RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF518B (Homo sapiens)

Ensembl gene IDs: ENSG00000178163

Ensembl transcript IDs: ENST00000326756.4, ENST00000500268.6, ENST00000503068.1, ENST00000507515.1, ENST00000515072.1

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTaGTCTACCTGGAAGGTCAGCGCCCAGCTGCACAGGCAAGTGAAG +
Preference number: 1 (lower is better)
Translates to: GREMQVGAASGLCHL*STWKVSAQLHRQVK
Trigger: CTTCACTTGCCTGTGCAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CCA 90 bp ATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTACCTaGAAGGTCAGCGCCCAGCTGCACAGGCAAGTGAAGACTAGAATC +
Preference number: 1 (lower is better)
Translates to: MQVGAASGLCHLCST*KVSAQLHRQVKTRI
Trigger: GATTCTAGTCTTCACTTGCCTGTGCAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR GCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTaGATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAAT +
Preference number: 1 (lower is better)
Translates to: FSFTGSLQKNAYVPI*MYNFRAFKYILGSN
Trigger: ATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR GCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGAAGCAAAACTCTTTGTaGTATACGGAACACTCGGGA +
Preference number: 2 (lower is better)
Translates to: PWREGNASWGCLGVVPSVKQNSL*YTEHSG
Trigger: TCCCGAGTGTTCCGTATAGCACAAAGAGTTTTGCTT...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTCTCAATCTGCCCCTCTaGATGGATTATGAAAGATCA +
Preference number: 2 (lower is better)
Translates to: GGREMQVGAASGLCHLCSLNLPL*MDYERS
Trigger: TGATCTTTCATAATCCATTCAGAGGGGCAGATTGAG...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR GCA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGACCCAGCCACCTATCTaGCCAAGAGGCTGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLTQPPI*PRGCAC
Trigger: ACAAGCACAGCCTCTTGGGCAGATAGGTGGCTGGGT...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTTTATGAGCCTACCTTaGACTGTGTTTGCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAFMSLP*TVFASF
Trigger: AAAACTCGCAAACACAGTTCAAGGTAGGCTCATAAA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTCATCTGTGCTCTACCTaGAAGGTCAGCGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTHLCST*KVSAQL
Trigger: CAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATG...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCCTGTATTTCTTCTACTaGATCTTGGTGGAGGGACTC +
Preference number: 2 (lower is better)
Translates to: ESSVHESKGSRREKTASTLYFFY*ILVEGL
Trigger: GAGTCCCTCCACCAAGATTCAGTAGAAGAAATACAG...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR GCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGCTCTCTCCAGAAAAATaGATATGTACCAATTTGCAT +
Preference number: 2 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMLSPEK*ICTNLH
Trigger: ATGCAAATTGGTACATATGCATTTTTCTGGAGAGAG...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTCCGGTTCAGAAGAAATaGCAAAGGGAGTCTAGTGTC +
Preference number: 2 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTPVQKK*QRESSV
Trigger: GACACTAGACTCCCTTTGCCATTTCTTCTGAACCGG...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCCCTCTGAATGGATTATaGAAGATCAGTATGTACTCA +
Preference number: 2 (lower is better)
Translates to: ESSVHESKGSRREKTASTPLNGL*KISMYS
Trigger: TGAGTACATACTGATCTTTCATAATCCATTCAGAGG...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCTCTTCTACTGAATCTTaGTGGAGGGACTCCAAACCA +
Preference number: 2 (lower is better)
Translates to: GSLQKNAYVPICMYNFRASSTES*WRDSKP
Trigger: TGGTTTGGAGTCCCTCCACCAAGATTCAGTAGAAGA...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CAA 90 bp ACTAAAGGGCATATGAAACCCTTTTCACAACTTTATGAGCCTACCTaGAACTGTGTTTGCGAGTTTTACCTATGTTGTAAGCCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: TKGHMKPFSQLYEPT*NCVCEFYLCCKPVP
Trigger: GGGAACAGGCTTACAACATAGGTAAAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCATATGCCCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACATCTACTGAATCTTGGTaGAGGGACTCCAAACCAGAA +
Preference number: 2 (lower is better)
Translates to: QFACTISEPSNTFWGPITSTESW*RDSKPE
Trigger: TTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAGA...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR TCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGAGTCTCAGATCCCACTaGAAATCTGTTCAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWSLRSH*KSVQFH
Trigger: GTGAAACTGAACAGATTTTCAGTGGGATCTGAGACT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR GCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTCTTTCTTCTAACACTTaGTGTGAAAGGAGTAAATTC +
Preference number: 2 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTLSSNT*CERSKF
Trigger: GAATTTACTCCTTTCACAGCAAGTGTTAGAAGAAAG...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CCA 72 bp GGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTACCTaGAAGGTCAGCGCCCAGCTGCACAGGCAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: GAASGLCHLCST*KVSAQLHRQVK
Trigger: CTTCACTTGCCTGTGCAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATGGCACAACCCCGAGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR GCA 72 bp ATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTaGTCTACCTGGAAGGTCAGCGCCCAGCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: MQVGAASGLCHL*STWKVSAQLHR
Trigger: CCTGTGCAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CCA 72 bp GACAGGAATAGCCCCTGGAGGGAGGGAAATGCAAGTTaGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAC +
Preference number: 3 (lower is better)
Translates to: DRNSPWREGNAS*GCLGVVPSVLY
Trigger: GTAGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGGGCTATTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTGGGAGGTCTCCATTTaGTTGATTCCTGCCATTTTC +
Preference number: 3 (lower is better)
Translates to: GGREMQVGAASGLCHLCSWEVSI*LIPAIF
Trigger: GAAAATGGCAGGAATCAACAAAATGGAGACCTCCCA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CAA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTATCCACCCATGGTCTTaGGATGAATCCCAAATGAAA +
Preference number: 3 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAIHPWS*DESQMK
Trigger: TTTCATTTGGGATTCATCCAAAGACCATGGGTGGAT...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR-3UTR CAA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCTGCATATGTACCAATTaGCATGTACAATTTCAGAGC +
Preference number: 3 (lower is better)
Translates to: ESSVHESKGSRREKTASTCICTN*HVQFQS
Trigger: GCTCTGAAATTGTACATGCAAATTGGTACATATGCA...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR TCA 72 bp CAGTCCTCTCATTTCTACAGTCTGTATTTCTTCTACTaGATCTTGGTGGAGGGACTCCAAACCAGAATAAAC +
Preference number: 3 (lower is better)
Translates to: QSSHFYSLYFFY*ILVEGLQTRIN
Trigger: GTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAGAAGAAATACAGACTGTAGAAATGAGAGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CCA 72 bp TTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTaGGGTCCAATCACATACTTCAGGTTCAGACTCCTA +
Preference number: 3 (lower is better)
Translates to: FACTISEPSNTF*GPITYFRFRLL
Trigger: TAGGAGTCTGAACCTGAAGTATGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CCA 72 bp ATATATTTTGTTCAGTCTAGTTCAACAGACAGCAGGTaGCCCTTAATGAAGGCTTACAAGATGTTCTCGACT +
Preference number: 3 (lower is better)
Translates to: IYFVQSSSTDSR*PLMKAYKMFST
Trigger: AGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCTGCTGTCTGTTGAACTAGACTGAACAAAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR GCA 72 bp ACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTaGATGTACAATTTCAGAGCCTTCAAATACATTCTG +
Preference number: 3 (lower is better)
Translates to: TGSLQKNAYVPI*MYNFRAFKYIL
Trigger: CAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR TCA 72 bp TGTTTTTACTTATGCTTGAAAGTTGATGCTGCGAAGTaGAAATACTTCATGTTGACAGTTAACACTCTGACC +
Preference number: 3 (lower is better)
Translates to: CFYLCLKVDAAK*KYFMLTVNTLT
Trigger: GGTCAGAGTGTTAACTGTCAACATGAAGTATTTTCACTTCGCAGCATCAACTTTCAAGCATAAGTAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR TCA 72 bp CCATCAAAGTATGCAAGTTGTGTTTTTACTTATGCTTaGAAGTTGATGCTGCGAAGTGAAAATACTTCATGT +
Preference number: 3 (lower is better)
Translates to: PSKYASCVFTYA*KLMLRSENTSC
Trigger: ACATGAAGTATTTTCACTTCGCAGCATCAACTTTCAAGCATAAGTAAAAACACAACTTGCATACTTTGATGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTCAGGCCGGATTCGGGTaGCAGGTCCCGGCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSQAGFG*QVPAKG
Trigger: CCCCTTCGCCGGGACCTGGCACCCGAATCCGGCCTG...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CAA 72 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTaGTGCCATCTGTGCTCTACCTGGAAGGTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASG*CHLCSTWKVSA
Trigger: GGCGCTGACCTTCCAGGTAGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTGCTTGGCAACAGCTTTaGCTGGCCGTTTCGCACCTG +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSAWQQL*LAVSHL
Trigger: CAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGC...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTGGCAGCCTCTGCCTCTaGGCCTTGATACAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSGSLCL*ALIQKG
Trigger: ACCCTTTTGTATCAAGGCTCAGAGGCAGAGGCTGCC...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTGAGCTGCACCGAGGCTaGACTGGAAGCAGACATACA +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSELHRG*TGSRHT
Trigger: TGTATGTCTGCTTCCAGTGCAGCCTCGGTGCAGCTC...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAAGAGGCTGTGCTTGTaGAGGGGGTGGGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSKRLCL*RGWAFF
Trigger: GAAAAAGGCCCACCCCCTGCACAAGCACAGCCTCTT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGGCCGCAGTAGGTGCATaGTCCCAAAATATGACTGCT +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVAAVGA*SQNMTA
Trigger: AGCAGTCATATTTTGGGATCATGCACCTACTGCGGC...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGAGAGTACCTGTGGAATaGCCAAGACCAGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVRVPVE*PRPVSD
Trigger: GTCACTCACTGGTCTTGGCCATTCCACAGGTACTCT...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAATGGCATACCTGGCTaGACAGGTTCTTTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSNGIPG*TGSFAG
Trigger: CCCTGCAAAAGAACCTGTTCAGCCAGGTATGCCATT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCTGGAGGGAGGGAAATaGAAGTTGGGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVALEGGK*KLGLPR
Trigger: CCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTTCTCTTCTCAGGCGTaGACTGCCATGAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSFSSQA*TAMSFT
Trigger: TGTGAAACTCATGGCAGTCCACGCCTGAGAAGAGAA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTGTAAGTCAAAACCGTaGCAAGTCCCATGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSCKSKP*QVPWAL
Trigger: AAGAGCCCATGGGACTTGCCACGGTTTTGACTTACA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTGCTTCTTGTCTATTTaGCCGAGGTGCTCCATTAGC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSCFLSI*PRCSIS
Trigger: GCTAATGGAGCACCTCGGCCAAATAGACAAGAAGCA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGTGTCAATGGCATACCTaGCTGAACAGGTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVCQWHT*LNRFFC
Trigger: GCAAAAGAACCTGTTCAGCCAGGTATGCCATTGACA...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGAGGTGTCTCGATATTTaGGGACATATCTATTGGCCC +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVRCLDI*GHIYWP
Trigger: GGGCCAATAGATATGTCCCCAAATATCGAGACACCT...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCAATCTGCCCCTCTaGATGGATTATGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVLNLPL*MDYERS
Trigger: TGATCTTTCATAATCCATTCAGAGGGGCAGATTGAG...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCGCGTCAGCAAGGCGCTaGACAAAGAGGCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTASARR*TKRPGR
Trigger: CCTGCCGGGCCTCTTTGTGCAGCGCCTTGCTGACGC...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTCCTTCCTGGCCACTCTaGTTTTGGTTTTCCTATTAC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSPSWPL*FWFSYY
Trigger: GTAATAGGAAAACCAAAAGCAGAGTGGCCAGGAAGG...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTTAATCTCCTCGTGTTaGAGGGTGTGCTTTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSLISSC*RVCFLY
Trigger: GTACAAAAAGCACACCCTTCAACACGAGGAGATTAA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGAAATGCCGTTGGCCATaGCTCATCCACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMKCRWP*LIHSSW
Trigger: CCAGGAAGAGTGGATGAGTCATGGCCAACGGCATTT...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGAAAATTGGGAGGAGCTaGACCGAGGCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMKIGRS*TEAALE
Trigger: TTCCAGTGCAGCCTCGGTGCAGCTCCTCCCAATTTT...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTGTTCCCTTTGATGCCTaGCCTACAGAGCGACGATGT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAVPFDA*PTERRC
Trigger: ACATCGTCGCTCTGTAGGGCAGGCATCAAAGGGAAC...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTCTTTCTTTATATACTaGCGCAGTAGGTGCATGATC +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSSFFIY*RSRCMI
Trigger: GATCATGCACCTACTGCGGCAGTATATAAAGAAAGA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTGGCCGTTTCGCACCTaGCCTTTCATGTACTCTCTT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAWPFRT*PFMYSL
Trigger: AAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGGGTGTCTTTTTCAGGTaGAACAACTCTTTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PWREGNASWGCLGVVPSVGVFFR*NNSLVS
Trigger: TGAAACTAAAGAGTTGTTGCACCTGAAAAAGACACC...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTCTTAATCAACTGATCTaGCTTAGCTGCTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSLNQLI*LSCYQS
Trigger: AGACTGATAGCAGCTAAGCCAGATCAGTTGATTAAG...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGTCATTCGGAGGTTTCTaGAGAGTACCTGTGGAATGG +
Preference number: 4 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMSFGGF*RVPVEW
Trigger: CCATTCCACAGGTACTCTTCAGAAACCTCCGAATGA...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGACTGGCGTGGCAACATaGGCCTTCCTGGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLTGVAT*AFLATL
Trigger: CAGAGTGGCCAGGAAGGCTCATGTTGCCACGCCAGT...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTGTTTTTACTTATGCTTaGAAGTTGATGCTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSVFTYA*KLMLRS
Trigger: ACTTCGCAGCATCAACTTTCAAGCATAAGTAAAAAC...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAAAACATTCTCAATCTaGCCCTCTGAATGGATTATG +
Preference number: 4 (lower is better)
Translates to: GGREMQVGAASGLCHLCSKTFSI*PSEWIM
Trigger: CATAATCCATTCAGAGGGGCAGATTGAGAATGTTTT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTCAACAGACAGCAGGTaGCCCTTAATGAAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVASTDSR*PLMKAY
Trigger: GTAAGCCTTCATTAAGGGCCACCTGCTGTCTGTTGA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTGCAACCTGAAAAATTaGAGGATCCTTGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVACNLKN*RILETA
Trigger: CGCTGTCTCAAGGATCCTTCAATTTTTCAGGTTGCA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCTGTATTTCTTCTACTaGATCTTGGTGGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVALYFFY*ILVEGL
Trigger: GAGTCCCTCCACCAAGATTCAGTAGAAGAAATACAG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCTGCCCAAGAGGCTGTaGTTGTGCAGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYLPKRL*LCRGWA
Trigger: GGCCCACCCCCTGCACAAGCACAGCCTCTTGGGCAG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCTCTACGTAGTGAAGTaGTACCAAAGATCTACTTCC +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVALYVVK*YQRSTS
Trigger: GGAAGTAGATCTTTGGTACCACTTCACTACGTAGAG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTAGGCGTGGACTGCCATaGGTTTCACAACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTRRGLP*VSQPQA
Trigger: GGCCTGAGGTTGTGAAACTCATGGCAGTCCACGCCT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTGTTCTCAAATAGGTTaGCTTCATTTGGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVACSQIG*LHLAQT
Trigger: TGTCTGAGCCAAATGAAGTCAACCTATTTGAGAACA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTATTTGCCTTTTAATTTaGCTGGCTTCTTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAICLLI*LASSAF
Trigger: GAATGCGGAAGAAGCCAGTCAAATTAAAAGGCAAAT...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTTTTTCTATGGATGGTaGTACAGACAGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAFFYGW*YRQHSL
Trigger: AAGAGAGTGCTGTCTGTAGCACCATCCATAGAAAAA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCGGCAACAGCTTTGACTaGCCGTTTCGCACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAGNSFD*PFRTCP
Trigger: AGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCC...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCTTTATTTTAGACGTTaGGCTATTCCACTTAATGCC +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVALYFRR*AIPLNA
Trigger: GGCATTAAGTGGAATAGCTCAACGTCTAAAATAAAG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTTCCTGTCTTAAGCACTaGCCCAGCCACCTATCTGCC +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTSCLKH*PSHLSA
Trigger: GGCAGATAGGTGGCTGGGTCAGTGCTTAAGACAGGA...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGCTTATGCTTGAAAGTTaGTGCTGCGAAGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMLMLES*CCEVKI
Trigger: TATTTTCACTTCGCAGCATCAACTTTCAAGCATAAG...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGGCATATGTACCAATTTaGATGTACAATTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMAYVPI*MYNFRA
Trigger: GGCTCTGAAATTGTACATGCAAATTGGTACATATGC...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGTCTACATCAGAACCCTaGGCGTCAGCAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLSTSEP*ASARRC
Trigger: GCAGCGCCTTGCTGACGCCCAGGGTTCTGATGTAGA...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTGCACCGAGGCTGCACTaGAAGCAGACATACATACCG +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTAPRLH*KQTYIP
Trigger: CGGTATGTATGTCTGCTTCCAGTGCAGCCTCGGTGC...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCTCACAAAATGAAAATTaGGAGGAGCTGCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTSQNEN*EELHRG
Trigger: GCCTCGGTGCAGCTCCTCCCAATTTTCATTTTGTGA...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCAACATGAGTCGCACTaGAATTATTGCTCACAAAAT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAQHESH*NYCSQN
Trigger: ATTTTGTGAGCAATAATTCCAGTGCGACTCATGTTG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCGAGTCCACATCAGGGTaGTTTAACACAATGACTGGC +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTESTSG*FNTMTG
Trigger: GCCAGTCATTGTGTTAAACCACCCTGATGTGGACTC...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGCATCTGTGCTCTACCTaGAAGGTCAGCGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWHLCST*KVSAQL
Trigger: CAGCTGGGCGCTGACCTTCCAGGTAGAGCACAGATG...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACGAGGGAAATGCAAGTTaGGGCTGCCTCGGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYEGNAS*GCLGVV
Trigger: CACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTC...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTACAATCTCTCACTTCTaGTCCACCAAAGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVATISHF*STKVRK
Trigger: TTTTCTTACTTTGGTGGACCAGAAGTGAGAGATTGT...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCATATGGAAAAGGGTTTaGTGCAGCTCCAAGACTACG +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTIWKRV*CSSKTT
Trigger: CGTAGTCTTGGAGCTGCATCAAACCCTTTTCCATAT...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCGGACACTTAATCAACTaGTCTGGCTTAGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTGHLIN*SGLAAI
Trigger: GATAGCAGCTAAGCCAGATCAGTTGATTAAGTGTCC...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTGGTGGTTTAACACAATaGCTGGCTGGTTCCGACGGG +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFGGLTQ*LAGSDG
Trigger: CCCGTCGGAACCAGCCAGTCATTGTGTTAAACCACC...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCGTTAACACTCTGACCTaGTTCAAGGCCAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTVNTLT*FKANSQ
Trigger: CTGAGAATTGGCCTTGAATCAGGTCAGAGTGTTAAC...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCAGCTACTTCTTGGGTaGATACTTAATTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAQLLLG*ILNYLS
Trigger: AGAAAGATAATTAAGTATGCACCCAAGAAGTAGCTG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTGATTTTCCATTGTTGTaGACACTAGAATTTGGCATA +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVADFPLL*TLEFGI
Trigger: TATGCCAAATTCTAGTGTGCACAACAATGGAAAATC...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCAGGTATGCTGACAGGTaGTTCACATGTAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTRYADR*FTCSLY
Trigger: ATAGAGGCTACATGTGAAGCACCTGTCAGCATACCT...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGACCCAGCCACCTATCTaGCCAAGAGGCTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWTQPPI*PRGCAC
Trigger: ACAAGCACAGCCTCTTGGGCAGATAGGTGGCTGGGT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCCACAACCTCAGGCCCTaGTGTAGGCTTCTACATCAG +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAHNLRP*CRLLHQ
Trigger: CTGATGTAGAAGCCTACACCAGGGCCTGAGGTTGTG...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTCAAACTACATCTTTTTaGTATTCCTTTGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAQTTSF*YSFGSG
Trigger: ACCTGAACCAAAGGAATACCAAAAAGATGTAGTTTG...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTCTTCTATACAGTTTGTaGTGGGTAGGGGCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTLLYSL*WVGAQL
Trigger: TAGCTGCGCCCCTACCCATCACAAACTGTATAGAAG...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACACGTCTGATGCCTAGCTaGCACCTAGTCCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITRLMPS*HLVLSD
Trigger: ATCAGAGAGGACTAGGTGTCAGCTAGGCATCAGACG...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCTTCTCAGGCGTGGACTaGCATGAGTTTCACAACCTC +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAFSGVD*HEFHNL
Trigger: GAGGTTGTGAAACTCATGGCAGTCCACGCCTGAGAA...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGGGATTAACACTGGCGTaGCAACATGAGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWGLTLA*QHEPSW
Trigger: CCAGGAAGGCTCATGTTGCCACGCCAGTGTTAATCC...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCCAGTTTTTCTATGGATaGTGCTACAGACAGCACTCT +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTQFFYG*CYRQHS
Trigger: AGAGTGCTGTCTGTAGCACCATCCATAGAAAAACTG...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACACACATTGGTCACTTCTaGCGAGTCCACATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITHIGHF*RVHIRV
Trigger: CACCCTGATGTGGACTCGCCAGAAGTGACCAATGTG...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGTCTACTGAATCTTGGTaGAGGGACTCCAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLSTESW*RDSKPE
Trigger: TTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAGA...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACGACAGGAATAGCCCCTaGAGGGAGGGAAATGCAAGT +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYDRNSP*REGNAS
Trigger: ACTTGCATTTCCCTCCCTCCAGGGGCTATTCCTGTC...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTTCTGCCTCTGAGCCTTaGTACAAAAGGGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTSASEP*YKRVCA
Trigger: AGCACAAACCCTTTTGTATCAAGGCTCAGAGGCAGA...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCTCTGACCACTTATTTTaGAATGTAGTCCGTGGATTG +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTSDHLF*NVVRGL
Trigger: CAATCCACGGACTACATTTCAAAATAAGTGGTCAGA...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTAATCTGGCCTACAGTTaGAACTGCCTTGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTNLAYS*NCLVFL
Trigger: GAGGAACACAAGGCAGTTTCAACTGTAGGCCAGATT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCTGTGTAGTGTATAGCTaGTGTCCAATATCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ESSVHESKGSRREKTASTCVVYS*CPISFI
Trigger: GATGAAGGATATTGGACAGCAGCTATACACTACACA...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACATCTATTTGGCCGAGGTaGTCCATTAGCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITSIWPR*SISIRL
Trigger: CAGCCTGATGCTAATGGAGCACCTCGGCCAAATAGA...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCGTGTGCTTTTTGTACTaGAGCGGGTCCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAVCFLY*SGSFVE
Trigger: CTCTACAAAGGACCCGCTGCAGTACAAAAAGCACAC...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAGAGTGTTCCTGGAGTTaGTTCCCTGAGAAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITECSWS*FPEKAE
Trigger: CTCAGCTTTCTCAGGGAAGCAACTCCAGGAACACTC...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCGCTGTTTGGGTGACATaGTCAAGGAATTATGTCCGC +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAAVWVT*SRNYVR
Trigger: GCGGACATAATTCCTTGACCATGTCACCCAAACAGC...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGAGTTCCGGTTCTTTTTaGCTCCAGCTTGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWSSGSF*LQLGNS
Trigger: GCTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAACT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGAACACAATGACTGGCTaGTTCCGACGGGGACACTTA +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWNTMTG*FRRGHL
Trigger: TAAGTGTCCCCGTCGGAACCAGCCAGTCATTGTGTT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCTCATCCACTCTTCCTaGTCTTCATACAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYLIHSS*SSYSRP
Trigger: TGGGCGACTGTATGAAGACCAGGAAGAGTGGATGAG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCATCAGGCTGTTTGGGTaGCATGGTCAAGGAATTATG +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAIRLFG*HGQGIM
Trigger: CATAATTCCTTGACCATGTCACCCAAACAGCCTGAT...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGCTTAAATACACACTGTaGAGAATCATCAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLLKYTL*RIIRQG
Trigger: TCCTTGCCTGATGATTCTTCACAGTGTGTATTTAAG...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGAGCTGCACAGGCAAGTaGAGACTAGAATCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWSCTGK*RLESCL
Trigger: AAGACAGGATTCTAGTCTTCACTTGCCTGTGCAGCT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCAACATGAGCCTTCCTaGCCACTCTGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYQHEPS*PLCFWF
Trigger: AAACCAAAAGCAGAGTGGCCAGGAAGGCTCATGTTG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCAGGCCAGTTTTTCTATaGATGGTGCTACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRARPVFL*MVLQTA
Trigger: TGCTGTCTGTAGCACCATCCATAGAAAAACTGGCCT...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGGACAGCATCCACCCATaGTCTTTGGATGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLDSIHP*SLDESQ
Trigger: TTGGGATTCATCCAAAGACCATGGGTGGATGCTGTC...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTCCGGTTCAGAAGAAATaGCAAAGGGAGTCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFPVQKK*QRESSV
Trigger: GACACTAGACTCCCTTTGCCATTTCTTCTGAACCGG...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACTGGAAGGAGTGTTCCTaGAGTTGCTTCCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYWKECS*SCFPEK
Trigger: TTTCTCAGGGAAGCAACTCCAGGAACACTCCTTCCA...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGCTCCTCTCTATATCTTaGGAGCTATTTTTCATGCCA +
Preference number: 4 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLLLSIS*ELFFMP
Trigger: TGGCATGAAAAATAGCTCCCAAGATATAGAGAGGAG...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTGCTGCTGTGTACCATTaGCAACCTTCACATCTATCA +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFAAVYH*QPSHLS
Trigger: TGATAGATGTGAAGGTTGTCAATGGTACACAGCAGC...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCACAGATGCTAGAGAATaGCCTTTTAAGGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRATDARE*PFKATE
Trigger: TTCCGTTGCCTTAAAAGGTCATTCTCTAGCATCTGT...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCTACTCACTCTTATGTTaGGAGGAAATCTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAYSLLC*EEIWPT
Trigger: TGTAGGCCAGATTTCCTCTCAACATAAGAGTGAGTA...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACATTATCCCCAGGCTGTTaGGATCTATCTTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITLSPGC*DLSSPV
Trigger: AACTGGAGAAGATAGATCTCAACAGCCTGGGGATAA...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCAGGACTCAATTAACTaGGCTATCTTTCTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYQDSIN*AIFLRN
Trigger: GTTGCGCAGAAAGATAGCTCAGTTAATTGAGTCCTG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAGCCAAGACCAGTGAGTaGCACGTTGATTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITAKTSE*HVDFLN
Trigger: ATTCAAGAAATCAACGTGTCACTCACTGGTCTTGGC...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCAGTTGCCTTGCAACCTaGAAAATTGAAGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRASCLAT*KIEGSL
Trigger: CAAGGATCCTTCAATTTTTCAGGTTGCAAGGCAACT...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGTACTGCCGCAGTAGGTaGATGATCCCAAAATATGAC +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWYCRSR*MIPKYD
Trigger: GTCATATTTTGGGATCATGCACCTACTGCGGCAGTA...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAAATTCACTGCTTCCTTaGTGTCCATACAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITNSLLP*CPYKRP
Trigger: TGGCCTCTTGTATGGACAGCAAGGAAGCAGTGAATT...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCAAGCAAAACTCTTTGTaGTATACGGAACACTCGGGA +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAKQNSL*YTEHSG
Trigger: TCCCGAGTGTTCCGTATAGCACAAAGAGTTTTGCTT...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTTTACCTTCATCACATTaGTCACTTCTGGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFLPSSH*SLLASP
Trigger: TGGACTCGCCAGAAGTGACCAATGTGATGAAGGTAA...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGTCTTCTACTGAATCTTaGTGGAGGGACTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWSSTES*WRDSKP
Trigger: TGGTTTGGAGTCCCTCCACCAAGATTCAGTAGAAGA...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTTTATTGCTCACAAAATaGAAATTGGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTLLLTK*KLGGAA
Trigger: TGCAGCTCCTCCCAATTTTCATTTTGTGAGCAATAA...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACACGGCTAGGTTCAGCTTaGATTTTGTTTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITRLGSA*ILFFFL
Trigger: CAGGAAGAAAAACAAAATTCAAGCTGAACCTAGCCG...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTATATTCCTACAGTTCTaGAGAATTAGCAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTIFLQF*RISSPL
Trigger: GAGAGGACTGCTAATTCTTCAGAACTGTAGGAATAT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAGTCTCAGATCCCACTaGAAATCTGTTCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYSLRSH*KSVQFH
Trigger: GTGAAACTGAACAGATTTTCAGTGGGATCTGAGACT...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTCAGCGTTACTATCAATaGAAACTAGGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFQRYYQ*KLGIVF
Trigger: GAACACGATCCCTAGTTTTCATTGATAGTAACGCTG...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGAGTTTCAGAACAAGCTaGTGTGTACCATTGACAACC +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWSFRTS*CVPLTT
Trigger: GGTTGTCAATGGTACACAGCAGCTTGTTCTGAAACT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAGCAAATGGGAGTAACTaGTGTGAGCTACTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITANGSN*CELLCK
Trigger: TTTACACAGTAGCTCACAGCAGTTACTCCCATTTGC...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGTTGTGTTCCTCTGTCTaGTTATCTTCCTGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLLCSSV*LSSCFL
Trigger: TAGGAAGCAGGAAGATAACCAGACAGAGGAACACAA...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACTTTATGAGCCTACCTTaGACTGTGTTTGCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYFMSLP*TVFASF
Trigger: AAAACTCGCAAACACAGTTCAAGGTAGGCTCATAAA...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACGTTGATGCTGCGAAGTaGAAATACTTCATGTTGACA +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYVDAAK*KYFMLT
Trigger: TGTCAACATGAAGTATTTTCACTTCGCAGCATCAAC...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTAACACTTTTGCACTTTaGACATGTAGCAATGGTCAT +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTNTFAL*TCSNGH
Trigger: ATGACCATTGCTACATGTGCAAAGTGCAAAAGTGTT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACATGGTTTTCCTATTACTaGCATCTGCAAAGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITWFSYY*HLQSVD
Trigger: ATCCACACTTTGCAGATGGCAGTAATAGGAAAACCA...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTGCTTATTTAATTCACTaGTTCCTTGCTGTCCATACA +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTAYLIH*FLAVHT
Trigger: TGTATGGACAGCAAGGAAGCAGTGAATTAAATAAGC...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTGAAAGCAGTCTCCCTTaGTTATTTAATTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTESSLP*LFNSLL
Trigger: AAGCAGTGAATTAAATAAGCAAGGGAGACTGCTTTC...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTGCCATCTGCAAAGTGTaGATATATTTGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTAICKV*IYLLMS
Trigger: ACTCATCAACAAATATATCCACACTTTGCAGATGGC...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGCCTTCAAATACATTCTaGGGTCCAATCACATACTTC +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWPSNTF*GPITYF
Trigger: GAAGTATGTGATTGGACCCCAGAATGTATTTGAAGG...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGGTTTTATTTCCAACATaGGTCGCACTGGAATTATTG +
Preference number: 4 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLVLFPT*VALELL
Trigger: CAATAATTCCAGTGCGACTCATGTTGGAAATAAAAC...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR TCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCCTCTGAATGGATTATaGAAGATCAGTATGTACTCA +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYPLNGL*KISMYS
Trigger: TGAGTACATACTGATCTTTCATAATCCATTCAGAGG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTCCTATTACTGCCATCTaGAAAGTGTGGATATATTTG +
Preference number: 4 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFPITAI*KVWIYL
Trigger: CAAATATATCCACACTTTGCAGATGGCAGTAATAGG...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCCTCTCTCCAGAAAAATaGATATGTACCAATTTGCAT +
Preference number: 4 (lower is better)
Translates to: GSLQKNAYVPICMYNFRALSPEK*ICTNLH
Trigger: ATGCAAATTGGTACATATGCATTTTTCTGGAGAGAG...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCAAACTGCAAAGGATTaGAATTCCATCTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYQTAKD*NSIYWN
Trigger: ATTCCAGTAGATGGAATTGCAATCCTTTGCAGTTTG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACGGGAGCTATTTTTCATaGCACAGGAGTACAATATAT +
Preference number: 4 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYGSYFS*HRSTIY
Trigger: ATATATTGTACTCCTGTGGCATGAAAAATAGCTCCC...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTACAATAGTATTTGCCTaGCTTAAAGTTCCTTACCTT +
Preference number: 4 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTTIVFA*LKVPYL
Trigger: AAGGTAAGGAACTTTAAGCCAGGCAAATACTATTGT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACATTGTCTTTATTTGCATaGAGAGAGAAACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITLSLFA*REKPDS
Trigger: ACTGTCAGGTTTCTCTCTCCATGCAAATAAAGACAA...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGATCTGCCCCTCTGAATaGATTATGAAAGATCAGTAT +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWICPSE*IMKDQY
Trigger: ATACTGATCTTTCATAATCCATTCAGAGGGGCAGAT...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
3UTR CAA 72 bp CATATGAAACCCTTTTCACAACTTTATGAGCCTACCTaGAACTGTGTTTGCGAGTTTTACCTATGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: HMKPFSQLYEPT*NCVCEFYLCCK
Trigger: CTTACAACATAGGTAAAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAACTGATAAGGAAATATaGCTGTGTGTTTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITTDKEI*LCVSPN
Trigger: ATTTGGTGAAACACACAGGCATATTTCCTTATCAGT...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAGTTGAAAACTATCAATaGCTACGAGTTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITVENYQ*LRVFQH
Trigger: ATGTTGGAAAACTCGTAGGCATTGATAGTTTTCAAC...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACACATTTTGTTGATTCCTaGCATTTTCTAGTAATCGCA +
Preference number: 4 (lower is better)
Translates to: QFACTISEPSNTFWGPITHFVDS*HFLVIA
Trigger: TGCGATTACTAGAAAATGGCAGGAATCAACAAAATG...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR GCA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGGTAATGAGAACAAACTaGAAAGGATTGCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLVMRTN*KGLQFH
Trigger: ATGGAATTGCAATCCTTTGCAGTTTGTTCTCATTAC...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CCA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGCAAGATGTTCTCGACTaGGGATACAAAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWQDVLD*GYKIEY
Trigger: ATATTCAATTTTGTATCCCCAGTCGAGAACATCTTG...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 90 bp GTGGGTGCCTGGAGGTGGGGTGAGGCCACCACCCCTGGGCTGTCATaGGGCAAACAGACAAGCAGACTCAGGGTTCCACCCTTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: VGAWRWGEATTPGLS*GKQTSRLRVPPLPS
Trigger: GCTAGGCAAGGGTGGAACCCTGAGTCTGCTTGTCTGTTTGCCCCATGACAGCCCAGGGGTGGTGGCCTCACCCCACCTCCAGGCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 90 bp CTCTTCTCAGGCGTGGACTGCCATGAGTTTCACAACCTCAGGCCCTaGTGTAGGCTTCTACATCAGAACCCTGGGCGTCAGCAAGGCGCT +
Preference number: 5 (lower is better)
Translates to: LFSGVDCHEFHNLRP*CRLLHQNPGRQQGA
Trigger: AGCGCCTTGCTGACGCCCAGGGTTCTGATGTAGAAGCCTACACCAGGGCCTGAGGTTGTGAAACTCATGGCAGTCCACGCCTGAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326756.4
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 90 bp GAGTGCTCTCCCAGAGGCTGGCTGCTTGTCAATCACGGAGCACCTTaGCCCAAGTCAGATGGAAAGAGTGCCTGCATGAGCAGGTTCCTA +
Preference number: 5 (lower is better)
Translates to: ECSPRGWLLVNHGAP*PKSDGKSACMSRFL
Trigger: TAGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGCAGCCAGCCTCTGGGAGAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAAGGGTTTGTGCTTCTaGTCTATTTGGCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSKGLCF*SIWPRC
Trigger: GCACCTCGGCCAAATAGACAAGAAGCACAAACCCTT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAAGTTCCGGTTCTTTTaGGCTCCAGCTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSKFRFF*APAWQQ
Trigger: CTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAACTT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTTATCCCCAGGCTGTaGAGATCTATCTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PWREGNASWGCLGVVPSVLIPRL*RSIFSS
Trigger: ACTGGAGAAGATAGATCTCAACAGCCTGGGGATAAG...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 90 bp TCCCATGGGCTCTTCCTTCTCTTTCAGGCCTTCTCTTCTCAGGCGTaGACTGCCATGAGTTTCACAACCTCAGGCCCTGGTGTAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SHGLFLLFQAFSSQA*TAMSFTTSGPGVGF
Trigger: GAAGCCTACACCAGGGCCTGAGGTTGTGAAACTCATGGCAGTCCACGCCTGAGAAGAGAAGGCCTGAAAGAGAAGGAAGAGCCCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326756.4
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTTAGCATCAGGCTGTTaGGGTGACATGGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSLASGC*GDMVKE
Trigger: TTCCTTGACCATGTCACCCAAACAGCCTGATGCTAA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTATTACCTTCATCACATaGGTCACTTCTGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSITFIT*VTSGES
Trigger: GGACTCGCCAGAAGTGACCAATGTGATGAAGGTAAT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTTTCTATCAAATGCCGTaGGCCATGACTCATCCACTC +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSFYQMP*AMTHPL
Trigger: GAGTGGATGAGTCATGGCCAACGGCATTTGATAGAA...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGCTCTAGCTGCTGTGTACCATaGACAACCTTCACATCTATC +
Preference number: 5 (lower is better)
Translates to: GGREMQVGAASGLCHLCSSCCVP*TTFTSI
Trigger: GATAGATGTGAAGGTTGTCAATGGTACACAGCAGCT...AGAGCACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp TGGGCTCTTCCTTCTCTTTCAGGCCTTCTCTTCTCAGGCGTGGACTaGCATGAGTTTCACAACCTCAGGCCCTGGTGTAGGCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: WALPSLSGLLFSGVD*HEFHNLRPWCRLLH
Trigger: ATGTAGAAGCCTACACCAGGGCCTGAGGTTGTGAAACTCATGGCAGTCCACGCCTGAGAAGAGAAGGCCTGAAAGAGAAGGAAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326756.4
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 90 bp AGGCTGGCTGCTTGTCAATCACGGAGCACCTTGGCCCAAGTCAGATaGAAAGAGTGCCTGCATGAGCAGGTTCCTATGTTACCTCGAAAC +
Preference number: 5 (lower is better)
Translates to: RLAACQSRSTLAQVR*KECLHEQVPMLPRN
Trigger: GTTTCGAGGTAACATAGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGCAGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS-3UTR CAA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGCAGAGAAGGAACAGGTaGCAGGTGATGCAGCAAATG +
Preference number: 5 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMQRRNR*QVMQQM
Trigger: CATTTGCTGCATCACCTGCAACCTGTTCCTTCTCTG...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp CCCTGGAGGGAGGGAAATGCAAGTTGGGGCTGCCTCGGGGTTGTGCCATCTGTGAATCTCTTTTTGTCTTaGCAAAAAGGTACGTTCCCT +
Preference number: 5 (lower is better)
Translates to: PWREGNASWGCLGVVPSVNLFLS*QKGTFP
Trigger: AGGGAACGTACCTTTTTGCAAAGACAAAAAGAGATT...CACAGATGGCACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp ATCACGGAGCACCTTGGCCCAAGTCAGATGGAAAGAGTGCCTGCATaGGCAGGTTCCTATGTTACCTCGAAACTTCTCAAAGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: ITEHLGPSQMERVPA*AGSYVTSKLLKASL
Trigger: AAGGCTGGCTTTGAGAAGTTTCGAGGTAACATAGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 90 bp AAAAGCTTCCCAGGTGATTCTCATATGCAGCTATGCAGCCAAGGCTaGAAACCACCTGATACTACAGGTGCAGGTGCACTTGGGAATGGC +
Preference number: 5 (lower is better)
Translates to: KSFPGDSHMQLCSQG*KPPDTTGAGALGNG
Trigger: GCCATTCCCAAGTGCACCTGCACCTGTAGTATCAGGTGGTTTGCAGCCTTGGCTGCATAGCTGCATATGAGAATCACCTGGGAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 90 bp GCTGGGGCAGGGTATAGCTGCTGTACCCATGAAGATCACATGAAATaGAGTGGCAGGGTTTACAGTTCCAACTCTGATCCTGTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: AGAGYSCCTHEDHMK*SGRVYSSNSDPVPH
Trigger: ATGAGGGACAGGATCAGAGTTGGAACTGTAAACCCTGCCACTCCATTTCATGTGATCTTCATGGGTACAGCAGCTATACCCTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp ACAGTGGGCAAGGAAGTTGTGCTAGTCCACAGGAGGGCCGGTTCAGAAGAAATGGGGCGCAGCTACTTCTaGGGTGCATACTTAATTATC +
Preference number: 5 (lower is better)
Translates to: TVGKEVVLVHRRAGSEEMGRSYF*GAYLII
Trigger: GATAATTAAGTATGCACCCAAGAAGTAGCTGCGCCC...CATTTCTTCTGAACCGGCCCTCCTGTGGACTAGCACAACTTCCTTGCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp GTTTTGAAGTTCCGGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTTaGCTGGCCGTTTCGCACCTGCCCTTTCATGTACTCTCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: VLKFRFFLAPAWQQL*LAVSHLPFHVLSSC
Trigger: ACACGAAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAACTTCAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp TCATTGCTGGGGCAGGGTATAGCTGCTGTACCCATGAAGATCACATaGAATGGAGTGGCAGGGTTTACAGTTCCAACTCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SLLGQGIAAVPMKIT*NGVAGFTVPTLILS
Trigger: GGACAGGATCAGAGTTGGAACTGTAAACCCTGCCACTCCATTTCATGTGATCTTCATGGGTACAGCAGCTATACCCTGCCCCAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 90 bp GCTTGTCAATCACGGAGCACCTTGGCCCAAGTCAGATGGAAAGAGTaGCTGCATGAGCAGGTTCCTATGTTACCTCGAAACTTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ACQSRSTLAQVRWKE*LHEQVPMLPRNFSK
Trigger: CTTTGAGAAGTTTCGAGGTAACATAGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 90 bp CATGCTTGGGATCCTAGATTTCCATCTGAAACCAAGTGTACTGCTTaGGCAGCAGAATGGACCAAGACAGCTGCAGGAGACAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: HAWDPRFPSETKCTA*AAEWTKTAAGDSLI
Trigger: AATCAGGCTGTCTCCTGCAGCTGTCTTGGTCCATTCTGCTGCCCAAGCAGTACACTTGGTTTCAGATGGAAATCTAGGATCCCAAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCCCCAAGAGGCTGTGCTaGTGCAGGGGGTGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GSLQKNAYVPICMYNFRAPKRLC*CRGWAF
Trigger: AAAGGCCCACCCCCTGCACAAGCACAGCCTCTTGGG...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp GCACTTTGCACATGTAGCAATGGTCATCATGGCAGCCTCTGCCTCTaGGCCTTGATACAAAAGGGTTTGTGCTTCTTGTCTATTTGGCCG +
Preference number: 5 (lower is better)
Translates to: ALCTCSNGHHGSLCL*ALIQKGLCFLSIWP
Trigger: CGGCCAAATAGACAAGAAGCACAAACCCTTTTGTATCAAGGCTCAGAGGCAGAGGCTGCCATGATGACCATTGCTACATGTGCAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS GCA 90 bp ACTGGGATCTTTAAAAGCTTCCCAGGTGATTCTCATATGCAGCTATaGAGCCAAGGCTGCAAACCACCTGATACTACAGGTGCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: TGIFKSFPGDSHMQL*SQGCKPPDTTGAGA
Trigger: TGCACCTGCACCTGTAGTATCAGGTGGTTTGCAGCCTTGGCTGCATAGCTGCATATGAGAATCACCTGGGAAGCTTTTAAAGATCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 90 bp GTGGGGATACTGGGATCTTTAAAAGCTTCCCAGGTGATTCTCATATaGAGCTATGCAGCCAAGGCTGCAAACCACCTGATACTACAGGTG +
Preference number: 5 (lower is better)
Translates to: VGILGSLKASQVILI*SYAAKAANHLILQV
Trigger: CACCTGTAGTATCAGGTGGTTTGCAGCCTTGGCTGCATAGCTGCATATGAGAATCACCTGGGAAGCTTTTAAAGATCCCAGTATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 90 bp CTGCAAGGTATGCTGACAGGTGCTTCACATGTAGCCTCTATGATGTaGGCATTCTCAGAGGAATTAAGAACCCTCAACACAGCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LQGMLTGASHVASMM*AFSEELRTLNTAPL
Trigger: CAAAGGGGCTGTGTTGAGGGTTCTTAATTCCTCTGAGAATGCCCACATCATAGAGGCTACATGTGAAGCACCTGTCAGCATACCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 90 bp ATTACCTTCATCACATTGGTCACTTCTGGCGAGTCCACATCAGGGTaGTTTAACACAATGACTGGCTGGTTCCGACGGGGACACTTAATC +
Preference number: 5 (lower is better)
Translates to: ITFITLVTSGESTSG*FNTMTGWFRRGHLI
Trigger: GATTAAGTGTCCCCGTCGGAACCAGCCAGTCATTGTGTTAAACCACCCTGATGTGGACTCGCCAGAAGTGACCAATGTGATGAAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTATACTCACTCTTATGTaGAGAGGAAATCTGGCCTAC +
Preference number: 5 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAILTLM*RGNLAY
Trigger: GTAGGCCAGATTTCCTCTCAACATAAGAGTGAGTAT...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp TTGTCTATTTGGCCGAGGTGCTCCATTAGCATCAGGCTGTTTGGGTaGCATGGTCAAGGAATTATGTCCGCCGTTCAAGTGTGTAGTGTA +
Preference number: 5 (lower is better)
Translates to: LSIWPRCSISIRLFG*HGQGIMSAVQVCSV
Trigger: TACACTACACACTTGAACGGCGGACATAATTCCTTGACCATGTCACCCAAACAGCCTGATGCTAATGGAGCACCTCGGCCAAATAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS GCA 90 bp AATTATTGCTCACAAAATGAAAATTGGGAGGAGCTGCACCGAGGCTaGACTGGAAGCAGACATACATACCGTCCTTCCCTGTACCCTTCT +
Preference number: 5 (lower is better)
Translates to: NYCSQNENWEELHRG*TGSRHTYRPSLYPS
Trigger: AGAAGGGTACAGGGAAGGACGGTATGTATGTCTGCTTCCAGTGCAGCCTCGGTGCAGCTCCTCCCAATTTTCATTTTGTGAGCAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp GGAGTGGCAGGGTTTACAGTTCCAACTCTGATCCTGTCCCTCATTTaGAGGGTCCTTCAGCAAATAATTTTTCTCTGTGCATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: GVAGFTVPTLILSLI*RVLQQIIFLCALPS
Trigger: GCTTGGCAATGCACAGAGAAAAATTATTTGCTGAAGGACCCTGCAAATGAGGGACAGGATCAGAGTTGGAACTGTAAACCCTGCCACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 90 bp TTTGAATGTGGCTCTACCATACTCATTGCTGGGGCAGGGTATAGCTaGTGTACCCATGAAGATCACATGAAATGGAGTGGCAGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: FECGSTILIAGAGYS*CTHEDHMKWSGRVY
Trigger: GTAAACCCTGCCACTCCATTTCATGTGATCTTCATGGGTACAGCAGCTATACCCTGCCCCAGCAATGAGTATGGTAGAGCCACATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 90 bp CACGCACCAAAGGCAAGAGGCACGGTGTGTCACAGATGTGCTCTCTaGACTGAGTCTTATCTTTCTTCAAAAGAAAGACCTGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: HAPKARGTVCHRCAL*TESYLSSKERPGNS
Trigger: GCTATTTCCAGGTCTTTCTTTTGAAGAAAGATAAGACTCAGTCCAGAGAGCACATCTGTGACACACCGTGCCTCTTGCCTTTGGTGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp GTCCTGACATCTGTTGGTAGAGAGGGGAGTGGAAGGAGTGTTCCTGGAGTTGCTTTTAATCTCCTCGTGTaGAAGGGTGTGCTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: VLTSVGREGSGRSVPGVAFNLLV*KGVLFV
Trigger: TACAAAAAGCACACCCTTCAACACGAGGAGATTAAA...AGCAACTCCAGGAACACTCCTTCCACTCCCCTCTCTACCAACAGATGTCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAGGAGGGAAATGCAAGTaGGGGCTGCCTCGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: QFACTISEPSNTFWGPITGGKCK*GLPRGC
Trigger: ACAACCCCGAGGCAGCCCCAACTTGCATTTCCCTCC...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp GTAAGCTGTCTATTACCAGTAATACCACCATCATTCGGAGGTTTCTaGAGAGTACCTGTGGAATGGCCAAGACCAGTGAGTGACACGTTG +
Preference number: 5 (lower is better)
Translates to: VSCLLPVIPPSFGGF*RVPVEWPRPVSDTL
Trigger: CAACGTGTCACTCACTGGTCTTGGCCATTCCACAGGTACTCTTCAGAAACCTCCGAATGATGGTGGTATTACTGGTAATAGACAGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp AGAACATCCCAATCTCTAGTTGCTTCTATCAAATGCCGTTGGCCATaGCTCATCCACTCTTCCTGGTCTTCATACAGTCGCCCACAAAAC +
Preference number: 5 (lower is better)
Translates to: RTSQSLVASIKCRWP*LIHSSWSSYSRPQN
Trigger: GTTTTGTGGGCGACTGTATGAAGACCAGGAAGAGTGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp GTCTTCTCCCCACCCTGTCTACAGGGAGTATTTTGGAGATTGACTTaGCACTGCTGTGCACATCAACTGAGTCTACATCAGGAAACAAAG +
Preference number: 5 (lower is better)
Translates to: VFSPPCLQGVFWRLT*HCCAHQLSLHQETK
Trigger: CTTTGTTTCCTGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGGGGAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 90 bp TTCCAACATGAGTCGCACTGGAATTATTGCTCACAAAATGAAAATTaGGAGGAGCTGCACCGAGGCTGCACTGGAAGCAGACATACATAC +
Preference number: 5 (lower is better)
Translates to: FQHESHWNYCSQNEN*EELHRGCTGSRHTY
Trigger: GTATGTATGTCTGCTTCCAGTGCAGCCTCGGTGCAGCTCCTCCCAATTTTCATTTTGTGAGCAATAATTCCAGTGCGACTCATGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 90 bp AATTCACTGCTTCCTTGCTGTCCATACAAGAGGCCAGTTTTTCTATaGATGGTGCTACAGACAGCACTCTCTTTTCTCAGTTTAGGCCGC +
Preference number: 5 (lower is better)
Translates to: NSLLPCCPYKRPVFL*MVLQTALSFLSLGR
Trigger: GCGGCCTAAACTGAGAAAAGAGAGTGCTGTCTGTAGCACCATCCATAGAAAAACTGGCCTCTTGTATGGACAGCAAGGAAGCAGTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp TTTTGGCTCCAGCTTGGCAACAGCTTTGACTGGCCGTTTCGCACCTaGCCTTTCATGTACTCTCTTCGTGTGTTTGACAATATAATCATT +
Preference number: 5 (lower is better)
Translates to: FWLQLGNSFDWPFRT*PFMYSLRVFDNIII
Trigger: AATGATTATATTGTCAAACACACGAAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp GCATACATGCTACATGGACCACCACATACATTTCTGTTCAGGAGATaGCCAGCAAGCTCAGTGTTAGTTGACTGTGACTGCATCGTTTTT +
Preference number: 5 (lower is better)
Translates to: AYMLHGPPHTFLFRR*PASSVLVDCDCIVF
Trigger: AAAAACGATGCAGTCACAGTCAACTAACACTGAGCTTGCTGGGCATCTCCTGAACAGAAATGTATGTGGTGGTCCATGTAGCATGTATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAAGCTTGGCAACAGCTTaGACTGGCCGTTTCGCACCT +
Preference number: 5 (lower is better)
Translates to: QFACTISEPSNTFWGPITSLATA*TGRFAP
Trigger: AGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCT...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCAAAATTGAAGGATCCTaGAGACAGCGGCTAGGTTCA +
Preference number: 5 (lower is better)
Translates to: ESSVHESKGSRREKTASTKIEGS*RQRLGS
Trigger: TGAACCTAGCCGCTGTCTCAAGGATCCTTCAATTTT...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp TTTCTTCCAGCGGAAACAGTTTCAGAACAAGCTGCTGTGTACCATTaGCAACCTTCACATCTATCAACTGGGCTAAACAGTTTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FLPAETVSEQAAVYH*QPSHLSTGLNSLQG
Trigger: TCCCTGCAAACTGTTTAGCCCAGTTGATAGATGTGAAGGTTGTCAATGGTACACAGCAGCTTGTTCTGAAACTGTTTCCGCTGGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp TTCTTTATATACTGCCGCAGTAGGTGCATGATCCCAAAATATGACTaGTTTCAGCTCTCTGACATTCCAGGTAACATTCCTGCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: FFIYCRSRCMIPKYD*FQLSDIPGNIPACS
Trigger: GCTACAGGCAGGAATGTTACCTGGAATGTCAGAGAGCTGAAAGCAGTCATATTTTGGGATCATGCACCTACTGCGGCAGTATATAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp CCAGAGAAGGAACAGGTTGCAGGTGATGCAGCAAATGGGAGTAACTaGTGTGAGCTACTGTGTAAATTTCTTCCACTTTCAGCAAAACAA +
Preference number: 5 (lower is better)
Translates to: PEKEQVAGDAANGSN*CELLCKFLPLSAKQ
Trigger: TTGTTTTGCTGAAAGTGGAAGAAATTTACACAGTAGCTCACAGCAGTTACTCCCATTTGCTGCATCACCTGCAACCTGTTCCTTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp CTTCTGGAAAGCAGTCTCCCTTGCTTATTTAATTCACTGCTTCCTTaGTGTCCATACAAGAGGCCAGTTTTTCTATGGATGGTGCTACAG +
Preference number: 5 (lower is better)
Translates to: LLESSLPCLFNSLLP*CPYKRPVFLWMVLQ
Trigger: CTGTAGCACCATCCATAGAAAAACTGGCCTCTTGTATGGACAGCAAGGAAGCAGTGAATTAAATAAGCAAGGGAGACTGCTTTCCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp GTTTACTTATTTGCCCTTGGAGGAAAGAACATCCCAATCTCTAGTTaGTTCTATCAAATGCCGTTGGCCATGACTCATCCACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VYLFALGGKNIPISS*FYQMPLAMTHPLFL
Trigger: CAGGAAGAGTGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTTCTTTCCTCCAAGGGCAAATAAGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp CTGTTCAGGAGATGCCCAGCAAGCTCAGTGTTAGTTGACTGTGACTaGATCGTTTTTGGATGTAGAAGCAAACTTAAGCAGCTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LFRRCPASSVLVDCD*IVFGCRSKLKQLFS
Trigger: TGAAAAGAGCTGCTTAAGTTTGCTTCTACATCCAAAAACGATGCAGTCACAGTCAACTAACACTGAGCTTGCTGGGCATCTCCTGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 90 bp GTTAATGTGAAAAGGAAAGGTGGGTGGCCAATTATATCGCATACATaGTACATGGACCACCACATACATTTCTGTTCAGGAGATGCCCAG +
Preference number: 5 (lower is better)
Translates to: VNVKRKGGWPIISHT*YMDHHIHFCSGDAQ
Trigger: CTGGGCATCTCCTGAACAGAAATGTATGTGGTGGTCCATGTAGCATGTATGCGATATAATTGGCCACCCACCTTTCCTTTTCACATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 90 bp CAGTTATCTGCTTCTTCCCTGATTAACAGGTCTGGAGAAGCTATATaGCTTTTTGAAGATCACAGAGTTGGTGAACAGCTGCAACTGGGT +
Preference number: 5 (lower is better)
Translates to: QLSASSLINRSGEAI*LFEDHRVGEQLQLG
Trigger: ACCCAGTTGCAGCTGTTCACCAACTCTGTGATCTTCAAAAAGCCATATAGCTTCTCCAGACCTGTTAATCAGGGAAGAAGCAGATAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTCTTTTTGGCTCCAGCTaGGCAACAGCTTTGACTGGC +
Preference number: 5 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFLFGSS*ATALTG
Trigger: GCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAG...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGTGGGAGGTCTCCATTTaGTTGATTCCTGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLWEVSI*LIPAIF
Trigger: GAAAATGGCAGGAATCAACAAAATGGAGACCTCCCA...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp ACAACTAGTTCTGCTGGTGCAACAACTGTCAATGGCATACCTGGCTaGACAGGTTCTTTTGCAGGGGATAACACTTCTACTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: TTSSAGATTVNGIPG*TGSFAGDNTSTSTF
Trigger: AAATGTTGAAGTAGAAGTGTTATCCCCTGCAAAAGAACCTGTTCAGCCAGGTATGCCATTGACAGTTGTTGCACCAGCAGAACTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp CCTCGAAACTTCTCAAAGCCAGCCTTCAGTTATCTGCTTCTTCCCTaGTTAACAGGTCTGGAGAAGCTATATGGCTTTTTGAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PRNFSKPAFSYLLLP*LTGLEKLYGFLKIT
Trigger: TGTGATCTTCAAAAAGCCATATAGCTTCTCCAGACCTGTTAATCAGGGAAGAAGCAGATAACTGAAGGCTGGCTTTGAGAAGTTTCGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 90 bp GAGAAGCTATATGGCTTTTTGAAGATCACAGAGTTGGTGAACAGCTaGAACTGGGTCCAATCTTACATTCTTTGTTTTCTGCTACCCTGC +
Preference number: 5 (lower is better)
Translates to: EKLYGFLKITELVNS*NWVQSYILCFLLPC
Trigger: GCAGGGTAGCAGAAAACAAAGAATGTAAGATTGGACCCAGTTGCAGCTGTTCACCAACTCTGTGATCTTCAAAAAGCCATATAGCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp AGGTGGCCCTTAATGAAGGCTTACAAGATGTTCTCGACTGGGGATACAAAATTGGCTCTGGGTTTTGTTTaGAAGTTCCGGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RWPLMKAYKMFSTGDTKLALGFV*KFRFFL
Trigger: CAAAAAGAACCGGAACTTCAAAACAAAACCCAGAGC...CAATTTTGTATCCCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCGACGATGTGCACTATTaGAAGCCAAAGATGACGGCT +
Preference number: 5 (lower is better)
Translates to: GSLQKNAYVPICMYNFRADDVHY*KPKMTA
Trigger: AGCCGTCATCTTTGGCTTCAAATAGTGCACATCGTC...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GAGTCTAGTGTCCATGAATCAAAGGGATCAAGAAGAGAGAAGACAGCATCCACCTCAGTCTTAGTTGCCTaGCAACCTGAAAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: ESSVHESKGSRREKTASTSVLVA*QPEKLK
Trigger: CTTCAATTTTTCAGGTTGCAAGGCAACTAAGACTGA...GGTGGATGCTGTCTTCTCTCTTCTTGATCCCTTTGATTCATGGACACTAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp TTTGCATGGAGAGAGAAACCTGACAGTTGGTCTGACCACTTATTTTaGAATGTAGTCCGTGGATTGGAAGCTTTTAGAAGCTCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: FAWREKPDSWSDHLF*NVVRGLEAFRSSGF
Trigger: AAACCCAGAGCTTCTAAAAGCTTCCAATCCACGGACTACATTTCAAAATAAGTGGTCAGACCAACTGTCAGGTTTCTCTCTCCATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp GTCTTCATACAGTCGCCCACAAAACCAGCACTTAAATACACACTGTaGAGAATCATCAGGCAAGGAATCCACTACCTGGTAGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: VFIQSPTKPALKYTL*RIIRQGIHYLVVVF
Trigger: AAAAACAACTACCAGGTAGTGGATTCCTTGCCTGATGATTCTTCACAGTGTGTATTTAAGTGCTGGTTTTGTGGGCGACTGTATGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp ACCCTGTCTACAGGGAGTATTTTGGAGATTGACTTGACACTGCTGTaGACATCAACTGAGTCTACATCAGGAAACAAAGGAAGTGATATT +
Preference number: 5 (lower is better)
Translates to: TLSTGSILEIDLTLL*TSTESTSGNKGSDI
Trigger: AATATCACTTCCTTTGTTTCCTGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS-3UTR CAA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGCTGGCCACTCTGCTTTaGGTTTTCCTATTACTGCCA +
Preference number: 5 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWLATLL*VFLLLP
Trigger: TGGCAGTAATAGGAAAACCAAAAGCAGAGTGGCCAG...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTGAGGTGTCTCGATATTaGGGGACATATCTATTGGCC +
Preference number: 5 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFEVSRY*GTYLLA
Trigger: GGCCAATAGATATGTCCCCAAATATCGAGACACCTC...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 90 bp ATGGTCAAGGAATTATGTCCGCCGTTCAAGTGTGTAGTGTATAGCTaGTGTCCAATATCCTTCATCTTATCTGCATTTCTAAAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: MVKELCPPFKCVVYS*CPISFILSAFLKRA
Trigger: GGCTCTTTTTAGAAATGCAGATAAGATGAAGGATATTGGACAGCAGCTATACACTACACACTTGAACGGCGGACATAATTCCTTGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS GCA 90 bp TTTGCCAAACTACCTTGCACTGAGATGACTGAATTGCAAATTGACTaGCATCCTGATGACGAAAAATACTTCCAAATGCTGCCGACAAAT +
Preference number: 5 (lower is better)
Translates to: FAKLPCTEMTELQID*HPDDEKYFQMLPTN
Trigger: ATTTGTCGGCAGCATTTGGAAGTATTTTTCGTCATCAGGATGGCAGTCAATTTGCAATTCAGTCATCTCAGTGCAAGGTAGTTTGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGGCTGAACAGGTTCTTTaGCAGGGGATAACACTTCTA +
Preference number: 5 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLAEQVL*QGITLL
Trigger: TAGAAGTGTTATCCCCTGCAAAAGAACCTGTTCAGC...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCTCTCCTCTCTATATCTaGGGAGCTATTTTTCATGCC +
Preference number: 5 (lower is better)
Translates to: GSLQKNAYVPICMYNFRASPLYI*GAIFHA
Trigger: GGCATGAAAAATAGCTCCCAAGATATAGAGAGGAGA...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp CTATTTGAAGCCAAAGATGACGGCTTCCCACAGGACTCAATTAACTaGGCTATCTTTCTGCGCAACAGTTCAATTGACTTTATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LFEAKDDGFPQDSIN*AIFLRNSSIDFILD
Trigger: GTCTAAAATAAAGTCAATTGAACTGTTGCGCAGAAAGATAGCTCAGTTAATTGAGTCCTGTGGGAAGCCGTCATCTTTGGCTTCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGAATGTAGTCCGTGGATaGGAAGCTTTTAGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLNVVRG*EAFRSS
Trigger: AGAGCTTCTAAAAGCTTCCAATCCACGGACTACATT...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTAAGGATTTTCCATTGTaGTGCACACTAGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTKDFPL*CTLEFG
Trigger: GCCAAATTCTAGTGTGCACAACAATGGAAAATCCTT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp AGCATTTATATGAAGAGCATGTGTAAAACATTCTCAATCTGCCCCTCTGAATGGCTTTATGAGCCTACCTaGAACTGTGTTTGCGAGTTT +
Preference number: 5 (lower is better)
Translates to: SIYMKSMCKTFSICPSEWLYEPT*NCVCEF
Trigger: AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAG...CCATTCAGAGGGGCAGATTGAGAATGTTTTACACATGCTCTTCATATAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTATCCACCCATGGTCTTaGGATGAATCCCAAATGAAA +
Preference number: 5 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFIHPWS*DESQMK
Trigger: TTTCATTTGGGATTCATCCAAAGACCATGGGTGGAT...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTACAAACTGCAAAGGATaGCAATTCCATCTACTGGAA +
Preference number: 5 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTTNCKG*QFHLLE
Trigger: TTCCAGTAGATGGAATTGCAATCCTTTGCAGTTTGT...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp TGCATACTTAATTATCTTTCTTTATATACTGCCGCAGTAGGTGCATaGTCCCAAAATATGACTGCTTTCAGCTCTCTGACATTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: CILNYLSLYTAAVGA*SQNMTAFSSLTFQV
Trigger: TACCTGGAATGTCAGAGAGCTGAAAGCAGTCATATTTTGGGATCATGCACCTACTGCGGCAGTATATAAAGAAAGATAATTAAGTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS TCA 90 bp TTTCACATGATAAAATCCTTAGGAGATATCCTTCTATACAGTTTGTaGTGGGTAGGGGCGCAGCTACTTCTTGGGTGCATACTTAATTAT +
Preference number: 5 (lower is better)
Translates to: FHMIKSLGDILLYSL*WVGAQLLLGCILNY
Trigger: ATAATTAAGTATGCACCCAAGAAGTAGCTGCGCCCCTACCCATCACAAACTGTATAGAAGGATATCTCCTAAGGATTTTATCATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS-3UTR CAA 90 bp TCCAATCGACTACCCAATAAACAATCACTGGTGTCTTTTTCAGGTGCAACAACTTTGATACAAAAGGGTTaGTGCTTCTTGTCTATTTGG +
Preference number: 5 (lower is better)
Translates to: SNRLPNKQSLVSFSGATTLIQKG*CFLSIW
Trigger: CCAAATAGACAAGAAGCACAAACCCTTTTGTATCAA...AGTTGTTGCACCTGAAAAAGACACCAGTGATTGTTTATTGGGTAGTCGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp TTCAGTTTCACAGGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACCATTTGCCTTTTAATTaGACTGGCTTCTTCCGCATT +
Preference number: 5 (lower is better)
Translates to: FSFTGSLQKNAYVPICMYHLPFN*TGFFRI
Trigger: AATGCGGAAGAAGCCAGTCAAATTAAAAGGCAAATG...GTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCCTGTGAAACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp CTACTGAATCTTGGTGGAGGGACTCCAAACCAGAATAAACTAAAAGATAACTTGTTTACTTATTTGCCCTaGGAGGAAAGAACATCCCAA +
Preference number: 5 (lower is better)
Translates to: LLNLGGGTPNQNKLKDNLFTYLP*EERTSQ
Trigger: TTGGGATGTTCTTTCCTCCAAGGGCAAATAAGTAAA...CAAGTTATCTTTTAGTTTATTCTGGTTTGGAGTCCCTCCACCAAGATTCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp GGCTCTCTCCAGAAAAATGCATATGTACCAATTTGCATGTACAATTTCAGAGCCTGCATATGTACCAATTaGCATGTACAATTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: GSLQKNAYVPICMYNFRACICTN*HVQFQS
Trigger: GCTCTGAAATTGTACATGCAAATTGGTACATATGCA...GGCTCTGAAATTGTACATGCAAATTGGTACATATGCATTTTTCTGGAGAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS-3UTR CAA 90 bp ATGAAACCCTTTTCACAACTTTATGAGCCTACCTTGAACTGTGTTTGCGAGTTTTACCTTGAACTGTGTTaGCGAGTTTTACCTATGTTG +
Preference number: 5 (lower is better)
Translates to: MKPFSQLYEPTLNCVCEFYLELC*RVLPML
Trigger: CAACATAGGTAAAACTCGCAAACACAGTTCAAGGTA...AAACTCGCAAACACAGTTCAAGGTAGGCTCATAAAGTTGTGAAAAGGGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp CCATTAAGTGTCATAATCTTTTTGCCAAACTACCTTGCACTGAGATaGCTGAATTGCAAATTGACTGCCATCCTGATGACGAAAAATACT +
Preference number: 5 (lower is better)
Translates to: PLSVIIFLPNYLALR*LNCKLTAILMTKNT
Trigger: AGTATTTTTCGTCATCAGGATGGCAGTCAATTTGCAATTCAGTCATCTCAGTGCAAGGTAGTTTGGCAAAAAGATTATGACACTTAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS-3UTR CAA 90 bp CAATTTGCATGTACAATTTCAGAGCCTTCAAATACATTCTGGGGTCCAATCACAACAAACTACATCTTTTaGGTATTCCTTTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QFACTISEPSNTFWGPITTNYIF*VFLWFR
Trigger: CCTGAACCAAAGGAATACCAAAAAGATGTAGTTTGT...TGTGATTGGACCCCAGAATGTATTTGAAGGCTCTGAAATTGTACATGCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 90 bp AACTACCTTTTCCTCACCCACTTCTCTCAAAGTTCAGCCAAATTGTaGAATATCCCTGTAGCAAATGAATGTGTTTCTGTGATAAATGTT +
Preference number: 5 (lower is better)
Translates to: NYLFLTHFSQSSAKL*NIPVANECVSVINV
Trigger: AACATTTATCACAGAAACACATTCATTTGCTACAGGGATATTTCACAATTTGGCTGAACTTTGAGAGAAGTGGGTGAGGAAAAGGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 90 bp ACATCTTTTTGGTATTCCTTTGGTTCAGGTAACAACATGATATTGTaGATTTTGTCTTTATTTGCATGGAGAGAGAAACCTGACAGTTGG +
Preference number: 5 (lower is better)
Translates to: TSFWYSFGSGNNMIL*ILSLFAWREKPDSW
Trigger: CCAACTGTCAGGTTTCTCTCTCCATGCAAATAAAGACAAAATGCACAATATCATGTTGTTACCTGAACCAAAGGAATACCAAAAAGATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 72 bp GCGCTGCACAAAGAGGCCCGGCAGGCCGGATTCGGGTaGCAGGTCCCGGCGAAGGGGCGTCTACACCGCCGG +
Preference number: 6 (lower is better)
Translates to: ALHKEARQAGFG*QVPAKGRLHRR
Trigger: CCGGCGGTGTAGACGCCCCTTCGCCGGGACCTGGCACCCGAATCCGGCCTGCCGGGCCTCTTTGTGCAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326756.4
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp GCTTCTACATCAGAACCCTGGGCGTCAGCAAGGCGCTaGACAAAGAGGCCCGGCAGGCCGGATTCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: ASTSEPWASARR*TKRPGRPDSGA
Trigger: GGCACCCGAATCCGGCCTGCCGGGCCTCTTTGTGCAGCGCCTTGCTGACGCCCAGGGTTCTGATGTAGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326756.4
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp GCTTCTACATCAGAACCCTGGGCGTCAGCAAGGCGCTaGACAAAGAGGCCCGGTGCCACTTGCCACGACGCC +
Preference number: 6 (lower is better)
Translates to: ASTSEPWASARR*TKRPGATCHDA
Trigger: GGCGTCGTGGCAAGTGGCACCGGGCCTCTTTGTGCAGCGCCTTGCTGACGCCCAGGGTTCTGATGTAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500268.6
CDS CCA 72 bp TGGAGGTGGGGTGAGGCCACCACCCCTGGGCTGTCATaGGGCAAACAGACAAGCAGACTCAGGGTTCCACCC +
Preference number: 6 (lower is better)
Translates to: WRWGEATTPGLS*GKQTSRLRVPP
Trigger: GGGTGGAACCCTGAGTCTGCTTGTCTGTTTGCCCCATGACAGCCCAGGGGTGGTGGCCTCACCCCACCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CCA 72 bp GGCGTGGACTGCCATGAGTTTCACAACCTCAGGCCCTaGTGTAGGCTTCTACATCAGAACCCTGGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: GVDCHEFHNLRP*CRLLHQNPGRQ
Trigger: CTGACGCCCAGGGTTCTGATGTAGAAGCCTACACCAGGGCCTGAGGTTGTGAAACTCATGGCAGTCCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326756.4
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 72 bp CCCAGAGGCTGGCTGCTTGTCAATCACGGAGCACCTTaGCCCAAGTCAGATGGAAAGAGTGCCTGCATGAGC +
Preference number: 6 (lower is better)
Translates to: PRGWLLVNHGAP*PKSDGKSACMS
Trigger: GCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGCAGCCAGCCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp AGAGTGCTCTCCCAGAGGCTGGCTGCTTGTCAATCACGGAGCACCTaGGCCCAAGTCAGATGGAAAGAGTGCCTGCATGAGCAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: RVLSQRLAACQSRST*AQVRWKECLHEQVP
Trigger: AGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGCAGCCAGCCTCTGGGAGAGCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 72 bp TCCCAGAGGCTGGCTGCTTGTCAATCACGGAGCACCTaGGCCCAAGTCAGATGGAAAGAGTGCCTGCATGAG +
Preference number: 6 (lower is better)
Translates to: SQRLAACQSRST*AQVRWKECLHE
Trigger: CTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGCAGCCAGCCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 72 bp GTGTACTGCTTGGGCAGCAGAATGGACCAAGACAGCTaGAGGAGACAGCCTGATTCCTCTGCTTTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: VYCLGSRMDQDS*RRQPDSSAFPG
Trigger: ACCTGGAAAAGCAGAGGAATCAGGCTGTCTCCTGCAGCTGTCTTGGTCCATTCTGCTGCCCAAGCAGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS TCA 72 bp TGGCCGAGGTGCTCCATTAGCATCAGGCTGTTTGGGTaGCATGGTCAAGGAATTATGTCCGCCGTTCAAGTG +
Preference number: 6 (lower is better)
Translates to: WPRCSISIRLFG*HGQGIMSAVQV
Trigger: CACTTGAACGGCGGACATAATTCCTTGACCATGTCACCCAAACAGCCTGATGCTAATGGAGCACCTCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS TCA 72 bp TTCCGGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTTaGCTGGCCGTTTCGCACCTGCCCTTTCATGTACTC +
Preference number: 6 (lower is better)
Translates to: FRFFLAPAWQQL*LAVSHLPFHVL
Trigger: GAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 72 bp ATCACATTGGTCACTTCTGGCGAGTCCACATCAGGGTaGTTTAACACAATGACTGGCTGGTTCCGACGGGGA +
Preference number: 6 (lower is better)
Translates to: ITLVTSGESTSG*FNTMTGWFRRG
Trigger: TCCCCGTCGGAACCAGCCAGTCATTGTGTTAAACCACCCTGATGTGGACTCGCCAGAAGTGACCAATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp GTTCCGGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTaGACTGGCCGTTTCGCACCTGCCCTTTCATGTACT +
Preference number: 6 (lower is better)
Translates to: VPVLFGSSLATA*TGRFAPALSCT
Trigger: AGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp TCATATGCAGCTATGCAGCCAAGGCTGCAAACCACCTaGTACTACAGGTGCAGGTGCACTTGGGAATGGCAA +
Preference number: 6 (lower is better)
Translates to: SYAAMQPRLQTT*YYRCRCTWEWQ
Trigger: TTGCCATTCCCAAGTGCACCTGCACCTGTAGTATCAGGTGGTTTGCAGCCTTGGCTGCATAGCTGCATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 72 bp TCACAAAATGAAAATTGGGAGGAGCTGCACCGAGGCTaGACTGGAAGCAGACATACATACCGTCCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: SQNENWEELHRG*TGSRHTYRPSL
Trigger: CAGGGAAGGACGGTATGTATGTCTGCTTCCAGTGCAGCCTCGGTGCAGCTCCTCCCAATTTTCATTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 72 bp GGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTTGACTaGCCGTTTCGCACCTGCCCTTTCATGTACTCTCTT +
Preference number: 6 (lower is better)
Translates to: GSFWLQLGNSFD*PFRTCPFMYSL
Trigger: AAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 72 bp GCTTGTCAATCACGGAGCACCTTGGCCCAAGTCAGATaGAAAGAGTGCCTGCATGAGCAGGTTCCTATGTTA +
Preference number: 6 (lower is better)
Translates to: ACQSRSTLAQVR*KECLHEQVPML
Trigger: TAACATAGGAACCTGCTCATGCAGGCACTCTTTCCATCTGACTTGGGCCAAGGTGCTCCGTGATTGACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 72 bp CTATTTGGCCGAGGTGCTCCATTAGCATCAGGCTGTTaGGGTGACATGGTCAAGGAATTATGTCCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: LFGRGAPLASGC*GDMVKELCPPF
Trigger: GAACGGCGGACATAATTCCTTGACCATGTCACCCAAACAGCCTGATGCTAATGGAGCACCTCGGCCAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS CAA 72 bp TTGATGCCTGCCCTACAGAGCGACGATGTGCACTATTaGAAGCCAAAGATGACGGCTTCCCACAGGACTCAA +
Preference number: 6 (lower is better)
Translates to: LMPALQSDDVHY*KPKMTASHRTQ
Trigger: TTGAGTCCTGTGGGAAGCCGTCATCTTTGGCTTCAAATAGTGCACATCGTCGCTCTGTAGGGCAGGCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp TGTTTTGAAGTTCCGGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTaGACTGGCCGTTTCGCACCTGCCCTTTCATGTACTCTCTTCGTG +
Preference number: 6 (lower is better)
Translates to: CFEVPVLFGSSLATA*TGRFAPALSCTLFV
Trigger: CACGAAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACCGGAACTTCAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp GCAGGAAGTGAGGGTCTTCTCCCCACCCTGTCTACAGGGAGTATTTaGGAGATTGACTTGACACTGCTGTGCACATCAACTGAGTCTACA +
Preference number: 6 (lower is better)
Translates to: AGSEGLLPTLSTGSI*EIDLTLLCTSTEST
Trigger: TGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGGGGAGAAGACCCTCACTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS TCA 72 bp GGGCAGGGTATAGCTGCTGTACCCATGAAGATCACATaGAATGGAGTGGCAGGGTTTACAGTTCCAACTCTG +
Preference number: 6 (lower is better)
Translates to: GQGIAAVPMKIT*NGVAGFTVPTL
Trigger: CAGAGTTGGAACTGTAAACCCTGCCACTCCATTTCATGTGATCTTCATGGGTACAGCAGCTATACCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp CAGCTTGGCAACAGCTTTGACTGGCCGTTTCGCACCTaGCCTTTCATGTACTCTCTTCGTGTGTTTGACAAT +
Preference number: 6 (lower is better)
Translates to: QLGNSFDWPFRT*PFMYSLRVFDN
Trigger: ATTGTCAAACACACGAAGAGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 72 bp CCTTCAGAGGTAGCTTTTGAAGTTCCCTTTGATGCCTaGCCTACAGAGCGACGATGTGCACTATTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: PSEVAFEVPFDA*PTERRCALFEA
Trigger: GGCTTCAAATAGTGCACATCGTCGCTCTGTAGGGCAGGCATCAAAGGGAACTTCAAAAGCTACCTCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp GAGGGTCTTCTCCCCACCCTGTCTACAGGGAGTATTTaGGAGATTGACTTGACACTGCTGTGCACATCAACT +
Preference number: 6 (lower is better)
Translates to: EGLLPTLSTGSI*EIDLTLLCTST
Trigger: AGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGGGGAGAAGACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp GCTTCTTGTCTATTTGGCCGAGGTGCTCCATTAGCATCAGGCTGTTaGGGTGACATGGTCAAGGAATTATGTCCGCCGTTCAAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: ASCLFGRGAPLASGC*GDMVKELCPPFKCV
Trigger: TACACACTTGAACGGCGGACATAATTCCTTGACCATGTCACCCAAACAGCCTGATGCTAATGGAGCACCTCGGCCAAATAGACAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS CAA 90 bp AAGTTCCCTTTGATGCCTGCCCTACAGAGCGACGATGTGCACTATTaGAAGCCAAAGATGACGGCTTCCCACAGGACTCAATTAACTGAG +
Preference number: 6 (lower is better)
Translates to: KFPLMPALQSDDVHY*KPKMTASHRTQLTE
Trigger: CTCAGTTAATTGAGTCCTGTGGGAAGCCGTCATCTTTGGCTTCAAATAGTGCACATCGTCGCTCTGTAGGGCAGGCATCAAAGGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp GGAGGAAAGAACATCCCAATCTCTAGTTGCTTCTATCAAATGCCGTaGGCCATGACTCATCCACTCTTCCTGGTCTTCATACAGTCGCCC +
Preference number: 6 (lower is better)
Translates to: GGKNIPISSCFYQMP*AMTHPLFLVFIQSP
Trigger: GGGCGACTGTATGAAGACCAGGAAGAGTGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTTCTTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp ATGACTGGCTGGTTCCGACGGGGACACTTAATCAACTaGTCTGGCTTAGCTGCTATCAGTCTTAGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: MTGWFRRGHLIN*SGLAAISLSCL
Trigger: AAGGCAACTAAGACTGATAGCAGCTAAGCCAGATCAGTTGATTAAGTGTCCCCGTCGGAACCAGCCAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp CATGAAATGGAGTGGCAGGGTTTACAGTTCCAACTCTaGTCCTGTCCCTCATTTGCAGGGTCCTTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: HEMEWQGLQFQL*SCPSFAGSFSK
Trigger: TTTGCTGAAGGACCCTGCAAATGAGGGACAGGATCAGAGTTGGAACTGTAAACCCTGCCACTCCATTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 72 bp GCCTTGATACAAAAGGGTTTGTGCTTCTTGTCTATTTaGCCGAGGTGCTCCATTAGCATCAGGCTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: ALIQKGLCFLSI*PRCSISIRLFG
Trigger: CCCAAACAGCCTGATGCTAATGGAGCACCTCGGCCAAATAGACAAGAAGCACAAACCCTTTTGTATCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS CAA 72 bp GCCGCAGAGGTGTCTCGATATTTGGGGACATATCTATaGGCCCCCTTTCACTTCTTAAAGGCTGTAAGTCTG +
Preference number: 6 (lower is better)
Translates to: AAEVSRYLGTYL*APFHFLKAVSL
Trigger: CAGACTTACAGCCTTTAAGAAGTGAAAGGGGGCCAATAGATATGTCCCCAAATATCGAGACACCTCTGCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp AGACTCAGGGTTCCACCCTTGCCTAGCCCTGTGACCTaGGAAACACCAATGATGCTCTCTGTAAGATGTATA +
Preference number: 6 (lower is better)
Translates to: RLRVPPLPSPVT*ETPMMLSVRCI
Trigger: TATACATCTTACAGAGAGCATCATTGGTGTTTCCAAGGTCACAGGGCTAGGCAAGGGTGGAACCCTGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 72 bp AGTAATATCGACATCCTTGTACAAGATTTTATATTCTaGTGGGTGCCTGGAGGTGGGGTGAGGCCACCACCC +
Preference number: 6 (lower is better)
Translates to: SNIDILVQDFIF*WVPGGGVRPPP
Trigger: GGGTGGTGGCCTCACCCCACCTCCAGGCACCCACAAGAATATAAAATCTTGTACAAGGATGTCGATATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp CAGACAAGCAGACTCAGGGTTCCACCCTTGCCTAGCCCTGTGACCTaGGAAACACCAATGATGCTCTCTGTAAGATGTATAATGAGGTAT +
Preference number: 6 (lower is better)
Translates to: QTSRLRVPPLPSPVT*ETPMMLSVRCIMRY
Trigger: ATACCTCATTATACATCTTACAGAGAGCATCATTGGTGTTTCCAAGGTCACAGGGCTAGGCAAGGGTGGAACCCTGAGTCTGCTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp GGTCTTCTCCCCACCCTGTCTACAGGGAGTATTTTGGAGATTGACTaGACACTGCTGTGCACATCAACTGAGTCTACATCAGGAAACAAA +
Preference number: 6 (lower is better)
Translates to: GLLPTLSTGSILEID*TLLCTSTESTSGNK
Trigger: TTTGTTTCCTGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGGGGAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp TGGAGTGGCAGGGTTTACAGTTCCAACTCTGATCCTGTCCCTCATTaGCAGGGTCCTTCAGCAAATAATTTTTCTCTGTGCATTGCCAAG +
Preference number: 6 (lower is better)
Translates to: WSGRVYSSNSDPVPH*QGPSANNFSLCIAK
Trigger: CTTGGCAATGCACAGAGAAAAATTATTTGCTGAAGGACCCTGCAAATGAGGGACAGGATCAGAGTTGGAACTGTAAACCCTGCCACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS TCA 72 bp ACATGTAGCAATGGTCATCATGGCAGCCTCTGCCTCTaGGCCTTGATACAAAAGGGTTTGTGCTTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: TCSNGHHGSLCL*ALIQKGLCFLS
Trigger: AGACAAGAAGCACAAACCCTTTTGTATCAAGGCTCAGAGGCAGAGGCTGCCATGATGACCATTGCTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS TCA 72 bp TCTGCTGGTGCAACAACTGTCAATGGCATACCTGGCTaGACAGGTTCTTTTGCAGGGGATAACACTTCTACT +
Preference number: 6 (lower is better)
Translates to: SAGATTVNGIPG*TGSFAGDNTST
Trigger: AGTAGAAGTGTTATCCCCTGCAAAAGAACCTGTTCAGCCAGGTATGCCATTGACAGTTGTTGCACCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp CTGAAGAGTACCTGTGGAATGGCCAAGACCAGTGAGTaGCACGTTGATTTCTTGAATACCTTCAGAGGTAGC +
Preference number: 6 (lower is better)
Translates to: LKSTCGMAKTSE*HVDFLNTFRGS
Trigger: GCTACCTCTGAAGGTATTCAAGAAATCAACGTGTCACTCACTGGTCTTGGCCATTCCACAGGTACTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp GGCTTAGCTGCTATCAGTCTTAGTTGCCTTGCAACCTaGAAAATTGAAGGATCCTTGAGACAGCGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: GLAAISLSCLAT*KIEGSLRQRLG
Trigger: ACCTAGCCGCTGTCTCAAGGATCCTTCAATTTTTCAGGTTGCAAGGCAACTAAGACTGATAGCAGCTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp CCACCCTGTCTACAGGGAGTATTTTGGAGATTGACTTaGCACTGCTGTGCACATCAACTGAGTCTACATCAG +
Preference number: 6 (lower is better)
Translates to: PPCLQGVFWRLT*HCCAHQLSLHQ
Trigger: CTGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS TCA 72 bp GTAGAAGCAAACTTAAGCAGCTCTTTTCAGGAATGCTaGCCCCAAAGTCCGCCTTTGAATGTGGCTCTACCA +
Preference number: 6 (lower is better)
Translates to: VEANLSSSFQEC*PQSPPLNVALP
Trigger: TGGTAGAGCCACATTCAAAGGCGGACTTTGGGGTCAGCATTCCTGAAAAGAGCTGCTTAAGTTTGCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 72 bp GGGTATAGCTGCTGTACCCATGAAGATCACATGAAATaGAGTGGCAGGGTTTACAGTTCCAACTCTGATCCT +
Preference number: 6 (lower is better)
Translates to: GYSCCTHEDHMK*SGRVYSSNSDP
Trigger: AGGATCAGAGTTGGAACTGTAAACCCTGCCACTCCATTTCATGTGATCTTCATGGGTACAGCAGCTATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CCA 72 bp GTTTGGTTATACCGCCCGAAAGATAATTTACCTCTGTaGCAAAACCACCCACCTAGCTTTAGTGCAAAGGGG +
Preference number: 6 (lower is better)
Translates to: VWLYRPKDNLPL*QNHPPSFSAKG
Trigger: CCCCTTTGCACTAAAGCTAGGTGGGTGGTTTTGCCACAGAGGTAAATTATCTTTCGGGCGGTATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CAA 72 bp GCTGCAAACCACCTGATACTACAGGTGCAGGTGCACTaGGGAATGGCAATAGTAATATCGACATCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: AANHLILQVQVH*GMAIVISTSLY
Trigger: GTACAAGGATGTCGATATTACTATTGCCATTCCCAAGTGCACCTGCACCTGTAGTATCAGGTGGTTTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 72 bp CCCACCCTGTCTACAGGGAGTATTTTGGAGATTGACTaGACACTGCTGTGCACATCAACTGAGTCTACATCA +
Preference number: 6 (lower is better)
Translates to: PTLSTGSILEID*TLLCTSTESTS
Trigger: TGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGTAGACAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp GCAGCCAAGGCTGCAAACCACCTGATACTACAGGTGCAGGTGCACTaGGGAATGGCAATAGTAATATCGACATCCTTGTACAAGATTTTA +
Preference number: 6 (lower is better)
Translates to: AAKAANHLILQVQVH*GMAIVISTSLYKIL
Trigger: TAAAATCTTGTACAAGGATGTCGATATTACTATTGCCATTCCCAAGTGCACCTGCACCTGTAGTATCAGGTGGTTTGCAGCCTTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS TCA 72 bp CTATTACCAGTAATACCACCATCATTCGGAGGTTTCTaGAGAGTACCTGTGGAATGGCCAAGACCAGTGAGT +
Preference number: 6 (lower is better)
Translates to: LLPVIPPSFGGF*RVPVEWPRPVS
Trigger: ACTCACTGGTCTTGGCCATTCCACAGGTACTCTTCAGAAACCTCCGAATGATGGTGGTATTACTGGTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp CAGTCGCCCACAAAACCAGCACTTAAATACACACTGTaGAGAATCATCAGGCAAGGAATCCACTACCTGGTA +
Preference number: 6 (lower is better)
Translates to: QSPTKPALKYTL*RIIRQGIHYLV
Trigger: TACCAGGTAGTGGATTCCTTGCCTGATGATTCTTCACAGTGTGTATTTAAGTGCTGGTTTTGTGGGCGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 72 bp TTTGCCCTTGGAGGAAAGAACATCCCAATCTCTAGTTaGTTCTATCAAATGCCGTTGGCCATGACTCATCCA +
Preference number: 6 (lower is better)
Translates to: FALGGKNIPISS*FYQMPLAMTHP
Trigger: TGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTTCTTTCCTCCAAGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CCA 72 bp CTTCCTTGCTGTCCATACAAGAGGCCAGTTTTTCTATaGATGGTGCTACAGACAGCACTCTCTTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: LPCCPYKRPVFL*MVLQTALSFLS
Trigger: ACTGAGAAAAGAGAGTGCTGTCTGTAGCACCATCCATAGAAAAACTGGCCTCTTGTATGGACAGCAAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp GCTGCAGTGAGAACAAATGAATTTAATCTCCTCGTGTaGAAGGGTGTGCTTTTTGTACTGCAGCGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: AAVRTNEFNLLV*KGVLFVLQRVL
Trigger: AAGGACCCGCTGCAGTACAAAAAGCACACCCTTCAACACGAGGAGATTAAATTCATTTGTTCTCACTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp TTTTCTTCCAGCGGAAACAGTTTCAGAACAAGCTGCTGTGTACCATaGACAACCTTCACATCTATCAACTGGGCTAAACAGTTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: FSSSGNSFRTSCCVP*TTFTSINWAKQFAG
Trigger: CCCTGCAAACTGTTTAGCCCAGTTGATAGATGTGAAGGTTGTCAATGGTACACAGCAGCTTGTTCTGAAACTGTTTCCGCTGGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp GCGGAAACAGTTTCAGAACAAGCTGCTGTGTACCATTaGCAACCTTCACATCTATCAACTGGGCTAAACAGT +
Preference number: 6 (lower is better)
Translates to: AETVSEQAAVYH*QPSHLSTGLNS
Trigger: ACTGTTTAGCCCAGTTGATAGATGTGAAGGTTGTCAATGGTACACAGCAGCTTGTTCTGAAACTGTTTCCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp GCCAAAGATGACGGCTTCCCACAGGACTCAATTAACTaGGCTATCTTTCTGCGCAACAGTTCAATTGACTTT +
Preference number: 6 (lower is better)
Translates to: AKDDGFPQDSIN*AIFLRNSSIDF
Trigger: AAAGTCAATTGAACTGTTGCGCAGAAAGATAGCTCAGTTAATTGAGTCCTGTGGGAAGCCGTCATCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp ATGATAAGTAGAGTAGTGAATGTTCTATCAATGATCTaGTCAGAGTGCTCTCCCAGAGGCTGGCTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: MISRVVNVLSMI*SECSPRGWLLV
Trigger: GACAAGCAGCCAGCCTCTGGGAGAGCACTCTGATCAGATCATTGATAGAACATTCACTACTCTACTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 72 bp GGGTTTACAGTTCCAACTCTGATCCTGTCCCTCATTTaGAGGGTCCTTCAGCAAATAATTTTTCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: GFTVPTLILSLI*RVLQQIIFLCA
Trigger: TGCACAGAGAAAAATTATTTGCTGAAGGACCCTGCAAATGAGGGACAGGATCAGAGTTGGAACTGTAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp AGATGCCCAGCAAGCTCAGTGTTAGTTGACTGTGACTaGATCGTTTTTGGATGTAGAAGCAAACTTAAGCAG +
Preference number: 6 (lower is better)
Translates to: RCPASSVLVDCD*IVFGCRSKLKQ
Trigger: CTGCTTAAGTTTGCTTCTACATCCAAAAACGATGCAGTCACAGTCAACTAACACTGAGCTTGCTGGGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CAA 72 bp AACATCCCAATCTCTAGTTGCTTCTATCAAATGCCGTaGGCCATGACTCATCCACTCTTCCTGGTCTTCATA +
Preference number: 6 (lower is better)
Translates to: NIPISSCFYQMP*AMTHPLFLVFI
Trigger: TATGAAGACCAGGAAGAGTGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp AGGGTTTACAGTTCCAACTCTGATCCTGTCCCTCATTaGCAGGGTCCTTCAGCAAATAATTTTTCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: RVYSSNSDPVPH*QGPSANNFSLC
Trigger: GCACAGAGAAAAATTATTTGCTGAAGGACCCTGCAAATGAGGGACAGGATCAGAGTTGGAACTGTAAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CAA 90 bp CGAAATGTAGCTGCAGTGAGAACAAATGAATTTAATCTCCTCGTGTaGAAGGGTGTGCTTTTTGTACTGCAGCGGGTCCTTTGTAGAGAA +
Preference number: 6 (lower is better)
Translates to: RNVAAVRTNEFNLLV*KGVLFVLQRVLCRE
Trigger: TTCTCTACAAAGGACCCGCTGCAGTACAAAAAGCACACCCTTCAACACGAGGAGATTAAATTCATTTGTTCTCACTGCAGCTACATTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp ATAAAATCCTTAGGAGATATCCTTCTATACAGTTTGTaGTGGGTAGGGGCGCAGCTACTTCTTGGGTGCATA +
Preference number: 6 (lower is better)
Translates to: IKSLGDILLYSL*WVGAQLLLGCI
Trigger: TATGCACCCAAGAAGTAGCTGCGCCCCTACCCATCACAAACTGTATAGAAGGATATCTCCTAAGGATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS TCA 72 bp TTCTCAAAGCCAGCCTTCAGTTATCTGCTTCTTCCCTaGTTAACAGGTCTGGAGAAGCTATATGGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: FSKPAFSYLLLP*LTGLEKLYGFL
Trigger: CAAAAAGCCATATAGCTTCTCCAGACCTGTTAATCAGGGAAGAAGCAGATAACTGAAGGCTGGCTTTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp AGCAGTCTCCCTTGCTTATTTAATTCACTGCTTCCTTaGTGTCCATACAAGAGGCCAGTTTTTCTATGGATG +
Preference number: 6 (lower is better)
Translates to: SSLPCLFNSLLP*CPYKRPVFLWM
Trigger: CATCCATAGAAAAACTGGCCTCTTGTATGGACAGCAAGGAAGCAGTGAATTAAATAAGCAAGGGAGACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS GCA 72 bp ACAGGGAGTATTTTGGAGATTGACTTGACACTGCTGTaGACATCAACTGAGTCTACATCAGGAAACAAAGGA +
Preference number: 6 (lower is better)
Translates to: TGSILEIDLTLL*TSTESTSGNKG
Trigger: TCCTTTGTTTCCTGATGTAGACTCAGTTGATGTGCACAGCAGTGTCAAGTCAATCTCCAAAATACTCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS GCA 72 bp AAAAGGAAAGGTGGGTGGCCAATTATATCGCATACATaGTACATGGACCACCACATACATTTCTGTTCAGGA +
Preference number: 6 (lower is better)
Translates to: KRKGGWPIISHT*YMDHHIHFCSG
Trigger: TCCTGAACAGAAATGTATGTGGTGGTCCATGTAGCATGTATGCGATATAATTGGCCACCCACCTTTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS TCA 72 bp AGAGAGAAACCTGACAGTTGGTCTGACCACTTATTTTaGAATGTAGTCCGTGGATTGGAAGCTTTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: REKPDSWSDHLF*NVVRGLEAFRS
Trigger: GCTTCTAAAAGCTTCCAATCCACGGACTACATTTCAAAATAAGTGGTCAGACCAACTGTCAGGTTTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS TCA 72 bp GTCATAATCTTTTTGCCAAACTACCTTGCACTGAGATaGCTGAATTGCAAATTGACTGCCATCCTGATGACG +
Preference number: 6 (lower is better)
Translates to: VIIFLPNYLALR*LNCKLTAILMT
Trigger: CGTCATCAGGATGGCAGTCAATTTGCAATTCAGTCATCTCAGTGCAAGGTAGTTTGGCAAAAAGATTATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp CACCATAGTCACAATACTCACACTGATAAGGAAATATaGCTGTGTGTTTCACCAAATGCCTCTGAAACTCTC +
Preference number: 6 (lower is better)
Translates to: HHSHNTHTDKEI*LCVSPNASETL
Trigger: GAGAGTTTCAGAGGCATTTGGTGAAACACACAGGCATATTTCCTTATCAGTGTGAGTATTGTGACTATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp CAACTGTCAATGGCATACCTGGCTGAACAGGTTCTTTaGCAGGGGATAACACTTCTACTTCAACATTTTTGT +
Preference number: 6 (lower is better)
Translates to: QLSMAYLAEQVL*QGITLLLQHFC
Trigger: ACAAAAATGTTGAAGTAGAAGTGTTATCCCCTGCAAAAGAACCTGTTCAGCCAGGTATGCCATTGACAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp GTGCACTTGGGAATGGCAATAGTAATATCGACATCCTaGTACAAGATTTTATATTCTTGTGGGTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: VHLGMAIVISTS*YKILYSCGCLE
Trigger: CTCCAGGCACCCACAAGAATATAAAATCTTGTACAAGGATGTCGATATTACTATTGCCATTCCCAAGTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 90 bp GAGCTCAGAGAAAATACTGATGAGATGACTGGGCCATCATTAGTGTaGTTAGTCCTTTCAGAATTCTTTAATTCCAAAGGCTTATCCCCA +
Preference number: 6 (lower is better)
Translates to: ELRENTDEMTGPSLV*LVLSEFFNSKGLSP
Trigger: TGGGGATAAGCCTTTGGAATTAAAGAATTCTGAAAGGACTAACAACACTAATGATGGCCCAGTCATCTCATCAGTATTTTCTCTGAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp ACTTTGAGGACATTGCCTTTGTATTTATTTATTACCTTCATCACATaGGTCACTTCTGGCGAGTCCACATCAGGGTGGTTTAACACAATG +
Preference number: 6 (lower is better)
Translates to: TLRTLPLYLFITFIT*VTSGESTSGWFNTM
Trigger: CATTGTGTTAAACCACCCTGATGTGGACTCGCCAGAAGTGACCAATGTGATGAAGGTAATAAATAAATACAAAGGCAATGTCCTCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 90 bp TTAACAGGTCTGGAGAAGCTATATGGCTTTTTGAAGATCACAGAGTaGGTGAACAGCTGCAACTGGGTCCAATCTTACATTCTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: LTGLEKLYGFLKITE*VNSCNWVQSYILCF
Trigger: AAAACAAAGAATGTAAGATTGGACCCAGTTGCAGCTGTTCACCAACTCTGTGATCTTCAAAAAGCCATATAGCTTCTCCAGACCTGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS TCA 72 bp TTCCTCACCCACTTCTCTCAAAGTTCAGCCAAATTGTaGAATATCCCTGTAGCAAATGAATGTGTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: FLTHFSQSSAKL*NIPVANECVSV
Trigger: CACAGAAACACATTCATTTGCTACAGGGATATTTCACAATTTGGCTGAACTTTGAGAGAAGTGGGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS GCA 72 bp GAATTATGTCCGCCGTTCAAGTGTGTAGTGTATAGCTaGTGTCCAATATCCTTCATCTTATCTGCATTTCTA +
Preference number: 6 (lower is better)
Translates to: ELCPPFKCVVYS*CPISFILSAFL
Trigger: TAGAAATGCAGATAAGATGAAGGATATTGGACAGCAGCTATACACTACACACTTGAACGGCGGACATAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS GCA 72 bp TATGGCTTTTTGAAGATCACAGAGTTGGTGAACAGCTaGAACTGGGTCCAATCTTACATTCTTTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: YGFLKITELVNS*NWVQSYILCFL
Trigger: CAGAAAACAAAGAATGTAAGATTGGACCCAGTTGCAGCTGTTCACCAACTCTGTGATCTTCAAAAAGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CAA 72 bp GAAAAGGGTGTATGCAAGTGGGAGGTAACTTTATGCTaGGCAAAGAGTAGATGTTTCGTTAAGAAATCAGTC +
Preference number: 6 (lower is better)
Translates to: EKGVCKWEVTLC*AKSRCFVKKSV
Trigger: GACTGATTTCTTAACGAAACATCTACTCTTTGCCAAGCATAAAGTTACCTCCCACTTGCATACACCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS TCA 72 bp AATTATCTTTCTTTATATACTGCCGCAGTAGGTGCATaGTCCCAAAATATGACTGCTTTCAGCTCTCTGACA +
Preference number: 6 (lower is better)
Translates to: NYLSLYTAAVGA*SQNMTAFSSLT
Trigger: TGTCAGAGAGCTGAAAGCAGTCATATTTTGGGATCATGCACCTACTGCGGCAGTATATAAAGAAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326756.4
ENST00000507515.1
CDS CAA 90 bp TGTCATAATCTTTTTGCCAAACTACCTTGCACTGAGATGACTGAATaGCAAATTGACTGCCATCCTGATGACGAAAAATACTTCCAAATG +
Preference number: 6 (lower is better)
Translates to: CHNLFAKLPCTEMTE*QIDCHPDDEKYFQM
Trigger: CATTTGGAAGTATTTTTCGTCATCAGGATGGCAGTCAATTTGCAATTCAGTCATCTCAGTGCAAGGTAGTTTGGCAAAAAGATTATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS CAA 90 bp ACTACATCTTTTTGGTATTCCTTTGGTTCAGGTAACAACATGATATaGTGCATTTTGTCTTTATTTGCATGGAGAGAGAAACCTGACAGT +
Preference number: 6 (lower is better)
Translates to: TTSFWYSFGSGNNMI*CILSLFAWREKPDS
Trigger: ACTGTCAGGTTTCTCTCTCCATGCAAATAAAGACAAAATGCACAATATCATGTTGTTACCTGAACCAAAGGAATACCAAAAAGATGTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326756.4
CDS CAA 72 bp CTATATTCCTTCTGTCTCTTTCACCATAGCAAAGGCTaGTCTAGCTTTCCCAGTAACCAAATTTTTAAAACA +
Preference number: 6 (lower is better)
Translates to: LYSFCLFHHSKG*SSFPSNQIFKT
Trigger: TGTTTTAAAAATTTGGTTACTGGGAAAGCTAGACAAGCCTTTGCTATGGTGAAAGAGACAGAAGGAATATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000500268.6
ENST00000503068.1
ENST00000515072.1
CDS TCA 72 bp ATAAAATGTGAATATTTCTCATTTATACAGCTGATGTaGGGACAAATGAGAAAAGGGTGTATGCAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: IKCEYFSFIQLM*GQMRKGCMQVG
Trigger: TCCCACTTGCATACACCCTTTTCTCATTTGTCCTCACATCAGCTGTATAAATGAGAAATATTCACATTTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500268.6
ENST00000503068.1
CDS CAA 72 bp CACCTAGTCCTCTCTGATAAAACAACTTTGAGGACATaGCCTTTGTATTTATTTATTACCTTCATCACATTG +
Preference number: 6 (lower is better)
Translates to: HLVLSDKTTLRT*PLYLFITFITL
Trigger: CAATGTGATGAAGGTAATAAATAAATACAAAGGCAATGTCCTCAAAGTTGTTTTATCAGAGAGGACTAGGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326756.4