...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATACAGGCTGGGAAAAGTaGCTCAGGTCTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYTGWEK*LRSVVQ
Trigger: CTGGACAACAGACCTGAGCCACTTTTCCCAGCCTGT...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTCTTGGCCTACCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFLGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGTAGGCCAAG...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCCTGCCTGCTGCTTCATaGATCACTGTCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSLPAAS*ITVNIV
Trigger: GACAATGTTGACAGTGATGCATGAAGCAGCAGGCAG...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATGGAAGGTCTGCCTGCTaGTTCATGCATCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYGRSAC*FMHHCQ
Trigger: TTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCC...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTTTCAAGAGATTCCCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFFKRFP*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAA...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATTCAAGAGATTCCCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLFKRFP*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAACAGGCTGGGAAAAGTaGCTCAGGTCTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLTGWEK*LRSVVQ
Trigger: CTGGACAACAGACCTGAGCCACTTTTCCCAGCCTGT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR TCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAACTCCTGACCTCAAGTaGTTTACCCACCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLTPDLK*FTHLGL
Trigger: TAGGCCAAGGTGGGTAAATCACTTGAGGTCAGGAGT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATCTGCCTGCTGCTTCATaGATCACTGTCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYLPAAS*ITVNIV
Trigger: GACAATGTTGACAGTGATGCATGAAGCAGCAGGCAG...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATGTGGAAGGTCTGCCTaGTGCTTCATGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLCGRSA*CFMHHC
Trigger: ACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATCTGATCTCAAACTCCTaGCCTCAAGTGATTTACCCA +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYLISNS*PQVIYP
Trigger: TGGGTAAATCACTTGAGGTCAGGAGTTTGAGATCAG...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATGCAGGGAAAATGGAATaGTTTCCTGTACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYAGKME*FPVRSH
Trigger: GTGAGATCGTACAGGAAAGCATTCCATTTTCCCTGC...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATTCATGCCATCCTCCCTaGACAGACTTCACAATAACT +
Preference number: 4 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYSCHPP*TDFTIT
Trigger: AGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGA...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCACCAAGCAGGGAAAATaGAATGCTTTCCTGTACGAT +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSTKQGK*NAFLYD
Trigger: ATCGTACAGGAAAGCATTCCATTTTCCCTGCTTGGT...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CCA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCAGTGCCAGTTATTTCTaGGATGCAAGGATGGTTCAA +
Preference number: 4 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSSASYF*DARMVQ
Trigger: TTGAACCATCCTTGCATCCCAGAAATAACTGGCACT...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTGCAGGGAAAATGGAATaGTTTCCTGTACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFAGKME*FPVRSH
Trigger: GTGAGATCGTACAGGAAAGCATTCCATTTTCCCTGC...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATCATGCCATCCTCCCTaGACAGACTTCACAATAACT +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLSCHPP*TDFTIT
Trigger: AGTTATTGTGAAGTCTGTGCAGGGAGGATGGCATGA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAATGATCATAGCTCACTaGAATCTTGACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLMIIAH*NLDLPG
Trigger: ACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCAT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTACCTTCATTGTGCATTTaGAAGAGATACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLPSLCI*KRYPGR
Trigger: TCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGG...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR TCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATTTTCCAGAACTTCTTaGAGATCCCTTGTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLFSRTS*RSLVLE
Trigger: TTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR TCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTTTTTCCAGAACTTCTTaGAGATCCCTTGTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFFSRTS*RSLVLE
Trigger: TTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAA...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATATGTTTCTGCTGTTTaGTGTCAGTCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLYVSAV*CQSSSL
Trigger: CAATGAAGAGGACTGACAGCAAACAGCAGAAACATA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTTATGTTTCTGCTGTTTaGTGTCAGTCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFYVSAV*CQSSSL
Trigger: CAATGAAGAGGACTGACAGCAAACAGCAGAAACATA...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTTCTGGGATGCAAGGATaGTTCAACATATTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFSGMQG*FNIFKQ
Trigger: TTGCTTGAATATGTTGAACCATCCTTGCATCCCAGA...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CCA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATCTGGGATGCAAGGATaGTTCAACATATTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLSGMQG*FNIFKQ
Trigger: TTGCTTGAATATGTTGAACCATCCTTGCATCCCAGA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTCATATTCAGTGGATTTaGACAATACAGTATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFHIQWI*TIQYQH
Trigger: GTGCTGATACTGTATTGTGCAAATCCACTGAATATG...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR GCA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTCAGTTATTTCTGGGATaGAAGGATGGTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFQLFLG*KDGSTY
Trigger: ATATGTTGAACCATCCTTGCATCCCAGAAATAACTG...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp CAAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTGAGCCAAGATCGTGCATGTAATCCCAGCACATaGAGAGGCCAAGGCGGGCAA +
Preference number: 5 (lower is better)
Translates to: QNQACTRESEVAVSQDRACNPST*RGQGGQ
Trigger: TTGCCCGCCTTGGCCTCTCAATGTGCTGGGATTACA...TGCACGATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593918.1
CDS TCA 90 bp GCTGAGGTGGGACAATCACTTGAGCCCAGGAATTCAAGATTGCAGTaGGCCATGATCACACCATTGCACCCCACCCTTGGGGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: AEVGQSLEPRNSRLQ*AMITPLHPTLGDRE
Trigger: CTCTCTGTCCCCAAGGGTGGGGTGCAATGGTGTGATCATGGCTCACTGCAATCTTGAATTCCTGGGCTCAAGTGATTGTCCCACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497729.5
CDS-3UTR CAA 90 bp CCTCCCTGCACAGACTTCACAATAACTGAGACGGCAGGCATGTGCCACCATGCCTCCTTCATTGTGCATTaGGAAGAGATACCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PPCTDFTITETAGMCHHASFIVH*EEIPRE
Trigger: CTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGA...GGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTGTGCAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp GGAGTTCAAAACCAGGCTTGTACCCGGGAGTCGGAGGTTGCGGTGAGCCAAGATTGTCTCCCTTGTATTTaGCCTTTCAAAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GVQNQACTRESEVAVSQDCLPCI*PFKESS
Trigger: GGAGCTCTCTTTGAAAGGCAAAATACAAGGGAGACA...ATCTTGGCTCACCGCAACCTCCGACTCCCGGGTACAAGCCTGGTTTTGAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593918.1
CDS TCA 90 bp TGGGACAATCACTTGAGCCCAGGAATTCAAGATTGCAGTGAGCCATaGTCACACCATTGCACCCCACCCTTGGGGACAGAGAGAGAGATA +
Preference number: 5 (lower is better)
Translates to: WDNHLSPGIQDCSEP*SHHCTPPLGTEREI
Trigger: TATCTCTCTCTCTGTCCCCAAGGGTGGGGTGCAATGGTGTGATCATGGCTCACTGCAATCTTGAATTCCTGGGCTCAAGTGATTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497729.5
CDS-3UTR CAA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTTTCCCAGGCTGGTCTaGAATACCTGGGCTCATGTG +
Preference number: 5 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNFPRLV*NTWAHV
Trigger: CACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAA...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTACAAGGGCCGAATTTaGACTGAACATCTTACCACA +
Preference number: 5 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNYKGRI*TEHLTT
Trigger: TGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGTA...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp GGTCTTGAATACCTGGGCTCATGTGGCCCACCTGTCTCAGCCTCTGAAAATGCTACATATTCAGTGGATTaGCACAATACAGTATCAGCA +
Preference number: 5 (lower is better)
Translates to: GLEYLGSCGPPVSASENATYSVD*HNTVSA
Trigger: TGCTGATACTGTATTGTGCAAATCCACTGAATATGT...AGCATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACGCATCACTGTCAACATaGTCTTGCCCTAACTCAAAA +
Preference number: 5 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNASLST*SCPNSK
Trigger: TTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGC...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp TGGAAGGTCTGCCTGCTGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACACATATTCAGTGGATTaGCACAATACAGTATCAGCA +
Preference number: 5 (lower is better)
Translates to: WKVCLLLHASLSTLSCPNTYSVD*HNTVSA
Trigger: TGCTGATACTGTATTGTGCAAATCCACTGAATATGT...GTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCTTTCCCAGGCTGGTCTaGAATACCTGGGCTCATGTG +
Preference number: 5 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSFPRLV*NTWAHV
Trigger: CACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAA...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAAGTGATTTACCCACCTaGGCCTACCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLSDLPT*AYQSAG
Trigger: CCCAGCACTTTGGTAGGCCAAGGTGGGTAAATCACT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTAGTGGCTCAGGTCTGTaGTCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFSGSGL*SRLISN
Trigger: GTTTGAGATCAGCCTGGACAACAGACCTGAGCCACT...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTAAGTGGCTCAGGTCTGTaGTCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLSGSGL*SRLISN
Trigger: GTTTGAGATCAGCCTGGACAACAGACCTGAGCCACT...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp AGTTATCCGTTTACAAACTGTTTATTTCTTTTGGGCATTGTCCCCATAACCTTTTTTCCCAGGCTGGTCTaGAATACCTGGGCTCATGTG +
Preference number: 5 (lower is better)
Translates to: SYPFTNCLFLLGIVPITFFPRLV*NTWAHV
Trigger: CACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAA...AAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp CAGTTATTTCTGGGATGCAAGGATGGTTCAACATATTCAAGCAAATCAATGTTATCCTTCATTGTGCATTaGGAAGAGATACCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: QLFLGCKDGSTYSSKSMLSFIVH*EEIPRE
Trigger: CTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGA...TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp TGCTTCATGCATCACTGTCAACATTGTCTTGCCCTAACTCAAAATAAGTTATCCCTATGTTTCTGCTGTTaGCTGTCAGTCCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: CFMHHCQHCLALTQNKLSLCFCC*LSVLFI
Trigger: AATGAAGAGGACTGACAGCAAACAGCAGAAACATAG...GGATAACTTATTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATTACAAGGGCCGAATTTaGACTGAACATCTTACCACA +
Preference number: 5 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYYKGRI*TEHLTT
Trigger: TGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGTA...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467003.1
ENST00000474037.6
CDS-3UTR CAA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATGCATCACTGTCAACATaGTCTTGCCCTAACTCAAAA +
Preference number: 5 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYASLST*SCPNSK
Trigger: TTTTGAGTTAGGGCAAGACAATGTTGACAGTGATGC...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS-3UTR CAA 90 bp TTCCAGAACTTCTTGAAGATCCCTTGTCCTAGAAAACTGTATTCAAGAGGATATCTATGTTTCTGCTGTTaGCTGTCAGTCCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: FQNFLKIPCPRKLYSRGYLCFCC*LSVLFI
Trigger: AATGAAGAGGACTGACAGCAAACAGCAGAAACATAG...ATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467003.1
ENST00000474037.6
ENST00000475179.5
CDS TCA 90 bp TATTTCAAATGCAAATATTTAACTCTGCACTCAGAAGGCAAAGACTaGCTCAATCAACAGGAACCAACTACTTGTTGTCCACAGAAGACT +
Preference number: 5 (lower is better)
Translates to: YFKCKYLTLHSEGKD*LNQQEPTTCCPQKT
Trigger: AGTCTTCTGTGGACAACAAGTAGTTGGTTCCTGTTGATTGAGTCAGTCTTTGCCTTCTGAGTGCAGAGTTAAATATTTGCATTTGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491101.5
CDS TCA 72 bp CACTTGAGCCCAGGAATTCAAGATTGCAGTGAGCCATaGTCACACCATTGCACCCCACCCTTGGGGACAGAG +
Preference number: 6 (lower is better)
Translates to: HLSPGIQDCSEP*SHHCTPPLGTE
Trigger: CTCTGTCCCCAAGGGTGGGGTGCAATGGTGTGATCATGGCTCACTGCAATCTTGAATTCCTGGGCTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497729.5
CDS TCA 72 bp GGACAATCACTTGAGCCCAGGAATTCAAGATTGCAGTaGGCCATGATCACACCATTGCACCCCACCCTTGGG +
Preference number: 6 (lower is better)
Translates to: GQSLEPRNSRLQ*AMITPLHPTLG
Trigger: CCCAAGGGTGGGGTGCAATGGTGTGATCATGGCTCACTGCAATCTTGAATTCCTGGGCTCAAGTGATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497729.5