RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF521 (Homo sapiens)

Ensembl gene IDs: ENSG00000198795

Ensembl transcript IDs: ENST00000361524.8, ENST00000399425.6, ENST00000538137.6, ENST00000577461.1, ENST00000577720.1, ENST00000577775.1, ENST00000577801.5, ENST00000579111.5, ENST00000580488.1, ENST00000581869.1, ENST00000582584.1, ENST00000583005.5, ENST00000583398.1, ENST00000584787.5

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAAGCAGACTGGACACTTaGAGGTGCCTCCCATCCCTT +
Preference number: 2 (lower is better)
Translates to: ALTAVLGHCMILQLCLEESRLDT*RCLPSL
Trigger: AAGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCT...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR GCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTATCCCTTCGAAGCTGTaGTCTATCAGGTGGCACTGG +
Preference number: 2 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAAIPSKL*SIRWHW
Trigger: CCAGTGCCACCTGATAGAGCACAGCTTCGAAGGGAT...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAGGTGGCACTGGAGTTTaGCAGGAGAGTCAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: ALTAVLGHCMILQLCLEEGGTGV*QESQRS
Trigger: AGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACC...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTCTATCAGGTGGCACTaGAGTTTGGCAGGAGAGTCA +
Preference number: 2 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSIRWH*SLAGES
Trigger: TGACTCTCCTGCCAAACTCCAGTGCCACCTGATAGA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTTACTGTAAAGCAGACTaGACACTTGAAGGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAAYCKAD*TLEGAS
Trigger: GGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTA...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR GCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: VCLNKYCKADWTLEGASHSGCRV*IHGSVL
Trigger: AAGGACTGAACCATGAATGCAAACTCTGCAGCCAGA...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR GCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATAGTCAAAGGTCTGGCTaGAGAGTTTGCATTCATGGT +
Preference number: 2 (lower is better)
Translates to: VCLNKYCKADWTLEGASHSQRSG*RVCIHG
Trigger: ACCATGAATGCAAACTCTGCAGCCAGACCTTTGACT...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGGAGAGTCAAAGGTCTaGCTGCAGAGTTTGCATTCA +
Preference number: 2 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVGESKV*LQSLHS
Trigger: TGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACAT +
Preference number: 2 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNKGSIR*AKVQTH
Trigger: ATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTT...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR-3UTR GCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTGTACTTGCACTAACTaGTGTGTTGGGTCATTGTAT +
Preference number: 2 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQCTCTN*CVGSLY
Trigger: ATACAATGACCCAACACAGCAGTTAGTGCAAGTACA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACAT +
Preference number: 2 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTKGSIR*AKVQTH
Trigger: ATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 2 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 2 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR CAA 90 bp GTCTACATAACAACTATTGCATATATAGTGATGCTACCTGTCACATaGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VYITTIAYIVMLPVT*QGLQIYIYGPYPAV
Trigger: CACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCACTATATATGCAATAGTTGTTATGTAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
3UTR-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 2 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGCAACTTGTTTGCTTaGACAAATACTGTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSICNLFA*TNTVKQ
Trigger: CTGCTTTACAGTATTTGTTCAAGCAAACAAGTTGCA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAGGTGGCACTGGAGTTaGGCAGGAGAGTCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMRWHWS*AGESKV
Trigger: GACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTGCTGTGTTGGGTCATaGTATGATTCTGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQCCVGS*YDSAAL
Trigger: CAGAGCTGCAGAATCATACAATGACCCAACACAGCA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR TCA 72 bp CATGTTCCCTTTTTGTGCCACAAAATCAATTCTCCTTaGGAGACTGTACTTGCACTAACTGCTGTGTTGGGT +
Preference number: 3 (lower is better)
Translates to: HVPFLCHKINSP*ETVLALTAVLG
Trigger: ACCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR GCA 72 bp AATCAATTCTCCTTGAGAGACTGTACTTGCACTAACTaGTGTGTTGGGTCATTGTATGATTCTGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: NQFSLRDCTCTN*CVGSLYDSAAL
Trigger: CAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAAGGAGAATTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
3UTR GCA 72 bp CATGTGCAACACTTTATATACAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACATGAACATCCAACAGTT +
Preference number: 3 (lower is better)
Translates to: HVQHFIYKGSIR*AKVQTHEHPTV
Trigger: AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR CCA 72 bp AGTAACATACAGGTTAGTTCAACTGATTCAAGAATTTaGCTGCGTGAAATCATTAAGGAAAACCTTGAACAC +
Preference number: 3 (lower is better)
Translates to: SNIQVSSTDSRI*LREIIKENLEH
Trigger: GTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTAGGTATAGCCCACCGTaGCCAGGGAAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGRYSPP*PGKGCC
Trigger: GCAACAGCCCTTCCCTGGTCACGGTGGGCTATACCT...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCCCGCCCTGTGGTCTaGACTGCAGACCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPRPVV*TADPFP
Trigger: AGGGAATGGGTCTGCAGTTCAGACCACAGGGCGGGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTCCAAAGCCATCAGGATaGCTCCAGAGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESPKPSG*LQRGPL
Trigger: TAGGGGCCCCCTCTGGAGCCATCCTGATGGCTTTGG...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTATGTCAGGGGTTTGTTaGGCGGCCCTCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESMSGVC*AALFLP
Trigger: AGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACAT...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCCCCGCCCTGTGGTCTaGACTGCAGACCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNPRPVV*TADPFP
Trigger: AGGGAATGGGTCTGCAGTTCAGACCACAGGGCGGGG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGGCTGGCGCTCTTACTaGGATTCACGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMGWRSY*DSRSRH
Trigger: GTGCCGGCTGCGTGAATCTCAGTAAGAGCGCCAGCC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGGCTGGCGCTCTTACTaGGATTCACGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNGWRSY*DSRSRH
Trigger: GTGCCGGCTGCGTGAATCTCAGTAAGAGCGCCAGCC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGCAGCTCCACCTCGGTaGCAAAGGACTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVAAPPR*QRTHRR
Trigger: TCTGCGGTGAGTCCTTTGGCACCGAGGTGGAGCTGC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCTCCCTCGACTCTTTaGGATTGGCGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPPSTL*DWRGSF
Trigger: GAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGGGACGTTAATGCCTaGGCTGGCGCTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: ALSSCGVLFCENISSWFARDVNA*AGALTE
Trigger: CTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCT...TGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTGGCTGCGCTTGTGTTTaGACAGCCTACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESGCACV*TAYCSR
Trigger: CCTACTGCAGTAGGCTGTTCAAACACAAGCGCAGCC...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTATCCTGGAACCGGACTaGGAGCCGTCCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAAILEPD*EPSLFL
Trigger: GAGGAACAAGGACGGCTCTCAGTCCGGTTCCAGGAT...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCGAAGGGCTGTTGCTGTaGTTGCATGACTCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARIEGLLL*LHDSGC
Trigger: GCAACCGGAGTCATGCAATCACAGCAACAGCCCTTC...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGATGTCAGGGGTTTGTTaGGCGGCCCTCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQMSGVC*AALFLP
Trigger: AGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACAT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTCTTCGCTCCCATCGTaGCTGTTGTGGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQSSLPS*LLWDSW
Trigger: CCAGGAGTCCCACAACAGTCACGATGGGAGCGAAGA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTACGTCCCATGGATTTTaGGTTCCAAGGTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGTSHGF*VPRWRS
Trigger: TGACCTCCACCTTGGAACTCAAAATCCATGGGACGT...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCAGCAGACTGGACACTTaGAGGTGCCTCCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARISRLDT*RCLPSL
Trigger: AAGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCT...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTGCAAGGTCTTGGACTaGGCTGTCGCTCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFCKVLD*AVAPVV
Trigger: GACTACCGGAGCGACAGCGCAGTCCAAGACCTTGCA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTAGTGGGACGTGCAGGTaGACCTCCTACTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFSGTCR*TSYCLH
Trigger: ATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACT...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGGGCCTAGGTGGGTCTaGATATGTTCCCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNGPRWV*ICSRRP
Trigger: TGGCCTCCGGGAACATATGCAGACCCACCTAGGCCC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGTGGAGGTCACTGTCTaGATGCACACCACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVVEVTV*MHTTQR
Trigger: TCGCTGCGTGGTGTGCATGCAGACAGTGACCTCCAC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACATCCTGCAAGGTCTTaGACTGCGCTGTCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTHPARS*TALSLR
Trigger: CCGGAGCGACAGCGCAGTCCAAGACCTTGCAGGATG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CCA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGATCCAGTCCTCCATCCTaGAACCGGACTGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSSCGVLFCENISSWFARSSPPS*NRTESR
Trigger: ACGGCTCTCAGTCCGGTTCCAGGATGGAGGACTGGA...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACACCTCCCTCGACTCTTTaGGATTGGCGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTPPSTL*DWRGSF
Trigger: GAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGG...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTGGGAGTCCCAAGCACTaGAGACCCAAATCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSGSPKH*RPKSGA
Trigger: GGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCC...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGGGTCTGCAAGGTCTTaGACTGCGCTGTCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKGSARS*TALSLR
Trigger: CCGGAGCGACAGCGCAGTCCAAGACCTTGCAGACCC...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAATCCTGGAACCGGACTaGGAGCCGTCCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTILEPD*EPSLFL
Trigger: GAGGAACAAGGACGGCTCTCAGTCCGGTTCCAGGAT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGCTCCATGTGGTTCATaGGGGAGGTCTCCTCTACGA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQAPCGS*GRSPLR
Trigger: TCGTAGAGGAGACCTCCCTCATGAACCACATGGAGC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGACTCCGGTTGCTGGTaGCTGTCCATGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMDSGCW*LSMWLY
Trigger: GTACAGCCACATGGACAGTCACCAGCAACCGGAGTC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGAAGGGCTGTTGCTGTaGTTGCATGACTCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQEGLLL*LHDSGC
Trigger: GCAACCGGAGTCATGCAATCACAGCAACAGCCCTTC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGAGGTATAGCCCACCGTaGCCAGGGAAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLRYSPP*PGKGCC
Trigger: GCAACAGCCCTTCCCTGGTCACGGTGGGCTATACCT...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACAGGTATAGCCCACCGTaGCCAGGGAAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNRYSPP*PGKGCC
Trigger: GCAACAGCCCTTCCCTGGTCACGGTGGGCTATACCT...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCGACTGGGAGGGACTaGTTCTGGGCATTGGTGATA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPTGRD*FWALVI
Trigger: TATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTCCGACTGGGAGGGACTaGTTCTGGGCATTGGTGATA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVPTGRD*FWALVI
Trigger: TATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGG...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTAGCAGACTGGACACTTaGAGGTGCCTCCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVSRLDT*RCLPSL
Trigger: AAGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATGCAAGGTCTTGGACTaGGCTGTCGCTCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQCKVLD*AVAPVV
Trigger: GACTACCGGAGCGACAGCGCAGTCCAAGACCTTGCA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATCTCGGTTTCGCTTaGTTGCGGCGAGACATCCTG +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFDLGFA*LRRDIL
Trigger: CAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATC...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCCCCGCTATGCACCTaGTCCATGTGGTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVSPLCT*SMWFMR
Trigger: CCTCATGAACCACATGGAGCAGGTGCATAGCGGGGA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCGGCTGTTGCTGTGATTaGATGACTCCGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARIGCCCD*MTPVAG
Trigger: ACCAGCAACCGGAGTCATGCAATCACAGCAACAGCC...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCCAGGGAAGGGCTGTTaGTGTGATTGCATGACTCCG +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFPGKGC*CDCMTP
Trigger: CGGAGTCATGCAATCACAGCAACAGCCCTTCCCTGG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAGTGGGACGTGCAGGTaGACCTCCTACTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSGTCR*TSYCLH
Trigger: ATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAGTGGGACGTGCAGGTaGACCTCCTACTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSGTCR*TSYCLH
Trigger: ATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTTCTCCAGTGGGACGTaGAGGTGCACCTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMFSSGT*RCTSYC
Trigger: GCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATTCTCCAGTGGGACGTaGAGGTGCACCTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQFSSGT*RCTSYC
Trigger: GCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGCAGCTCCACCTCGGTaGCAAAGGACTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQAAPPR*QRTHRR
Trigger: TCTGCGGTGAGTCCTTTGGCACCGAGGTGGAGCTGC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGCAGCTCCACCTCGGTaGCAAAGGACTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKAAPPR*QRTHRR
Trigger: TCTGCGGTGAGTCCTTTGGCACCGAGGTGGAGCTGC...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGGGCCTAGGTGGGTCTaGATATGTTCCCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRGPRWV*ICSRRP
Trigger: TGGCCTCCGGGAACATATGCAGACCCACCTAGGCCC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACCAAAGCCATCAGGATaGCTCCAGAGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQPKPSG*LQRGPL
Trigger: TAGGGGCCCCCTCTGGAGCCATCCTGATGGCTTTGG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000584787.5
CDS-3UTR CCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCATCCTGCAAGGTCTTaGACTGCGCTGTCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNHPARS*TALSLR
Trigger: CCGGAGCGACAGCGCAGTCCAAGACCTTGCAGGATG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCCAGTCCTCCATCCTaGAACCGGACTGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSSPPS*NRTESR
Trigger: ACGGCTCTCAGTCCGGTTCCAGGATGGAGGACTGGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTCCAGTCCTCCATCCTaGAACCGGACTGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSSPPS*NRTESR
Trigger: ACGGCTCTCAGTCCGGTTCCAGGATGGAGGACTGGA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCGCTCGGTCCTCATTTaGGGAGCATTCGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNRSVLI*GAFGVA
Trigger: TGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTGCACCTGCTCCATGTaGTTCATGAGGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFCTCSM*FMREVS
Trigger: GGAGACCTCCCTCATGAACCACATGGAGCAGGTGCA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGGGCAGCTTCCACCATaGTTGAGCTGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQGQLPP*LSCPLR
Trigger: TCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTCGACTCTTTGGGATTaGCGGGGCAGCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQSTLWD*RGSFHH
Trigger: ATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCCTCCCTCGACTCTTTaGGATTGGCGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRPPSTL*DWRGSF
Trigger: GAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGGGAGTCCCAAGCACTaGAGACCCAAATCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVGSPKH*RPKSGA
Trigger: GGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGAGATGTCTGCTCTATaGCCACAGGAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVEMSAL*PQEIGG
Trigger: GCCCCCTATCTCCTGTGGCCATAGAGCAGACATCTC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTTGACAGGGCCTAGGTaGGTCTGCATATGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFLTGPR*VCICSR
Trigger: CCGGGAACATATGCAGACCCACCTAGGCCCTGTCAA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAATTGACAGGGCCTAGGTaGGTCTGCATATGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEELTGPR*VCICSR
Trigger: CCGGGAACATATGCAGACCCACCTAGGCCCTGTCAA...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGTGCTGTTGCTGTCTaGCACGAGCTCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVCAVAV*HELSVD
Trigger: ATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTGTGCTGTTGCTGTCTaGCACGAGCTCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQCAVAV*HELSVD
Trigger: ATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATTGGCTAGGGGAAGTCTaGTCCTTGCTAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VCLNKYCKADWTLEGASHWLGEV*SLLEGE
Trigger: CTCACCTTCTAGCAAGGATCAGACTTCCCCTAGCCA...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGATCCTGGAACCGGACTaGGAGCCGTCCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRILEPD*EPSLFL
Trigger: GAGGAACAAGGACGGCTCTCAGTCCGGTTCCAGGAT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGGACTCCGGTTGCTGGTaGCTGTCCATGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQDSGCW*LSMWLY
Trigger: GTACAGCCACATGGACAGTCACCAGCAACCGGAGTC...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGACTCCGGTTGCTGGTaGCTGTCCATGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVDSGCW*LSMWLY
Trigger: GTACAGCCACATGGACAGTCACCAGCAACCGGAGTC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGATGTCAGGGGTTTGTTaGGCGGCCCTCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVMSGVC*AALFLP
Trigger: AGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACAT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTCATCGGATGTGTTCCTaGAGAGTGTTGAGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESHRMCS*RVLRSL
Trigger: CAACGACCTCAACACTCTTCAGGAACACATCCGATG...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTCAAATCGGGAGCCACTaGGGTCACAATGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVQIGSH*GHNEPV
Trigger: GACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTG...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTCTTCGCTCCCATCGTaGCTGTTGTGGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVSSLPS*LLWDSW
Trigger: CCAGGAGTCCCACAACAGTCACGATGGGAGCGAAGA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTGGTCTCGGAGCTGGTaGTTCTGCAGCAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRWSRSW*FCSKVS
Trigger: GGAAACTTTGCTGCAGAATCACCAGCTCCGAGACCA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCACTTTCTCCAGGTCTaGTGTTGTGGTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFHFLQV*CCGLGA
Trigger: AGCTCCGAGACCACAACATCAGACCTGGAGAAAGTG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGCCCCGCCCTGTGGTCTaGACTGCAGACCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRPRPVV*TADPFP
Trigger: AGGGAATGGGTCTGCAGTTCAGACCACAGGGCGGGG...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCCGACTGGGAGGGACTaGTTCTGGGCATTGGTGATA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNPTGRD*FWALVI
Trigger: TATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAGCAGACTGGACACTTaGAGGTGCCTCCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSRLDT*RCLPSL
Trigger: AAGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCGGTTTCGCTTGCTTaGGGCGAGACATCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSVSLA*GETSCK
Trigger: CTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCCCCGCTATGCACCTaGTCCATGTGGTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSPLCT*SMWFMR
Trigger: CCTCATGAACCACATGGAGCAGGTGCATAGCGGGGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGGCTGTTGCTGTGATTaGATGACTCCGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFGCCCD*MTPVAG
Trigger: ACCAGCAACCGGAGTCATGCAATCACAGCAACAGCC...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAACCAGGGAAGGGCTGTTaGTGTGATTGCATGACTCCG +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQPGKGC*CDCMTP
Trigger: CGGAGTCATGCAATCACAGCAACAGCCCTTCCCTGG...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATGGGCCTAGGTGGGTCTaGATATGTTCCCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYGPRWV*ICSRRP
Trigger: TGGCCTCCGGGAACATATGCAGACCCACCTAGGCCC...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGTGGAGGTCACTGTCTaGATGCACACCACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVVEVTV*MHTTQR
Trigger: TCGCTGCGTGGTGTGCATGCAGACAGTGACCTCCAC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGTGGAGGTCACTGTCTaGATGCACACCACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRVEVTV*MHTTQR
Trigger: TCGCTGCGTGGTGTGCATGCAGACAGTGACCTCCAC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCCTGTGGTCTGAACTaGAGACCCATTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPCGLN*RPIPCL
Trigger: AAGACAGGGAATGGGTCTGCAGTTCAGACCACAGGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTACAGTTTTTGGACGTaGTGGCCCCGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNYSFWT*WPRPVV
Trigger: GACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTACAGTTTTTGGACGTaGTGGCCCCGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVYSFWT*WPRPVV
Trigger: GACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCGCGTTTTCAACTGTGTaGTGTTGCTGTCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARIAFSTV*CCCLAR
Trigger: TCGTGCCAGACAGCAACAGCACACAGTTGAAAACGC...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp GGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGATCCCTTCGAAGCTGTaGTCTATCAGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLQIYIYGPYPAVGFCSVIPSKL*SIRWHW
Trigger: CCAGTGCCACCTGATAGAGCACAGCTTCGAAGGGAT...CACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGAATTGACACGGGTATaGAAGCCCAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTELTRV*KPRATF
Trigger: GAAGGTGGCCCTGGGCTTCCATACCCGTGTCAATTC...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAGTGTGGAGTTTTATGTaGCGATCTCGGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LSSCGVLFCENISSWFARVWSFM*RSRLRL
Trigger: CAAGCGCAGCCGAGATCGCCACATAAAACTCCACAC...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAGGGGAGCATTCGGGGTaGCACTCTGCAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSSCGVLFCENISSWFARGEHSG*HSAMCF
Trigger: AAAACACATTGCAGAGTGCCACCCCGAATGCTCCCC...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACGCTCGGTCCTCATTTaGGGAGCATTCGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIRSVLI*GAFGVA
Trigger: TGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATGCACCTGCTCCATGTaGTTCATGAGGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTCTCSM*FMREVS
Trigger: GGAGACCTCCCTCATGAACCACATGGAGCAGGTGCA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTTGTCCACTGAGAGGTTaGAATCTGGAGTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESCPLRG*NLESYW
Trigger: CCAGTACGACTCCAGATTCCAACCTCTCAGTGGACA...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCGACTCTTTGGGATTaGCGGGGCAGCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSTLWD*RGSFHH
Trigger: ATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTGAGATGTCTGCTCTATaGCCACAGGAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSEMSAL*PQEIGG
Trigger: GCCCCCTATCTCCTGTGGCCATAGAGCAGACATCTC...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGAGATGTCTGCTCTATaGCCACAGGAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMEMSAL*PQEIGG
Trigger: GCCCCCTATCTCCTGTGGCCATAGAGCAGACATCTC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTTGACAGGGCCTAGGTaGGTCTGCATATGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNLTGPR*VCICSR
Trigger: CCGGGAACATATGCAGACCCACCTAGGCCCTGTCAA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCGGTGGCACTGGAGTTTaGCAGGAGAGTCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRGGTGV*QESQRS
Trigger: AGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACC...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCATATCCTCATCCGACTaGGAGGGACTGATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRISSSD*EGLILG
Trigger: GCCCAGAATCAGTCCCTCCCAGTCGGATGAGGATAT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATTACAGTTGGGGTCTTTaGGGGATCTCGGTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: VCLNKYCKADWTLEGASHYSWGL*GISVSL
Trigger: AAGCGAAACCGAGATCCCTCAAAGACCCCAACTGTA...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTGGCTAGGGGAAGTCTaGTCCTTGCTAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMWLGEV*SLLEGE
Trigger: CTCACCTTCTAGCAAGGATCAGACTTCCCCTAGCCA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGGCAGTTTGTCACTGTaGCTCTGCTCATGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQGSLSL*LCSWCF
Trigger: AAAGCACCATGAGCAGAGTCACAGTGACAAACTGCC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAGGCAGTTTGTCACTGTaGCTCTGCTCATGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEEGSLSL*LCSWCF
Trigger: AAAGCACCATGAGCAGAGTCACAGTGACAAACTGCC...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATGGCTGCGCTTGTGTTTaGACAGCCTACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNGCACV*TAYCSR
Trigger: CCTACTGCAGTAGGCTGTTCAAACACAAGCGCAGCC...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGGCTGCGCTTGTGTTTaGACAGCCTACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQGCACV*TAYCSR
Trigger: CCTACTGCAGTAGGCTGTTCAAACACAAGCGCAGCC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTTCCTTGTTCCTCTCATaGACCTGCATGTGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAASLFLS*TCMCPC
Trigger: ACACGGACACATGCAGGTTCATGAGAGGAACAAGGA...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTCCTTGTTCCTCTCATaGACCTGCATGTGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQSLFLS*TCMCPC
Trigger: ACACGGACACATGCAGGTTCATGAGAGGAACAAGGA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGCTCCATGTGGTTCATaGGGGAGGTCTCCTCTACGA +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNAPCGS*GRSPLR
Trigger: TCGTAGAGGAGACCTCCCTCATGAACCACATGGAGC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGCTGTGATTGCATaGCTCCGGTTGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTVAVIA*LRLLVT
Trigger: AGTCACCAGCAACCGGAGTCATGCAATCACAGCAAC...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGGAAGGGCTGTTGCTGTaGTTGCATGACTCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLEGLLL*LHDSGC
Trigger: GCAACCGGAGTCATGCAATCACAGCAACAGCCCTTC...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGATCAGACCTGGGTCCTaGGCTTCATGCACTTGCTTA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQIRPGS*ASCTCL
Trigger: TAAGCAAGTGCATGAAGCTCAGGACCCAGGTCTGAT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTATCAGACCTGGGTCCTaGGCTTCATGCACTTGCTTA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVIRPGS*ASCTCL
Trigger: TAAGCAAGTGCATGAAGCTCAGGACCCAGGTCTGAT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAGGTCATCCACTGATGTaGATTGCTTGTCACAACTCT +
Preference number: 4 (lower is better)
Translates to: ALSSCGVLFCENISSWFAGHPLM*IACHNS
Trigger: AGAGTTGTGACAAGCAATTCACATCAGTGGATGACC...TGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTCTTACTGTGAGTGGTaGTGTGGCATTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSYCEW*CGIAAP
Trigger: TGGAGCTGCAATGCCACATCACCACTCACAGTAAGA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGTCTCGGAGCTGGTaGTTCTGCAGCAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTWSRSW*FCSKVS
Trigger: GGAAACTTTGCTGCAGAATCACCAGCTCCGAGACCA...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCATGTTGGGTCATTGTATaGTTCTGCAGCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALSSCGVLFCENISSWFACWVIV*FCSSVW
Trigger: CCAAACAGAGCTGCAGAATCATACAATGACCCAACA...TGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATCAGTAGTGTTGGCATaGGCGCTGGTCTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTSVVLA*ALVSSV
Trigger: GACTGAAGAGACCAGCGCTCATGCCAACACTACTGA...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCCCCGCTATGCACCTaGTCCATGTGGTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSSPLCT*SMWFMR
Trigger: CCTCATGAACCACATGGAGCAGGTGCATAGCGGGGA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTATCTTAAGAGATGTCTaGTCTATGGCCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGILRDV*SMATGD
Trigger: ATCTCCTGTGGCCATAGAGCAGACATCTCTTAAGAT...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACATTCTCCAGTGGGACGTaGAGGTGCACCTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTFSSGT*RCTSYC
Trigger: GCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAA...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACACTTCCTGGCAGAGGGTaGAGCGAAAGAAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTLPGRG*SERRQR
Trigger: CCTTTGTCTTCTTTCGCTGCACCCTCTGCCAGGAAG...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATTCCATAGTGTAGGCTaGCCCACAAATGTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTFHSVG*PTNVAA
Trigger: GGCTGCGACATTTGTGGGGCAGCCTACACTATGGAA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTTCCATAGTGTAGGCTaGCCCACAAATGTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNFHSVG*PTNVAA
Trigger: GGCTGCGACATTTGTGGGGCAGCCTACACTATGGAA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGCCCTGTGGTCTGAACTaGAGACCCATTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMPCGLN*RPIPCL
Trigger: AAGACAGGGAATGGGTCTGCAGTTCAGACCACAGGG...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGCGTTTTCAACTGTGTaGTGTTGCTGTCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQAFSTV*CCCLAR
Trigger: TCGTGCCAGACAGCAACAGCACACAGTTGAAAACGC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAATCCCTTCGAAGCTGTaGTCTATCAGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTIPSKL*SIRWHW
Trigger: CCAGTGCCACCTGATAGAGCACAGCTTCGAAGGGAT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGAATTGACACGGGTATaGAAGCCCAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQELTRV*KPRATF
Trigger: GAAGGTGGCCCTGGGCTTCCATACCCGTGTCAATTC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTGTGGAGTTTTATGTaGCGATCTCGGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTVWSFM*RSRLRL
Trigger: CAAGCGCAGCCGAGATCGCCACATAAAACTCCACAC...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTCACATTCACTGCAGTaGTACTTCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSHSLQ*YFLSPV
Trigger: CACCGGGGACAAGAAGTACCACTGCAGTGAATGTGA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAAATCTGGAGTCGTACTaGACACGGAGGTATAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEENLESY*TRRYSP
Trigger: TGGGCTATACCTCCGTGTCCAGTACGACTCCAGATT...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGGGCAGCTTCCACCATaGTTGAGCTGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNGQLPP*LSCPLR
Trigger: TCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATCGACTCTTTGGGATTaGCGGGGCAGCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQSTLWD*RGSFHH
Trigger: ATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTCTACTACTGGTTCTTTaGGAGTCCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVLLLVL*ESQALE
Trigger: CTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAG...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATAGATATATTCTCCAGTaGGACGTGCAGGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: VCLNKYCKADWTLEGASHRYILQ*DVQVHL
Trigger: GAGGTGCACCTGCACGTCCCACTGGAGAATATATCT...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp GCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGGACAGGTCAATTTTaGAAGCACAGTGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: ALSSCGVLFCENISSWFARTGQF*KHSVEM
Trigger: CATCTCGACACTGTGCTTCCAAAATTGACCTGTCCT...TGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCGAGTCAAAAACTTCCTaGCAGAGGGTGCAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRESKTS*QRVQRK
Trigger: CTTTCGCTGCACCCTCTGCCAGGAAGTTTTTGACTC...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAGAGTCAAAAACTTCCTaGCAGAGGGTGCAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEEESKTS*QRVQRK
Trigger: CTTTCGCTGCACCCTCTGCCAGGAAGTTTTTGACTC...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTATGCACTTTCCCTTaGTTTTCCAGGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGLCTFP*FSRWLC
Trigger: ACACAACCACCTGGAAAACCAAGGGAAAGTGCATAA...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTGTTGTGGGACTCCTaGCTGTTGGTCAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSLLWDS*LLVSKV
Trigger: GACTTTGCTGACCAACAGCCAGGAGTCCCACAACAG...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACACTTATACAGTTTTTaGACGTGCTGGCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTHLYSF*TCWPRP
Trigger: AGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGGCACGAGCTCTCGGTaGATGGTTTGGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRGTSSR*MVWMWF
Trigger: GAACCACATCCAAACCATCCACCGAGAGCTCGTGCC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGGCACGAGCTCTCGGTaGATGGTTTGGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQGTSSR*MVWMWF
Trigger: GAACCACATCCAAACCATCCACCGAGAGCTCGTGCC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTTCTTCTCATCCGACTaGGAGGGACTGATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NIYIRALSSCGVLFCENIFFSSD*EGLILG
Trigger: GCCCAGAATCAGTCCCTCCCAGTCGGATGAGAAGAA...GATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTTCTTCTCATCCGACTaGGAGGGACTGATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMFFSSD*EGLILG
Trigger: GCCCAGAATCAGTCCCTCCCAGTCGGATGAGAAGAA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGGTGGCACTGGAGTTTaGCAGGAGAGTCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMGGTGV*QESQRS
Trigger: AGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTTACTGTAAAGCAGACTaGACACTTGAAGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESYCKAD*TLEGAS
Trigger: GGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTA...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTACAGTTGGGGTCTTTaGGGGATCTCGGTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNYSWGL*GISVSL
Trigger: AAGCGAAACCGAGATCCCTCAAAGACCCCAACTGTA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAGACTTGTCACAGAATTaGCACGGGTATGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTDLSQN*HGYGSP
Trigger: TGGGCTTCCATACCCGTGTCAATTCTGTGACAAGTC...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCGGCTTGTTGGACGTGTaGGTCTTTAAGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRGLLDV*VFKWIF
Trigger: GAAGATCCACTTAAAGACTCACACGTCCAACAAGCC...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTGGCTTGTTGGACGTGTaGGTCTTTAAGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAAGLLDV*VFKWIF
Trigger: GAAGATCCACTTAAAGACTCACACGTCCAACAAGCC...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTCCTTGTTCCTCTCATaGACCTGCATGTGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSLFLS*TCMCPC
Trigger: ACACGGACACATGCAGGTTCATGAGAGGAACAAGGA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAGCTCCATGTGGTTCATaGGGGAGGTCTCCTCTACGA +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTAPCGS*GRSPLR
Trigger: TCGTAGAGGAGACCTCCCTCATGAACCACATGGAGC...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTGCTGTGATTGCATaGCTCCGGTTGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKVAVIA*LRLLVT
Trigger: AGTCACCAGCAACCGGAGTCATGCAATCACAGCAAC...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAATCAGACCTGGGTCCTaGGCTTCATGCACTTGCTTA +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTIRPGS*ASCTCL
Trigger: TAAGCAAGTGCATGAAGCTCAGGACCCAGGTCTGAT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGCATCGGATGTGTTCCTaGAGAGTGTTGAGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMHRMCS*RVLRSL
Trigger: CAACGACCTCAACACTCTTCAGGAACACATCCGATG...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGGGTTTGCAAATCCATaGGAACATCGGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVGFANP*EHRMCS
Trigger: GGAACACATCCGATGTTCTCATGGATTTGCAAACCC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTCAAATCGGGAGCCACTaGGGTCACAATGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSQIGSH*GHNEPV
Trigger: GACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTG...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACAAATCGGGAGCCACTaGGGTCACAATGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQQIGSH*GHNEPV
Trigger: GACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTACAGCCAAGTGGAGCTaGATGGAGACTTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFTAKWS*METFES
Trigger: TGACTCAAAAGTCTCCATTCAGCTCCACTTGGCTGT...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTGGTCTCGGAGCTGGTaGTTCTGCAGCAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNWSRSW*FCSKVS
Trigger: GGAAACTTTGCTGCAGAATCACCAGCTCCGAGACCA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCACTTTCTCCAGGTCTaGTGTTGTGGTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQHFLQV*CCGLGA
Trigger: AGCTCCGAGACCACAACATCAGACCTGGAGAAAGTG...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCACTTTCTCCAGGTCTaGTGTTGTGGTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNHFLQV*CCGLGA
Trigger: AGCTCCGAGACCACAACATCAGACCTGGAGAAAGTG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AGAGACTGTACTTGCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RDCTCTNCCVGSLYDSAADSGHW*YLGRFQ
Trigger: TTGAAAACGCCCCAAGTATCACCAATGCCCAGAATC...AGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGCAAGTACAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAGATCTCGGTTTCGCTTaGTTGCGGCGAGACATCCTG +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIDLGFA*LRRDIL
Trigger: CAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATC...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCTTCCTCACACTGACTaGACTTCTGAGTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFLPHTD*TSECPS
Trigger: TGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCCTTCCTCACACTGACTaGACTTCTGAGTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRLPHTD*TSECPS
Trigger: TGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAG...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGGCTGTTGCTGTGATTaGATGACTCCGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNGCCCD*MTPVAG
Trigger: ACCAGCAACCGGAGTCATGCAATCACAGCAACAGCC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAAGCACCTCCTACTGCCTaGATCATCTTAAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEEAPPTA*IILRDV
Trigger: GACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGC...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTTCCTGGCAGAGGGTaGAGCGAAAGAAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQLPGRG*SERRQR
Trigger: CCTTTGTCTTCTTTCGCTGCACCCTCTGCCAGGAAG...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTTTCTTTTCGTTACTGTaGTTCACAGCCAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESFFSLL*FTAKWS
Trigger: GCTCCACTTGGCTGTGAAGCACAGTAACGAAAAGAA...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTTCCTCTTTCTGCACTTaGTCGGAAGCTCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESSSFCT*SEAPFV
Trigger: AACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGA...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTTCCATAGTGTAGGCTaGCCCACAAATGTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVFHSVG*PTNVAA
Trigger: GGCTGCGACATTTGTGGGGCAGCCTACACTATGGAA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGCCATTCCCTGTCTTTTaGATGTGGAACGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMPFPVF*MWNVPW
Trigger: CCATGGGACGTTCCACATGCAAAAGACAGGGAATGG...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTCAACTGTGTGCTGTTaGTGTCTGGCACGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNSTVCC*CLARAL
Trigger: GAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTCAACTGTGTGCTGTTaGTGTCTGGCACGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRSTVCC*CLARAL
Trigger: GAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTATCCCTTCGAAGCTGTaGTCTATCAGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSIPSKL*SIRWHW
Trigger: CCAGTGCCACCTGATAGAGCACAGCTTCGAAGGGAT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTGTGGAGTTTTATGTaGCGATCTCGGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKVWSFM*RSRLRL
Trigger: CAAGCGCAGCCGAGATCGCCACATAAAACTCCACAC...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTTCTTGTCCCCGGTGTaGAGTTTTATGTGGCGATCT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRFLSPV*SFMWRS
Trigger: AGATCGCCACATAAAACTCCACACCGGGGACAAGAA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATCACATTCACTGCAGTaGTACTTCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTSHSLQ*YFLSPV
Trigger: CACCGGGGACAAGAAGTACCACTGCAGTGAATGTGA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGGGGAGCATTCGGGGTaGCACTCTGCAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVGEHSG*HSAMCF
Trigger: AAAACACATTGCAGAGTGCCACCCCGAATGCTCCCC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATGGGGAGCATTCGGGGTaGCACTCTGCAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNGEHSG*HSAMCF
Trigger: AAAACACATTGCAGAGTGCCACCCCGAATGCTCCCC...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGCTCGGTCCTCATTTaGGGAGCATTCGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIRSVLI*GAFGVA
Trigger: TGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATTGCACCTGCTCCATGTaGTTCATGAGGGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYCTCSM*FMREVS
Trigger: GGAGACCTCCCTCATGAACCACATGGAGCAGGTGCA...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAGGGCAGCTTCCACCATaGTTGAGCTGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIGQLPP*LSCPLR
Trigger: TCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCC...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAGAAACAATCAGACCTaGGTCCTGAGCTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRRNNQT*VLSFMH
Trigger: GTGCATGAAGCTCAGGACCCAGGTCTGATTGTTTCT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCGGGAGTCCCAAGCACTaGAGACCCAAATCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIGSPKH*RPKSGA
Trigger: GGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCC...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATCCTTGGTTTTCCAGGTaGTTGTGTTTCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: VCLNKYCKADWTLEGASHPWFSR*LCFTWS
Trigger: GCTCCATGTGAAACACAACCACCTGGAAAACCAAGG...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCACTTATACAGTTTTTaGACGTGCTGGCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRHLYSF*TCWPRP
Trigger: AGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGGCACACAGACCATATaGCAGGCCATTGATATCAAG +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQGTQTI*QAIDIK
Trigger: CTTGATATCAATGGCCTGCCATATGGTCTGTGTGCC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAAGGGACGTTAATGCCTaGGCTGGCGCTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIRDVNA*AGALTE
Trigger: CTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCT...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCTCAGATTCTCATTCTaGCCCAAGCCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQLRFSF*PKPGLF
Trigger: GAATAGACCAGGCTTGGGCCAGAATGAGAATCTGAG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGGCATTGGTGATACTTaGGGCGTTTTCAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQGIGDT*GVFNCV
Trigger: CACACAGTTGAAAACGCCCCAAGTATCACCAATGCC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGGCTTGTTGGACGTGTaGGTCTTTAAGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNGLLDV*VFKWIF
Trigger: GAAGATCCACTTAAAGACTCACACGTCCAACAAGCC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGAGAACAAATGCTGCATaGGTTCTTCTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: IARLTNIYIRALSSCGVLRTNAA*VLLLPA
Trigger: AGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCT...CAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAAGAACAAATGCTGCATaGGTTCTTCTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTRTNAA*VLLLPA
Trigger: AGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAAGAACAAATGCTGCATaGGTTCTTCTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTRTNAA*VLLLPA
Trigger: AGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCT...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTACCTCCAAGCAATACTaGCAAATATGGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVTSKQY*QIWACS
Trigger: AGAACAGGCCCATATTTGTCAGTATTGCTTGGAGGT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACATCGGATGTGTTCCTaGAGAGTGTTGAGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQHRMCS*RVLRSL
Trigger: CAACGACCTCAACACTCTTCAGGAACACATCCGATG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCCACTGAGGTCACAATaGACCTGTCTAATATGCTCT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFPLRSQ*TCLICS
Trigger: AGAGCATATTAGACAGGTTCATTGTGACCTCAGTGG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAACAGCCAAGTGGAGCTaGATGGAGACTTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTTAKWS*METFES
Trigger: TGACTCAAAAGTCTCCATTCAGCTCCACTTGGCTGT...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCTTACTGTGAGTGGTaGTGTGGCATTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSSYCEW*CGIAAP
Trigger: TGGAGCTGCAATGCCACATCACCACTCACAGTAAGA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACGTCCCATGGATTTTaGGTTCCAAGGTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNTSHGF*VPRWRS
Trigger: TGACCTCCACCTTGGAACTCAAAATCCATGGGACGT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGTCCCATGGATTTTaGGTTCCAAGGTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQTSHGF*VPRWRS
Trigger: TGACCTCCACCTTGGAACTCAAAATCCATGGGACGT...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: IARLTNIYIRALSSCGVLDSGHW*YLGRFQ
Trigger: TTGAAAACGCCCCAAGTATCACCAATGCCCAGAATC...CAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGCTGTAGGTAACTTTTaGTTGTTTACTCGAGGGACC +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVAVGNF*LFTRGT
Trigger: GGTCCCTCGAGTAAACAAGCAAAAGTTACCTACAGC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTGCACCTCCTACTGCCTaGATCATCTTAAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSAPPTA*IILRDV
Trigger: GACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGC...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTGGGGAATTCCTTGTTaGACTGAGGACAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRWGIPC*TEDRSI
Trigger: AATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACTTCCTGGCAGAGGGTaGAGCGAAAGAAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTLPGRG*SERRQR
Trigger: CCTTTGTCTTCTTTCGCTGCACCCTCTGCCAGGAAG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTCTTTTCGTTACTGTaGTTCACAGCCAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVFFSLL*FTAKWS
Trigger: GCTCCACTTGGCTGTGAAGCACAGTAACGAAAAGAA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATGTTTCACATGGAGCTaGAAGTCAGTTTCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQCFTWS*KSVSLR
Trigger: CCGCAACGAAACTGACTTGCAGCTCCATGTGAAACA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTCGCATGGAAGGCTTTaGTACAGAACTTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFSHGRL*YRTCSC
Trigger: ACAACTGCAAGTTCTGTAGCAAAGCCTTCCATGCGA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGTCTGGAGAGGCATCTTaGAAATCCGGCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQSGEAS*KSGSFQ
Trigger: CTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGA...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTCTGGAGAGGCATCTTaGAAATCCGGCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNSGEAS*KSGSFQ
Trigger: CTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACTCTGGAGAGGCATCTTaGAAATCCGGCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNSGEAS*KSGSFQ
Trigger: CTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGA...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCCATTCCCTGTCTTTTaGATGTGGAACGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNPFPVF*MWNVPW
Trigger: CCATGGGACGTTCCACATGCAAAAGACAGGGAATGG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTACAGTTTTTGGACGTaGTGGCCCCGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIYSFWT*WPRPVV
Trigger: GACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTGCGTTTTCAACTGTGTaGTGTTGCTGTCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSAFSTV*CCCLAR
Trigger: TCGTGCCAGACAGCAACAGCACACAGTTGAAAACGC...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSGCRV*IHGSVL
Trigger: AAGGACTGAACCATGAATGCAAACTCTGCAGCCAGA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAGTCAAAGGTCTGGCTaGAGAGTTTGCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSQRSG*RVCIHG
Trigger: ACCATGAATGCAAACTCTGCAGCCAGACCTTTGACT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: LSSCGVLFCENISSWFARKGSIR*AKVQTH
Trigger: ATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTT...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAATCTGCAATGTGTTTTTaGAGGTCTTCCGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: ALTAVLGHCMILQLCLEESAMCF*RSSGKS
Trigger: TGACTTCCCGGAAGACCTCCAAAAACACATTGCAGA...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGAATCTGGAGTCGTACTaGACACGGAGGTATAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRNLESY*TRRYSP
Trigger: TGGGCTATACCTCCGTGTCCAGTACGACTCCAGATT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTAATCTGGAGTCGTACTaGACACGGAGGTATAGCCCA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSNLESY*TRRYSP
Trigger: TGGGCTATACCTCCGTGTCCAGTACGACTCCAGATT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTGTCCACTGAGAGGTTaGAATCTGGAGTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSCPLRG*NLESYW
Trigger: CCAGTACGACTCCAGATTCCAACCTCTCAGTGGACA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATGTCCACTGAGAGGTTaGAATCTGGAGTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQCPLRG*NLESYW
Trigger: CCAGTACGACTCCAGATTCCAACCTCTCAGTGGACA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAAAGAAACAATCAGACCTaGGTCCTGAGCTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQRNNQT*VLSFMH
Trigger: GTGCATGAAGCTCAGGACCCAGGTCTGATTGTTTCT...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTACACTGGTAGACAATaGCAGGCATGGCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFYTGRQ*QAWQKQ
Trigger: TTGTTTCTGCCATGCCTGCCATTGTCTACCAGTGTA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTCTACTACTGGTTCTTTaGGAGTCCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSLLLVL*ESQALE
Trigger: CTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAG...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAAGATATATTCTCCAGTaGGACGTGCAGGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKRYILQ*DVQVHL
Trigger: GAGGTGCACCTGCACGTCCCACTGGAGAATATATCT...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTAGGACAGGTCAATTTTaGAAGCACAGTGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVRTGQF*KHSVEM
Trigger: CATCTCGACACTGTGCTTCCAAAATTGACCTGTCCT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGAGTCAAAAACTTCCTaGCAGAGGGTGCAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNESKTS*QRVQRK
Trigger: CTTTCGCTGCACCCTCTGCCAGGAAGTTTTTGACTC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTGGTTGTGTTTCACATaGAGCTGCAAGTCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQWLCFT*SCKSVS
Trigger: CGAAACTGACTTGCAGCTCCATGTGAAACACAACCA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCCTTGGTTTTCCAGGTaGTTGTGTTTCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNPWFSR*LCFTWS
Trigger: GCTCCATGTGAAACACAACCACCTGGAAAACCAAGG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTATGTGGAACGTCCCATaGATTTTGAGTTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFMWNVP*ILSSKV
Trigger: CACCTTGGAACTCAAAATCCATGGGACGTTCCACAT...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCTGTCTTTTGCATGTaGAACGTCCCATGGATTTTG +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPVFCM*NVPWIL
Trigger: CAAAATCCATGGGACGTTCCACATGCAAAAGACAGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGGCACACAGACCATATaGCAGGCCATTGATATCAAG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMGTQTI*QAIDIK
Trigger: CTTGATATCAATGGCCTGCCATATGGTCTGTGTGCC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCTCAGATTCTCATTCTaGCCCAAGCCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNLRFSF*PKPGLF
Trigger: GAATAGACCAGGCTTGGGCCAGAATGAGAATCTGAG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGCCTTTCCCCTCAATaGCACTCAGATTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVCLSPQ*HSDSHS
Trigger: AGAATGAGAATCTGAGTGCCATTGAGGGGAAAGGCA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCTCGGTGGATGGTTTaGATGTGGTTCTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSRWMV*MWFWSS
Trigger: TGAACTCCAGAACCACATCCAAACCATCCACCGAGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGGAGAGTCAAAGGTCTaGCTGCAGAGTTTGCATTCA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNGESKV*LQSLHS
Trigger: TGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAGGTGGCACTGGAGTTTaGCAGGAGAGTCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIGGTGV*QESQRS
Trigger: AGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACC...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTCTATCAGGTGGCACTaGAGTTTGGCAGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVSIRWH*SLAGES
Trigger: TGACTCTCCTGCCAAACTCCAGTGCCACCTGATAGA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATACTGTAAAGCAGACTaGACACTTGAAGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTYCKAD*TLEGAS
Trigger: GGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCTTCAAGTTTACAGTTaGGGTCTGCAAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQLQVYS*GLQGLG
Trigger: TCCAAGACCTTGCAGACCCCAACTGTAAACTTGAAG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584787.5
CDS-3UTR TCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATGACTTGTCACAGAATTaGCACGGGTATGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYDLSQN*HGYGSP
Trigger: TGGGCTTCCATACCCGTGTCAATTCTGTGACAAGTC...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAGACTTGTCACAGAATTaGCACGGGTATGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIDLSQN*HGYGSP
Trigger: TGGGCTTCCATACCCGTGTCAATTCTGTGACAAGTC...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTAAGTGGATCTTCAAGTaGTCACTTCTGGAAAACGCA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVKWIFK*SLLENA
Trigger: TGCGTTTTCCAGAAGTGATCACTTGAAGATCCACTT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAACCTCCAAGCAATACTaGCAAATATGGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTTSKQY*QIWACS
Trigger: AGAACAGGCCCATATTTGTCAGTATTGCTTGGAGGT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATGGGTTTGCAAATCCATaGGAACATCGGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNGFANP*EHRMCS
Trigger: GGAACACATCCGATGTTCTCATGGATTTGCAAACCC...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTCCAGGGAAGAGTCAGTaGGAAACCCCATATAGCAAT +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSPGKSQ*ETPYSN
Trigger: ATTGCTATATGGGGTTTCTCACTGACTCTTCCCTGG...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACCACTGAGGTCACAATaGACCTGTCTAATATGCTCT +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTPLRSQ*TCLICS
Trigger: AGAGCATATTAGACAGGTTCATTGTGACCTCAGTGG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCTGAATGGAGACTTTTaGGTCAAAAACTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFLNGDF*VKNFLA
Trigger: TGCCAGGAAGTTTTTGACTCAAAAGTCTCCATTCAG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTCAGCATCACATTCACTaGAGTGGTACTTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSQHHIH*SGTSCP
Trigger: GGGACAAGAAGTACCACTGCAGTGAATGTGATGCTG...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCAGCATCACATTCACTaGAGTGGTACTTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVQHHIH*SGTSCP
Trigger: GGGACAAGAAGTACCACTGCAGTGAATGTGATGCTG...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTCTTCCTCACACTGACTaGACTTCTGAGTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSLPHTD*TSECPS
Trigger: TGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAG...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCCAGGGAAGGGCTGTTaGTGTGATTGCATGACTCCG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIPGKGC*CDCMTP
Trigger: CGGAGTCATGCAATCACAGCAACAGCCCTTCCCTGG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGGCTGTAGGTAACTTTTaGTTGTTTACTCGAGGGACC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMAVGNF*LFTRGT
Trigger: GGTCCCTCGAGTAAACAAGCAAAAGTTACCTACAGC...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTGCACCTCCTACTGCCTaGATCATCTTAAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSAPPTA*IILRDV
Trigger: GACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGC...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATGCGGAAGTCCCAGTTaGAAGATGTGCACCTATAGA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQCGSPS*KMCTYR
Trigger: TCTATAGGTGCACATCTTGCAACTGGGACTTCCGCA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTGCGGAAGTCCCAGTTaGAAGATGTGCACCTATAGA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSCGSPS*KMCTYR
Trigger: TCTATAGGTGCACATCTTGCAACTGGGACTTCCGCA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATGTTTCACATGGAGCTaGAAGTCAGTTTCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKCFTWS*KSVSLR
Trigger: CCGCAACGAAACTGACTTGCAGCTCCATGTGAAACA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCCTCTTTCTGCACTTaGTCGGAAGCTCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSSFCT*SEAPFV
Trigger: AACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTTGGTCAGCAAAGTCTaGAGCTCCACTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSLVSKV*SSTSSF
Trigger: GAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTTGGTCAGCAAAGTCTaGAGCTCCACTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNLVSKV*SSTSSF
Trigger: GAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGGGTGCATTTGGCAATaGTCTAAAAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVGCIWQ*SKNSSS
Trigger: TGAAGAGGAGTTTTTAGAGCATTGCCAAATGCACCC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGGGTGCATTTGGCAATaGTCTAAAAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQGCIWQ*SKNSSS
Trigger: TGAAGAGGAGTTTTTAGAGCATTGCCAAATGCACCC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGGGTGCATTTGGCAATaGTCTAAAAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFGCIWQ*SKNSSS
Trigger: TGAAGAGGAGTTTTTAGAGCATTGCCAAATGCACCC...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSGCRV*IHGSVL
Trigger: AAGGACTGAACCATGAATGCAAACTCTGCAGCCAGA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSGCRV*IHGSVL
Trigger: AAGGACTGAACCATGAATGCAAACTCTGCAGCCAGA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAGTCAAAGGTCTGGCTaGAGAGTTTGCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSQRSG*RVCIHG
Trigger: ACCATGAATGCAAACTCTGCAGCCAGACCTTTGACT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTGTACTTGCACTAACTaGTGTGTTGGGTCATTGTAT +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARICTCTN*CVGSLY
Trigger: ATACAATGACCCAACACAGCAGTTAGTGCAAGTACA...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTTGAGAGACTGTACTTaGACTAACTGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNLRDCT*TNCCVG
Trigger: CCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATTGAGAGACTGTACTTaGACTAACTGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTLRDCT*TNCCVG
Trigger: CCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGAGCGATTCAAACACCTaGAGGCAGCTGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRSDSNT*RQLSQL
Trigger: CAGCTGTGACAGCTGCCTCCAGGTGTTTGAATCGCT...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTCTTGTCCCCGGTGTaGAGTTTTATGTGGCGATCT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQFLSPV*SFMWRS
Trigger: AGATCGCCACATAAAACTCCACACCGGGGACAAGAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATTCACATTCACTGCAGTaGTACTTCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYSHSLQ*YFLSPV
Trigger: CACCGGGGACAAGAAGTACCACTGCAGTGAATGTGA...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAACCCACGGCGACAAATaGCACATTTATATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTTHGDK*HIYMAC
Trigger: ACAAGCCATATAAATGTGCCATTTGTCGCCGTGGGT...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCATAGACTTCTACTACTaGTTCTTTGGGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRIDFYY*FFGSPK
Trigger: CTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTAT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCCTTGGTTTTCCAGGTaGTTGTGTTTCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRPWFSR*LCFTWS
Trigger: GCTCCATGTGAAACACAACCACCTGGAAAACCAAGG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAATGTGGAACGTCCCATaGATTTTGAGTTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTMWNVP*ILSSKV
Trigger: CACCTTGGAACTCAAAATCCATGGGACGTTCCACAT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCAGGGACGTTAATGCCTaGGCTGGCGCTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIRDVNA*AGALTE
Trigger: CTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTGCCTTTCCCCTCAATaGCACTCAGATTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNCLSPQ*HSDSHS
Trigger: AGAATGAGAATCTGAGTGCCATTGAGGGGAAAGGCA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGTTTGGATGTGGTTCTaGAGTTCACTTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQVWMWF*SSLSDS
Trigger: TGAGTCTGAAAGTGAACTCCAGAACCACATCCAAAC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTGGATGGTTTGGATGTaGTTCTGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRWMVWM*FWSSLS
Trigger: TGAAAGTGAACTCCAGAACCACATCCAAACCATCCA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTCTCGGTGGATGGTTTaGATGTGGTTCTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVSRWMV*MWFWSS
Trigger: TGAACTCCAGAACCACATCCAAACCATCCACCGAGA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGTGCTGTTGCTGTCTaGCACGAGCTCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSICAVAV*HELSVD
Trigger: ATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGGCATTGGTGATACTTaGGGCGTTTTCAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQGIGDT*GVFNCV
Trigger: CACACAGTTGAAAACGCCCCAAGTATCACCAATGCC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTGGAGAGTCAAAGGTCTaGCTGCAGAGTTTGCATTCA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSGESKV*LQSLHS
Trigger: TGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCC...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACATCTATCAGGTGGCACTaGAGTTTGGCAGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTSIRWH*SLAGES
Trigger: TGACTCTCCTGCCAAACTCCAGTGCCACCTGATAGA...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATCTATCAGGTGGCACTaGAGTTTGGCAGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIISIRWH*SLAGES
Trigger: TGACTCTCCTGCCAAACTCCAGTGCCACCTGATAGA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR CAA 72 bp ACATGTTCCCTTTTTGTGCCACAAAATCAATTCTCCTaGAGAGACTGTACTTGCACTAACTGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TCSLFVPQNQFS*RDCTCTNCCVG
Trigger: CCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTTGTGGCACAAAAAGGGAACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGGCTAGGGGAAGTCTaGTCCTTGCTAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIWLGEV*SLLEGE
Trigger: CTCACCTTCTAGCAAGGATCAGACTTCCCCTAGCCA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTAAGTGGATCTTCAAGTaGTCACTTCTGGAAAACGCA +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSKWIFK*SLLENA
Trigger: TGCGTTTTCCAGAAGTGATCACTTGAAGATCCACTT...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAAAAGTGGATCTTCAAGTaGTCACTTCTGGAAAACGCA +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQKWIFK*SLLENA
Trigger: TGCGTTTTCCAGAAGTGATCACTTGAAGATCCACTT...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATGCATAGTTTTCAGGTaGATCTGCAGAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQCIVFR*ICRTAR
Trigger: TCTTGCAGTTCTGCAGATTCACCTGAAAACTATGCA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCCACTGAGGTCACAATaGACCTGTCTAATATGCTCT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRPLRSQ*TCLICS
Trigger: AGAGCATATTAGACAGGTTCATTGTGACCTCAGTGG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAAATTCCTTGTTGCACTaGGGACAGGTCAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTNSLLH*GQVNFG
Trigger: TCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGAAGTGATCATAAAGTaGATGGTAACATGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQEVIIK*MVTCFS
Trigger: GCTGAAGCATGTTACCATTCACTTTATGATCACTTC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGGTCATCCACTGATGTaGATTGCTTGTCACAACTCT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNGHPLM*IACHNS
Trigger: AGAGTTGTGACAAGCAATTCACATCAGTGGATGACC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAACAGCCAAGTGGAGCTaGATGGAGACTTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIITAKWS*METFES
Trigger: TGACTCAAAAGTCTCCATTCAGCTCCACTTGGCTGT...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATGTTTTTCTAACAAAATaGTCGCATGGAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VCLNKYCKADWTLEGASHVFLTK*SHGRLC
Trigger: GCAAAGCCTTCCATGCGATCATTTTGTTAGAAAAAC...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTGGAACGGAATTCTTTaGGGCAAGATGCGCACTTAT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNWNGIL*GKMRTY
Trigger: ATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCCATATGGCAGGCCATTaGTATCAAGTTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: NIYIRALSSCGVLFCENIHMAGH*YQVSPD
Trigger: ATCTGGTGAAACTTGATATCAATGGCCTGCCATATG...GATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGAAACCATCTGACACTTaGTGCATTGATAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQKPSDT*CIDRSS
Trigger: AGAAGACCTATCAATGCATCAAGTGTCAGATGGTTT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATGTTGGGTCATTGTATaGTTCTGCAGCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKCWVIV*FCSSVW
Trigger: CCAAACAGAGCTGCAGAATCATACAATGACCCAACA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTGATAGGTCTTCTTGGTaGAGCTATGCTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSDRSSW*SYAEIP
Trigger: TGGAATCTCAGCATAGCTTCACCAAGAAGACCTATC...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACAGCATCACATTCACTaGAGTGGTACTTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIQHHIH*SGTSCP
Trigger: GGGACAAGAAGTACCACTGCAGTGAATGTGATGCTG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGCTGTAGGTAACTTTTaGTTGTTTACTCGAGGGACC +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQAVGNF*LFTRGT
Trigger: GGTCCCTCGAGTAAACAAGCAAAAGTTACCTACAGC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTTTAGCTGCAGGGTTTaGAAATCCATGAGAACATCG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMFSCRV*KSMRTS
Trigger: CGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATGGGGAATTCCTTGTTaGACTGAGGACAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQWGIPC*TEDRSI
Trigger: AATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATTCTTTTCGTTACTGTaGTTCACAGCCAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKFFSLL*FTAKWS
Trigger: GCTCCACTTGGCTGTGAAGCACAGTAACGAAAAGAA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATGTTTCACATGGAGCTaGAAGTCAGTTTCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIICFTWS*KSVSLR
Trigger: CCGCAACGAAACTGACTTGCAGCTCCATGTGAAACA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAAACTCACCGCAGAAAATaGACTTATGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQTHRRK*TYALSL
Trigger: AAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGT...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR GCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTCCTCTTTCTGCACTTaGTCGGAAGCTCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRSSFCT*SEAPFV
Trigger: AACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATTGGTCAGCAAAGTCTaGAGCTCCACTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIILVSKV*SSTSSF
Trigger: GAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGCCATTCCCTGTCTTTTaGATGTGGAACGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRPFPVF*MWNVPW
Trigger: CCATGGGACGTTCCACATGCAAAAGACAGGGAATGG...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAGTTTCACCAGATCTTaGTTGGAACGGAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSFTRS*LERNSL
Trigger: CAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTAGTTTCACCAGATCTTaGTTGGAACGGAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFSFTRS*LERNSL
Trigger: CAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACT...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTGGGCAGAGAAAATATaGTGCTGCAACTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: IARLTNIYIRALSSCGVLWAEKI*CCNLFA
Trigger: AGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCA...CAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVKGSIR*AKVQTH
Trigger: ATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATTCTTGTCCCCGGTGTaGAGTTTTATGTGGCGATCT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIFLSPV*SFMWRS
Trigger: AGATCGCCACATAAAACTCCACACCGGGGACAAGAA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTCAAGTGATCACTTCTaGAAAACGCAGCATCACATT +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQSSDHF*KTQHHI
Trigger: AATGTGATGCTGCGTTTTCCAGAAGTGATCACTTGA...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACACCCACGGCGACAAATaGCACATTTATATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNTHGDK*HIYMAC
Trigger: ACAAGCCATATAAATGTGCCATTTGTCGCCGTGGGT...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTCTGCAATGTGTTTTTaGAGGTCTTCCGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRSAMCF*RSSGKS
Trigger: TGACTTCCCGGAAGACCTCCAAAAACACATTGCAGA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTCTGCAATGTGTTTTTaGAGGTCTTCCGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVSAMCF*RSSGKS
Trigger: TGACTTCCCGGAAGACCTCCAAAAACACATTGCAGA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTACACTGGTAGACAATaGCAGGCATGGCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSYTGRQ*QAWQKQ
Trigger: TTGTTTCTGCCATGCCTGCCATTGTCTACCAGTGTA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATACACTGGTAGACAATaGCAGGCATGGCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQYTGRQ*QAWQKQ
Trigger: TTGTTTCTGCCATGCCTGCCATTGTCTACCAGTGTA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGATAGACTTCTACTACTaGTTCTTTGGGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMIDFYY*FFGSPK
Trigger: CTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTAT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTAGGACAGGTCAATTTTaGAAGCACAGTGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSRTGQF*KHSVEM
Trigger: CATCTCGACACTGTGCTTCCAAAATTGACCTGTCCT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGCAAGGATTCTTGGTTaGGGAATTCCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNARILG*GIPCCT
Trigger: AGTGCAACAAGGAATTCCCCAACCAAGAATCCTTGC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGCAAGGATTCTTGGTTaGGGAATTCCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVARILG*GIPCCT
Trigger: AGTGCAACAAGGAATTCCCCAACCAAGAATCCTTGC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGCAAGGATTCTTGGTTaGGGAATTCCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKARILG*GIPCCT
Trigger: AGTGCAACAAGGAATTCCCCAACCAAGAATCCTTGC...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATTCAGCAAGGATTCTTaGTTGGGGAATTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQFSKDS*LGNSLL
Trigger: CAACAAGGAATTCCCCAACCAAGAATCCTTGCTGAA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATGGTTGTGTTTCACATaGAGCTGCAAGTCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKWLCFT*SCKSVS
Trigger: CGAAACTGACTTGCAGCTCCATGTGAAACACAACCA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGTGGTTGTGTTTCACATaGAGCTGCAAGTCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLWLCFT*SCKSVS
Trigger: CGAAACTGACTTGCAGCTCCATGTGAAACACAACCA...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATTATGCACTTTCCCTTaGTTTTCCAGGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTLCTFP*FSRWLC
Trigger: ACACAACCACCTGGAAAACCAAGGGAAAGTGCATAA...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCACAGTTGGGTGTCTTaGTTTCGAATACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNHSWVS*FRIHSV
Trigger: AACACTGTGTATTCGAAACCAAGACACCCAACTGTG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCATTTGTTCCACAGTTaGGTGTCTTGGTTTCGAATA +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFHLFHS*VSWFRI
Trigger: TATTCGAAACCAAGACACCCAACTGTGGAACAAATG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTGTTGTGGGACTCCTaGCTGTTGGTCAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILLWDS*LLVSKV
Trigger: GACTTTGCTGACCAACAGCCAGGAGTCCCACAACAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTATGTGGAACGTCCCATaGATTTTGAGTTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSMWNVP*ILSSKV
Trigger: CACCTTGGAACTCAAAATCCATGGGACGTTCCACAT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCCTGTCTTTTGCATGTaGAACGTCCCATGGATTTTG +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRPVFCM*NVPWIL
Trigger: CAAAATCCATGGGACGTTCCACATGCAAAAGACAGG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAACCTGTCTTTTGCATGTaGAACGTCCCATGGATTTTG +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKPVFCM*NVPWIL
Trigger: CAAAATCCATGGGACGTTCCACATGCAAAAGACAGG...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCACTTATACAGTTTTTaGACGTGCTGGCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIHLYSF*TCWPRP
Trigger: AGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATGGATGGTTTGGATGTaGTTCTGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTWMVWM*FWSSLS
Trigger: TGAAAGTGAACTCCAGAACCACATCCAAACCATCCA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTGGATGGTTTGGATGTaGTTCTGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMWMVWM*FWSSLS
Trigger: TGAAAGTGAACTCCAGAACCACATCCAAACCATCCA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATACTGTAAAGCAGACTaGACACTTGAAGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIYCKAD*TLEGAS
Trigger: GGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGAGAACATCTCTTCATaGTTTGCAAGAATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQENISS*FARIFS
Trigger: GCTGAAGATTCTTGCAAACCATGAAGAGATGTTCTC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTGCATAGTTTTCAGGTaGATCTGCAGAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSCIVFR*ICRTAR
Trigger: TCTTGCAGTTCTGCAGATTCACCTGAAAACTATGCA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCATAGTTTTCAGGTaGATCTGCAGAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRCIVFR*ICRTAR
Trigger: TCTTGCAGTTCTGCAGATTCACCTGAAAACTATGCA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAACCTCCAAGCAATACTaGCAAATATGGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTTSKQY*QIWACS
Trigger: AGAACAGGCCCATATTTGTCAGTATTGCTTGGAGGT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGCCAGGGAAGAGTCAGTaGGAAACCCCATATAGCAAT +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRPGKSQ*ETPYSN
Trigger: ATTGCTATATGGGGTTTCTCACTGACTCTTCCCTGG...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACAATTCCTTGTTGCACTaGGGACAGGTCAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNNSLLH*GQVNFG
Trigger: TCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATT...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTAATTCCTTGTTGCACTaGGGACAGGTCAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSNSLLH*GQVNFG
Trigger: TCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAGGTCATCCACTGATGTaGATTGCTTGTCACAACTCT +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTGHPLM*IACHNS
Trigger: AGAGTTGTGACAAGCAATTCACATCAGTGGATGACC...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACTGAATGGAGACTTTTaGGTCAAAAACTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQLNGDF*VKNFLA
Trigger: TGCCAGGAAGTTTTTGACTCAAAAGTCTCCATTCAG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTCTTACTGTGAGTGGTaGTGTGGCATTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSISYCEW*CGIAAP
Trigger: TGGAGCTGCAATGCCACATCACCACTCACAGTAAGA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATGGAACGGAATTCTTTaGGGCAAGATGCGCACTTAT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIWNGIL*GKMRTY
Trigger: ATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACATATGGCAGGCCATTaGTATCAAGTTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQHMAGH*YQVSPD
Trigger: ATCTGGTGAAACTTGATATCAATGGCCTGCCATATG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCATATGGCAGGCCATTaGTATCAAGTTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRHMAGH*YQVSPD
Trigger: ATCTGGTGAAACTTGATATCAATGGCCTGCCATATG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGAAAATCAATTCTCCTTaGGAGACTGTACTTGCACTA +
Preference number: 4 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQKINSP*ETVLAL
Trigger: TAGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTTTAGCTGCAGGGTTTaGAAATCCATGAGAACATCG +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSFSCRV*KSMRTS
Trigger: CGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCATTACTATCTTTAGCTaGAGGGTTTGCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRITIFS*RVCKSM
Trigger: CATGGATTTGCAAACCCTGCAGCTAAAGATAGTAAT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATATCTTAAGAGATGTCTaGTCTATGGCCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNILRDV*SMATGD
Trigger: ATCTCCTGTGGCCATAGAGCAGACATCTCTTAAGAT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGATCTTAAGAGATGTCTaGTCTATGGCCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVILRDV*SMATGD
Trigger: ATCTCCTGTGGCCATAGAGCAGACATCTCTTAAGAT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTCCACTGATGTGAATTaGTTGTCACAACTCTCACAG +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVSTDVN*LSQLSQ
Trigger: CTGTGAGAGTTGTGACAAGCAATTCACATCAGTGGA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATCCACTGATGTGAATTaGTTGTCACAACTCTCACAG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQSTDVN*LSQLSQ
Trigger: CTGTGAGAGTTGTGACAAGCAATTCACATCAGTGGA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGCCCAGTTGCAAGATGTaGACCTATAGACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMPSCKM*TYRLSF
Trigger: AAAAGAAAGTCTATAGGTGCACATCTTGCAACTGGG...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGACTCACCGCAGAAAATaGACTTATGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRTHRRK*TYALSL
Trigger: AAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCTTTGCTACAGAACTTaGAGTTGTACTTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFLCYRT*SCTSYC
Trigger: ACAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCCTTTGCTACAGAACTTaGAGTTGTACTTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRLCYRT*SCTSYC
Trigger: ACAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAG...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACATCGCATGGAAGGCTTTaGTACAGAACTTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTSHGRL*YRTCSC
Trigger: ACAACTGCAAGTTCTGTAGCAAAGCCTTCCATGCGA...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAAGTTTCACCAGATCTTaGTTGGAACGGAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTSFTRS*LERNSL
Trigger: CAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACT...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATAGTCAAAGGTCTGGCTaGAGAGTTTGCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYSQRSG*RVCIHG
Trigger: ACCATGAATGCAAACTCTGCAGCCAGACCTTTGACT...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp TCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCCTGCTGCAACTTGTTTaGTTGAACAAATACTGTAAA +
Preference number: 4 (lower is better)
Translates to: SSCGVLFCENISSWFARILLQLV*LNKYCK
Trigger: TTTACAGTATTTGTTCAAGCAAACAAGTTGCAGCAG...GATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTGGGCAGAGAAAATATaGTGCTGCAACTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNWAEKI*CCNLFA
Trigger: AGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATTGAGAGACTGTACTTaGACTAACTGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIILRDCT*TNCCVG
Trigger: CCCAACACAGCAGTTAGTGCAAGTACAGTCTCTCAA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAAAGGGGTCTATCCGGTaGGCAAAAGTTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIKGSIR*AKVQTH
Trigger: ATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTT...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAAATGGCACATTTATATaGCTTGTTGGACGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTNGTFI*LVGRVS
Trigger: ACTCACACGTCCAACAAGCCATATAAATGTGCCATT...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGAGAAACAATCAGACCTaGGTCCTGAGCTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRRNNQT*VLSFMH
Trigger: GTGCATGAAGCTCAGGACCCAGGTCTGATTGTTTCT...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTACTACTGGTTCTTTaGGAGTCCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILLLVL*ESQALE
Trigger: CTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATAGACTTCTACTACTaGTTCTTTGGGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNIDFYY*FFGSPK
Trigger: CTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTAT...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCAGATATATTCTCCAGTaGGACGTGCAGGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIRYILQ*DVQVHL
Trigger: GAGGTGCACCTGCACGTCCCACTGGAGAATATATCT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTTCAGCAAGGATTCTTaGTTGGGGAATTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRFSKDS*LGNSLL
Trigger: CAACAAGGAATTCCCCAACCAAGAATCCTTGCTGAA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTCAGCAAGGATTCTTaGTTGGGGAATTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQFSKDS*LGNSLL
Trigger: CAACAAGGAATTCCCCAACCAAGAATCCTTGCTGAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTTATGCACTTTCCCTTaGTTTTCCAGGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVLCTFP*FSRWLC
Trigger: ACACAACCACCTGGAAAACCAAGGGAAAGTGCATAA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACAAAATGATCGCATaGAAGGCTTTGCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMNKMIA*KALLQN
Trigger: GTTCTGTAGCAAAGCCTTCCATGCGATCATTTTGTT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCACAGTTGGGTGTCTTaGTTTCGAATACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNHSWVS*FRIHSV
Trigger: AACACTGTGTATTCGAAACCAAGACACCCAACTGTG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCATTTGTTCCACAGTTaGGTGTCTTGGTTTCGAATA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNHLFHS*VSWFRI
Trigger: TATTCGAAACCAAGACACCCAACTGTGGAACAAATG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATGCCTTTCCCCTCAATaGCACTCAGATTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIICLSPQ*HSDSHS
Trigger: AGAATGAGAATCTGAGTGCCATTGAGGGGAAAGGCA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGTTTGGATGTGGTTCTaGAGTTCACTTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNVWMWF*SSLSDS
Trigger: TGAGTCTGAAAGTGAACTCCAGAACCACATCCAAAC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATTCTCGGTGGATGGTTTaGATGTGGTTCTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: WLREIIKENLEHSKLQMYSRWMV*MWFWSS
Trigger: TGAACTCCAGAACCACATCCAAACCATCCACCGAGA...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACAGAGTTTGCATTCATaGTTCAGTCCTTCATCAATC +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTQSLHS*FSPSSI
Trigger: GATTGATGAAGGACTGAACCATGAATGCAAACTCTG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACTTGTCTTCTTGTCCATaGGCAGAGAAAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNLSSCP*AEKICC
Trigger: GCAGCATATTTTCTCTGCCCATGGACAAGAAGACAA...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTGTCTTCTTGTCCATaGGCAGAGAAAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQLSSCP*AEKICC
Trigger: GCAGCATATTTTCTCTGCCCATGGACAAGAAGACAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTTCTGCAGCTCTGTTTaGAAGAAAAACTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMFCSSV*KKNFCG
Trigger: TCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTTCTGCAGCTCTGTTTaGAAGAAAAACTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNFCSSV*KKNFCG
Trigger: TCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCGGGTTTGCAAATCCATaGGAACATCGGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIGFANP*EHRMCS
Trigger: GGAACACATCCGATGTTCTCATGGATTTGCAAACCC...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCCAGGGAAGAGTCAGTaGGAAACCCCATATAGCAAT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIPGKSQ*ETPYSN
Trigger: ATTGCTATATGGGGTTTCTCACTGACTCTTCCCTGG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGAAGTGATCATAAAGTaGATGGTAACATGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNEVIIK*MVTCFS
Trigger: GCTGAAGCATGTTACCATTCACTTTATGATCACTTC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCTGAATGGAGACTTTTaGGTCAAAAACTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYLNGDF*VKNFLA
Trigger: TGCCAGGAAGTTTTTGACTCAAAAGTCTCCATTCAG...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGTTTTTCTAACAAAATaGTCGCATGGAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNVFLTK*SHGRLC
Trigger: GCAAAGCCTTCCATGCGATCATTTTGTTAGAAAAAC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGTGGAACGGAATTCTTTaGGGCAAGATGCGCACTTAT +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRWNGIL*GKMRTY
Trigger: ATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCA...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIDSGHW*YLGRFQ
Trigger: TTGAAAACGCCCCAAGTATCACCAATGCCCAGAATC...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATAAACCATCTGACACTTaGTGCATTGATAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNKPSDT*CIDRSS
Trigger: AGAAGACCTATCAATGCATCAAGTGTCAGATGGTTT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp ATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTGCAACTTGTTTGCTTaGACAAATACTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: IARLTNIYIRALSSCGVLCNLFA*TNTVKQ
Trigger: CTGCTTTACAGTATTTGTTCAAGCAAACAAGTTGCA...CAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACTGCAACTTGTTTGCTTaGACAAATACTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNCNLFA*TNTVKQ
Trigger: CTGCTTTACAGTATTTGTTCAAGCAAACAAGTTGCA...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAATTACTATCTTTAGCTaGAGGGTTTGCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTITIFS*RVCKSM
Trigger: CATGGATTTGCAAACCCTGCAGCTAAAGATAGTAAT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCCCAGTTGCAAGATGTaGACCTATAGACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNPSCKM*TYRLSF
Trigger: AAAAGAAAGTCTATAGGTGCACATCTTGCAACTGGG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACCCAGTTGCAAGATGTaGACCTATAGACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQPSCKM*TYRLSF
Trigger: AAAAGAAAGTCTATAGGTGCACATCTTGCAACTGGG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGCGGAAGTCCCAGTTaGAAGATGTGCACCTATAGA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSICGSPS*KMCTYR
Trigger: TCTATAGGTGCACATCTTGCAACTGGGACTTCCGCA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAACTCACCGCAGAAAATaGACTTATGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTTHRRK*TYALSL
Trigger: AAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACATTCTTTGAGGCAAGATaGGCACTTATACAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTFFEAR*ALIQFL
Trigger: CAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAA...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTGTACTTGCACTAACTaGTGTGTTGGGTCATTGTAT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNCTCTN*CVGSLY
Trigger: ATACAATGACCCAACACAGCAGTTAGTGCAAGTACA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGTGTACTTGCACTAACTaGTGTGTTGGGTCATTGTAT +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVCTCTN*CVGSLY
Trigger: ATACAATGACCCAACACAGCAGTTAGTGCAAGTACA...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATCAAGTGATCACTTCTaGAAAACGCAGCATCACATT +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKSSDHF*KTQHHI
Trigger: AATGTGATGCTGCGTTTTCCAGAAGTGATCACTTGA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGTGATCACTTCTaGAAAACGCAGCATCACATT +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSSSDHF*KTQHHI
Trigger: AATGTGATGCTGCGTTTTCCAGAAGTGATCACTTGA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATAATGGCACATTTATATaGCTTGTTGGACGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNNGTFI*LVGRVS
Trigger: ACTCACACGTCCAACAAGCCATATAAATGTGCCATT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGAATGGCACATTTATATaGCTTGTTGGACGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRNGTFI*LVGRVS
Trigger: ACTCACACGTCCAACAAGCCATATAAATGTGCCATT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAAACAAAATGATCGCATaGAAGGCTTTGCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKNKMIA*KALLQN
Trigger: GTTCTGTAGCAAAGCCTTCCATGCGATCATTTTGTT...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACACAGTTGGGTGTCTTaGTTTCGAATACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIHSWVS*FRIHSV
Trigger: AACACTGTGTATTCGAAACCAAGACACCCAACTGTG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCATTTGTTCCACAGTTaGGTGTCTTGGTTTCGAATA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVHLFHS*VSWFRI
Trigger: TATTCGAAACCAAGACACCCAACTGTGGAACAAATG...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCGGCACACAGACCATATaGCAGGCCATTGATATCAAG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIGTQTI*QAIDIK
Trigger: CTTGATATCAATGGCCTGCCATATGGTCTGTGTGCC...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTCAGATTCTCATTCTaGCCCAAGCCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILRFSF*PKPGLF
Trigger: GAATAGACCAGGCTTGGGCCAGAATGAGAATCTGAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAGTTTGGATGTGGTTCTaGAGTTCACTTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIVWMWF*SSLSDS
Trigger: TGAGTCTGAAAGTGAACTCCAGAACCACATCCAAAC...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGCAGAGTTTGCATTCATaGTTCAGTCCTTCATCAATC +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLQSLHS*FSPSSI
Trigger: GATTGATGAAGGACTGAACCATGAATGCAAACTCTG...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR TCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAGAAGTGATCATAAAGTaGATGGTAACATGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTEVIIK*MVTCFS
Trigger: GCTGAAGCATGTTACCATTCACTTTATGATCACTTC...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGTTGGGTCATTGTATaGTTCTGCAGCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSICWVIV*FCSSVW
Trigger: CCAAACAGAGCTGCAGAATCATACAATGACCCAACA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR TCA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGAAAATCAATTCTCCTTaGGAGACTGTACTTGCACTA +
Preference number: 4 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQKINSP*ETVLAL
Trigger: TAGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTT...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATAAAATCAATTCTCCTTaGGAGACTGTACTTGCACTA +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNKINSP*ETVLAL
Trigger: TAGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTAACTCTCAGAACAAATaGTGCATGAGTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSNSQNK*CMSSSS
Trigger: AGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTT...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAAACTCTCAGAACAAATaGTGCATGAGTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQNSQNK*CMSSSS
Trigger: AGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTT...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTGGGGAATTCCTTGTTaGACTGAGGACAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIWGIPC*TEDRSI
Trigger: AATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATCAAGACTCTTACTATaGGTGACTTTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQSRLLL*VTLCSV
Trigger: TACTGAACACAAAGTCACGCATAGTAAGAGTCTTGA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATCAAGACTCTTACTATaGGTGACTTTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKSRLLL*VTLCSV
Trigger: TACTGAACACAAAGTCACGCATAGTAAGAGTCTTGA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACTTCTTTGAGGCAAGATaGGCACTTATACAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNFFEAR*ALIQFL
Trigger: CAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAA...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTCTTTGAGGCAAGATaGGCACTTATACAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQFFEAR*ALIQFL
Trigger: CAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGCATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCACCCACGGCGACAAATaGCACATTTATATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSITHGDK*HIYMAC
Trigger: ACAAGCCATATAAATGTGCCATTTGTCGCCGTGGGT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAACGCTGTTGAATATTaGCGAATTTGTACAATAGGA +
Preference number: 4 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNNAVEY*RICTIG
Trigger: TCCTATTGTACAAATTCGCCAATATTCAACAGCGTT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTACTGATTCAAGAATTTaGCTGCGTGAAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: IYIYGPYPAVGFCSVRTSTDSRI*LREIIK
Trigger: CTTAATGATTTCACGCAGCCAAATTCTTGAATCAGT...AGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGGTTTTTCTAACAAAATaGTCGCATGGAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRVFLTK*SHGRLC
Trigger: GCAAAGCCTTCCATGCGATCATTTTGTTAGAAAAAC...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAAACTCTCAGAACAAATaGTGCATGAGTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTNSQNK*CMSSSS
Trigger: AGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTTTAGCTGCAGGGTTTaGAAATCCATGAGAACATCG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIFSCRV*KSMRTS
Trigger: CGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATATTACTATCTTTAGCTaGAGGGTTTGCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYITIFS*RVCKSM
Trigger: CATGGATTTGCAAACCCTGCAGCTAAAGATAGTAAT...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTCCACTGATGTGAATTaGTTGTCACAACTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSISTDVN*LSQLSQ
Trigger: CTGTGAGAGTTGTGACAAGCAATTCACATCAGTGGA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCTTTGCTACAGAACTTaGAGTTGTACTTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYLCYRT*SCTSYC
Trigger: ACAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAG...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCTGCTGCAACTTGTTTaGTTGAACAAATACTGTAAA +
Preference number: 4 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNLLQLV*LNKYCK
Trigger: TTTACAGTATTTGTTCAAGCAAACAAGTTGCAGCAG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGAACGCTGTTGAATATTaGCGAATTTGTACAATAGGA +
Preference number: 4 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVNAVEY*RICTIG
Trigger: TCCTATTGTACAAATTCGCCAATATTCAACAGCGTT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTGTGTACAGTCATAGATCTTGTCTTCTTGTCCATGGGCAGAGAAAATATGCTGAACGCTGTTGAATATTaGCGAATTTGTACAATAGGA +
Preference number: 4 (lower is better)
Translates to: LCTVIDLVFLSMGRENMLNAVEY*RICTIG
Trigger: TCCTATTGTACAAATTCGCCAATATTCAACAGCGTT...CAGCATATTTTCTCTGCCCATGGACAAGAAGACAAGATCTATGACTGTACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CCA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATCAGAGTTTGCATTCATaGTTCAGTCCTTCATCAATC +
Preference number: 4 (lower is better)
Translates to: WLREIIKENLEHSKLQMYQSLHS*FSPSSI
Trigger: GATTGATGAAGGACTGAACCATGAATGCAAACTCTG...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTTGTCTTCTTGTCCATaGGCAGAGAAAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILSSCP*AEKICC
Trigger: GCAGCATATTTTCTCTGCCCATGGACAAGAAGACAA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR CAA 72 bp CAAGAATTTGGCTGCGTGAAATCATTAAGGAAAACCTaGAACACTCAAAGCTTCAAATGTATCCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QEFGCVKSLRKT*NTQSFKCIQGK
Trigger: TTTTCCCTGGATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCAAATTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR TCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCAAACCATCTGACACTTaGTGCATTGATAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIKPSDT*CIDRSS
Trigger: AGAAGACCTATCAATGCATCAAGTGTCAGATGGTTT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGCATGTTCCCTTTTTGTaGCACAAAATCAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRHVPFL*HKINSP
Trigger: AGGAGAATTGATTTTGTGGCACAAAAAGGGAACATG...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCAACAAAATGATCGCATaGAAGGCTTTGCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSINKMIA*KALLQN
Trigger: GTTCTGTAGCAAAGCCTTCCATGCGATCATTTTGTT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTTCTGCAGCTCTGTTTaGAAGAAAAACTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIFCSSV*KKNFCG
Trigger: TCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTCAAGACTCTTACTATaGGTGACTTTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSISRLLL*VTLCSV
Trigger: TACTGAACACAAAGTCACGCATAGTAAGAGTCTTGA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
3UTR CAA 72 bp ACAACTATTGCATATATAGTGATGCTACCTGTCACATaGCAAGGCTTACAAATATATATATACGGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: TTIAYIVMLPVT*QGLQIYIYGPY
Trigger: ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCACTATATATGCAATAGTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR GCA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTGCTGCAACTTGTTTaGTTGAACAAATACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILLQLV*LNKYCK
Trigger: TTTACAGTATTTGTTCAAGCAAACAAGTTGCAGCAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS CCA 90 bp CTGGCCCAAGCCTGGTCTATTCGTGCCGGGAGGGACGTTAATGCCTaGGCTGGCGCTCTTACTGAGATTCACGCAGCCGGCACACAGACC +
Preference number: 5 (lower is better)
Translates to: LAQAWSIRAGRDVNA*AGALTEIHAAGTQT
Trigger: GGTCTGTGTGCCGGCTGCGTGAATCTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCTCCCGGCACGAATAGACCAGGCTTGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS TCA 90 bp GGTTGGAATCTGGAGTCGTACTGGACACGGAGGTATAGCCCACCGTaGCCAGGGAAGGGCTGTTGCTGTGATTGCATGACTCCGGTTGCT +
Preference number: 5 (lower is better)
Translates to: GWNLESYWTRRYSPP*PGKGCCCDCMTPVA
Trigger: AGCAACCGGAGTCATGCAATCACAGCAACAGCCCTTCCCTGGTCACGGTGGGCTATACCTCCGTGTCCAGTACGACTCCAGATTCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp TCTTCCTCCCTCGACTCTTTGGGATTGGCGGGGCAGCTTCCACCATaGTTGAGCTGTCCACTGAGAGGTTGGAATCTGGAGTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: SSSLDSLGLAGQLPP*LSCPLRGWNLESYW
Trigger: CCAGTACGACTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 90 bp CCGTACATAGGCTCAGAGGTGTCAACGTCTTCTTCGCTCCCATCGTaGCTGTTGTGGGACTCCTGGCTGTTGGTCAGCAAAGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PYIGSEVSTSSSLPS*LLWDSWLLVSKVCS
Trigger: GCTGCAGACTTTGCTGACCAACAGCCAGGAGTCCCACAACAGTCACGATGGGAGCGAAGAAGACGTTGACACCTCTGAGCCTATGTACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp TCCTCATCCGACTGGGAGGGACTGATTCTGGGCATTGGTGATACTTaGGGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGCACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSSDWEGLILGIGDT*GVFNCVLLLSGTSS
Trigger: AGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTACATCCTGCAAGGTCTaGGACTGCGCTGTCGCTCCG +
Preference number: 5 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGTSCKV*DCAVAP
Trigger: CGGAGCGACAGCGCAGTCCAAGACCTTGCAGGATGT...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS TCA 90 bp ATGAGTTCTTCTTCTCCCCGCTATGCACCTGCTCCATGTGGTTCATaGGGGAGGTCTCCTCTACGAAGAGCTCGTGGCAGTAGACACACT +
Preference number: 5 (lower is better)
Translates to: MSSSSPRYAPAPCGS*GRSPLRRARGSRHT
Trigger: AGTGTGTCTACTGCCACGAGCTCTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 90 bp GGTCTTCTTCTCATCCGACTGGGAGGGACTGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GLLLIRLGGTDSGHW*YLGRFQLCAVAVWH
Trigger: GTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAGAAGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 90 bp TGGAACGTCCCATGGATTTTGAGTTCCAAGGTGGAGGTCACTGTCTaGATGCACACCACGCAGCGAAAGCCTGTCAGGGAATTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: WNVPWILSSKVEVTV*MHTTQRKPVREFLK
Trigger: CTTGAGGAATTCCCTGACAGGCTTTCGCTGCGTGGTGTGCATGCAGACAGTGACCTCCACCTTGGAACTCAAAATCCATGGGACGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp GTAGCTGAGGCGGCTAAACGACTTGTCACAGAATTGACACGGGTATaGAAGCCCAGGGCCACCTTCTTCCTCTCCAAAATCGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: VAEAAKRLVTELTRV*KPRATFFLSKIATF
Trigger: GAAGGTTGCGATTTTGGAGAGGAAGAAGGTGGCCCTGGGCTTCCATACCCGTGTCAATTCTGTGACAAGTCGTTTAGCCGCCTCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577720.1
ENST00000577801.5
ENST00000580488.1
ENST00000581869.1
ENST00000584787.5
CDS CCA 90 bp ACTGACTGCACTTCTGAGTGTCCTTCATCTTCCAGTCCTCCATCCTaGAACCGGACTGAGAGCCGTCCTTGTTCCTCTCATGAACCTGCA +
Preference number: 5 (lower is better)
Translates to: TDCTSECPSSSSPPS*NRTESRPCSSHEPA
Trigger: TGCAGGTTCATGAGAGGAACAAGGACGGCTCTCAGTCCGGTTCCAGGATGGAGGACTGGAAGATGAAGGACACTCAGAAGTGCAGTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp TTCTCATCCGACTGGGAGGGACTGATTCTGGGCATTGGTGATACTTaGGGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGCACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: FSSDWEGLILGIGDT*GVFNCVLLLSGTSS
Trigger: AGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCGCTCGGTCCTCATTaGGGGAGCATTCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPLGPH*GSIRGG
Trigger: GCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS TCA 90 bp GACAATATCCTCATCCGACTGGGAGGGACTGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DNILIRLGGTDSGHW*YLGRFQLCAVAVWH
Trigger: GTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAGGATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS GCA 90 bp TCAGAACAAATGCTGCATGAGTTCTTCTTCTCCCCGCTATGCACCTaGTCCATGTGGTTCATGAGGGAGGTCTCCTCTACGAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SEQMLHEFFFSPLCT*SMWFMREVSSTKSS
Trigger: CGAGCTCTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp CACACCACGCAGCGAAAGCCTGTCAGGGAATTCCTCAAGTCAGGGTaGATTTGGCAATGCTCTAAAAACTCCTCTTCACTCTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: HTTQRKPVREFLKSG*IWQCSKNSSSLWRG
Trigger: GCCTCTCCAGAGTGAAGAGGAGTTTTTAGAGCATTGCCAAATGCACCCTGACTTGAGGAATTCCCTGACAGGCTTTCGCTGCGTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp GCTGGCGCTCTTACTGAGATTCACGCAGCCGGCACACAGACCATATaGCAGGCCATTGATATCAAGTTTCACCAGATCTTGCTTGGAACG +
Preference number: 5 (lower is better)
Translates to: AGALTEIHAAGTQTI*QAIDIKFHQILLGT
Trigger: CGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCTGTGTGCCGGCTGCGTGAATCTCAGTAAGAGCGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS TCA 90 bp GTCCCAAGCACTGGAGACCCAAATCGGGAGCCACTGAGGTCACAATaGACCTGTCTAATATGCTCTTCCAGGGAAGAGTCAGTGAGAAAC +
Preference number: 5 (lower is better)
Translates to: VPSTGDPNREPLRSQ*TCLICSSREESVRN
Trigger: GTTTCTCACTGACTCTTCCCTGGAAGAGCATATTAGACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTGGGTCTCCAGTGCTTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp GTTTTTGGAGGTCTTCCGGGAAGTCAAAGCCTTCCTCACACTGACTaGACTTCTGAGTGTCCTTCATCTTCCAGTCCTCCATCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VFGGLPGSQSLPHTD*TSECPSSSSPPSWN
Trigger: GTTCCAGGATGGAGGACTGGAAGATGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAGGCTTTGACTTCCCGGAAGACCTCCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp CAGATATATTCTCCAGTGGGACGTGCAGGTGCACCTCCTACTGCCTaGATCATCTTAAGAGATGTCTGCTCTATGGCCACAGGAGATAGG +
Preference number: 5 (lower is better)
Translates to: QIYSPVGRAGAPPTA*IILRDVCSMATGDR
Trigger: CCTATCTCCTGTGGCCATAGAGCAGACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAATATATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp CTGTTGGTCAGCAAAGTCTGCAGCTCCACTTCCTCTTTCTGCACTTaGTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTCTTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: LLVSKVCSSTSSFCT*SEAPFVPQLGVLVS
Trigger: CGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp GGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGCACGAGCTCTCGGTaGATGGTTTGGATGTGGTTCTGGAGTTCACTTTCAGACTCAAAC +
Preference number: 5 (lower is better)
Translates to: GVFNCVLLLSGTSSR*MVWMWFWSSLSDSN
Trigger: GTTTGAGTCTGAAAGTGAACTCCAGAACCACATCCAAACCATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS-3UTR CAA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTACATCCTGCAAGGTCTaGGACTGCGCTGTCGCTCCG +
Preference number: 5 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFTSCKV*DCAVAP
Trigger: CGGAGCGACAGCGCAGTCCAAGACCTTGCAGGATGT...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCCGCTCGGTCCTCATTaGGGGAGCATTCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNPLGPH*GSIRGG
Trigger: GCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCCGCTCGGTCCTCATTaGGGGAGCATTCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNPLGPH*GSIRGG
Trigger: GCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTCTGTCCACTGAGAGGTaGGAATCTGGAGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: YGPYPAVGFCSVRTSLHGLSTER*ESGVVL
Trigger: CAGTACGACTCCAGATTCCAACCTCTCAGTGGACAG...ACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCATGTCAGGGGTTTGTaGAGCGGCCCTCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFHVRGL*SGPLPP
Trigger: GGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGGGGTCTGCAAGGTCTaGGACTGCGCTGTCGCTCCG +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNGVCKV*DCAVAP
Trigger: CGGAGCGACAGCGCAGTCCAAGACCTTGCAGACCCC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584787.5
CDS GCA 90 bp AAACTCTCAGAACAAATGCTGCATGAGTTCTTCTTCTCCCCGCTATaGACCTGCTCCATGTGGTTCATGAGGGAGGTCTCCTCTACGAAG +
Preference number: 5 (lower is better)
Translates to: KLSEQMLHEFFFSPL*TCSMWFMREVSSTK
Trigger: CTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp AAGTTTCACCAGATCTTGCTTGGAACGGAATTCTTTGAGGCAAGATaGGCACTTATACAGTTTTTGGACGTGCTGGCCCCGCCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: KFHQILLGTEFFEAR*ALIQFLDVLAPPCG
Trigger: ACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CCA 90 bp GTGCTGTTGCTGTCTGGCACGAGCTCTCGGTGGATGGTTTGGATGTaGTTCTGGAGTTCACTTTCAGACTCAAACTTAACGTTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: VLLLSGTSSRWMVWM*FWSSLSDSNLTLQL
Trigger: TAGCTGCAACGTTAAGTTTGAGTCTGAAAGTGAACTCCAGAACCACATCCAAACCATCCACCGAGAGCTCGTGCCAGACAGCAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATCCTCCCTCGACTCTTaGGGATTGGCGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTSSLDS*GLAGQL
Trigger: AAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGA...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATGCACTTATACAGTTTTaGGACGTGCTGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: VCLNKYCKADWTLEGASHALIQF*DVLAPP
Trigger: GGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGC...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS CCA 90 bp ACAAGAATAGACTTCTACTACTGGTTCTTTGGGAGTCCCAAGCACTaGAGACCCAAATCGGGAGCCACTGAGGTCACAATGAACCTGTCT +
Preference number: 5 (lower is better)
Translates to: TRIDFYYWFFGSPKH*RPKSGATEVTMNLS
Trigger: AGACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTATTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp TGCTCTATCAGGTGGCACTGGAGTTTGGCAGGAGAGTCAAAGGTCTaGCTGCAGAGTTTGCATTCATGGTTCAGTCCTTCATCAATCATG +
Preference number: 5 (lower is better)
Translates to: CSIRWHWSLAGESKV*LQSLHSWFSPSSIM
Trigger: CATGATTGATGAAGGACTGAACCATGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCTGATAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGCTCGGTTTCGCTTGCTaGCGGCGAGACATCCTGCAA +
Preference number: 5 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMLGFAC*RRDILQ
Trigger: TTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAG...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTCAGCTTCCACCATGGTaGAGCTGTCCACTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVQLPPW*SCPLRG
Trigger: ACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTG...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCTCGACTCTTTGGGATaGGCGGGGCAGCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRLDSLG*AGQLPP
Trigger: TGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACTCCTCCCTCGACTCTTaGGGATTGGCGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNSSLDS*GLAGQL
Trigger: AAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGA...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCATGTCAGGGGTTTGTaGAGCGGCCCTCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNHVRGL*SGPLPP
Trigger: GGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTAGTCATGTCAGGGGTTaGTTGAGCGGCCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVSHVRG*LSGPLP
Trigger: AGGAAGAGGGCCGCTCAACAAACCCCTGACATGACT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGAGTCATGTCAGGGGTTaGTTGAGCGGCCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQSHVRG*LSGPLP
Trigger: AGGAAGAGGGCCGCTCAACAAACCCCTGACATGACT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTCTCTGGAGAGGCATCTaGCAAATCCGGCAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESLWRGI*QIRQFP
Trigger: TGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAG...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCACTTATACAGTTTTaGGACGTGCTGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTALIQF*DVLAPP
Trigger: GGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGC...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTCTCTCGGTGGATGGTTaGGATGTGGTTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESLSVDG*DVVLEF
Trigger: GAACTCCAGAACCACATCCAAACCATCCACCGAGAG...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGAGGTGGCACTGGAGTTaGGCAGGAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQRWHWS*AGESKV
Trigger: GACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS TCA 90 bp CTCGGTTTCGCTTGCTTGCGGCGAGACATCCTAAAAGCAAACAGCTaGAGTTGTTTCAATTCAGCCCTGAAAGAAACTGCAAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LGFACLRRDILKANS*SCFNSALKETARSW
Trigger: CCAAGACCTTGCAGTTTCTTTCAGGGCTGAATTGAAACAACTTCAGCTGTTTGCTTTTAGGATGTCTCGCCGCAAGCAAGCGAAACCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538137.6
CDS TCA 90 bp GGCTTCGTTTGGCCTTGGCTCAGTTTCAAGACTTTTGATACGGAGTaGATAGGTTTTCATCAAGGCAGGCTCTCCAAGGAATGTGCGTCA +
Preference number: 5 (lower is better)
Translates to: GFVWPWLSFKTFDTE*IGFHQGRLSKECAS
Trigger: TGACGCACATTCCTTGGAGAGCCTGCCTTGATGAAAACCTATTCACTCCGTATCAAAAGTCTTGAAACTGAGCCAAGGCCAAACGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582584.1
CDS GCA 90 bp CTATCAGGTGGCACTGGAGTTTGGCAGGAGAGTCAAAGGTCTGGCTaGAGAGTTTGCATTCATGGTTCAGTCCTTCATCAATCATGTGAT +
Preference number: 5 (lower is better)
Translates to: LSGGTGVWQESQRSG*RVCIHGSVLHQSCD
Trigger: ATCACATGATTGATGAAGGACTGAACCATGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp GTGCCAAAGGACTCACCGCAGAAAATGCACTTATGCACTTTCCCTTaGTTTTCCAGGTGGTTGTGTTTCACATGGAGCTGCAAGTCAGTT +
Preference number: 5 (lower is better)
Translates to: VPKDSPQKMHLCTFP*FSRWLCFTWSCKSV
Trigger: AACTGACTTGCAGCTCCATGTGAAACACAACCACCTGGAAAACCAAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGTCCTTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAACTCGGTTTCGCTTGCTaGCGGCGAGACATCCTGCAA +
Preference number: 5 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKLGFAC*RRDILQ
Trigger: TTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAG...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATGGATCTCGGTTTCGCTaGCTTGCGGCGAGACATCCT +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNGSRFR*LAARHP
Trigger: AGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCC...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCGACTTGTCACAGAATaGACACGGGTATGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFRLVTE*TRVWKP
Trigger: GGGCTTCCATACCCGTGTCAATTCTGTGACAAGTCG...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACGATCTCGGCTGCGCTaGTGTTTGAACAGCCTACTG +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTRSRLR*CLNSLL
Trigger: CAGTAGGCTGTTCAAACACAAGCGCAGCCGAGATCG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCCTGTCCACTGAGAGGTaGGAATCTGGAGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRLSTER*ESGVVL
Trigger: CAGTACGACTCCAGATTCCAACCTCTCAGTGGACAG...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAACAGCTTCCACCATGGTaGAGCTGTCCACTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQQLPPW*SCPLRG
Trigger: ACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTG...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACTCGACTCTTTGGGATaGGCGGGGCAGCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIILDSLG*AGQLPP
Trigger: TGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATTCCTCCCTCGACTCTTaGGGATTGGCGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYSSLDS*GLAGQL
Trigger: AAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGA...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACATGTCAGGGGTTTGTaGAGCGGCCCTCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTHVRGL*SGPLPP
Trigger: GGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAGTCATGTCAGGGGTTaGTTGAGCGGCCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNSHVRG*LSGPLP
Trigger: AGGAAGAGGGCCGCTCAACAAACCCCTGACATGACT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCTCTCGGTGGATGGTTaGGATGTGGTTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQLSVDG*DVVLEF
Trigger: GAACTCCAGAACCACATCCAAACCATCCACCGAGAG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGATTCAACTGTGTGCTGTaGCTGTCTGGCACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LSSCGVLFCENISSWFARFNCVL*LSGTSS
Trigger: AGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAA...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTCAACTGTGTGCTGTaGCTGTCTGGCACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVFNCVL*LSGTSS
Trigger: AGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAAGCAGACTGGACACTaGAAGGTGCCTCCCATCCCT +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNKQTGH*KVPPIP
Trigger: AGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCTT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS TCA 90 bp CTTGGTGAAGCTATGCTGAGATTCCAGATCTCAGTAGTGTTGGCATaGGCGCTGGTCTCTTCAGTCATAGAGAAGACAATATCCTCATCC +
Preference number: 5 (lower is better)
Translates to: LGEAMLRFQISVVLA*ALVSSVIEKTISSS
Trigger: GGATGAGGATATTGTCTTCTCTATGACTGAAGAGACCAGCGCTCATGCCAACACTACTGAGATCTGGAATCTCAGCATAGCTTCACCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS TCA 90 bp CATCTCCAAAGGCTTCGTTTGGCCTTGGCTCAGTTTCAAGACTTTTaGTACGGAGTGAATAGGTTTTCATCAAGGCAGGCTCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: HLQRLRLALAQFQDF*YGVNRFSSRQALQG
Trigger: TCCTTGGAGAGCCTGCCTTGATGAAAACCTATTCACTCCGTATCAAAAGTCTTGAAACTGAGCCAAGGCCAAACGAAGCCTTTGGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582584.1
CDS GCA 90 bp GTACTTAGCACCACATTGATTACAGATATATTCTCCAGTGGGACGTaGAGGTGCACCTCCTACTGCCTGCATCATCTTAAGAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: VLSTTLITDIFSSGT*RCTSYCLHHLKRCL
Trigger: CAGACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAATATATCTGTAATCAATGTGGTGCTAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 90 bp GGCACTGGAGTTTGGCAGGAGAGTCAAAGGTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTTCATCAATCATGTGATTTGCAACAT +
Preference number: 5 (lower is better)
Translates to: GTGVWQESQRSGCRV*IHGSVLHQSCDLQH
Trigger: ATGTTGCAAATCACATGATTGATGAAGGACTGAACCATGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCCTGCCAAACTCCAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGATTACAGTTGGGGTCTTaGAGGGATCTCGGTTTCGCT +
Preference number: 5 (lower is better)
Translates to: LSSCGVLFCENISSWFARLQLGS*RDLGFA
Trigger: AGCGAAACCGAGATCCCTCAAAGACCCCAACTGTAA...TCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCGATCTCGGCTGCGCTaGTGTTTGAACAGCCTACTG +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRRSRLR*CLNSLL
Trigger: CAGTAGGCTGTTCAAACACAAGCGCAGCCGAGATCG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCTGGTTTTCCAGGTGGTaGTGTTTCACATGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRWFSRW*CFTWSC
Trigger: GCAGCTCCATGTGAAACACAACCACCTGGAAAACCA...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACACCCATTCCCTGTCTTTaGCATGTGGAACGTCCCATG +
Preference number: 5 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTPIPCL*HVERPM
Trigger: CATGGGACGTTCCACATGCAAAAGACAGGGAATGGG...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGGACTCAAACTTAACGTaGCAGCTAGAGCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: GLQIYIYGPYPAVGFCSVDSNLT*QLEQRV
Trigger: GACACGCTGCTCTAGCTGCAACGTTAAGTTTGAGTC...CACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGACTCAAACTTAACGTaGCAGCTAGAGCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVDSNLT*QLEQRV
Trigger: GACACGCTGCTCTAGCTGCAACGTTAAGTTTGAGTC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGAGGTGGCACTGGAGTTaGGCAGGAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRRWHWS*AGESKV
Trigger: GACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGAGGTGGCACTGGAGTTaGGCAGGAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVRWHWS*AGESKV
Trigger: GACCTTTGACTCTCCTGCCAAACTCCAGTGCCACCT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGAAGCAGACTGGACACTaGAAGGTGCCTCCCATCCCT +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVKQTGH*KVPPIP
Trigger: AGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCTT...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATAAGCAGACTGGACACTaGAAGGTGCCTCCCATCCCT +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNKQTGH*KVPPIP
Trigger: AGGGATGGGAGGCACCTTCAAGTGTCCAGTCTGCTT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS CCA 90 bp AGGACAGAAACCCACGGCGACAAATGGCACATTTATATGGCTTGTTaGACGTGTGAGTCTTTAAGTGGATCTTCAAGTGATCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: RTETHGDKWHIYMAC*TCESLSGSSSDHFW
Trigger: CCAGAAGTGATCACTTGAAGATCCACTTAAAGACTCACACGTCCAACAAGCCATATAAATGTGCCATTTGTCGCCGTGGGTTTCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577720.1
ENST00000577801.5
ENST00000584787.5
CDS CCA 90 bp TATTGGCGAATTTGTACAATAGGAACAAGAATAGACTTCTACTACTaGTTCTTTGGGAGTCCCAAGCACTGGAGACCCAAATCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: YWRICTIGTRIDFYY*FFGSPKHWRPKSGA
Trigger: GGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTATTCTTGTTCCTATTGTACAAATTCGCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp CTTCCTCTTTCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTTaGGTGTCTTGGTTTCGAATACACAGTGTTTTTCTCGCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LPLSALARKLHLFHS*VSWFRIHSVFLASV
Trigger: AACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATTACAGTTGGGGTCTTaGAGGGATCTCGGTTTCGCT +
Preference number: 5 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQLQLGS*RDLGFA
Trigger: AGCGAAACCGAGATCCCTCAAAGACCCCAACTGTAA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCGACTTGTCACAGAATaGACACGGGTATGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRRLVTE*TRVWKP
Trigger: GGGCTTCCATACCCGTGTCAATTCTGTGACAAGTCG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGACTTGTCACAGAATaGACACGGGTATGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVRLVTE*TRVWKP
Trigger: GGGCTTCCATACCCGTGTCAATTCTGTGACAAGTCG...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCTGCAGTGGTACTTCTaGTCCCCGGTGTGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRLQWYF*SPVWSF
Trigger: AAAACTCCACACCGGGGACAAGAAGTACCACTGCAG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCTGCAGTGGTACTTCTaGTCCCCGGTGTGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNLQWYF*SPVWSF
Trigger: AAAACTCCACACCGGGGACAAGAAGTACCACTGCAG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCAGCTTCCACCATGGTaGAGCTGTCCACTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYQLPPW*SCPLRG
Trigger: ACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTG...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTCGACTCTTTGGGATaGGCGGGGCAGCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILDSLG*AGQLPP
Trigger: TGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGAGGACAGGTCAATTTaGGAAGCACAGTGTCGAGAT +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVEDRSI*EAQCRD
Trigger: ATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAGCAAGGATTCTTGGTaGGGGAATTCCTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRSKDSW*GNSLLH
Trigger: GTGCAACAAGGAATTCCCCAACCAAGAATCCTTGCT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTGGTTTTCCAGGTGGTaGTGTTTCACATGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMWFSRW*CFTWSC
Trigger: GCAGCTCCATGTGAAACACAACCACCTGGAAAACCA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAGCTTTGCTACAGAACTaGCAGTTGTACTTCTTACTG +
Preference number: 5 (lower is better)
Translates to: ALSSCGVLFCENISSWFAALLQN*QLYFLL
Trigger: CAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAGC...TGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGATCGCATGGAAGGCTTaGCTACAGAACTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQIAWKA*LQNLQL
Trigger: CAACTGCAAGTTCTGTAGCAAAGCCTTCCATGCGAT...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAGCTCGGAAGCTCCATTaGTTCCACAGTTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQARKLH*FHSWVS
Trigger: AGACACCCAACTGTGGAACAAATGGAGCTTCCGAGC...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGCTCGGAAGCTCCATTaGTTCCACAGTTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRARKLH*FHSWVS
Trigger: AGACACCCAACTGTGGAACAAATGGAGCTTCCGAGC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGGCTCGGAAGCTCCATTaGTTCCACAGTTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVARKLH*FHSWVS
Trigger: AGACACCCAACTGTGGAACAAATGGAGCTTCCGAGC...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTTCCTCTTTCTGCACTaGCTCGGAAGCTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFFLFLH*LGSSIC
Trigger: ACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAA...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCTCTGGAGAGGCATCTaGCAAATCCGGCAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNLWRGI*QIRQFP
Trigger: TGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCTCTGGAGAGGCATCTaGCAAATCCGGCAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVLWRGI*QIRQFP
Trigger: TGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAG...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATCCCATTCCCTGTCTTTaGCATGTGGAACGTCCCATG +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNPIPCL*HVERPM
Trigger: CATGGGACGTTCCACATGCAAAAGACAGGGAATGGG...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGCCCATTCCCTGTCTTTaGCATGTGGAACGTCCCATG +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRPIPCL*HVERPM
Trigger: CATGGGACGTTCCACATGCAAAAGACAGGGAATGGG...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGGCACTTATACAGTTTTaGGACGTGCTGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRALIQF*DVLAPP
Trigger: GGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGC...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGACTCAAACTTAACGTaGCAGCTAGAGCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTDSNLT*QLEQRV
Trigger: GACACGCTGCTCTAGCTGCAACGTTAAGTTTGAGTC...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTCAACTGTGTGCTGTaGCTGTCTGGCACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQFNCVL*LSGTSS
Trigger: AGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS GCA 90 bp CACAGACCATATGGCAGGCCATTGATATCAAGTTTCACCAGATCTTaGTTGGAACGGAATTCTTTGAGGCAAGATGCGCACTTATACAGT +
Preference number: 5 (lower is better)
Translates to: HRPYGRPLISSFTRS*LERNSLRQDAHLYS
Trigger: ACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTCTTCAAGTTTACAGTaGGGGTCTTTGAGGGATCTC +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVSSSLQ*GSLRDL
Trigger: GAGATCCCTCAAAGACCCCAACTGTAAACTTGAAGA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAGAGTGTTGAGGTCGTaGACAACTTCGGAACAGAAG +
Preference number: 5 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMRVLRS*TTSEQK
Trigger: CTTCTGTTCCGAAGTTGTCAACGACCTCAACACTCT...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATCTACTACTGGTTCTTaGGGAGTCCCAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKSTTGS*GVPSTG
Trigger: TCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAAGCAAGGATTCTTGGTaGGGGAATTCCTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTSKDSW*GNSLLH
Trigger: GTGCAACAAGGAATTCCCCAACCAAGAATCCTTGCT...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACTTATGCACTTTCCCTaGGTTTTCCAGGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTLMHFP*VFQVVV
Trigger: CACAACCACCTGGAAAACCAAGGGAAAGTGCATAAG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACATCGCATGGAAGGCTTaGCTACAGAACTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNIAWKA*LQNLQL
Trigger: CAACTGCAAGTTCTGTAGCAAAGCCTTCCATGCGAT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGCCATTTGTTCCACAGTaGGGTGTCTTGGTTTCGAAT +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQPFVPQ*GVLVSN
Trigger: ATTCGAAACCAAGACACCCAACTGTGGAACAAATGG...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGAACGTCCCATGGATTTaGAGTTCCAAGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQNVPWI*SSKVEV
Trigger: GACCTCCACCTTGGAACTCAAAATCCATGGGACGTT...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGAACGTCCCATGGATTTaGAGTTCCAAGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRNVPWI*SSKVEV
Trigger: GACCTCCACCTTGGAACTCAAAATCCATGGGACGTT...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTTGGAACGGAATTCTTaGAGGCAAGATGCGCACTTA +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVLERNS*RQDAHL
Trigger: TAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAA...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACTCTCGGTGGATGGTTaGGATGTGGTTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIILSVDG*DVVLEF
Trigger: GAACTCCAGAACCACATCCAAACCATCCACCGAGAG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTGCTGTGTTGGGTCATaGTATGATTCTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMCCVGS*YDSAAL
Trigger: CAGAGCTGCAGAATCATACAATGACCCAACACAGCA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGCACTAACTGCTGTGTaGGGTCATTGTATGATTCTG +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVALTAV*GHCMIL
Trigger: CAGAATCATACAATGACCCAACACAGCAGTTAGTGC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS GCA 90 bp GCAATGGGGACAAAAGAATGCATTACTATCTTTAGCTGCAGGGTTTaGAAATCCATGAGAACATCGGATGTGTTCCTGAAGAGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: AMGTKECITIFSCRV*KSMRTSDVFLKSVE
Trigger: CTCAACACTCTTCAGGAACACATCCGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAAGATAGTAATGCATTCTTTTGTCCCCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp TCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTCTTaGTTTCGAATACACAGTGTTTTTCTCGCAAGTGTTTTTCTAACA +
Preference number: 5 (lower is better)
Translates to: SALARKLHLFHSWVS*FRIHSVFLASVFLT
Trigger: TGTTAGAAAAACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATCTTCAAGTTTACAGTaGGGGTCTTTGAGGGATCTC +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTSSSLQ*GSLRDL
Trigger: GAGATCCCTCAAAGACCCCAACTGTAAACTTGAAGA...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGATCTCGGCTGCGCTaGTGTTTGAACAGCCTACTG +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIRSRLR*CLNSLL
Trigger: CAGTAGGCTGTTCAAACACAAGCGCAGCCGAGATCG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACAGTAGGTAACTTTTGCTaGTTTACTCGAGGGACCAGT +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTVGNFC*FTRGTS
Trigger: ACTGGTCCCTCGAGTAAACAAGCAAAAGTTACCTAC...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACATCTACTACTGGTTCTTaGGGAGTCCCAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTSTTGS*GVPSTG
Trigger: TCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGA...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGAGGACAGGTCAATTTaGGAAGCACAGTGTCGAGAT +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIREDRSI*EAQCRD
Trigger: ATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACCTTCAGCAAGGATTCTaGGTTGGGGAATTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNLQQGF*VGEFLV
Trigger: AACAAGGAATTCCCCAACCAAGAATCCTTGCTGAAG...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCTTATGCACTTTCCCTaGGTTTTCCAGGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: IRRHNTCATLYIQGVYPVLMHFP*VFQVVV
Trigger: CACAACCACCTGGAAAACCAAGGGAAAGTGCATAAG...CACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGCTTTGCTACAGAACTaGCAGTTGTACTTCTTACTG +
Preference number: 5 (lower is better)
Translates to: TRGLSGAQKFKHMNIQQFALLQN*QLYFLL
Trigger: CAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAGC...AAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTGCTTTGCTACAGAACTaGCAGTTGTACTTCTTACTG +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVALLQN*QLYFLL
Trigger: CAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAGC...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACACCATTTGTTCCACAGTaGGGTGTCTTGGTTTCGAAT +
Preference number: 5 (lower is better)
Translates to: IYKGSIRCAKVQTHEHPTPFVPQ*GVLVSN
Trigger: ATTCGAAACCAAGACACCCAACTGTGGAACAAATGG...TGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGTTCCTCTTTCTGCACTaGCTCGGAAGCTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQFLFLH*LGSSIC
Trigger: ACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAA...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTTCCTCTTTCTGCACTaGCTCGGAAGCTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRFLFLH*LGSSIC
Trigger: ACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAA...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTGGAACGGAATTCTTaGAGGCAAGATGCGCACTTA +
Preference number: 5 (lower is better)
Translates to: IARLTNIYIRALSSCGVLLERNS*RQDAHL
Trigger: TAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAA...CAGAACCCCACAGCTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAATTCACCAGATCTTGCTaGGAACGGAATTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQFTRSC*ERNSLR
Trigger: CCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAA...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp CCAGCTGTGGGGTTCTGTTCTGTGAGAACATCTCTTCATGGTTTGCAAGAATCTAAGTTTCACCAGATCTaGCTTGGAACGGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: PAVGFCSVRTSLHGLQESKFHQI*LGTEFF
Trigger: AAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTT...AGATTCTTGCAAACCATGAAGAGATGTTCTCACAGAACAGAACCCCACAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATCCAGTGCTGTGTTGGGTCATaGTATGATTCTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CYLSHCKAYKYIYTGLIQCCVGS*YDSAAL
Trigger: CAGAGCTGCAGAATCATACAATGACCCAACACAGCA...CTGGATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp CATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTGCTGTGTTGGGTCATaGTATGATTCTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: HNTCATLYIQGVYPVRKSCCVGS*YDSAAL
Trigger: CAGAGCTGCAGAATCATACAATGACCCAACACAGCA...ACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGCACTAACTGCTGTGTaGGGTCATTGTATGATTCTG +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNALTAV*GHCMIL
Trigger: CAGAATCATACAATGACCCAACACAGCAGTTAGTGC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GCACTAACTGCTGTGTTGGGTCATTGTATGATTCTGCAGCTCTGTTTGGAAGAACTGACACTTGATGCATaGATAGGTCTTCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: ALTAVLGHCMILQLCLEELTLDA*IGLLGE
Trigger: TTCACCAAGAAGACCTATCAATGCATCAAGTGTCAG...TTCTTCCAAACAGAGCTGCAGAATCATACAATGACCCAACACAGCAGTTAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCTGTCCACTGAGAGGTaGGAATCTGGAGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSILSTER*ESGVVL
Trigger: CAGTACGACTCCAGATTCCAACCTCTCAGTGGACAG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGGTAGGTAACTTTTGCTaGTTTACTCGAGGGACCAGT +
Preference number: 5 (lower is better)
Translates to: VSDDIIHVQHFIYKGSIRVGNFC*FTRGTS
Trigger: ACTGGTCCCTCGAGTAAACAAGCAAAAGTTACCTAC...CCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAAGAGTGTTGAGGTCGTaGACAACTTCGGAACAGAAG +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTRVLRS*TTSEQK
Trigger: CTTCTGTTCCGAAGTTGTCAACGACCTCAACACTCT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACAAGCAAGGATTCTTGGTaGGGGAATTCCTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTSKDSW*GNSLLH
Trigger: GTGCAACAAGGAATTCCCCAACCAAGAATCCTTGCT...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAACTTCAGCAAGGATTCTaGGTTGGGGAATTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQLQQGF*VGEFLV
Trigger: AACAAGGAATTCCCCAACCAAGAATCCTTGCTGAAG...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAACTTCAGCAAGGATTCTaGGTTGGGGAATTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKLQQGF*VGEFLV
Trigger: AACAAGGAATTCCCCAACCAAGAATCCTTGCTGAAG...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATTGGTTTTCCAGGTGGTaGTGTTTCACATGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WLREIIKENLEHSKLQMYWFSRW*CFTWSC
Trigger: GCAGCTCCATGTGAAACACAACCACCTGGAAAACCA...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACTTATGCACTTTCCCTaGGTTTTCCAGGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTLMHFP*VFQVVV
Trigger: CACAACCACCTGGAAAACCAAGGGAAAGTGCATAAG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAATCGCATGGAAGGCTTaGCTACAGAACTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIIAWKA*LQNLQL
Trigger: CAACTGCAAGTTCTGTAGCAAAGCCTTCCATGCGAT...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACCACAGTTGGGTGTCTaGGTTTCGAATACACAGTGT +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIPQLGV*VSNTQC
Trigger: ACACTGTGTATTCGAAACCAAGACACCCAACTGTGG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACCACAGTTGGGTGTCTaGGTTTCGAATACACAGTGT +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTPQLGV*VSNTQC
Trigger: ACACTGTGTATTCGAAACCAAGACACCCAACTGTGG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAATTGGAACGGAATTCTTaGAGGCAAGATGCGCACTTA +
Preference number: 5 (lower is better)
Translates to: IHVQHFIYKGSIRCAKVQLERNS*RQDAHL
Trigger: TAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAA...TTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATTTCACCAGATCTTGCTaGGAACGGAATTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNFTRSC*ERNSLR
Trigger: CCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAA...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AATATATATATACGGGCCTTATCCAGCTGTGGGGTTCTGTTCTGTGAGAACATCCTGACACTTGATGCATaGATAGGTCTTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: NIYIRALSSCGVLFCENILTLDA*IGLLLI
Trigger: GATGAGAAGAAGACCTATCAATGCATCAAGTGTCAG...GATGTTCTCACAGAACAGAACCCCACAGCTGGATAAGGCCCGTATATATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTATAGATCTTGTCTTCTaGTCCATGGGCAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: YKGSIRCAKVQTHEHPTVIDLVF*SMGREN
Trigger: ATTTTCTCTGCCCATGGACAAGAAGACAAGATCTAT...AACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCATAGATCTTGTCTTCTaGTCCATGGGCAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRIDLVF*SMGREN
Trigger: ATTTTCTCTGCCCATGGACAAGAAGACAAGATCTAT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACGCACTAACTGCTGTGTaGGGTCATTGTATGATTCTG +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNALTAV*GHCMIL
Trigger: CAGAATCATACAATGACCCAACACAGCAGTTAGTGC...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTG +
Preference number: 5 (lower is better)
Translates to: CNTLYTRGLSGAQKFKHMSPSSV*SSSLQL
Trigger: CAACTGTAAACTTGAAGACAAGACTGAAGATGGAGA...CATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACACTCCATCTGTCAGTaGACATTGATTAATCTTGTG +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTHSICQ*TLINLV
Trigger: CACAAGATTAATCAATGTCAACTGACAGATGGAGTG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCGTACTTAGCACCACATaGATTACAGATATATTCTCC +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRVLSTT*ITDIFS
Trigger: GGAGAATATATCTGTAATCAATGTGGTGCTAAGTAC...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGGTACTTAGCACCACATaGATTACAGATATATTCTCC +
Preference number: 5 (lower is better)
Translates to: YTRGLSGAQKFKHMNIQQVLSTT*ITDIFS
Trigger: GGAGAATATATCTGTAATCAATGTGGTGCTAAGTAC...CTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACACCATTTGTTCCACAGTaGGGTGTCTTGGTTTCGAAT +
Preference number: 5 (lower is better)
Translates to: LSGAQKFKHMNIQQFDNTPFVPQ*GVLVSN
Trigger: ATTCGAAACCAAGACACCCAACTGTGGAACAAATGG...TGTATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCAACGTCCCATGGATTTaGAGTTCCAAGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSINVPWI*SSKVEV
Trigger: GACCTCCACCTTGGAACTCAAAATCCATGGGACGTT...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACAAGTTTCACCAGATCTaGCTTGGAACGGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNKFHQI*LGTEFF
Trigger: AAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTT...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAACTGACACTTGATGCATaGATAGGTCTTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKLTLDA*IGLLLI
Trigger: GATGAGAAGAAGACCTATCAATGCATCAAGTGTCAG...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000584787.5
CDS-3UTR CAA 90 bp GTTTGCTTGAACAAATACTGTAAAGCAGACTGGACACTTGAAGGTGCCTCCCATAAACTTCTGTGGACATaGTGTACAGTCATAGATCTT +
Preference number: 5 (lower is better)
Translates to: VCLNKYCKADWTLEGASHKLLWT*CTVIDL
Trigger: AAGATCTATGACTGTACACAATGTCCACAGAAGTTT...ATGGGAGGCACCTTCAAGTGTCCAGTCTGCTTTACAGTATTTGTTCAAGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp AGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAACTTCTGTGGACATaGTGTACAGTCATAGATCTT +
Preference number: 5 (lower is better)
Translates to: RRHNTCATLYIQGVYPVRKLLWT*CTVIDL
Trigger: AAGATCTATGACTGTACACAATGTCCACAGAAGTTT...GCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACACAAAATCAATTCTCCTaGAGAGACTGTACTTGCACT +
Preference number: 5 (lower is better)
Translates to: CATLYIQGVYPVRKSSNTQNQFS*RDCTCT
Trigger: AGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTTG...TGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp CTTCTTGTCCATGGGCAGAGAAAATATGCTGCTGCAACTTGTTTGCTTGAACAACAAAATCAATTCTCCTaGAGAGACTGTACTTGCACT +
Preference number: 5 (lower is better)
Translates to: LLVHGQRKYAAATCLLEQQNQFS*RDCTCT
Trigger: AGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTTG...TTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACCACTCCATCTGTCAGTaGACATTGATTAATCTTGTG +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNHSICQ*TLINLV
Trigger: CACAAGATTAATCAATGTCAACTGACAGATGGAGTG...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATGTAGGTAACTTTTGCTaGTTTACTCGAGGGACCAGT +
Preference number: 5 (lower is better)
Translates to: WLREIIKENLEHSKLQMYVGNFC*FTRGTS
Trigger: ACTGGTCCCTCGAGTAAACAAGCAAAAGTTACCTAC...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp ACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACGCAGAACTGCAAGACTaGAAAATAATTGTTTGTTGC +
Preference number: 5 (lower is better)
Translates to: TCATLYIQGVYPVRKSSNAELQD*KIIVCC
Trigger: GCAACAAACAATTATTTTCAAGTCTTGCAGTTCTGC...GTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCGAGGACAGGTCAATTTaGGAAGCACAGTGTCGAGAT +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIEDRSI*EAQCRD
Trigger: ATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTC...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS TCA 90 bp CAAATATGGGCCTGTTCTGGCTTATCTAAGTGCATAGTTTTCAGGTaGATCTGCAGAACTGCAAGACTTGAAAATAATTGTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: QIWACSGLSKCIVFR*ICRTARLENNCLLQ
Trigger: CTGCAACAAACAATTATTTTCAAGTCTTGCAGTTCTGCAGATTCACCTGAAAACTATGCACTTAGATAAGCCAGAACAGGCCCATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 90 bp AATCTAGTGCCTCTCCATCTTCAGTCTTGTCTTCAAGTTTACAGTTaGGGTCTGAAAAATATCAACACTGTAAGTATGGGGTTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: NLVPLHLQSCLQVYS*GLKNINTVSMGFKD
Trigger: GTCTTTAAACCCCATACTTACAGTGTTGATATTTTTCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583398.1
CDS-3UTR CAA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTG +
Preference number: 5 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYSPSSV*SSSLQL
Trigger: CAACTGTAAACTTGAAGACAAGACTGAAGATGGAGA...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATATCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTG +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIISPSSV*SSSLQL
Trigger: CAACTGTAAACTTGAAGACAAGACTGAAGATGGAGA...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATACACTCCATCTGTCAGTaGACATTGATTAATCTTGTG +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIHSICQ*TLINLV
Trigger: CACAAGATTAATCAATGTCAACTGACAGATGGAGTG...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATGCAGAACTGCAAGACTaGAAAATAATTGTTTGTTGC +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNAELQD*KIIVCC
Trigger: GCAACAAACAATTATTTTCAAGTCTTGCAGTTCTGC...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp AACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACTTCTCTTTGATATGCTaGTTCAGTTTAAGAACGCTG +
Preference number: 5 (lower is better)
Translates to: NTLYTRGLSGAQKFKHMNFSLIC*FSLRTL
Trigger: CAGCGTTCTTAAACTGAACAAGCATATCAAAGAGAA...GTTCATGTGTTTGAACTTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCGGTGCGCAAAATTCTCTTTGATATGCTaGTTCAGTTTAAGAACGCTG +
Preference number: 5 (lower is better)
Translates to: DIIHVQHFIYKGSIRCAKFSLIC*FSLRTL
Trigger: CAGCGTTCTTAAACTGAACAAGCATATCAAAGAGAA...TTTTGCGCACCGGATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCTTCACCAGATCTTGCTaGGAACGGAATTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIFTRSC*ERNSLR
Trigger: CCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAA...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGGCCCAAGTCCACTTGTCTTTATAAGACCATTTTAGTATCAGACGACATAATAAAGTTTCACCAGATCTaGCTTGGAACGGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: GPKSTCLYKTILVSDDIIKFHQI*LGTEFF
Trigger: AAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTT...TATTATGTCGTCTGATACTAAAATGGTCTTATAAAGACAAGTGGACTTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS-3UTR CAA 90 bp GGTCTATCCGGTGCGCAAAAGTTCAAACACATGAACATCCAACAGTTTGATAATACATCTCTTCATGGTTaGCAAGAATCTTCAGCAATA +
Preference number: 5 (lower is better)
Translates to: GLSGAQKFKHMNIQQFDNTSLHG*QESSAI
Trigger: TATTGCTGAAGATTCTTGCAAACCATGAAGAGATGT...ATTATCAAACTGTTGGATGTTCATGTGTTTGAACTTTTGCGCACCGGATAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATATAGATCTTGTCTTCTaGTCCATGGGCAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: WLREIIKENLEHSKLQMYIDLVF*SMGREN
Trigger: ATTTTCTCTGCCCATGGACAAGAAGACAAGATCTAT...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp GTGATGCTACCTGTCACATTGCAAGGCTTACAAATATATATATACGGGCCTTATAAACTTCTGTGGACATaGTGTACAGTCATAGATCTT +
Preference number: 5 (lower is better)
Translates to: VMLPVTLQGLQIYIYGPYKLLWT*CTVIDL
Trigger: AAGATCTATGACTGTACACAATGTCCACAGAAGTTT...ATAAGGCCCGTATATATATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TGGCTGCGTGAAATCATTAAGGAAAACCTTGAACACTCAAAGCTTCAAATGTATTTCTCTTTGATATGCTaGTTCAGTTTAAGAACGCTG +
Preference number: 5 (lower is better)
Translates to: WLREIIKENLEHSKLQMYFSLIC*FSLRTL
Trigger: CAGCGTTCTTAAACTGAACAAGCATATCAAAGAGAA...ATACATTTGAAGCTTTGAGTGTTCAAGGTTTTCCTTAATGATTTCACGCAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp ACATACAGGTTAGTTCAACTGATTCAAGAATTTGGCTGCGTGAAATCATTAAGGGTACTTAGCACCACATaGATTACAGATATATTCTCC +
Preference number: 5 (lower is better)
Translates to: TYRLVQLIQEFGCVKSLRVLSTT*ITDIFS
Trigger: GGAGAATATATCTGTAATCAATGTGGTGCTAAGTAC...CCTTAATGATTTCACGCAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361524.8
CDS-3UTR CAA 90 bp TTAGTATCAGACGACATAATACATGTGCAACACTTTATATACAAGGGGTCTATCCAAAATCAATTCTCCTaGAGAGACTGTACTTGCACT +
Preference number: 5 (lower is better)
Translates to: LVSDDIIHVQHFIYKGSIQNQFS*RDCTCT
Trigger: AGTGCAAGTACAGTCTCTCAAGGAGAATTGATTTTG...GATAGACCCCTTGTATATAAAGTGTTGCACATGTATTATGTCGTCTGATACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000584787.5
CDS CCA 72 bp GCCTGGTCTATTCGTGCCGGGAGGGACGTTAATGCCTaGGCTGGCGCTCTTACTGAGATTCACGCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: AWSIRAGRDVNA*AGALTEIHAAG
Trigger: GCCGGCTGCGTGAATCTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCTCCCGGCACGAATAGACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp GTTGAGCGGCCCTCTTCCTCCCTCGACTCTTTGGGATaGGCGGGGCAGCTTCCACCATGGTTGAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: VERPSSSLDSLG*AGQLPPWLSCP
Trigger: TGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp GGGTTTGTTGAGCGGCCCTCTTCCTCCCTCGACTCTTaGGGATTGGCGGGGCAGCTTCCACCATGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: GFVERPSSSLDS*GLAGQLPPWLS
Trigger: GCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp CAGGGGTTTGTTGAGCGGCCCTCTTCCTCCCTCGACTCTTTGGGATaGGCGGGGCAGCTTCCACCATGGTTGAGCTGTCCACTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: QGFVERPSSSLDSLG*AGQLPPWLSCPLRG
Trigger: ACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp GGCAGTAGACACACTGGAGGGCCGCTCGGTCCTCATTaGGGGAGCATTCGGGGTGGCACTCTGCAATGTGTT +
Preference number: 6 (lower is better)
Translates to: GSRHTGGPLGPH*GSIRGGTLQCV
Trigger: AACACATTGCAGAGTGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGGCCCTCCAGTGTGTCTACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp TCATGTCAGGGGTTTGTTGAGCGGCCCTCTTCCTCCCTCGACTCTTaGGGATTGGCGGGGCAGCTTCCACCATGGTTGAGCTGTCCACTG +
Preference number: 6 (lower is better)
Translates to: SCQGFVERPSSSLDS*GLAGQLPPWLSCPL
Trigger: CAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp GCAGTAGACACACTGGAGGGCCGCTCGGTCCTCATTTaGGGAGCATTCGGGGTGGCACTCTGCAATGTGTTT +
Preference number: 6 (lower is better)
Translates to: AVDTLEGRSVLI*GAFGVALCNVF
Trigger: AAACACATTGCAGAGTGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGGCCCTCCAGTGTGTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp CAGTTGGGGTCTTTGAGGGATCTCGGTTTCGCTTGCTaGCGGCGAGACATCCTGCAAGGTCTTGGACTGCGC +
Preference number: 6 (lower is better)
Translates to: QLGSLRDLGFAC*RRDILQGLGLR
Trigger: GCGCAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGACCCCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361524.8
ENST00000399425.6
CDS CAA 72 bp AGTCCCACACCTTTGAGGGATCTCGGTTTCGCTTGCTaGCGGCGAGACATCCTGCAAGGTCTTGGACTGCGC +
Preference number: 6 (lower is better)
Translates to: SPTPLRDLGFAC*RRDILQGLGLR
Trigger: GCGCAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGGTGTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583005.5
CDS CAA 90 bp TCCTCCCTCGACTCTTTGGGATTGGCGGGGCAGCTTCCACCATGGTaGAGCTGTCCACTGAGAGGTTGGAATCTGGAGTCGTACTGGACA +
Preference number: 6 (lower is better)
Translates to: SSLDSLGLAGQLPPW*SCPLRGWNLESYWT
Trigger: TGTCCAGTACGACTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp TCTTCTCCCCGCTATGCACCTGCTCCATGTGGTTCATaGGGGAGGTCTCCTCTACGAAGAGCTCGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SSPRYAPAPCGS*GRSPLRRARGS
Trigger: ACTGCCACGAGCTCTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp CTGGAGTCGTACTGGACACGGAGGTATAGCCCACCGTaGCCAGGGAAGGGCTGTTGCTGTGATTGCATGACT +
Preference number: 6 (lower is better)
Translates to: LESYWTRRYSPP*PGKGCCCDCMT
Trigger: AGTCATGCAATCACAGCAACAGCCCTTCCCTGGTCACGGTGGGCTATACCTCCGTGTCCAGTACGACTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp CTCGACTCTTTGGGATTGGCGGGGCAGCTTCCACCATaGTTGAGCTGTCCACTGAGAGGTTGGAATCTGGAG +
Preference number: 6 (lower is better)
Translates to: LDSLGLAGQLPP*LSCPLRGWNLE
Trigger: CTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp TTGCCTTTCCCCTCAATGGCACTCAGATTCTCATTCTaGCCCAAGCCTGGTCTATTCGTGCCGGGAGGGACG +
Preference number: 6 (lower is better)
Translates to: LPFPSMALRFSF*PKPGLFVPGGT
Trigger: CGTCCCTCCCGGCACGAATAGACCAGGCTTGGGCCAGAATGAGAATCTGAGTGCCATTGAGGGGAAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp GACTCTTTGGGATTGGCGGGGCAGCTTCCACCATGGTaGAGCTGTCCACTGAGAGGTTGGAATCTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: DSLGLAGQLPPW*SCPLRGWNLES
Trigger: CGACTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTGCCCCGCCAATCCCAAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp GGCTCAGAGGTGTCAACGTCTTCTTCGCTCCCATCGTaGCTGTTGTGGGACTCCTGGCTGTTGGTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: GSEVSTSSSLPS*LLWDSWLLVSK
Trigger: TTTGCTGACCAACAGCCAGGAGTCCCACAACAGTCACGATGGGAGCGAAGAAGACGTTGACACCTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp TGGGCATTGGTGATACTTGGGGCGTTTTCAACTGTGTaGTGTTGCTGTCTGGCACGAGCTCTCGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: WALVILGAFSTV*CCCLARALGGW
Trigger: CCATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 72 bp AGAAGTCCCACACCTTTGAGGGATCTCGGTTTCGCTTaGTTGCGGCGAGACATCCTGCAAGGTCTTGGACTG +
Preference number: 6 (lower is better)
Translates to: RSPTPLRDLGFA*LRRDILQGLGL
Trigger: CAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGGTGTGGGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583005.5
CDS CCA 72 bp GAGTTCTTCTTCTCCCCGCTATGCACCTGCTCCATGTaGTTCATGAGGGAGGTCTCCTCTACGAAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: EFFFSPLCTCSM*FMREVSSTKSS
Trigger: CGAGCTCTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TGCTTGTTTACTCGAGGGACCAGTCATGTCAGGGGTTaGTTGAGCGGCCCTCTTCCTCCCTCGACTCTTTGG +
Preference number: 6 (lower is better)
Translates to: CLFTRGTSHVRG*LSGPLPPSTLW
Trigger: CCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGACTGGTCCCTCGAGTAAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp GGTAACTTTTGCTTGTTTACTCGAGGGACCAGTCATGTCAGGGGTTaGTTGAGCGGCCCTCTTCCTCCCTCGACTCTTTGGGATTGGCGG +
Preference number: 6 (lower is better)
Translates to: GNFCLFTRGTSHVRG*LSGPLPPSTLWDWR
Trigger: CCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGACTGGTCCCTCGAGTAAACAAGCAAAAGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp TGTTTACTCGAGGGACCAGTCATGTCAGGGGTTTGTTaGGCGGCCCTCTTCCTCCCTCGACTCTTTGGGATT +
Preference number: 6 (lower is better)
Translates to: CLLEGPVMSGVC*AALFLPRLFGI
Trigger: AATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGACTGGTCCCTCGAGTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp CTTGCTTGCGGCGAGACATCCTGCAAGGTCTTGGACTaGGCTGTCGCTCCGGTAGTCCACATAATAATGGAA +
Preference number: 6 (lower is better)
Translates to: LACGETSCKVLD*AVAPVVHIIME
Trigger: TTCCATTATTATGTGGACTACCGGAGCGACAGCGCAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000579111.5
ENST00000583005.5
CDS GCA 72 bp ATGCTGCATGAGTTCTTCTTCTCCCCGCTATGCACCTaGTCCATGTGGTTCATGAGGGAGGTCTCCTCTACG +
Preference number: 6 (lower is better)
Translates to: MLHEFFFSPLCT*SMWFMREVSST
Trigger: CGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTCATGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp TCTCCAGTGGGACGTGCAGGTGCACCTCCTACTGCCTaGATCATCTTAAGAGATGTCTGCTCTATGGCCACA +
Preference number: 6 (lower is better)
Translates to: SPVGRAGAPPTA*IILRDVCSMAT
Trigger: TGTGGCCATAGAGCAGACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp CTGTTGTGGGACTCCTGGCTGTTGGTCAGCAAAGTCTaGAGCTCCACTTCCTCTTTCTGCACTTGCTCGGAA +
Preference number: 6 (lower is better)
Translates to: LLWDSWLLVSKV*SSTSSFCTCSE
Trigger: TTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAACAGCCAGGAGTCCCACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp CGCTGTCGCTCCGGTAGTCCACATAATAATGGAAAATaGAAGCAAGGCCCCCAAAGCCATCAGGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: RCRSGSPHNNGK*KQGPQSHQDGS
Trigger: GGAGCCATCCTGATGGCTTTGGGGGCCTTGCTTCCATTTTCCATTATTATGTGGACTACCGGAGCGACAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361524.8
ENST00000538137.6
ENST00000579111.5
ENST00000582584.1
ENST00000583005.5
ENST00000584787.5
CDS CCA 72 bp CAGCTTCCACCATGGTTGAGCTGTCCACTGAGAGGTTaGAATCTGGAGTCGTACTGGACACGGAGGTATAGC +
Preference number: 6 (lower is better)
Translates to: QLPPWLSCPLRG*NLESYWTRRYS
Trigger: GCTATACCTCCGTGTCCAGTACGACTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp GACTGGGAGGGACTGATTCTGGGCATTGGTGATACTTaGGGCGTTTTCAACTGTGTGCTGTTGCTGTCTGGC +
Preference number: 6 (lower is better)
Translates to: DWEGLILGIGDT*GVFNCVLLLSG
Trigger: GCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp TTGTTTACTCGAGGGACCAGTCATGTCAGGGGTTTGTaGAGCGGCCCTCTTCCTCCCTCGACTCTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: LFTRGTSHVRGL*SGPLPPSTLWD
Trigger: ATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGACTGGTCCCTCGAGTAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TGGAAATACTCTTTGAGGGATCTCGGTTTCGCTTGCTaGCGGCGAGACATCCTGCAAGGTCTTGGACTGCGC +
Preference number: 6 (lower is better)
Translates to: WKYSLRDLGFAC*RRDILQGLGLR
Trigger: GCGCAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGAGTATTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579111.5
CDS CAA 72 bp CAGTTGGGGTCTTTGAGGGATCTCGGTTTCGCTTGCTaGCGGCGAGACATCAAAGCGAGTCGTGCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: QLGSLRDLGFAC*RRDIKASRALL
Trigger: CAAAAGAGCACGACTCGCTTTGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGACCCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580488.1
CDS TCA 72 bp CTCATCCGACTGGGAGGGACTGATTCTGGGCATTGGTaGTACTTGGGGCGTTTTCAACTGTGTGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: LIRLGGTDSGHW*YLGRFQLCAVA
Trigger: AGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 72 bp GGTCTTCCGGGAAGTCAAAGCCTTCCTCACACTGACTaGACTTCTGAGTGTCCTTCATCTTCCAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GLPGSQSLPHTD*TSECPSSSSPP
Trigger: TGGAGGACTGGAAGATGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAGGCTTTGACTTCCCGGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp TTGGTGATACTTGGGGCGTTTTCAACTGTGTGCTGTTaGTGTCTGGCACGAGCTCTCGGTGGATGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: LVILGAFSTVCC*CLARALGGWFG
Trigger: TCCAAACCATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CCA 72 bp GCGGCTAAACGACTTGTCACAGAATTGACACGGGTATaGAAGCCCAGGGCCACCTTCTTCCTCTCCAAAATC +
Preference number: 6 (lower is better)
Translates to: AAKRLVTELTRV*KPRATFFLSKI
Trigger: GATTTTGGAGAGGAAGAAGGTGGCCCTGGGCTTCCATACCCGTGTCAATTCTGTGACAAGTCGTTTAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577720.1
ENST00000577801.5
ENST00000580488.1
ENST00000581869.1
ENST00000584787.5
CDS CCA 72 bp GACTTCTACTACTGGTTCTTTGGGAGTCCCAAGCACTaGAGACCCAAATCGGGAGCCACTGAGGTCACAATG +
Preference number: 6 (lower is better)
Translates to: DFYYWFFGSPKH*RPKSGATEVTM
Trigger: CATTGTGACCTCAGTGGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp GAATTCTTTGAGGCAAGATGCGCACTTATACAGTTTTaGGACGTGCTGGCCCCGCCCTGTGGTCTGAACTGC +
Preference number: 6 (lower is better)
Translates to: EFFEARCALIQF*DVLAPPCGLNC
Trigger: GCAGTTCAGACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp ATTGGTGATACTTGGGGCGTTTTCAACTGTGTGCTGTaGCTGTCTGGCACGAGCTCTCGGTGGATGGTTTGG +
Preference number: 6 (lower is better)
Translates to: IGDTWGVFNCVL*LSGTSSRWMVW
Trigger: CCAAACCATCCACCGAGAGCTCGTGCCAGACAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 90 bp CTTGGAACGGAATTCTTTGAGGCAAGATGCGCACTTATACAGTTTTaGGACGTGCTGGCCCCGCCCTGTGGTCTGAACTGCAGACCCATT +
Preference number: 6 (lower is better)
Translates to: LGTEFFEARCALIQF*DVLAPPCGLNCRPI
Trigger: AATGGGTCTGCAGTTCAGACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 90 bp GCTGTTGGTCAGCAAAGTCTGCAGCTCCACTTCCTCTTTCTGCACTaGCTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTCTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: AVGQQSLQLHFLFLH*LGSSICSTVGCLGF
Trigger: GAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp AGCAAAGTCTGCAGCTCCACTTCCTCTTTCTGCACTTaGTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: SKVCSSTSSFCT*SEAPFVPQLGV
Trigger: GACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp CAGCAAAGTCTGCAGCTCCACTTCCTCTTTCTGCACTaGCTCGGAAGCTCCATTTGTTCCACAGTTGGGTGT +
Preference number: 6 (lower is better)
Translates to: QQSLQLHFLFLH*LGSSICSTVGC
Trigger: ACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp ACTGGAGACCCAAATCGGGAGCCACTGAGGTCACAATaGACCTGTCTAATATGCTCTTCCAGGGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: TGDPNREPLRSQ*TCLICSSREES
Trigger: TGACTCTTCCCTGGAAGAGCATATTAGACAGGTTCATTGTGACCTCAGTGGCTCCCGATTTGGGTCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp CAGATCTTGCTTGGAACGGAATTCTTTGAGGCAAGATaGGCACTTATACAGTTTTTGGACGTGCTGGCCCCG +
Preference number: 6 (lower is better)
Translates to: QILLGTEFFEAR*ALIQFLDVLAP
Trigger: CGGGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 72 bp ATATGGAAATACTCTTTGAGGGATCTCGGTTTCGCTTaGTTGCGGCGAGACATCCTGCAAGGTCTTGGACTG +
Preference number: 6 (lower is better)
Translates to: IWKYSLRDLGFA*LRRDILQGLGL
Trigger: CAGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGAGTATTTCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579111.5
CDS CCA 72 bp CTGTCTGGCACGAGCTCTCGGTGGATGGTTTGGATGTaGTTCTGGAGTTCACTTTCAGACTCAAACTTAACG +
Preference number: 6 (lower is better)
Translates to: LSGTSSRWMVWM*FWSSLSDSNLT
Trigger: CGTTAAGTTTGAGTCTGAAAGTGAACTCCAGAACCACATCCAAACCATCCACCGAGAGCTCGTGCCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp GATATGGAAATACTCTTTGAGGGATCTCGGTTTCGCTaGCTTGCGGCGAGACATCCTGCAAGGTCTTGGACT +
Preference number: 6 (lower is better)
Translates to: DMEILFEGSRFR*LAARHPARSWT
Trigger: AGTCCAAGACCTTGCAGGATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGAGTATTTCCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579111.5
CDS CAA 90 bp GGTGCCAAAGGACTCACCGCAGAAAATGCACTTATGCACTTTCCCTaGGTTTTCCAGGTGGTTGTGTTTCACATGGAGCTGCAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: GAKGLTAENALMHFP*VFQVVVFHMELQVS
Trigger: ACTGACTTGCAGCTCCATGTGAAACACAACCACCTGGAAAACCAAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGTCCTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp TCTTCCGGCCTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCTGCAAGGTCTTGGACTGCG +
Preference number: 6 (lower is better)
Translates to: SSGLFLQSSASPSSV*SSSLQLGSARSWTA
Trigger: CGCAGTCCAAGACCTTGCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAGGCCGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582584.1
ENST00000584787.5
CDS TCA 72 bp CTCAACTGTGTGGAAACTCTCAGAACAAATGCTGCATaGGTTCTTCTTCTCCCCGCTATGCACCTGCTCCAT +
Preference number: 6 (lower is better)
Translates to: LNCVETLRTNAA*VLLLPAMHLLH
Trigger: ATGGAGCAGGTGCATAGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTTTCCACACAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp ATTGATAGGTCTTCTTCTCATCCGACTGGGAGGGACTaGTTCTGGGCATTGGTGATACTTGGGGCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: IDRSSSHPTGRD*FWALVILGAFS
Trigger: TGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGATGAGAAGAAGACCTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 72 bp CAATTCAGCCCTGAAAGAAACTGCAAGGTCTTGGACTaGGCTGTCGCTCCGGTAGTCCACATAATAATGGAA +
Preference number: 6 (lower is better)
Translates to: QFSPERNCKVLD*AVAPVVHIIME
Trigger: TTCCATTATTATGTGGACTACCGGAGCGACAGCGCAGTCCAAGACCTTGCAGTTTCTTTCAGGGCTGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538137.6
CDS CCA 72 bp CTTACTGAGATTCACGCAGCCGGCACACAGACCATATaGCAGGCCATTGATATCAAGTTTCACCAGATCTTG +
Preference number: 6 (lower is better)
Translates to: LTEIHAAGTQTI*QAIDIKFHQIL
Trigger: CAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCTGTGTGCCGGCTGCGTGAATCTCAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp CCACTTCCTCTTTCTGCACTTGCTCGGAAGCTCCATTaGTTCCACAGTTGGGTGTCTTGGTTTCGAATACAC +
Preference number: 6 (lower is better)
Translates to: PLPLSALARKLH*FHSWVSWFRIH
Trigger: GTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp TCTGCAGCTCCACTTCCTCTTTCTGCACTTGCTCGGAAGCTCCATTaGTTCCACAGTTGGGTGTCTTGGTTTCGAATACACAGTGTTTTT +
Preference number: 6 (lower is better)
Translates to: SAAPLPLSALARKLH*FHSWVSWFRIHSVF
Trigger: AAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp TTTCGCTTGCTTGCGGCGAGACATCCTAAAAGCAAACAGCTGAAGTaGTTTCAATTCAGCCCTGAAAGAAACTGCAAGGTCTTGGACTGC +
Preference number: 6 (lower is better)
Translates to: FRLLAARHPKSKQLK*FQFSPERNCKVLDC
Trigger: GCAGTCCAAGACCTTGCAGTTTCTTTCAGGGCTGAATTGAAACAACTTCAGCTGTTTGCTTTTAGGATGTCTCGCCGCAAGCAAGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538137.6
CDS TCA 72 bp ATGGCAGGCATGGCAGAAACAATCAGACCTGGGTCCTaGGCTTCATGCACTTGCTTAAGATGTTCATTTAGG +
Preference number: 6 (lower is better)
Translates to: MAGMAETIRPGS*ASCTCLRCSFR
Trigger: CCTAAATGAACATCTTAAGCAAGTGCATGAAGCTCAGGACCCAGGTCTGATTGTTTCTGCCATGCCTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp AGCAAGGATTCTTGGTTGGGGAATTCCTTGTTGCACTaGGGACAGGTCAATTTTGGAAGCACAGTGTCGAGA +
Preference number: 6 (lower is better)
Translates to: SKDSWLGNSLLH*GQVNFGSTVSR
Trigger: TCTCGACACTGTGCTTCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCAACCAAGAATCCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp ACCACATTGATTACAGATATATTCTCCAGTGGGACGTaGAGGTGCACCTCCTACTGCCTGCATCATCTTAAG +
Preference number: 6 (lower is better)
Translates to: TTLITDIFSSGT*RCTSYCLHHLK
Trigger: CTTAAGATGATGCAGGCAGTAGGAGGTGCACCTGCACGTCCCACTGGAGAATATATCTGTAATCAATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp AATAGGAACAAGAATAGACTTCTACTACTGGTTCTTTaGGAGTCCCAAGCACTGGAGACCCAAATCGGGAGC +
Preference number: 6 (lower is better)
Translates to: NRNKNRLLLLVL*ESQALETQIGS
Trigger: GCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTATTCTTGTTCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp ACTTCCTCTTTCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTaGGGTGTCTTGGTTTCGAATACACAGTGTTTTTCTCGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: TSSFCTCSEAPFVPQ*GVLVSNTQCFSRKC
Trigger: ACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp CAAATCCGGCAGTTTCCAGTATCAAGACTCTTACTATGCGTGACTTaGTGTTCAGTAAGAGTTAAAAGGGAGGGAAACCGCTCTCCGCAA +
Preference number: 6 (lower is better)
Translates to: QIRQFPVSRLLLCVT*CSVRVKREGNRSPQ
Trigger: TTGCGGAGAGCGGTTTCCCTCCCTTTTAACTCTTACTGAACACAAAGTCACGCATAGTAAGAGTCTTGATACTGGAAACTGCCGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp CCATTGATATCAAGTTTCACCAGATCTTGCTTGGAACGGAATTCTTaGAGGCAAGATGCGCACTTATACAGTTTTTGGACGTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PLISSFTRSCLERNS*RQDAHLYSFWTCWP
Trigger: GGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS TCA 72 bp GCTATGCTGAGATTCCAGATCTCAGTAGTGTTGGCATaGGCGCTGGTCTCTTCAGTCATAGAGAAGACAATA +
Preference number: 6 (lower is better)
Translates to: AMLRFQISVVLA*ALVSSVIEKTI
Trigger: TATTGTCTTCTCTATGACTGAAGAGACCAGCGCTCATGCCAACACTACTGAGATCTGGAATCTCAGCATAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS TCA 72 bp GCTTGCTTGCGGCGAGACATCCTAAAAGCAAACAGCTaGAGTTGTTTCAATTCAGCCCTGAAAGAAACTGCA +
Preference number: 6 (lower is better)
Translates to: ACLRRDILKANS*SCFNSALKETA
Trigger: TGCAGTTTCTTTCAGGGCTGAATTGAAACAACTTCAGCTGTTTGCTTTTAGGATGTCTCGCCGCAAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538137.6
CDS TCA 72 bp TGGCCTTGGCTCAGTTTCAAGACTTTTGATACGGAGTaGATAGGTTTTCATCAAGGCAGGCTCTCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: WPWLSFKTFDTE*IGFHQGRLSKE
Trigger: TTCCTTGGAGAGCCTGCCTTGATGAAAACCTATTCACTCCGTATCAAAAGTCTTGAAACTGAGCCAAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582584.1
CDS TCA 72 bp AGGCTTCGTTTGGCCTTGGCTCAGTTTCAAGACTTTTaGTACGGAGTGAATAGGTTTTCATCAAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: RLRLALAQFQDF*YGVNRFSSRQA
Trigger: AGCCTGCCTTGATGAAAACCTATTCACTCCGTATCAAAAGTCTTGAAACTGAGCCAAGGCCAAACGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582584.1
CDS GCA 72 bp GCTCTAAAAACTCCTCTTCACTCTGGAGAGGCATCTTaGAAATCCGGCAGTTTCCAGTATCAAGACTCTTAC +
Preference number: 6 (lower is better)
Translates to: ALKTPLHSGEAS*KSGSFQYQDSY
Trigger: GTAAGAGTCTTGATACTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAGTGAAGAGGAGTTTTTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp TATGGCAGGCCATTGATATCAAGTTTCACCAGATCTTaGTTGGAACGGAATTCTTTGAGGCAAGATGCGCAC +
Preference number: 6 (lower is better)
Translates to: YGRPLISSFTRS*LERNSLRQDAH
Trigger: GTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS GCA 72 bp GTTTGGCAGGAGAGTCAAAGGTCTGGCTGCAGAGTTTaGATTCATGGTTCAGTCCTTCATCAATCATGTGAT +
Preference number: 6 (lower is better)
Translates to: VWQESQRSGCRV*IHGSVLHQSCD
Trigger: ATCACATGATTGATGAAGGACTGAACCATGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCCTGCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp TCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTTaGGTGTCTTGGTTTCGAATACACAGTGTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: SALARKLHLFHS*VSWFRIHSVFL
Trigger: GAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TGGGGAATTCCTTGTTGCACTGAGGACAGGTCAATTTaGGAAGCACAGTGTCGAGATGAGTTTTTAGGTGAG +
Preference number: 6 (lower is better)
Translates to: WGIPCCTEDRSI*EAQCRDEFLGE
Trigger: CTCACCTAAAAACTCATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp ATGCACTTATGCACTTTCCCTTGGTTTTCCAGGTGGTaGTGTTTCACATGGAGCTGCAAGTCAGTTTCGTTG +
Preference number: 6 (lower is better)
Translates to: MHLCTFPWFSRW*CFTWSCKSVSL
Trigger: CAACGAAACTGACTTGCAGCTCCATGTGAAACACAACCACCTGGAAAACCAAGGGAAAGTGCATAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TGCTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTCTaGGTTTCGAATACACAGTGTTTTTCTCGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: CSEAPFVPQLGV*VSNTQCFSRKC
Trigger: ACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp GGCAGGCCATTGATATCAAGTTTCACCAGATCTTGCTaGGAACGGAATTCTTTGAGGCAAGATGCGCACTTA +
Preference number: 6 (lower is better)
Translates to: GRPLISSFTRSC*ERNSLRQDAHL
Trigger: TAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp CTTGCGGCGAGACATCCTAAAAGCAAACAGCTGAAGTaGTTTCAATTCAGCCCTGAAAGAAACTGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: LAARHPKSKQLK*FQFSPERNCKV
Trigger: GACCTTGCAGTTTCTTTCAGGGCTGAATTGAAACAACTTCAGCTGTTTGCTTTTAGGATGTCTCGCCGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538137.6
CDS CAA 90 bp ATTCTTGGTTGGGGAATTCCTTGTTGCACTGAGGACAGGTCAATTTaGGAAGCACAGTGTCGAGATGAGTTTTTAGGTGAGTCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: ILGWGIPCCTEDRSI*EAQCRDEFLGESES
Trigger: GCTTTCAGACTCACCTAAAAACTCATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCAACCAAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp ATTTGGCAATGCTCTAAAAACTCCTCTTCACTCTGGAGAGGCATCTaGCAAATCCGGCAGTTTCCAGTATCAAGACTCTTACTATGCGTG +
Preference number: 6 (lower is better)
Translates to: IWQCSKNSSSLWRGI*QIRQFPVSRLLLCV
Trigger: CACGCATAGTAAGAGTCTTGATACTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAGTGAAGAGGAGTTTTTAGAGCATTGCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 90 bp ACACAGACCATATGGCAGGCCATTGATATCAAGTTTCACCAGATCTaGCTTGGAACGGAATTCTTTGAGGCAAGATGCGCACTTATACAG +
Preference number: 6 (lower is better)
Translates to: TQTIWQAIDIKFHQI*LGTEFFEARCALIQ
Trigger: CTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CCA 72 bp CTTCTGTATTTGACCTTCATCTCCAAAGGCTTCGTTTaGCCTTGGCTCAGTTTCAAGACTTTTGATACGGAG +
Preference number: 6 (lower is better)
Translates to: LLYLTFISKGFV*PWLSFKTFDTE
Trigger: CTCCGTATCAAAAGTCTTGAAACTGAGCCAAGGCCAAACGAAGCCTTTGGAGATGAAGGTCAAATACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582584.1
CDS CAA 72 bp CATAAAGTGAATGGTAACATGCTTCAGCAAGGATTCTaGGTTGGGGAATTCCTTGTTGCACTGAGGACAGGT +
Preference number: 6 (lower is better)
Translates to: HKVNGNMLQQGF*VGEFLVALRTG
Trigger: ACCTGTCCTCAGTGCAACAAGGAATTCCCCAACCAAGAATCCTTGCTGAAGCATGTTACCATTCACTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TTCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTaGGGTGTCTTGGTTTCGAATACACAGTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: FCTCSEAPFVPQ*GVLVSNTQCFS
Trigger: AGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TGCTCTAAAAACTCCTCTTCACTCTGGAGAGGCATCTaGCAAATCCGGCAGTTTCCAGTATCAAGACTCTTA +
Preference number: 6 (lower is better)
Translates to: CSKNSSSLWRGI*QIRQFPVSRLL
Trigger: TAAGAGTCTTGATACTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAGTGAAGAGGAGTTTTTAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp GTTAAGGGCATGGAATCTGGAGGCAGGATGCCTAAGTaGAAACCCGAGCTTCATTATTCATATTTACGTGAC +
Preference number: 6 (lower is better)
Translates to: VKGMESGGRMPK*KPELHYSYLRD
Trigger: GTCACGTAAATATGAATAATGAAGCTCGGGTTTCAACTTAGGCATCCTGCCTCCAGATTCCATGCCCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581869.1
CDS CAA 72 bp CTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCTGCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: LFLQSSASPSSV*SSSLQLGSARS
Trigger: AGACCTTGCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582584.1
ENST00000584787.5
CDS CAA 90 bp TTCTGCACTTGCTCGGAAGCTCCATTTGTTCCACAGTTGGGTGTCTaGGTTTCGAATACACAGTGTTTTTCTCGCAAGTGTTTTTCTAAC +
Preference number: 6 (lower is better)
Translates to: FCTCSEAPFVPQLGV*VSNTQCFSRKCFSN
Trigger: GTTAGAAAAACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCCAACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS TCA 72 bp CAAGTTTCACCAGATCTTGCTTGGAACGGAATTCTTTaGGGCAAGATGCGCACTTATACAGTTTTTGGACGT +
Preference number: 6 (lower is better)
Translates to: QVSPDLAWNGIL*GKMRTYTVFGR
Trigger: ACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS TCA 72 bp GCTTGCTTGCGGCGAGACATCCTAAAAGCAAACAGCTaGAGTTGTTTCAATTCAGCCCTGAAAGAAACTATA +
Preference number: 6 (lower is better)
Translates to: ACLRRDILKANS*SCFNSALKETI
Trigger: TATAGTTTCTTTCAGGGCTGAATTGAAACAACTTCAGCTGTTTGCTTTTAGGATGTCTCGCCGCAAGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577461.1
CDS TCA 72 bp TTAAGGGCATGGAATCTGGAGGCAGGATGCCTAAGTTaGAACCCGAGCTTCATTATTCATATTTACGTGACT +
Preference number: 6 (lower is better)
Translates to: LRAWNLEAGCLS*NPSFIIHIYVT
Trigger: AGTCACGTAAATATGAATAATGAAGCTCGGGTTTCAACTTAGGCATCCTGCCTCCAGATTCCATGCCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581869.1
CDS GCA 72 bp GCAATGGGGACAAAAGAATGCATTACTATCTTTAGCTaGAGGGTTTGCAAATCCATGAGAACATCGGATGTG +
Preference number: 6 (lower is better)
Translates to: AMGTKECITIFS*RVCKSMRTSDV
Trigger: CACATCCGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAAGATAGTAATGCATTCTTTTGTCCCCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp TGTGAGTCTTTAAGTGGATCTTCAAGTGATCACTTCTaGAAAACGCAGCATCACATTCACTGCAGTGGTACT +
Preference number: 6 (lower is better)
Translates to: CESLSGSSSDHF*KTQHHIHCSGT
Trigger: AGTACCACTGCAGTGAATGTGATGCTGCGTTTTCCAGAAGTGATCACTTGAAGATCCACTTAAAGACTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577720.1
ENST00000577801.5
ENST00000584787.5
CDS CAA 72 bp CTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCTTTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: LFLQSSASPSSV*SSSLQLGSLRD
Trigger: ATCCCTCAAAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577801.5
ENST00000580488.1
CDS CAA 72 bp TTTGTTGCAGTAAATACAGCTGTAGGTAACTTTTGCTaGTTTACTCGAGGGACCAGTCATGTCAGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: FVAVNTAVGNFC*FTRGTSHVRGL
Trigger: CAAACCCCTGACATGACTGGTCCCTCGAGTAAACAAGCAAAAGTTACCTACAGCTGTATTTACTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp CAGTTTCCAGTATCAAGACTCTTACTATGCGTGACTTaGTGTTCAGTAAGAGTTAAAAGGGAGGGAAACCGC +
Preference number: 6 (lower is better)
Translates to: QFPVSRLLLCVT*CSVRVKREGNR
Trigger: GCGGTTTCCCTCCCTTTTAACTCTTACTGAACACAAAGTCACGCATAGTAAGAGTCTTGATACTGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp TCAAGTTTCACCAGATCTTGCTTGGAACGGAATTCTTaGAGGCAAGATGCGCACTTATACAGTTTTTGGACG +
Preference number: 6 (lower is better)
Translates to: SSFTRSCLERNS*RQDAHLYSFWT
Trigger: CGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 72 bp CTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCGGAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LFLQSSASPSSV*SSSLQLGSEAK
Trigger: TTTTGCTTCCGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579111.5
CDS CAA 90 bp AGACCATATGGCAGGCCATTGATATCAAGTTTCACCAGATCTTGCTaGGAACGGAATTCTTTGAGGCAAGATGCGCACTTATACAGTTTT +
Preference number: 6 (lower is better)
Translates to: RPYGRPLISSFTRSC*ERNSLRQDAHLYSF
Trigger: AAAACTGTATAAGTGCGCATCTTGCCTCAAAGAATTCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CAA 90 bp TCTTCCGGCCTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCTGAAAAATATCAACACTGT +
Preference number: 6 (lower is better)
Translates to: SSGLFLQSSASPSSV*SSSLQLGSEKYQHC
Trigger: ACAGTGTTGATATTTTTCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAGGCCGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583398.1
CDS TCA 72 bp GAATATCCCATTCATTGTAGAAAACCATCTGACACTTaGTGCATTGATAGGTCTTCTTCTCATCCGACTGGG +
Preference number: 6 (lower is better)
Translates to: EYPIHCRKPSDT*CIDRSSSHPTG
Trigger: CCCAGTCGGATGAGAAGAAGACCTATCAATGCATCAAGTGTCAGATGGTTTTCTACAATGAATGGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000538137.6
ENST00000577775.1
ENST00000584787.5
CDS CCA 72 bp ATTTGTACAATAGGAACAAGAATAGACTTCTACTACTaGTTCTTTGGGAGTCCCAAGCACTGGAGACCCAAA +
Preference number: 6 (lower is better)
Translates to: ICTIGTRIDFYY*FFGSPKHWRPK
Trigger: TTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTATTCTTGTTCCTATTGTACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp CCTCTCCATCTTCAGTCTTGTCTTCAAGTTTACAGTTaGGGTCTGAAAAATATCAACACTGTAAGTATGGGG +
Preference number: 6 (lower is better)
Translates to: PLHLQSCLQVYS*GLKNINTVSMG
Trigger: CCCCATACTTACAGTGTTGATATTTTTCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583398.1
CDS CAA 72 bp CCATTCATTGTAGAAAACCATCTGACACTTGATGCATaGATAGGTCTTCTTGGTGAAGCTATGCTGAGATTC +
Preference number: 6 (lower is better)
Translates to: PFIVENHLTLDA*IGLLGEAMLRF
Trigger: GAATCTCAGCATAGCTTCACCAAGAAGACCTATCAATGCATCAAGTGTCAGATGGTTTTCTACAATGAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399425.6
CDS TCA 72 bp GCCTGTTCTGGCTTATCTAAGTGCATAGTTTTCAGGTaGATCTGCAGAACTGCAAGACTTGAAAATAATTGT +
Preference number: 6 (lower is better)
Translates to: ACSGLSKCIVFR*ICRTARLENNC
Trigger: ACAATTATTTTCAAGTCTTGCAGTTCTGCAGATTCACCTGAAAACTATGCACTTAGATAAGCCAGAACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CAA 72 bp CTCTTCTTACAATCTAGTGCCTCTCCATCTTCAGTCTaGTCTTCAAGTTTACAGTTGGGGTCTGAAAAATAT +
Preference number: 6 (lower is better)
Translates to: LFLQSSASPSSV*SSSLQLGSEKY
Trigger: ATATTTTTCAGACCCCAACTGTAAACTTGAAGACAAGACTGAAGATGGAGAGGCACTAGATTGTAAGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583398.1
CDS TCA 72 bp GAATTGCTTGTCACAACTCTCACAGATGTAATACGTTaGAGTGATCATAAAGTGAATGGTAACATGCTTCAG +
Preference number: 6 (lower is better)
Translates to: ELLVTTLTDVIR*SDHKVNGNMLQ
Trigger: CTGAAGCATGTTACCATTCACTTTATGATCACTTCAACGTATTACATCTGTGAGAGTTGTGACAAGCAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS GCA 72 bp GCATTCATGGTTCAGTCCTTCATCAATCATGTGATTTaGAACATGAACCTGAATATCCCATTCATTGTAGAA +
Preference number: 6 (lower is better)
Translates to: AFMVQSFINHVI*NMNLNIPFIVE
Trigger: TTCTACAATGAATGGGATATTCAGGTTCATGTTGCAAATCACATGATTGATGAAGGACTGAACCATGAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5
CDS CCA 72 bp GATATGCTTGTTCAGTTTAAGAACGCTGTTGAATATTaGCGAATTTGTACAATAGGAACAAGAATAGACTTC +
Preference number: 6 (lower is better)
Translates to: DMLVQFKNAVEY*RICTIGTRIDF
Trigger: GAAGTCTATTCTTGTTCCTATTGTACAAATTCGCCAATATTCAACAGCGTTCTTAAACTGAACAAGCATATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361524.8
ENST00000399425.6
ENST00000538137.6
ENST00000584787.5