RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF524 (Homo sapiens)

Ensembl gene IDs: ENSG00000171443

Ensembl transcript IDs: ENST00000301073.4, ENST00000589521.1, ENST00000591046.1

Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAAGGCAGCTGGACCCCAAAGTTTAGGTCTCCACCCTCCACCTaGTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCC +
Preference number: 1 (lower is better)
Translates to: AEGSWTPKFRSPPST*SHNGKTTGNKGVPA
Trigger: GGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACTTTGGGGTCCAGCTGCCTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
3UTR-3UTR GCA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGACCAGCCAAACTCCCTaGTCTAAACCTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKTSQTP*SKPGPG
Trigger: CCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
3UTR-3UTR GCA 90 bp AGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGACCAGCCAAACTCCCTaGTCTAAACCTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: RQRFISTAPASKGLLVWGTSQTP*SKPGPG
Trigger: CCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT...CCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
3UTR GCA 72 bp AGCTGGACCCCAAAGTTTAGGTCTCCACCCTCCACCTaGTCCCACAACGGGAAGACCACCGGAAACAAGGGT +
Preference number: 3 (lower is better)
Translates to: SWTPKFRSPPST*SHNGKTTGNKG
Trigger: ACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACTTTGGGGTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCTGCACGCGGTGGTGGTaGGCCAGCTCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPCTRWW*ASSPAS
Trigger: CGAGGCGGGCGAGCTGGCGCACCACCACCGCGTGCA...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCTGCTGTGGCCGGGATaGCCTCCTCGTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: QREDHRKQGCPGPLAQAQLLWPG*PPRPTA
Trigger: CGCCGTGGGACGAGGAGGGCATCCCGGCCACAGCAG...CTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGAGTGCACGCGGTGGTaGTGCGCCAGCTCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPECTRW*CASSPA
Trigger: GGCGGGCGAGCTGGCGCACCACCACCGCGTGCACTC...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCACCTCGGCCCCTGCTGTaGCCGGGATGCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GRPPETRVSRPPGSGPAPPRPLL*PGCPPR
Trigger: ACGAGGAGGGCATCCCGGCCACAGCAGGGGCCGAGG...TGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCGATGGCCGGGGGTGTaGGTCAGGCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: QREDHRKQGCPGPLAQAQRWPGV*VRPAPL
Trigger: AAGGGGAGCCGGCCTGACCCACACCCCCGGCCATCG...CTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCACCCATGGCCTCCGGGTaGTTGCGCTTCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: GRPPETRVSRPPGSGPAPPMASG*LRFAWR
Trigger: GCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGG...TGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CCAGCACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGCTCCTCCTCGGCCCCTaGTGTGGCCGGGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: PAPAKLPALNLAQGAMAGLLLGP*CGRDAL
Trigger: GAGGGCATCCCGGCCACAGCAGGGGCCGAGGAGGAG...CCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGGCCGCAGGCCGGCATaGATGTTGCAGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPGRRPA*MLQCRR
Trigger: GCGGCGGCACTGCAACATCCATGCCGGCCTGCGGCC...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCCGCAGGCCGGCATaGATGTTGCAGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPAPTTGRPPETRVSRPPGRRPA*MLQCRR
Trigger: GCGGCGGCACTGCAACATCCATGCCGGCCTGCGGCC...AGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCGGCCGGCATGGATGTTaGAGTGCCGCCGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPGRHGC*SAAAGG
Trigger: GCCACCTGCGGCGGCACTGCAACATCCATGCCGGCC...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp TCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGGGCCGGCATGGATGTTaGAGTGCCGCCGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SHNGKTTGNKGVPAPWLRGRHGC*SAAAGG
Trigger: GCCACCTGCGGCGGCACTGCAACATCCATGCCGGCC...CCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGCCCGAGTGCACGCGGTaGTGGTGCGCCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVPECTR*WCASSP
Trigger: GGGCGAGCTGGCGCACCACCACCGCGTGCACTCGGG...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCAGTGCTTGCGCTTCGCATaGCGCCGGAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EDHRKQGCPGPLAQAQHQCLRFA*RRSVLA
Trigger: GGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCA...CTGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR TCA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCGTGCGGCTTCAGCTCTaGGTGCGAGATGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSVRLQL*VRDAVA
Trigger: CGCCACAGCATCTCGCACTCAGAGCTGAAGCCGCAC...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCTGGAGCCAGCTCATTTaGATGTCGCCGGGGCTCGCG +
Preference number: 4 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSWSQLI*MSPGLA
Trigger: CGCGAGCCCCGGCGACATGCAAATGAGCTGGCTCCA...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301073.4
CDS-3UTR GCA 90 bp GGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCGGCTTCAGCTCTGAGTaGGAGATGCTGTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GKTTGNKGVPAPWLRPSTGFSSE*EMLWRS
Trigger: GGAGCGCCACAGCATCTCGCACTCAGAGCTGAAGCC...GGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp ACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGGGTGTCCCATGGCCTCCGGGTaGTTGCGCTTCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: TSQTPCSKPGPGSDGRGCPMASG*LRFAWR
Trigger: GCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGG...ACACCCCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCTCCTCCTCGGCCCCTaGTGTGGCCGGGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSLLLGP*CGRDAL
Trigger: GAGGGCATCCCGGCCACAGCAGGGGCCGAGGAGGAG...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCGTGTCCATTGAGCAGTaGGGGGCTTGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GKTTGNKGVPAPWLRPSTVSIEQ*GAWVWA
Trigger: TGCCCAGACCCAAGCCCCCCACTGCTCAATGGACAC...GGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGCCACTGCTGCCTACTaGGGCTGTCACCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PPAPTTGRPPETRVSRPPATAAY*GCHPLH
Trigger: GTGCAGGGGGTGACAGCCCCAGTAGGCAGCAGTGGC...AGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCACACCGGGCAGAAGTGTaGGGCCTTCCTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPHRAEV*GLPGAR
Trigger: TCTGGCCCCAGGAAGGCCCCACACTTCTGCCCGGTG...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCTGCTTGCGCTTCGCATaGCGCCGGAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPCLRFA*RRSVLA
Trigger: GGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCA...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAACAGGGGTACCCCCATaGCCTCCGGGTGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPTGVPP*PPGACA
Trigger: AGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGT...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCCGGCGGTTCAGACCCTaGATCTGGTGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSRRFRP*IWCTQG
Trigger: CCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCG...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTGGCCCAGGGAGCGATaGCCGGGGGTGTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVWPRER*PGVWVR
Trigger: CCTGACCCACACCCCCGGCCATCGCTCCCTGGGCCA...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR TCA 90 bp CCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGTGCGGCTTCAGCTCTaGGTGCGAGATGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PPAPTTGRPPETRVSRPPVRLQL*VRDAVA
Trigger: CGCCACAGCATCTCGCACTCAGAGCTGAAGCCGCAC...AGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp TCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCGCTCTGAGTGCGAGATaGTGTGGCGCTCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: STCSHNGKTTGNKGVPAPALSAR*CGAPGR
Trigger: CCGACCTGGAGCGCCACAGCATCTCGCACTCAGAGC...GGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCTCTGAGTGCGAGATaGTGTGGCGCTCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPALSAR*CGAPGR
Trigger: CCGACCTGGAGCGCCACAGCATCTCGCACTCAGAGC...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp TCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCGCATGGATGTTGCAGTaGCGCCGCAGGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: STCSHNGKTTGNKGVPAPAWMLQ*RRRWLE
Trigger: CTCCAGCCACCTGCGGCGGCACTGCAACATCCATGC...GGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGTCTCCACCCTCCACCTaGTCCCACAACGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: QREDHRKQGCPGPLAQAQSPPST*SHNGKT
Trigger: GGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGA...CTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGGTGTCCATTGAGCAGTaGGGGGCTTGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QREDHRKQGCPGPLAQAQVSIEQ*GAWVWA
Trigger: TGCCCAGACCCAAGCCCCCCACTGCTCAATGGACAC...CTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCTCCGATTTGAGGAGGTaGCTCCCCCAGGACGACGGC +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPSDLRR*LPQDDG
Trigger: GCCGTCGTCCTGGGGGAGCCACCTCCTCAAATCGGA...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCAGCACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGGAGTGCGAGATGCTGTaGCGCTCCAGGTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PAPAKLPALNLAQGAMAGECEML*RSRSER
Trigger: CCTCTCCGACCTGGAGCGCCACAGCATCTCGCACTC...CCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGAGTGCGAGATGCTGTaGCGCTCCAGGTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPECEML*RSRSER
Trigger: CCTCTCCGACCTGGAGCGCCACAGCATCTCGCACTC...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCAGCGCAGCCGGCAGATaGGGCACTGGTACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSSAAGR*GTGTGA
Trigger: AGCGCCCGTACCAGTGCCCCATCTGCCGGCTGCGCT...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR TCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGAGGGAGGGAGGCCTTaGGTGTCCGATTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPEGGRP*VSDLRR
Trigger: CCTCCTCAAATCGGACACTCAAGGCCTCCCTCCCTC...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CCAGCACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGTCTCCACCCTCCACCTaGTCCCACAACGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: PAPAKLPALNLAQGAMAGSPPST*SHNGKT
Trigger: GGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGA...CCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp TCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCGCAACGGGTCTGGGCTaGGGGTGTCCATTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: STCSHNGKTTGNKGVPAPATGLG*GCPLSS
Trigger: ACTGCTCAATGGACACCCCCAGCCCAGACCCGTTGC...GGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCGCAACGGGTCTGGGCTaGGGGTGTCCATTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPATGLG*GCPLSS
Trigger: ACTGCTCAATGGACACCCCCAGCCCAGACCCGTTGC...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGCACCGGGCAGAAGTGTaGGGCCTTCCTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVHRAEV*GLPGAR
Trigger: TCTGGCCCCAGGAAGGCCCCACACTTCTGCCCGGTG...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCCCGCAAACCTTGCACTaGTGCGGCTTCAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSPQTLH*CGFSSE
Trigger: CTCAGAGCTGAAGCCGCACCAGTGCAAGGTTTGCGG...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AGTTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAGAGTGCACGCGGTGGTaGTGCGCCAGCTCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLGLHPPPAPTTGRPPETECTRW*CASSPA
Trigger: GGCGGGCGAGCTGGCGCACCACCACCGCGTGCACTC...TGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGTGCACGCGGTGGTGGTaGGCCAGCTCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: AEIYFHSPCLQGSVSLGECTRWW*ASSPAS
Trigger: CGAGGCGGGCGAGCTGGCGCACCACCACCGCGTGCA...CTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CCAGCACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGAGACCCTGGATCTGGTaGACACAGGGGTACCCCCAT +
Preference number: 4 (lower is better)
Translates to: PAPAKLPALNLAQGAMAGRPWIW*TQGYPH
Trigger: ATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCT...CCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCGATTTGAGGAGGTaGCTCCCCCAGGACGACGGC +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVSDLRR*LPQDDG
Trigger: GCCGTCGTCCTGGGGGAGCCACCTCCTCAAATCGGA...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp ACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCACCGCAAACCTTGCACTaGTGCGGCTTCAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TTGRPPETRVSRPPGSGPPQTLH*CGFSSE
Trigger: CTCAGAGCTGAAGCCGCACCAGTGCAAGGTTTGCGG...TGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCTTCAGACCCTGGATCTaGTGCACACAGGGGTACCCC +
Preference number: 4 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPFRPWI*CTQGYP
Trigger: GGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAA...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AGTTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACACCTCGGCCCCTGCTGTaGCCGGGATGCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLGLHPPPAPTTGRPPETPRPLL*PGCPPR
Trigger: ACGAGGAGGGCATCCCGGCCACAGCAGGGGCCGAGG...TGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGTGGCCCAGGGAGCGATaGCCGGGGGTGTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGWPRER*PGVWVR
Trigger: CCTGACCCACACCCCCGGCCATCGCTCCCTGGGCCA...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCAGGGGGCTGAAGGCAGCTaGACCCCAAAGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: EDHRKQGCPGPLAQAQHQGAEGS*TPKFRS
Trigger: AGACCTAAACTTTGGGGTCCAGCTGCCTTCAGCCCC...CTGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR TCA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCGAGGGAGGGAGGCCTTaGGTGTCCGATTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSEGGRP*VSDLRR
Trigger: CCTCCTCAAATCGGACACTCAAGGCCTCCCTCCCTC...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGGGCTTCAGCTCTGAGTaGGAGATGCTGTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVGFSSE*EMLWRS
Trigger: GGAGCGCCACAGCATCTCGCACTCAGAGCTGAAGCC...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp TCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCCAAACCTTGCACTGGTaGGGCTTCAGCTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: STCSHNGKTTGNKGVPAPQTLHW*GFSSEC
Trigger: GCACTCAGAGCTGAAGCCGCACCAGTGCAAGGTTTG...GGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp ACCAGCCAAACTCCCTGCTCTAAACCTGGCCCAGGGAGCGATGGCCGGGGGTGTACCAGCCAAACTCCCTaGTCTAAACCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSQTPCSKPGPGSDGRGCTSQTP*SKPGPG
Trigger: CCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT...ACACCCCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCTATTTCCACAGCCCCTaGCTCCAAGGGTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: GKTTGNKGVPAPWLRPSTYFHSP*LQGSVS
Trigger: ACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATA...GGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp TCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCCTTGGGTCTGGGCACTaGAGCCAGCTCATTTGCATG +
Preference number: 4 (lower is better)
Translates to: STCSHNGKTTGNKGVPAPLGSGH*SQLICM
Trigger: CATGCAAATGAGCTGGCTCCAGTGCCCAGACCCAAG...GGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000301073.4
CDS-3UTR CCA 90 bp AGCAGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGCCCGAGTGCACGCGGTaGTGGTGCGCCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SRQRFISTAPASKGLLVWPECTR*WCASSP
Trigger: GGGCGAGCTGGCGCACCACCACCGCGTGCACTCGGG...CCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGAGCGCAGCCGGCAGATaGGGCACTGGTACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGSAAGR*GTGTGA
Trigger: AGCGCCCGTACCAGTGCCCCATCTGCCGGCTGCGCT...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGCGATGGCCGGGGGTGTaGGTCAGGCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RQRFISTAPASKGLLVWGRWPGV*VRPAPL
Trigger: AAGGGGAGCCGGCCTGACCCACACCCCCGGCCATCG...CCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGTGGCCTCCGGGTGCTTaGGCTTCGCATGGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: AEIYFHSPCLQGSVSLGEWPPGA*ASHGAG
Trigger: TCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCA...CTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp AGCAGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGCTGCTGTGGCCGGGATaGCCTCCTCGTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: SRQRFISTAPASKGLLVWLLWPG*PPRPTA
Trigger: CGCCGTGGGACGAGGAGGGCATCCCGGCCACAGCAG...CCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCGAGGGGCAGAGTCAGTaGTCACAGGGTCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSEGQSQ*SQGLEH
Trigger: GTGCTCTAGACCCTGTGAGCACTGACTCTGCCCCTC...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS-3UTR CCA 90 bp AGTTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAGCCACTGCTGCCTACTaGGGCTGTCACCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLGLHPPPAPTTGRPPETATAAY*GCHPLH
Trigger: GTGCAGGGGGTGACAGCCCCAGTAGGCAGCAGTGGC...TGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGACAGGGGTACCCCCATaGCCTCCGGGTGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKTGVPP*PPGACA
Trigger: AGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGT...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCAAACCTTGCACTGGTaGGGCTTCAGCTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSQTLHW*GFSSEC
Trigger: GCACTCAGAGCTGAAGCCGCACCAGTGCAAGGTTTG...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCTTGCCGCAAACCTTaGACTGGTGCGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVSCRKP*TGAASA
Trigger: AGCTGAAGCCGCACCAGTGCAAGGTTTGCGGCAAGA...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGCGGCGGTTCAGACCCTaGATCTGGTGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGRRFRP*IWCTQG
Trigger: CCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCG...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp AGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGGCATGGATGTTGCAGTaGCGCCGCAGGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RQRFISTAPASKGLLVWGAWMLQ*RRRWLE
Trigger: CTCCAGCCACCTGCGGCGGCACTGCAACATCCATGC...CCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AGTTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACATTCAGACCCTGGATCTaGTGCACACAGGGGTACCCC +
Preference number: 4 (lower is better)
Translates to: SLGLHPPPAPTTGRPPETFRPWI*CTQGYP
Trigger: GGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAA...TGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGTCTTGCCGCAAACCTTaGACTGGTGCGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGSCRKP*TGAASA
Trigger: AGCTGAAGCCGCACCAGTGCAAGGTTTGCGGCAAGA...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp GCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGACCAGCCAAACTCCCTaGTCTAAACCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEIYFHSPCLQGSVSLGETSQTP*SKPGPG
Trigger: CCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGT...CTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp AGCAGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGAGACCCTGGATCTGGTaGACACAGGGGTACCCCCAT +
Preference number: 4 (lower is better)
Translates to: SRQRFISTAPASKGLLVWRPWIW*TQGYPH
Trigger: ATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCT...CCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CCA 90 bp AGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGGGGGCTGAAGGCAGCTaGACCCCAAAGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RQRFISTAPASKGLLVWGGAEGS*TPKFRS
Trigger: AGACCTAAACTTTGGGGTCCAGCTGCCTTCAGCCCC...CCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCT
56% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR GCA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGTATTTCCACAGCCCCTaGCTCCAAGGGTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKYFHSP*LQGSVS
Trigger: ACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATA...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR TCA 90 bp AGTTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACATGGTGGGTAAAACAGTaGGATGATCTTGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: SLGLHPPPAPTTGRPPETWWVKQ*DDLVSA
Trigger: AGCTGATACAAGATCATCTCACTGTTTTACCCACCA...TGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS GCA 90 bp GGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCAGCCAAACTCCCTaGTCTAAACCTGGCCCAGGGAGCGATGGCCGGGGGTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GVPAPWLRPSTSQTP*SKPGPGSDGRGCGS
Trigger: TGACCCACACCCCCGGCCATCGCTCCCTGGGCCAGGTTTAGAGCAGGGAGTTTGGCTGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS GCA 90 bp CGGGATGCCCTCCTCGTCCCACGGCGGTTCAGACCCTGGATCTGGTaGACACAGGGGTACCCCCATGGCCTCCGGGTGCTTGCGCTTCGC +
Preference number: 5 (lower is better)
Translates to: RDALLVPRRFRPWIW*TQGYPHGLRVLALR
Trigger: GCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAGGGCATCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp GGCCGGGATGCCCTCCTCGTCCCACGGCGGTTCAGACCCTGGATCTaGTGCACACAGGGGTACCCCCATGGCCTCCGGGTGCTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: GRDALLVPRRFRPWI*CTQGYPHGLRVLAL
Trigger: AAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAGGGCATCCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp CCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCATGGCCTCCGGGTGCTaGCGCTTCGCATGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PPPAPTTGRPPETRVSRPMASGC*RFAWRR
Trigger: CCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCAT...GGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp CTGATCATCGATCAGGAGGAGGTCGCTCCCGCCACTGCTGCCTACTaGGGCTGTCACCCCCTGCACCTGCACCAGTGGGGGCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LIIDQEEVAPATAAY*GCHPLHLHQWGLLP
Trigger: GGGCAGGAGCCCCCACTGGTGCAGGTGCAGGGGGTGACAGCCCCAGTAGGCAGCAGTGGCGGGAGCGACCTCCTCCTGATCGATGATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301073.4
ENST00000589521.1
ENST00000591046.1
CDS CCA 90 bp GCACACAGGGGTACCCCCATGGCCTCCGGGTGCTTGCGCTTCGCATaGCGCCGGAGCGTGTTGGCCTCTGTAAAGCGCAGCCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: AHRGTPMASGCLRFA*RRSVLASVKRSRQM
Trigger: CATCTGCCGGCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp ACGGCGGTTCAGACCCTGGATCTGGTGCACACAGGGGTACCCCCATaGCCTCCGGGTGCTTGCGCTTCGCATGGCGCCGGAGCGTGTTGG +
Preference number: 5 (lower is better)
Translates to: TAVQTLDLVHTGVPP*PPGACASHGAGACW
Trigger: CCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp TGCTGTGGCCGGGATGCCCTCCTCGTCCCACGGCGGTTCAGACCCTaGATCTGGTGCACACAGGGGTACCCCCATGGCCTCCGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CCGRDALLVPRRFRP*IWCTQGYPHGLRVL
Trigger: AAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAGGGCATCCCGGCCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCTGGCGCCGGAGCGTGTaGGCCTCTGTAAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSWRRSV*ASVKRS
Trigger: GCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCA...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS GCA 90 bp GACCCTGGATCTGGTGCACACAGGGGTACCCCCATGGCCTCCGGGTaGTTGCGCTTCGCATGGCGCCGGAGCGTGTTGGCCTCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: DPGSGAHRGTPMASG*LRFAWRRSVLASVK
Trigger: CTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGAGGCCGGCATGGATGTaGCAGTGCCGCCGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVRPAWM*QCRRRW
Trigger: CCACCTGCGGCGGCACTGCAACATCCATGCCGGCCT...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp GGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGCTGGAGCCAGCTCATTaGCATGTCGCCGGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: GLHPPPAPTTGRPPETRVLEPAH*HVAGAR
Trigger: GCGAGCCCCGGCGACATGCAAATGAGCTGGCTCCAG...CACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301073.4
CDS-3UTR CAA 90 bp TCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCGAGGGAGGGAGGCCTaGAGTGTCCGATTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SHNGKTTGNKGVPAPWLRRGREA*SVRFEE
Trigger: CTCCTCAAATCGGACACTCAAGGCCTCCCTCCCTCG...CCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp AACGGGAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCGAGCGCTTGAAGGTCTaGCCGCAAACCTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: NGKTTGNKGVPAPWLRPSERLKV*PQTLHW
Trigger: CCAGTGCAAGGTTTGCGGCAAGACCTTCAAGCGCTC...GCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp AAAGGCGAAGGCAACGGGTCTGGGCTGGGGGTGTCCATTGAGCAGTaGGGGGCTTGGGTCTGGGCACTGGAGCCAGCTAAGAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: KGEGNGSGLGVSIEQ*GAWVWALEPAKRRE
Trigger: CTCTCTCCTCTTAGCTGGCTCCAGTGCCCAGACCCAAGCCCCCCACTGCTCAATGGACACCCCCAGCCCAGACCCGTTGCCTTCGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS CCA 90 bp AAAGGCGAAGGCAACGGGTCTGGGCTGGGGGTGTCCATTGAGCAGTaGGGGGCTTGGGTCTGGGCACTGGAGCCAGCTCGAAACGCCTTT +
Preference number: 5 (lower is better)
Translates to: KGEGNGSGLGVSIEQ*GAWVWALEPARNAF
Trigger: AAAGGCGTTTCGAGCTGGCTCCAGTGCCCAGACCCAAGCCCCCCACTGCTCAATGGACACCCCCAGCCCAGACCCGTTGCCTTCGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589521.1
CDS-3UTR CAA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGATGGCCTCCGGGTGCTaGCGCTTCGCATGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKMASGC*RFAWRR
Trigger: CCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCAT...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 90 bp AAAGGCGAAGGCAACGGGTCTGGGCTGGGGGTGTCCATTGAGCAGTaGGGGGCTTGGGTCTGGGCACTGGAGCCAGCTCATTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: KGEGNGSGLGVSIEQ*GAWVWALEPAHLHV
Trigger: GACATGCAAATGAGCTGGCTCCAGTGCCCAGACCCAAGCCCCCCACTGCTCAATGGACACCCCCAGCCCAGACCCGTTGCCTTCGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301073.4
CDS-3UTR CAA 90 bp AGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGCCGGCATGGATGTaGCAGTGCCGCCGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RQRFISTAPASKGLLVWGRPAWM*QCRRRW
Trigger: CCACCTGCGGCGGCACTGCAACATCCATGCCGGCCT...CCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGTGGCGCCGGAGCGTGTaGGCCTCTGTAAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKWRRSV*ASVKRS
Trigger: GCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCA...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp TTTAGGTCTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGTCTTGCCGCAAACCTaGCACTGGTGCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FRSPPSTCSHNGKTTGNKVLPQT*HWCGFS
Trigger: GCTGAAGCCGCACCAGTGCAAGGTTTGCGGCAAGAC...CTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp GAAGACCACCGGAAACAAGGGTGTCCCGGCCCCCTGGCTCAGGCCCAGCACCAGCTCTCTCCAAGTCTCTaGACAAAGGTGTGTTTGACA +
Preference number: 5 (lower is better)
Translates to: EDHRKQGCPGPLAQAQHQLSPSL*TKVCLT
Trigger: TGTCAAACACACCTTTGTCAAGAGACTTGGAGAGAG...CTGGTGCTGGGCCTGAGCCAGGGGGCCGGGACACCCTTGTTTCCGGTGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS-3UTR CAA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGGAGCGCTTGAAGGTCTaGCCGCAAACCTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGERLKV*PQTLHW
Trigger: CCAGTGCAAGGTTTGCGGCAAGACCTTCAAGCGCTC...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp AGCAGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGCGAGGGAGGGAGGCCTaGAGTGTCCGATTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SRQRFISTAPASKGLLVWRGREA*SVRFEE
Trigger: CTCCTCAAATCGGACACTCAAGGCCTCCCTCCCTCG...CCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp AGCAGGCAGAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGTCTTGCCGCAAACCTaGCACTGGTGCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRQRFISTAPASKGLLVWVLPQT*HWCGFS
Trigger: GCTGAAGCCGCACCAGTGCAAGGTTTGCGGCAAGAC...CCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTCTGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS-3UTR CAA 90 bp CTCCACCCTCCACCTGCTCCCACAACGGGAAGACCACCGGAAACAAGGGTGTCCAACAGTGAGATGATCTaGTATCAGCTGATAAACAGG +
Preference number: 5 (lower is better)
Translates to: LHPPPAPTTGRPPETRVSNSEMI*YQLINR
Trigger: CCTGTTTATCAGCTGATACAAGATCATCTCACTGTT...GGACACCCTTGTTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS-3UTR CAA 90 bp GAGATTTATTTCCACAGCCCCTGCCTCCAAGGGTCTGTTAGTCTGGGGGAGGGGTTGACAAAGGTGTGTTaGACATTCATCCAGATACAC +
Preference number: 5 (lower is better)
Translates to: EIYFHSPCLQGSVSLGEGLTKVC*TFIQIH
Trigger: GTGTATCTGGATGAATGTCAAACACACCTTTGTCAA...CCCCTCCCCCAGACTAACAGACCCTTGGAGGCAGGGGCTGTGGAAATAAATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591046.1
CDS CAA 90 bp CCCATGGCCTCCGGGTGCTTGCGCTTCGCATGGCGCCGGAGCGTGTaGGCCTCTGTAAAGCGCAGCCGGCAGATGGGGCACTGGTACGGG +
Preference number: 6 (lower is better)
Translates to: PMASGCLRFAWRRSV*ASVKRSRQMGHWYG
Trigger: CCCGTACCAGTGCCCCATCTGCCGGCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS GCA 72 bp GTGCACACAGGGGTACCCCCATGGCCTCCGGGTGCTTaGGCTTCGCATGGCGCCGGAGCGTGTTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: VHTGVPPWPPGA*ASHGAGACWPL
Trigger: CAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS GCA 72 bp TCTGGTGCACACAGGGGTACCCCCATGGCCTCCGGGTaGTTGCGCTTCGCATGGCGCCGGAGCGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SGAHRGTPMASG*LRFAWRRSVLA
Trigger: GGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 72 bp GATCAGGAGGAGGTCGCTCCCGCCACTGCTGCCTACTaGGGCTGTCACCCCCTGCACCTGCACCAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: DQEEVAPATAAY*GCHPLHLHQWG
Trigger: CCCCCACTGGTGCAGGTGCAGGGGGTGACAGCCCCAGTAGGCAGCAGTGGCGGGAGCGACCTCCTCCTGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301073.4
ENST00000589521.1
ENST00000591046.1
CDS CCA 72 bp GCCCTCCTCGTCCCACGGCGGTTCAGACCCTGGATCTaGTGCACACAGGGGTACCCCCATGGCCTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: ALLVPRRFRPWI*CTQGYPHGLRV
Trigger: CACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CAA 72 bp GGTGCACACAGGGGTACCCCCATGGCCTCCGGGTGCTaGCGCTTCGCATGGCGCCGGAGCGTGTTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GAHRGTPMASGC*RFAWRRSVLAS
Trigger: AGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 72 bp GGTACCCCCATGGCCTCCGGGTGCTTGCGCTTCGCATaGCGCCGGAGCGTGTTGGCCTCTGTAAAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: GTPMASGCLRFA*RRSVLASVKRS
Trigger: GCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 72 bp CAGACCCTGGATCTGGTGCACACAGGGGTACCCCCATaGCCTCCGGGTGCTTGCGCTTCGCATGGCGCCGGA +
Preference number: 6 (lower is better)
Translates to: QTLDLVHTGVPP*PPGACASHGAG
Trigger: TCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CCA 72 bp CGGGATGCCCTCCTCGTCCCACGGCGGTTCAGACCCTaGATCTGGTGCACACAGGGGTACCCCCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: RDALLVPRRFRP*IWCTQGYPHGL
Trigger: GAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAGGGCATCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CAA 72 bp TCCGGGTGCTTGCGCTTCGCATGGCGCCGGAGCGTGTaGGCCTCTGTAAAGCGCAGCCGGCAGATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SGCLRFAWRRSV*ASVKRSRQMGH
Trigger: GTGCCCCATCTGCCGGCTGCGCTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CAA 90 bp CCTGGATCTGGTGCACACAGGGGTACCCCCATGGCCTCCGGGTGCTaGCGCTTCGCATGGCGCCGGAGCGTGTTGGCCTCTGTAAAGCGC +
Preference number: 6 (lower is better)
Translates to: PGSGAHRGTPMASGC*RFAWRRSVLASVKR
Trigger: GCGCTTTACAGAGGCCAACACGCTCCGGCGCCATGCGAAGCGCAAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS GCA 72 bp CTCCTCGTCCCACGGCGGTTCAGACCCTGGATCTGGTaGACACAGGGGTACCCCCATGGCCTCCGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LLVPRRFRPWIW*TQGYPHGLRVL
Trigger: AAGCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATCCAGGGTCTGAACCGCCGTGGGACGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301073.4
ENST00000591046.1
CDS CAA 72 bp CCATCCCTCTCTCCAAGTCTCTTGACAAAGGTGTGTTaGACATTCATCCAGATACACAATTTTAGCTATGCT +
Preference number: 6 (lower is better)
Translates to: PSLSPSLLTKVC*TFIQIHNFSYA
Trigger: AGCATAGCTAAAATTGTGTATCTGGATGAATGTCAAACACACCTTTGTCAAGAGACTTGGAGAGAGGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591046.1