RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF516 (Homo sapiens)

Ensembl gene IDs: ENSG00000101493

Ensembl transcript IDs: ENST00000443185.7, ENST00000532857.1, ENST00000542818.1, ENST00000617840.1

Found 568 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTaGAAGCCAGGAAGGATCCAGCACGCGGCCGGCAGGGCCCCAGCG +
Preference number: 1 (lower is better)
Translates to: PCAAPQADCPPRLLS*KPGRIQHAAGRAPA
Trigger: CGCTGGGGCCCTGCCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTaGTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACC +
Preference number: 1 (lower is better)
Translates to: PRLFFHGAARSQVGG*WDIVRVLLMAVTGT
Trigger: GGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CCA 90 bp CGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGG +
Preference number: 1 (lower is better)
Translates to: RLFFHGAARSQVGGC*DIVRVLLMAVTGTW
Trigger: CCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CCA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACATCGTGAG +
Preference number: 1 (lower is better)
Translates to: RDVRCLLRSSPAVLP*SGQVTGGRLLGHRE
Trigger: CTCACGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR GCA 90 bp TGGCCCTTGGTCACTCCCACAGGCACGTTACCGGGCTCCGGCGTGTaGTCCCACCAACCACGGCAAACAAAGGCGTCCTCCTCACTTGAA +
Preference number: 1 (lower is better)
Translates to: WPLVTPTGTLPGSGV*SHQPRQTKASSSLE
Trigger: TTCAAGTGAGGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp AGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCG +
Preference number: 1 (lower is better)
Translates to: RHLPSVSTPAQRLGM*GVCSGVPRLFFHGA
Trigger: CGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CCA 90 bp GTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTaGGGGCCTGTCATACTGGGCGCTCCTTTCTCTGACGAAGTAACT +
Preference number: 1 (lower is better)
Translates to: VLTPSATCAQWPDQG*GPVILGAPFSDEVT
Trigger: AGTTACTTCGTCAGAGAAAGGAGCGCCCAGTATGACAGGCCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp AATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTaGACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCT +
Preference number: 1 (lower is better)
Translates to: NGTGTRPQGGVRWSQ*TMRVSSSYPSAKPA
Trigger: AGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 90 bp CGTGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATaGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTG +
Preference number: 1 (lower is better)
Translates to: RVSFARFAQFEWWEE*NRHTAPGRSAMEPV
Trigger: CACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR TCA 90 bp GAAGCTTGCCCTTTCTGCACTCAACCCCTGCAGCCTGAAGGAGTGTaGGACGATGAAACCCACATGTGCCGGAGCCCCTGCAGAGGTGTT +
Preference number: 1 (lower is better)
Translates to: EACPFCTQPLQPEGV*DDETHMCRSPCRGV
Trigger: AACACCTCTGCAGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGGGTTGAGTGCAGAAAGGGCAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 90 bp CCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATaGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAAC +
Preference number: 1 (lower is better)
Translates to: PPRLVLTSSPQSLLT*EAPVTVLSLATLSN
Trigger: GTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 90 bp TCCCACAGACGTGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTaGGAAGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATG +
Preference number: 1 (lower is better)
Translates to: SHRRVSFARFAQFEW*EEWNRHTAPGRSAM
Trigger: CATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACACGTCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 90 bp CATTCCCACAGACGTGTCTCCTTTGCCAGATTCGCTCAGTTCGAATaGTGGGAAGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCG +
Preference number: 1 (lower is better)
Translates to: HSHRRVSFARFAQFE*WEEWNRHTAPGRSA
Trigger: CGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACACGTCTGTGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 90 bp CACCCTCTCTGTCCAAAGAACAGAGGCCGACCAGAGTTGCCAGCCTaGAGAGGCACCATGGAGATGAAGCTTGCCCTTTCTGCACTCAAC +
Preference number: 1 (lower is better)
Translates to: HPLCPKNRGRPELPA*RGTMEMKLALSALN
Trigger: GTTGAGTGCAGAAAGGGCAAGCTTCATCTCCATGGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTCTGTTCTTTGGACAGAGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 90 bp GAATTAGCAAAGCTGATGAAGAATGAACATTTTCCCTTGGGCGGGTaGCCCTTGGTCACTCCCACAGGCACGTTACCGGGCTCCGGCGTG +
Preference number: 1 (lower is better)
Translates to: ELAKLMKNEHFPLGG*PLVTPTGTLPGSGV
Trigger: CACGCCGGAGCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCATTCTTCATCAGCTTTGCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp AGAGGCACCATGGAGATGAAGCTTGCCCTTTCTGCACTCAACCCCTaGAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGA +
Preference number: 1 (lower is better)
Translates to: RGTMEMKLALSALNP*SLKECETMKPTCAG
Trigger: TCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGGGTTGAGTGCAGAAAGGGCAAGCTTCATCTCCATGGTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp GAGTCAGAATTCCGTCCGCGTCCATCCCTGTGCGTCCTGTATGGGTaGCAGTGCAAGGGTAAGAACAGTGGGTGTATTCAGTGGGGAAAT +
Preference number: 1 (lower is better)
Translates to: ESEFRPRPSLCVLYG*QCKGKNSGCIQWGN
Trigger: ATTTCCCCACTGAATACACCCACTGTTCTTACCCTTGCACTGTCACCCATACAGGACGCACAGGGATGGACGCGGACGGAATTCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp CCAGTGAACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTaGTTCCCACAGCACCTGAACGTCACCTCCTTCCTCTCTCTTATT +
Preference number: 1 (lower is better)
Translates to: PVNNEGLIIIPLRQA*FPQHLNVTSFLSLI
Trigger: AATAAGAGAGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR GCA 90 bp GGGCCTGTCATACTGGGCGCTCCTTTCTCTGACGAAGTAACTGTATaGAACTCCCAATTGCTACTTCCTGAAGCACCTGCTTTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: GPVILGAPFSDEVTV*NSQLLLPEAPAFQG
Trigger: TCCCTGAAAAGCAGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATACAGTTACTTCGTCAGAGAAAGGAGCGCCCAGTATGACAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp GAAGGAATGTTGGTAGACAGTCTCCAGCCACGAAAGCCCAGGAGGTaGCCTCTTCCACACAACAGACTAAGCACTACACCCACTTTCTTT +
Preference number: 1 (lower is better)
Translates to: EGMLVDSLQPRKPRR*PLPHNRLSTTPTFF
Trigger: AAAGAAAGTGGGTGTAGTGCTTAGTCTGTTGTGTGGAAGAGGGCACCTCCTGGGCTTTCGTGGCTGGAGACTGTCTACCAACATTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 90 bp GACCAAATCAACAAATTAACAAACCAACACAATACTGACGATGGGTaGAAGGAAGGGACCACACATCCAGGCCTGCCCACAGCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: DQINKLTNQHNTDDG*KEGTTHPGLPTAGL
Trigger: GAGGCCAGCTGTGGGCAGGCCTGGATGTGTGGTCCCTTCCTTCCACCCATCGTCAGTATTGTGTTGGTTTGTTAATTTGTTGATTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp AGCGGGAAGCAGCGAGCGGAAAGCAGGGGAGAGACACCGAGAAGCTaGAGTGTAGACAACCAAACCCTTTATTGTCTAAGTTACATTAGA +
Preference number: 1 (lower is better)
Translates to: SGKQRAESRGETPRS*SVDNQTLYCLSYIR
Trigger: TCTAATGTAACTTAGACAATAAAGGGTTTGGTTGTCTACACTGCAGCTTCTCGGTGTCTCTCCCCTGCTTTCCGCTCGCTGCTTCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp GTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACCTaGACGTCACCTCCTTCCTCTCTCTTATTTACTATTTTAAATACC +
Preference number: 1 (lower is better)
Translates to: VSSSYPSAKPASHST*TSPPSSLLFTILNT
Trigger: GGTATTTAAAATAGTAAATAAGAGAGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR TCA 90 bp AAACCATTGCAAACCACAGTGCCAGCCCTTGTGTCCCCACATTTTTaGCACAATAATTTCCTCCAGGTGTGGCTGAGTCAGAATTCCGTC +
Preference number: 1 (lower is better)
Translates to: KPLQTTVPALVSPHF*HNNFLQVWLSQNSV
Trigger: GACGGAATTCTGACTCAGCCACACCTGGAGGAAATTATTGTGTCAAAAATGTGGGGACACAAGGGCTGGCACTGTGGTTTGCAATGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp ACACTTCCAGCTCCAAAGGCCAACTGCACTTTTCCATGCCGCTTCTaGAACAGTAAAAATGTAGACTACACTTTCGTGTCACTTTGGGTA +
Preference number: 1 (lower is better)
Translates to: TLPAPKANCTFPCRF*NSKNVDYTFVSLWV
Trigger: TACCCAAAGTGACACGAAAGTGTAGTCTACATTTTTACTGTTTCAGAAGCGGCATGGAAAAGTGCAGTTGGCCTTTGGAGCTGGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 90 bp CACTTAATACTTTTCAGAGCCTCAAAGGCAAAATTCACCTGGCTTTaGAGCCAAATCTGTATGGTGCTGAGAATGAAATCTGTCCGTCTA +
Preference number: 1 (lower is better)
Translates to: HLILFRASKAKFTWL*SQICMVLRMKSVRL
Trigger: TAGACGGACAGATTTCATTCTCAGCACCATACAGATTTGGCTTCAAAGCCAGGTGAATTTTGCCTTTGAGGCTCTGAAAAGTATTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 90 bp ATTCTTCTGCCATTACTAAAACAGGTCCGAATCGGGAGGACTCAGTaGCTAAATAATTTGTTAAGACGTATAGTCTTCCTTTGTAAGCAG +
Preference number: 1 (lower is better)
Translates to: ILLPLLKQVRIGRTQ*LNNLLRRIVFLCKQ
Trigger: CTGCTTACAAAGGAAGACTATACGTCTTAACAAATTATTTAGCCACTGAGTCCTCCCGATTCGGACCTGTTTTAGTAATGGCAGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 90 bp TTTAAATTAGAATCTTTATTGCATCTGATGGTCCTGTCTCATTTTTaGTGTCTCATCAGTAAACCATTGCAAACCACAGTGCCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: FKLESLLHLMVLSHF*CLISKPLQTTVPAL
Trigger: AAGGGCTGGCACTGTGGTTTGCAATGGTTTACTGATGAGACAGCAAAAATGAGACAGGACCATCAGATGCAATAAAGATTCTAATTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 2 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR TCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCACAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: VHPARPRKLTVLHACSPAQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGCGGCCAGGTCACAGGTaGGAGGCTGCTGGGACATCG +
Preference number: 2 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWRPGHR*EAAGTS
Trigger: CGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCG...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR CCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 2 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR CCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 2 (lower is better)
Translates to: HREGTANGRYGDLGCVGNAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR GCA 90 bp GCTCCGGCGTGTGCTCCCACCAACCACGGCAAACAAAGGCGTCCTCCTCACTTGACTGTCCTCCACGCCTaGTCTCCTGCAAGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: APACAPTNHGKQRRPPHLTVLHA*SPASQE
Trigger: TTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAGT...CAAGTGAGGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR CCA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTCAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTG +
Preference number: 2 (lower is better)
Translates to: PCSLKECETMKPTCAGAPQVGGC*DIVRVL
Trigger: CAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTG...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR CCA 90 bp AGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: RRGICLQFPLQRSGSGCEPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...CTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CAA 90 bp GCAAAGCTGATGAAGAATGAACATTTTCCCTTGGGCGGGTGGCCCTaGGTCACTCCCACAGGCACGTTACCGGGCTCCGGCGTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: AKLMKNEHFPLGGWP*VTPTGTLPGSGVCS
Trigger: GGAGCACACGCCGGAGCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCATTCTTCATCAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACATCACAGGTGGGAGGCTaGTGGGACATCGTGAGGGTA +
Preference number: 2 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTSQVGG*WDIVRV
Trigger: TACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGA...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAAGGCCCCAGGGAGGAGTaGGATGGAGCCAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: RMEQAHGPREECDGASEQGPREE*DGASEQ
Trigger: TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCC...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR-3UTR GCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTGCACTCTGTGCACCCTaGGCGGCCCCGCAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPALCAP*AAPQAD
Trigger: GTCAGCTTGCGGGGCCGCGCAGGGTGCACAGAGTGC...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR TCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGTGGGACTATGGACGATaGGCACGTAAATGCGTATAT +
Preference number: 2 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGWDYGR*ARKCVY
Trigger: ATATACGCATTTACGTGCTCATCGTCCATAGTCCCA...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGTGCCCCTACTGTGCCTaGCAGTACTACTGTTTATTA +
Preference number: 2 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGCPYCA*QYYCLL
Trigger: TAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCA...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp CAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGCTTGTGCCCCTACTGTaGCTGCCAGTACTACTGTTT +
Preference number: 2 (lower is better)
Translates to: QSLLTWEAPVTVLSLATLLVPLL*LPVLLF
Trigger: AAACAGTAGTACTGGCAGGCACAGTAGGGGCACAAG...CAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR-3UTR CCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR-3UTR TCA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTGATCCCCACCCTTTATaGACAAAGTCACTCATCCTG +
Preference number: 2 (lower is better)
Translates to: PCSLKECETMKPTCAGAPDPHPL*TKSLIL
Trigger: CAGGATGAGTGACTTTGTTCATAAAGGGTGGGGATC...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACAAGACAGATGCCTTGTaGCCCTACTGTGCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHKTDAL*PYCACQ
Trigger: CTGGCAGGCACAGTAGGGGCACAAGGCATCTGTCTT...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR-3UTR GCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACCCCTCCGCCAAGCCTaGTTCCCACAGCACCTGAAC +
Preference number: 2 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAPLRQA*FPQHLN
Trigger: GTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGG...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CAA 90 bp TGTAACCTACACCCTCTCTGTCCAAAGAACAGAGGCCGACCAGAGTaGCCAGCCTGGAGAGGCACCATGGAGATGAAGCTTGCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: CNLHPLCPKNRGRPE*PAWRGTMEMKLALS
Trigger: AGAAAGGGCAAGCTTCATCTCCATGGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTCTGTTCTTTGGACAGAGAGGGTGTAGGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp GTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACTCACAGGTGGGAGGCTaGTGGGACATCGTGAGGGTA +
Preference number: 2 (lower is better)
Translates to: VSFARFAQFEWWEEWNRHSQVGG*WDIVRV
Trigger: TACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGA...GTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CAA 90 bp CTCAAAGCAGAATTAGCAAAGCTGATGAAGAATGAACATTTTCCCTaGGGCGGGTGGCCCTTGGTCACTCCCACAGGCACGTTACCGGGC +
Preference number: 2 (lower is better)
Translates to: LKAELAKLMKNEHFP*GGWPLVTPTGTLPG
Trigger: GCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCATTCTTCATCAGCTTTGCTAATTCTGCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR TCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: ISERLTRRGICLQFPLQRQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR TCA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR-3UTR CCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: ISERLTRRGICLQFPLQRPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR-3UTR GCA 90 bp GCTCCGGCGTGTGCTCCCACCAACCACGGCAAACAAAGGCGTCCTCCTCACTTGACTGTCTACAAAAACTaGACTAGTCCATTACCGTAT +
Preference number: 2 (lower is better)
Translates to: APACAPTNHGKQRRPPHLTVYKN*TSPLPY
Trigger: ATACGGTAATGGACTAGTGCAGTTTTTGTAGACAGT...CAAGTGAGGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR TCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACCACCACGTCTTGTTCTaGCATCATCCCCACAGTCCC +
Preference number: 2 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNHHVLF*HHPHSP
Trigger: GGGACTGTGGGGATGATGTCAGAACAAGACGTGGTG...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CAA 90 bp CTGGGCGCTCCTTTCTCTGACGAAGTAACTGTATGCAACTCCCAATaGCTACTTCCTGAAGCACCTGCTTTTCAGGGAACCAGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: LGAPFSDEVTVCNSQ*LLPEAPAFQGTSVF
Trigger: AAAGACACTGGTTCCCTGAAAAGCAGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATACAGTTACTTCGTCAGAGAAAGGAGCGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR TCA 90 bp GTCTCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTTGTTTGCTTCCCACAGCACCTaGACGTCACCTCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: VSATLPKITLQNSQLQLFASHST*TSPPSS
Trigger: AGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGC...AAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR GCA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCAACAAGGAGAGGCATCTaGCTTCAGTTTCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: SSFISERLTRRGICLQFPTRRGI*LQFPLQ
Trigger: CTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGT...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CAA 90 bp ACACTTAATACTTTTCAGAGCCTCAAAGGCAAAATTCACCTGGCTTaGAAGCCAAATCTGTATGGTGCTGAGAATGAAATCTGTCCGTCT +
Preference number: 2 (lower is better)
Translates to: TLNTFQSLKGKIHLA*KPNLYGAENEICPS
Trigger: AGACGGACAGATTTCATTCTCAGCACCATACAGATTTGGCTTCAAAGCCAGGTGAATTTTGCCTTTGAGGCTCTGAAAAGTATTAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR TCA 90 bp AGTATTAATACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCGTCTCAAACTTGTCTTaGATAAGACAGATGCCTTGT +
Preference number: 2 (lower is better)
Translates to: SINTRSTSNPPRLVLTSSVSNLS*IRQMPC
Trigger: ACAAGGCATCTGTCTTATTCAAGACAAGTTTGAGAC...GGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTATTAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CAA 90 bp TCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTaGTTTAACTGTATCTGCATGGACATTCCTAATTACACCAACAGG +
Preference number: 2 (lower is better)
Translates to: SATLPKITLQNSQLQ*FNCICMDIPNYTNR
Trigger: CCTGTTGGTGTAATTAGGAATGTCCATGCAGATACAGTTAAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp GCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTaGAAGCCAGGAAGGATCCAGCACGCGGCCGGCAGG +
Preference number: 3 (lower is better)
Translates to: APQADCPPRLLS*KPGRIQHAAGR
Trigger: CCTGCCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp CCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTaGTCTCCTGCAAGCCAGGAAGGATCCAGCACGCGG +
Preference number: 3 (lower is better)
Translates to: PARPRKLTVLHA*SPASQEGSSTR
Trigger: CCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp GTCACTCCCACAGGCACGTTACCGGGCTCCGGCGTGTaGTCCCACCAACCACGGCAAACAAAGGCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: VTPTGTLPGSGV*SHQPRQTKASS
Trigger: GGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGCCCGGTAACGTGCCTGTGGGAGTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 72 bp CCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTaGGGGCCTGTCATACTGGGCGCTCCTTTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: PSATCAQWPDQG*GPVILGAPFSD
Trigger: GTCAGAGAAAGGAGCGCCCAGTATGACAGGCCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 72 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: RCLLRSSPAVLP*SGQVTGGRLLG
Trigger: TCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CCA 72 bp AGAGGTGTTCTCACACCCTCAGCGACCTGTGCACAGTaGCCGGATCAGGGGTGGGGGCCTGTCATACTGGGC +
Preference number: 3 (lower is better)
Translates to: RGVLTPSATCAQ*PDQGWGPVILG
Trigger: GCCCAGTATGACAGGCCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp GGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTaGACAATGAGGGTCTCATCATCATACCCCTCCGCC +
Preference number: 3 (lower is better)
Translates to: GTRPQGGVRWSQ*TMRVSSSYPSA
Trigger: GGCGGAGGGGTATGATGATGAGACCCTCATTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR GCA 72 bp ACGATGGGTGGAAGGAAGGGACCACACATCCAGGCCTaGCCACAGCTGGCCTCAAGGGATGGCGTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: TMGGRKGPHIQA*PQLASRDGVLG
Trigger: CCCAAGAACGCCATCCCTTGAGGCCAGCTGTGGGCAGGCCTGGATGTGTGGTCCCTTCCTTCCACCCATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp CCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: PSVSTPAQRLGM*GVCSGVPRLFF
Trigger: GAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR CCA 72 bp TTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTGCTAATGGCCGTTACG +
Preference number: 3 (lower is better)
Translates to: FHGAARSQVGGC*DIVRVLLMAVT
Trigger: CGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR TCA 72 bp CCTTTCTGCACTCAACCCCTGCAGCCTGAAGGAGTGTaGGACGATGAAACCCACATGTGCCGGAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: PFCTQPLQPEGV*DDETHMCRSPC
Trigger: GCAGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGGGTTGAGTGCAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTaGGTCGGAAACACGCCTTTAGGTTCCCTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: EGTANGRYGDLG*VGNTPLGSLSQ
Trigger: CTGAGAAAGGGAACCTAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542818.1
ENST00000617840.1
3UTR GCA 72 bp AATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTaGTTCCCACAGCACCTGAACGTCACCTCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: NEGLIIIPLRQA*FPQHLNVTSFL
Trigger: GAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 72 bp CTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATaGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACT +
Preference number: 3 (lower is better)
Translates to: LVLTSSPQSLLT*EAPVTVLSLAT
Trigger: AGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 72 bp TTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATaGAACAGGCACACGGCCCCAGGGAGGAGTGCGATG +
Preference number: 3 (lower is better)
Translates to: FARFAQFEWWEE*NRHTAPGRSAM
Trigger: CATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 72 bp AGACGTGTCTCCTTTGCCAGATTCGCTCAGTTCGAATaGTGGGAAGAATGGAACAGGCACACGGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: RRVSFARFAQFE*WEEWNRHTAPG
Trigger: CCCTGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CCA 72 bp AAGCTGATGAAGAATGAACATTTTCCCTTGGGCGGGTaGCCCTTGGTCACTCCCACAGGCACGTTACCGGGC +
Preference number: 3 (lower is better)
Translates to: KLMKNEHFPLGG*PLVTPTGTLPG
Trigger: GCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCATTCTTCATCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp TTCCGTCCGCGTCCATCCCTGTGCGTCCTGTATGGGTaGCAGTGCAAGGGTAAGAACAGTGGGTGTATTCAG +
Preference number: 3 (lower is better)
Translates to: FRPRPSLCVLYG*QCKGKNSGCIQ
Trigger: CTGAATACACCCACTGTTCTTACCCTTGCACTGTCACCCATACAGGACGCACAGGGATGGACGCGGACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp TTGGTAGACAGTCTCCAGCCACGAAAGCCCAGGAGGTaGCCTCTTCCACACAACAGACTAAGCACTACACCC +
Preference number: 3 (lower is better)
Translates to: LVDSLQPRKPRR*PLPHNRLSTTP
Trigger: GGGTGTAGTGCTTAGTCTGTTGTGTGGAAGAGGGCACCTCCTGGGCTTTCGTGGCTGGAGACTGTCTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 72 bp TGTCCAAAGAACAGAGGCCGACCAGAGTTGCCAGCCTaGAGAGGCACCATGGAGATGAAGCTTGCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: CPKNRGRPELPA*RGTMEMKLALS
Trigger: AGAAAGGGCAAGCTTCATCTCCATGGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTCTGTTCTTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp GGGGTGGGGGCCTGTCATACTGGGCGCTCCTTTCTCTaGCGAAGTAACTGTATGCAACTCCCAATTGCTACT +
Preference number: 3 (lower is better)
Translates to: GVGACHTGRSFL*RSNCMQLPIAT
Trigger: AGTAGCAATTGGGAGTTGCATACAGTTACTTCGTCAGAGAAAGGAGCGCCCAGTATGACAGGCCCCCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp TCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACCTaGACGTCACCTCCTTCCTCTCTCTTATTTACTATT +
Preference number: 3 (lower is better)
Translates to: SYPSAKPASHST*TSPPSSLLFTI
Trigger: AATAGTAAATAAGAGAGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR GCA 72 bp TCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTaGCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGA +
Preference number: 3 (lower is better)
Translates to: SFISERLTRRGI*LQFPLQRSGSG
Trigger: TCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
3UTR GCA 72 bp TTATGGGCCTTAACCCCCACCACAAAAACTCGCATTTaGATTACTGAGGAAGAGGTATATGAAGCCGTCCCC +
Preference number: 3 (lower is better)
Translates to: LWALTPTTKTRI*ITEEEVYEAVP
Trigger: GGGGACGGCTTCATATACCTCTTCCTCAGTAATGCAAATGCGAGTTTTTGTGGTGGGGGTTAAGGCCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp ATACTGGGCGCTCCTTTCTCTGACGAAGTAACTGTATaGAACTCCCAATTGCTACTTCCTGAAGCACCTGCT +
Preference number: 3 (lower is better)
Translates to: ILGAPFSDEVTV*NSQLLLPEAPA
Trigger: AGCAGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATACAGTTACTTCGTCAGAGAAAGGAGCGCCCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp CGAAGTAACTGTATGCAACTCCCAATTGCTACTTCCTaGAGCACCTGCTTTTCAGGGAACCAGTGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: RSNCMQLPIATS*STCFSGNQCLS
Trigger: AGAAAGACACTGGTTCCCTGAAAAGCAGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATACAGTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp GCTCCAAAGGCCAACTGCACTTTTCCATGCCGCTTCTaGAACAGTAAAAATGTAGACTACACTTTCGTGTCA +
Preference number: 3 (lower is better)
Translates to: APKANCTFPCRF*NSKNVDYTFVS
Trigger: TGACACGAAAGTGTAGTCTACATTTTTACTGTTTCAGAAGCGGCATGGAAAAGTGCAGTTGGCCTTTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR-3UTR CAA 90 bp CAGATCGGGAGAGGTAGTAGAAAGTCTGTAACAGTCAGAAGACAACGTACAGAAGGAATACCATTTCAATaGCGTACACTGCATGGTTTA +
Preference number: 3 (lower is better)
Translates to: QIGRGSRKSVTVRRQRTEGIPFQ*RTLHGL
Trigger: TAAACCATGCAGTGTACGCAATTGAAATGGTATTCC...TTCTGTACGTTGTCTTCTGACTGTTACAGACTTTCTACTACCTCTCCCGATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR TCA 72 bp CTTTTCAGAGCCTCAAAGGCAAAATTCACCTGGCTTTaGAGCCAAATCTGTATGGTGCTGAGAATGAAATCT +
Preference number: 3 (lower is better)
Translates to: LFRASKAKFTWL*SQICMVLRMKS
Trigger: AGATTTCATTCTCAGCACCATACAGATTTGGCTTCAAAGCCAGGTGAATTTTGCCTTTGAGGCTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CCA 72 bp CCATTACTAAAACAGGTCCGAATCGGGAGGACTCAGTaGCTAAATAATTTGTTAAGACGTATAGTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: PLLKQVRIGRTQ*LNNLLRRIVFL
Trigger: AAGGAAGACTATACGTCTTAACAAATTATTTAGCCACTGAGTCCTCCCGATTCGGACCTGTTTTAGTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR GCA 72 bp TTACAGAACAGTCAATTACAGTTGTTTAACTGTATCTaGATGGACATTCCTAATTACACCAACAGGACAGAT +
Preference number: 3 (lower is better)
Translates to: LQNSQLQLFNCI*MDIPNYTNRTD
Trigger: ATCTGTCCTGTTGGTGTAATTAGGAATGTCCATGCAGATACAGTTAAACAACTGTAATTGACTGTTCTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCACGGCCCTGGTGGGGCTaGGGCCTCGCCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPARPWWG*GLASAP
Trigger: TGGAGCTGAGGCGAGGCCCCAGCCCCACCAGGGCCG...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CTGTCCTCCACGCCTGCTCTCCTGCAAGCCAGGAAGGATCCAGCACGCGGCCGGCGGCGCGCGCGGCGATaGACGCGTGAGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LSSTPALLQARKDPARGRRRARR*TRECST
Trigger: GGTGCTGCACTCACGCGTGCATCGCCGCGCGCGCCG...CCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCACTATTGGCCGAGGGCTaGGCGCCAGCCCGGGCGATG +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPALLAEG*APARAM
Trigger: CATCGCCCGGGCTGGCGCGCAGCCCTCGGCCAATAG...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCAGGGCGCGGCCGGTGGTaGCGGCACAGCTTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPAGRGRW*RHSFLS
Trigger: CGACAGAAAGCTGTGCCGCCACCACCGGCCGCGCCC...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCACCGAGGCGCTCTTGGTaGGGCTGGCGCAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPAPRRSW*GWRRRP
Trigger: TGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGG...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCAAGGCCGAGGCGCTCTTaGTGGGGCTGGCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPARPRRS*WGWRRR
Trigger: ACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCT...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGCCGCTGCCGGGCCCCTaGGCGGTGATGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGPLPGP*AVMWSL
Trigger: GAGGGACCACATCACCGCGCAGGGGCCCGGCAGCGG...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGACCCGCCGTCCGGCCTaGGTGCCAGGGCACGAGTCG +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGTRRPA*VPGHES
Trigger: CGACTCGTGCCCTGGCACGCAGGCCGGACGGCGGGT...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACACTTGCCCTGGCCGGTaGTGGCTGCGGCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDTCPGR*WLRPCG
Trigger: ACCGCAGGGCCGCAGCCACCACCGGCCAGGGCAAGT...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CTGTCCTCCACGCCTGCTCTCCTGCAAGCCAGGAAGGATCCAGCACGCGGCCGGTCGGAGGACTTGCCCTaGCCGGTGGTGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSSTPALLQARKDPARGRSEDLP*PVVAAA
Trigger: GGCCGCAGCCACCACCGGCCAGGGCAAGTCCTCCGA...CCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGAGGCCGCGTCGCCCCTaGACCCCGCAGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWRPRRP*TPQHRW
Trigger: CCACCTGTGCTGCGGGGTCCAGGGGCGACGCGGCCT...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCCGGGCCCCTGCGCGGTaGTGTGGTCCCTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGRAPAR*CGPSRC
Trigger: ACATCGAGAGGGACCACATCACCGCGCAGGGGCCCG...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGGCGCGCGTGCGGCTaGCCTCGACTCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLGRACG*PRLCGG
Trigger: TCCACCGCAGAGTCGAGGCCAGCCGCACGCGCGCCC...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CTGTCCTCCACGCCTGCTCTCCTGCAAGCCAGGAAGGATCCAGCACGCGGCCGGTCCGGCTCGTGTCCCTaGATCAGAGTCCCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: LSSTPALLQARKDPARGRSGSCP*IRVPVR
Trigger: CCGCACGGGGACTCTGATTCAGGGACACGAGCCGGA...CCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTGGAGCACTGGACCGCTaGCTTGGCCTCCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPGALDR*LGLPRG
Trigger: GCCCCGGGGGAGGCCAAGGCAGCGGTCCAGTGCTCC...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGCCGGGCTCCGGCGTGTaGTCCCACCAACCACGGCAA +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGPGSGV*SHQPRQ
Trigger: TTGCCGTGGTTGGTGGGAGCACACGCCGGAGCCCGG...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCAGGTGCACCTTCTACATaGGGGGCGCAGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPAGAPST*GAQQLA
Trigger: TGCCAGCTGCTGCGCCCCCCATGTAGAAGGTGCACC...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCACTGAGGTGGCCGGGCTaGTGGAAGCTCTTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPALRWPG*WKLFPH
Trigger: GTGCGGAAAGAGCTTCCACCAGCCCGGCCACCTCAG...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGAGTGTGCCCGCATGTaGGCCCTGAGGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLECARM*ALRWPG
Trigger: GCCCGGCCACCTCAGGGCCCACATGCGGGCACACTC...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 4 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGCCAACCCAGGGCCGCTaGCACCCCATCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWPTQGR*HPIPGR
Trigger: TCTACCAGGGATGGGGTGTCAGCGGCCCTGGGTTGG...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCCGCGGCCCCGCAAGCTaGCTGTCCTCCACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCRGPAS*LSSTPA
Trigger: AGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCG...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGCGGCTGTCCCCCTGGTaGAGGTTCAGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASRLSPW*RFRGAL
Trigger: GAGGGCGCCCCTGAACCTGCACCAGGGGGACAGCCG...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGTGTGGCCGCGCCATGTaGCTCCTGGCCGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGCGRAM*LLAVTR
Trigger: CCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACA...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGGCTTGTGCGCCTGGTaGACGTGCAGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPGLCAW*TCSSRS
Trigger: GGACCTGGAGCTGCACGTGCACCAGGCGCACAAGCC...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGACCCCTGCGCGGCTGGTaGATCCTGCTCACGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGPLRGW*ILLTLA
Trigger: CGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGG...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAATTCCGCGGGGGCCCCTaGGCGGCTGGTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQFRGGP*AAGASC
Trigger: GCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAA...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGTTGGAGCTAGCCTCCTaGCTGGGCTTGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPLELAS*LGLARG
Trigger: GCCCCTGGCCAAGCCCAGGCAGGAGGCTAGCTCCAA...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCACTATTGGCCGAGGGCTaGGCGCCAGCCCGGGCGATG +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPLLAEG*APARAM
Trigger: CATCGCCCGGGCTGGCGCGCAGCCCTCGGCCAATAG...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCAGATGAAACCCACATGTaGCGGAGCCCCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPADETHM*RSPCRG
Trigger: ACCTCTGCAGGGGCTCCGGCACATGTGGGTTTCATC...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGCCTCTCTCAGATTCTTaGCAGGGAGGCGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWPLSDS*QGGGGP
Trigger: AGGCCCGCCGCCTCCCTGCCAAGAATCTGAGAGAGG...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACCTGGCAGCCAGCACCTaGGCTTTCCTGGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDLAAST*AFLGMW
Trigger: CCACATTCCCAGGAAAGCCCAGGTGCTGGCTGCCAG...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTCAGATGTGGCAGCCGTaGTCGAAGGAGCCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAQMWQP*SKEPRC
Trigger: GCACCGGGGCTCCTTCGACCACGGCTGCCACATCTG...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTCTTGCTGCCCGTCTTaGGGCCGTGCGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGSCCPS*GRAPSC
Trigger: ACATGAAGGCGCACGGCCCCAAGACGGGCAGCAAGA...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CTGTCCTCCACGCCTGCTCTCCTGCAAGCCAGGAAGGATCCAGCACGCGGCCGGGCCTCGACTCTGCGGTaGATGGCATTGTGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LSSTPALLQARKDPARGRASTLR*MALWAF
Trigger: GAACGCCCACAATGCCATCCACCGCAGAGTCGAGGC...CCGGCCGCGTGCTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGCCACCTTACCCCGCGTaGCCAGCTGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASPPYPA*PAARPG
Trigger: ACCAGGCCTGGCAGCTGGCCACGCGGGGTAAGGTGG...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGCCACAGGCTTGCTATTaGCCGAGGGCTGCGCGCCAG +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPPQACY*PRAARQ
Trigger: CTGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGG...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGCGGGGAGGCAAAGAGTaGGGACAGAAGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWRGGKE*GQKAPE
Trigger: CTCTGGCGCCTTCTGTCCCCACTCTTTGCCTCCCCG...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCACCCTGCGCGGCCCCGCAAGCTGACTGTCCTCCACGCCTGCTCTCCTGCAAAGTCACTCATCCTGTaGAGGTCACCAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VHPARPRKLTVLHACSPAKSLIL*RSPGPG
Trigger: CCCTGGGCCTGGTGACCTCCACAGGATGAGTGACTT...TGCAGGAGAGCAGGCGTGGAGGACAGTCAGCTTGCGGGGCCGCGCAGGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGCGACCTGTGCACAGTaGCCGGATCAGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLATCAQ*PDQGWG
Trigger: CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGC...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCCAACCCAGGGCCGCTaGCACCCCATCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RDVRCLLRSSPAVLPWSGPTQGR*HPIPGR
Trigger: TCTACCAGGGATGGGGTGTCAGCGGCCCTGGGTTGG...GCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGCTGCCCCCTTCTTGCTaGTCCGCAGCAGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLLPPSC*SAAGLC
Trigger: GCAGAGTCCTGCTGCGGAGCAGCAAGAAGGGGGCAG...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCTCCGGCGTGTGCTCCCACCAACCACGGCAAACAAAGGCGTCCTCCTCACTTGGGCTCAGCTCGGGCTTaGCGTTCTCCACGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: APACAPTNHGKQRRPPHLGSARA*RSPRRP
Trigger: AGGCCTGCGTGGAGAACGGCAAGCCCGAGCTGAGCC...CAAGTGAGGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGTGGGCCTGTTCTTGCTaGCCGTCTTGGGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRWACSC*PSWGRA
Trigger: CGCACGGCCCCAAGACGGGCAGCAAGAACAGGCCCA...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGCTGGCCTCGACTCTaGGGTGGATGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLGWPRL*GGWHCG
Trigger: CCCACAATGCCATCCACCGCAGAGTCGAGGCCAGCC...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCAGCACTCGGAGGACTTaGCCTGGCCGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCSTRRT*PGRWWL
Trigger: CAGCCACCACCGGCCAGGGCAAGTCCTCCGAGTGCT...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGTCCAGGCGCTTCTCATaGCCCTCGGCCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMESRRFS*PSATGS
Trigger: GGAGCCGGTGGCCGAGGGGCATGAGAAGCGCCTGGA...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTACGGGGACCTGGGGTaGGTCGGAAACACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGYGDLG*VGNTPL
Trigger: TAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTA...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGCCCCTCCGCCAAGCCTaGTTCCCACAGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLPLRQA*FPQHLN
Trigger: GTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGG...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACGACGGGCGCGGCCGGTaGTGGCGGCACAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANDGRGR*WRHSFL
Trigger: CAGAAAGCTGTGCCGCCACCACCGGCCGCGCCCGTC...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCCAGGGCTGCTGGGCTaGGAGGCCGAGTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: HREGTANGRYGDLGCVGNPGLLG*EAESPS
Trigger: TGAGGGTGACTCGGCCTCCCAGCCCAGCAGCCCTGG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACCTGCGATCCCTGCCTTaGACTCGCCGGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDLRSLP*TRRCLF
Trigger: AAAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAG...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGTCTCTCCCTTGTTTaGGGGCGTCTGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLGLSLV*GRLRRW
Trigger: CCACCTCCGCAGACGCCCCCAAACAAGGGAGAGACC...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCCGGCCAGGTCACAGGTaGGAGGCTGCTGGGACATCG +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCRPGHR*EAAGTS
Trigger: CGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCG...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTCGGCCAGGTCACAGGTaGGAGGCTGCTGGGACATCG +
Preference number: 4 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPRPGHR*EAAGTS
Trigger: CGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCG...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCTGGCCGGATCAGGGGTaGGGGCCTGTCATACTGGGC +
Preference number: 4 (lower is better)
Translates to: RDVRCLLRSSPAVLPWSGWPDQG*GPVILG
Trigger: GCCCAGTATGACAGGCCCCCACCCCTGATCCGGCCA...GCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTTGGGCGGGTGGCCCTTaGTCACTCCCACAGGCACGT +
Preference number: 4 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPWAGGP*SLPQAR
Trigger: ACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCA...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCCAACCCAGGGCCGCTaGCACCCCATCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HREGTANGRYGDLGCVGNPTQGR*HPIPGR
Trigger: TCTACCAGGGATGGGGTGTCAGCGGCCCTGGGTTGG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGTTCAGCAGCCGGTTaGAGGCCGAGGCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMERSAAG*RPRRSW
Trigger: CCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACG...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGCCTCTGCCCCCTTCTTaGTGCTCCGCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRPLPPS*CSAAGL
Trigger: GAGTCCTGCTGCGGAGCAGCAAGAAGGGGGCAGAGG...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGCGGCTGGTGCATCCTaGTCACGCTTGCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLAAGAS*SRLRFS
Trigger: GGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGC...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGCCCCTCCGCCAAGCCTaGTTCCCACAGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLLGHREGTANGRYGDLGPLRQA*FPQHLN
Trigger: GTTCAGGTGCTGTGGGAAGCAGGCTTGGCGGAGGGG...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGGGTCTCTCCCCTCTGTaGTCCAACCCAGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMEGLSPL*SNPGPL
Trigger: CAGCGGCCCTGGGTTGGAGCACAGAGGGGAGAGACC...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542818.1
CDS-3UTR CCA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACGGGCCCCTGCGCGGCTaGTGCATCCTGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANGPLRG*CILLTL
Trigger: AAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCC...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGTGCCCTGGCCGGTGGTaGCTGCGGCCCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVCPGRW*LRPCGW
Trigger: CCAACCGCAGGGCCGCAGCCACCACCGGCCAGGGCA...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 4 (lower is better)
Translates to: QSLLTWEAPVTVLSLATLAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...CAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGCCGTTACGGGGACCTaGGGTGCGTCGGAAACACGC +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQAVTGT*GASETR
Trigger: GCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGC...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp AGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGCGGCCAGGTCACAGGTaGGAGGCTGCTGGGACATCG +
Preference number: 4 (lower is better)
Translates to: RRGICLQFPLQRSGSGCERPGHR*EAAGTS
Trigger: CGATGTCCCAGCAGCCTCCCACCTGTGACCTGGCCG...CTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGCCCAGGCCCCGTACTTaGGGTACTCGGCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVPRPRT*GTRPAR
Trigger: CCGAGCCGGCCGAGTACCTCAAGTACGGGGCCTGGG...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGGCGGCGATGCACGCGTaGGTGCAGCACCATCTGATG +
Preference number: 4 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMEAAMHA*VQHHLM
Trigger: CATCAGATGGTGCTGCACTCACGCGTGCATCGCCGC...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAAGCTTTTCTGCAGGGTaGCCCGTCTGGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTSFSAG*PVWPSA
Trigger: AGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCT...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGAGCTTTTCTGCAGGGTaGCCCGTCTGGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQSFSAG*PVWPSA
Trigger: AGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCT...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CGGGGACCTGGGGTGCGTCGGAAACACGCCTTTAGGTTCCCTTTCTCAGAGGCACCACGGAGTTGCAGCTaGCGCGGTGCCAGATGCGTT +
Preference number: 4 (lower is better)
Translates to: RGPGVRRKHAFRFPFSEAPRSCS*RGARCV
Trigger: AACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGG...TGCCTCTGAGAAAGGGAACCTAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617840.1
CDS-3UTR TCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGACAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGAGGAGTGTGAGACGATaGAACCCACATGTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWRSVRR*NPHVPE
Trigger: CTCCGGCACATGTGGGTTTCATCGTCTCACACTCCT...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGGCGTCCTCCTCACTTaGAGTCCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCGVLLT*SPGLWL
Trigger: CAACCACAGGCCAGGACTTCAAGTGAGGAGGACGCC...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGTGCTTGCGCATGTGCTaGGAAAGCGAGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWCLRMC*ESELWK
Trigger: CTTCCAGAGCTCGCTTTCGCAGCACATGCGCAAGCA...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTATCGGACAGCTTTTCTaGAGGGTGACCCGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAIGQLF*RVTRLA
Trigger: GGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGAT...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGAGGCCGTCTCCTTATTaGTGGGGTCATCCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASRPSPY*WGHPAS
Trigger: CGACGCGGGATGACCCCAGCAATAAGGAGACGGCCT...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAACGACTAAAGCCGCCTaGAGGGAGGAGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPTTKAA*REEAVS
Trigger: GGAGACGGCCTCCTCCCTGCAGGCGGCTTTAGTCGT...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGACTTCTCCACAGGCTTaGTATTGGCCGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPTSPQA*YWPRAA
Trigger: CGCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGT...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGAGTCCGGGGCACTGTaGTTATTTGTGGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWESGAL*LFVGAK
Trigger: CTTTGCCCCCACAAATAAGCACAGTGCCCCGGACTC...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAGCCCCCTTCGCCCTTTaGAGGAGGTGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETAPFAL*RRWTLR
Trigger: CCTCAGGGTCCACCTCCTGCAAAGGGCGAAGGGGGC...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTTACGGGGACCTGGGGTaGGTCGGAAACACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAYGDLG*VGNTPL
Trigger: TAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTA...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp GCTCCGGCGTGTGCTCCCACCAACCACGGCAAACAAAGGCGTCCTCCTCACTTGGGCCCCAGGGAGGAGTaGGATGGAGCCAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: APACAPTNHGKQRRPPHLGPREE*DGASEQ
Trigger: TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCC...CAAGTGAGGAGGACGCCTTTGTTTGCCGTGGTTGGTGGGAGCACACGCCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGGGCCCCAGGGAGGAGTaGGATGGAGCCAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRGPREE*DGASEQ
Trigger: TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCC...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCCACACATCCAGGCCTaGCCACAGCTGGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCPHIQA*PQLASR
Trigger: CCTTGAGGCCAGCTGTGGGCAGGCCTGGATGTGTGG...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGGCCGACCAGAGTTaGCAGCCTGGAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQEADQS*QPGEAP
Trigger: TGGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTC...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACTCTGGTCTCCACTaGAGAGCTCGGTCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWDSGLH*RARSKS
Trigger: TGACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTC...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAAGGTGGCCGGGCTGGTaGAAGCTCTTTCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPRWPGW*KLFPHS
Trigger: CGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACCT...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGCTGAGGTGGCCGGGCTaGTGGAAGCTCTTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQLRWPG*WKLFPH
Trigger: GTGCGGAAAGAGCTTCCACCAGCCCGGCCACCTCAG...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCCAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCQVGGC*DIVRVL
Trigger: CAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTG...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RLLGHREGTANGRYGDLGPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTCGGTGGCTCCGGATGTaGATCTTCAGGTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPRWLRM*IFRLPF
Trigger: GAAGGGCAACCTGAAGATTCACATCCGGAGCCACCG...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTGCACCTGAGTGCGGGTaGACCGAGCAAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PCSLKECETMKPTCAGAPAPECG*TEQGAK
Trigger: CTTTGCTCCTTGCTCGGTTCACCCGCACTCAGGTGC...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAACCACCGGCTCCTGTTTaGTGGAGTGTAGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQPPAPV*WSVGRG
Trigger: CCCCCGTCCTACACTCCATCAAACAGGAGCCGGTGG...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCAGCGGCTCGGGATGTaGGGTGTCTGCTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HREGTANGRYGDLGCVGNQRLGM*GVCSGV
Trigger: AACTCCTGAGCAGACACCTCACATCCCGAGCCGCTG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR TCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGCTTCCCACAGCACCTaGACGTCACCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCASHST*TSPPSS
Trigger: AGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGC...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGAGGCACCATGGAGATaGAGCTTGCCCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAEAPWR*SLPFLH
Trigger: GTGCAGAAAGGGCAAGCTTCATCTCCATGGTGCCTC...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGTGCGCCTGGTGCACGTaGAGCTCCAGGTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRCAWCT*SSRSFL
Trigger: TAAGAAGGACCTGGAGCTGCACGTGCACCAGGCGCA...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCCCGTCTTGGGGCCGTaGGCCTTCATGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLPVLGP*AFMWFL
Trigger: CAAGAACCACATGAAGGCGCACGGCCCCAAGACGGG...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGATCGGACAGCTTTTCTaGAGGGTGACCCGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLIGQLF*RVTRLA
Trigger: GGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGAT...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTACGGGGACCTGGGGTaGGTCGGAAACACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RLLGHREGTANGRYGDLGYGDLG*VGNTPL
Trigger: TAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTA...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGTCCTCCTGCACTCTGTaGACCCTGCGCGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVSSCTL*TLRGPA
Trigger: TGCGGGGCCGCGCAGGGTGCACAGAGTGCAGGAGGA...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAACCCTCAGCGACCTGTaGACAGTGGCCGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETTLSDL*TVAGSG
Trigger: CCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGT...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGTTGCAGAAGGAGCACTaGACCGCTGCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRGICLQFPLQRSGSGCELQKEH*TAALAS
Trigger: GGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAA...CTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGCGGTGGATGGCATTGTaGGCGTTCAAGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRRWMAL*AFKLSR
Trigger: CCTGGACAGCTTGAACGCCCACAATGCCATCCACCG...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGCGACTCTGCGGTGGATaGCATTGTGGGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLRLCGG*HCGRSS
Trigger: GCTTGAACGCCCACAATGCCATCCACCGCAGAGTCG...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGCGGGCACCTCCTGCTTaGGGTGAAATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: RLLGHREGTANGRYGDLGRAPPA*GEMLAS
Trigger: AGATGCCAGCATTTCACCCCAAGCAGGAGGTGCCCG...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCCGTCTCCTTATTGCTaGGGTCATCCCGCGTCGACC +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLPSPYC*GHPAST
Trigger: GGTCGACGCGGGATGACCCCAGCAATAAGGAGACGG...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAAGGTGGCCGGGCTGGTaGAAGCTCTTTCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETRWPGW*KLFPHS
Trigger: CGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACCT...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAGGGCGTCTGCGGAGGTaGTATGAACTTCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGGRLRR*YELQNP
Trigger: GGGGTTCTGAAGTTCATACCACCTCCGCAGACGCCC...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CGGGGACCTGGGGTGCGTCGGAAACACGCCTTTAGGTTCCCTTTCTCAGAGGCACAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: RGPGVRRKHAFRFPFSEAQVGGC*DIVRVL
Trigger: CAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTG...TGCCTCTGAGAAAGGGAACCTAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542818.1
ENST00000617840.1
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGATGAACATTTTCCCTTaGGCGGGTGGCCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWMNIFP*AGGPWS
Trigger: TGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCAT...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGACCTCCTGCTTGGGGTaGAATGCTGGCATCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWTSCLG*NAGIFK
Trigger: CTTAAAGATGCCAGCATTTCACCCCAAGCAGGAGGT...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGTGTGGCTCCTGGCCGTaGCAAGGTTTGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLCGSWP*QGLVCR
Trigger: TCGACAGACCAAACCTTGTCACGGCCAGGAGCCACA...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGCTTCCCACAGCACCTaGACGTCACCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQASHST*TSPPSS
Trigger: AGAGGAAGGAGGTGACGTTCAGGTGCTGTGGGAAGC...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCACCCAAGGGGCTGGTaGTCCCCACCCTTTATGAAC +
Preference number: 4 (lower is better)
Translates to: HREGTANGRYGDLGCVGNHPRGW*SPPFMN
Trigger: GTTCATAAAGGGTGGGGATCACCAGCCCCTTGGGTG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACGCATGCGGACCCCTCTaGCCCCTTCTTGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHACGPL*PLLAAP
Trigger: CGGAGCAGCAAGAAGGGGGCAGAGGGGTCCGCATGC...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAACACCACTGGAGGAAGAACTaGTTGGTGTCCGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LNMGGPCDSAQPRHSVQHHWRKN*LVSEGP
Trigger: GGGGCCCTCGGACACCAAGCAGTTCTTCCTCCAGTG...GTGTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGACTTCTCCACAGGCTTaGTATTGGCCGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLTSPQA*YWPRAA
Trigger: CGCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGT...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGAGTCCGGGGCACTGTaGTTATTTGTGGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCESGAL*LFVGAK
Trigger: CTTTGCCCCCACAAATAAGCACAGTGCCCCGGACTC...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGGAAAAGACACCCACTTaGTGGGGTGGCTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLGHREGTANGRYGDLGEKTPT*WGGSGK
Trigger: CTTCCCTGAGCCACCCCAGCAAGTGGGTGTCTTTTC...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACCCACGCCTGCTCTCCTaGAAGCCAGGAAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANPRLLS*KPGRIQ
Trigger: CTGGATCCTTCCTGGCTTGCAGGAGAGCAGGCGTGG...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAATGTGCCGGAGCCCCTaGAGAGGTGTTCTCACACCC +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETMCRSP*RGVLTP
Trigger: GGGTGTGAGAACACCTCTGCAGGGGCTCCGGCACAT...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTAAACCTCTGAGAATTTaGTGGGGGTGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFPGCSSMERPGHRWEAAKPLRI*WGWQRR
Trigger: CCTCCTCTGCCACCCCCAGCAAATTCTCAGAGGTTT...AGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGCATTGCAAACCACAGTaGCAGCCCTTGTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLHCKPQ*QPLCPH
Trigger: GTGGGGACACAAGGGCTGGCACTGTGGTTTGCAATG...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGACTCTGGTCTCCACTaGAGAGCTCGGTCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLDSGLH*RARSKS
Trigger: TGACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTC...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCGATCCCTGCCTTaGACTCGCCGGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCLRSLP*TRRCLF
Trigger: AAAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAG...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACACCTCCGCTCCCGTACTaGAAGGGAACTCCACACCAT +
Preference number: 4 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTPPLPY*KGTPHH
Trigger: ATGGTGTGGAGTTCCCTTCCAGTACGGGAGCGGAGG...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACAATACTGACGATGGGTaGAAGGAAGGGACCACACAT +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDNTDDG*KEGTTH
Trigger: ATGTGTGGTCCCTTCCTTCCACCCATCGTCAGTATT...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CAA 72 bp ATGAAGAATGAACATTTTCCCTTGGGCGGGTGGCCCTaGGTCACTCCCACAGGCACGTTACCGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: MKNEHFPLGGWP*VTPTGTLPGSG
Trigger: GCCGGAGCCCGGTAACGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAAATGTTCATTCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGAGCCAGTGAACAATaGGGGTCTCATCATCATACC +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLGASEQ*GSHHHT
Trigger: GGTATGATGATGAGACCCTCATTGTTCACTGGCTCC...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGTGTGAATCTTCAGGTTaGCCTTCTGGGAAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLCESSG*PSGKPG
Trigger: ACCGGGCTTCCCAGAAGGGCAACCTGAAGATTCACA...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAGAATCAGAGTCCCCGTaGGGTGGCTCCGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETESESP*GGSGCE
Trigger: TTCACATCCGGAGCCACCGCACGGGGACTCTGATTC...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCGGTGCTTCTTCATGTaGGCCTTCAGGAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLRCFFM*AFRNQV
Trigger: GACCTGGTTCCTGAAGGCGCACATGAAGAAGCACCG...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGCCATCTGATGATAGGTaGGGAAGATCTTGCCGCACT +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLPSDDR*GRSCRT
Trigger: AGTGCGGCAAGATCTTCCGCACCTATCATCAGATGG...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCTATGGACACAGAAGCTaGGATCCCTGCCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: RDVRCLLRSSPAVLPWSGYGHRS*DPCLGL
Trigger: GAGTCCAAGGCAGGGATCGCAGCTTCTGTGTCCATA...GCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGTTGCAGCTGACGCGGTaGCAGATGCGTTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQLQLTR*QMRLCI
Trigger: GATGCACAAACGCATCTGGCACCGCGTCAGCTGCAA...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCATTGCAGCTGACGCGGTaGCAGATGCGTTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPLQLTR*QMRLCI
Trigger: GATGCACAAACGCATCTGGCACCGCGTCAGCTGCAA...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGTCTTTCCGCACTCGATaGAGACGAACTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQSFRTR*RRTLLA
Trigger: GGCCAGGAGAGTTCGTCTGCATCGAGTGCGGAAAGA...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACATCACAGGTGGGAGGCTaGTGGGACATCGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETSQVGG*WDIVRV
Trigger: TACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGA...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp AGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGCAGACGTGTCTCCTTTaGCAGATTCGCTCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: SSPAVLPWSGQVTGGRLLQTCLL*QIRSVR
Trigger: TCGAACTGAGCGAATCTGGCAAAGGAGACACGTCTG...CAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACATCTGCACTCAACCCCTaGAGCCTGAAGGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTSALNP*SLKECE
Trigger: CTCACACTCCTTCAGGCTGCAGGGGTTGAGTGCAGA...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACACGAAAGCCCAGGAGGTaGCCTCTTCCACACAACAGA +
Preference number: 4 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTRKPRR*PLPHNR
Trigger: TCTGTTGTGTGGAAGAGGGCACCTCCTGGGCTTTCG...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGACAACGCTCCCAGTTaGATGCTGGTACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLGHREGTANGRYGDLGCDNAPS*MLVLSA
Trigger: AGCTGAGAGTACCAGCATCCAACTGGGAGCGTTGTC...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCAGAGTGTGCCCGCATGTaGGCCCTGAGGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAECARM*ALRWPG
Trigger: GCCCGGCCACCTCAGGGCCCACATGCGGGCACACTC...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGAATTTCCTCCAGGTGTaGCTGAGTCAGAATTCCGTC +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWNFLQV*LSQNSV
Trigger: GACGGAATTCTGACTCAGCCACACCTGGAGGAAATT...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGCCTGGACCACGTTGTTaGTGGTGGCGATGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAPGPRC*WWRWGP
Trigger: TGGACCCCATCGCCACCATCAACAACGTGGTCCAGG...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACTTAAATCTAGCGGCATaGGGTCTGGGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHLNLAA*GLGPAP
Trigger: GGGCGCTGGCCCCAGACCTCATGCCGCTAGATTTAA...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTCCACGGAGTTGCAGCTaGCGCGGTGCCAGATGCGTT +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSPRSCS*RGARCV
Trigger: AACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGG...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCAACAGAAGAGTCTTCTaGTTTCTTAGGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGNRRVF*FLRWTE
Trigger: CTCTGTCCACCTAAGAAATCAGAAGACTCTTCTGTT...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGCCAATTGCTACTTCCTaGAGCACCTGCTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLLGHREGTANGRYGDLPIATS*STCFSG
Trigger: CCCTGAAAAGCAGGTGCTTCAGGAAGTAGCAATTGG...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAGGGCGCTCCTTTCTCTaGCGAAGTAACTGTATGCAA +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGGRSFL*RSNCMQ
Trigger: TTGCATACAGTTACTTCGTCAGAGAAAGGAGCGCCC...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTTGCGTCCTGTATGGGTaGCAGTGCAAGGGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCCVLYG*QCKGKN
Trigger: GTTCTTACCCTTGCACTGTCACCCATACAGGACGCA...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAAAAGAGCCAAAAGACGTaGCTGCTCCCAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQKSQKT*LLPGGA
Trigger: TGCACCTCCTGGGAGCAGGCACGTCTTTTGGCTCTT...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGAGAAGCTGCGATCCCTaGCTTGGACTCGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPARSCDP*LGLAGV
Trigger: GACACCGGCGAGTCCAAGGCAGGGATCGCAGCTTCT...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGAGAAGCTGCGATCCCTaGCTTGGACTCGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVRSCDP*LGLAGV
Trigger: GACACCGGCGAGTCCAAGGCAGGGATCGCAGCTTCT...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTACGACTAAAGCCGCCTaGAGGGAGGAGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPTTKAA*REEAVS
Trigger: GGAGACGGCCTCCTCCCTGCAGGCGGCTTTAGTCGT...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAACAAGGAGAGGCATCTaGCTTCAGTTTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGTRRGI*LQFPLQ
Trigger: CTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGT...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGTATGCAACTCCCAATTaGTACTTCCTGAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWYATPN*YFLKHL
Trigger: CAGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATA...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAAGAAGCTTGCCCTTTCTaGACTCAACCCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQEACPF*TQPLQP
Trigger: AGGCTGCAGGGGTTGAGTGCAGAAAGGGCAAGCTTC...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACACTGGACCGCTGCCTTaGCCTCCCCCGGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNTGPLP*PPPGRM
Trigger: CATGCGCCCCGGGGGAGGCCAAGGCAGCGGTCCAGT...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACTACTGTTTTCAAGTATaGACACAGAAGCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDYCFQV*TQKLRS
Trigger: GGATCGCAGCTTCTGTGTCCATACTTGAAAACAGTA...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACGCAAGGAGCAAAGGCTaGCATTCTTTGCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANARSKG*HSLPPR
Trigger: CCTCGGTGGCAAAGAATGCCAGCCTTTGCTCCTTGC...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACATGTGGGCCCTGAGGTaGCCGGGCTGGTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VSFARFAQFEWWEEWNRHMWALR*PGWWKL
Trigger: GAGCTTCCACCAGCCCGGCCACCTCAGGGCCCACAT...GTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGCCGGCTGTTCTTCCATaGAGCGGCCAGGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAPAVLP*SGQVTG
Trigger: ACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGG...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGTTCGCTCAGTTCGAATaGTGGGAAGAATGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPFAQFE*WEEWNR
Trigger: CCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAA...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGGTGGGCAGGTACAGTaGCCAATTTCCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQGGQVQ*PISQRR
Trigger: TCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACC...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGTTTCCCTTGGGCGGGTaGCCCTTGGTCACTCCCACA +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAFPLGG*PLVTPT
Trigger: TGTGGGAGTGACCAAGGGCCACCCGCCCAAGGGAAA...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTTGCACAGCCTGCACTTaGACGGCTTGTGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPCTACT*TACAPG
Trigger: ACCAGGCGCACAAGCCGTTCAAGTGCAGGCTGTGCA...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTACCTCCTGCTTGGGGTaGAATGCTGGCATCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PCSLKECETMKPTCAGAPTSCLG*NAGIFK
Trigger: CTTAAAGATGCCAGCATTTCACCCCAAGCAGGAGGT...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACTCTGCGGAGGTGGTATaGACTTCAGAACCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHSAEVV*TSEPRG
Trigger: GCCTCGGGGTTCTGAAGTTCATACCACCTCCGCAGA...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp CTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAACACCAGCCTGAAGGAGTGTaGGACGATGAAACCCACATG +
Preference number: 4 (lower is better)
Translates to: LNMGGPCDSAQPRHSVQHQPEGV*DDETHM
Trigger: CATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTG...GTGTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAAGAAAGCATCCCTACTaGCCCTGTAACCTACACCCT +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPRKHPY*PCNLHP
Trigger: AGGGTGTAGGTTACAGGGTCAGTAGGGATGCTTTCT...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGTCTCGGCCTCTCTGTTaGGATCCATCCGAAGGACGG +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVSRPLC*DPSEGR
Trigger: CCGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGA...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCAAGGCTGGCATTCTTTaGCACCGAGGGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SERLTRRGICLQFPLQRSKAGIL*HRGQAG
Trigger: CCCCGCCTGCCCTCGGTGGCAAAGAATGCCAGCCTT...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGACAAGGAGAGGCATCTaGCTTCAGTTTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLTRRGI*LQFPLQ
Trigger: CTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGT...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCAGACGTGTCTCCTTTaGCAGATTCGCTCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCQTCLL*QIRSVR
Trigger: TCGAACTGAGCGAATCTGGCAAAGGAGACACGTCTG...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCGCACTCTGTGCACCCTaGGCGGCCCCGCAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISERLTRRGICLQFPLQRALCAP*AAPQAD
Trigger: GTCAGCTTGCGGGGCCGCGCAGGGTGCACAGAGTGC...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGTACTGTTTTCAAGTATaGACACAGAAGCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGYCFQV*TQKLRS
Trigger: GGATCGCAGCTTCTGTGTCCATACTTGAAAACAGTA...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTTGCTTTTGTAACCATTaGGCTGAATCCACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCCFCNH*AESTGE
Trigger: CTCCCCCGTGGATTCAGCCCAATGGTTACAAAAGCA...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
3UTR CAA 72 bp CACCCTCTCTGTCCAAAGAACAGAGGCCGACCAGAGTaGCCAGCCTGGAGAGGCACCATGGAGATGAAGCTT +
Preference number: 4 (lower is better)
Translates to: HPLCPKNRGRPE*PAWRGTMEMKL
Trigger: AAGCTTCATCTCCATGGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTCTGTTCTTTGGACAGAGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACTTAAATCTAGCGGCATaGGGTCTGGGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VSFARFAQFEWWEEWNRHLNLAA*GLGPAP
Trigger: GGGCGCTGGCCCCAGACCTCATGCCGCTAGATTTAA...GTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGCACCTGAGTGCGGGTaGACCGAGCAAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SERLTRRGICLQFPLQRSAPECG*TEQGAK
Trigger: CTTTGCTCCTTGCTCGGTTCACCCGCACTCAGGTGC...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGTGGGACTATGGACGATaGGCACGTAAATGCGTATAT +
Preference number: 4 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRWDYGR*ARKCVY
Trigger: ATATACGCATTTACGTGCTCATCGTCCATAGTCCCA...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTTTAGGAGCCAGTGAACAATaGGGGTCTCATCATCATACC +
Preference number: 4 (lower is better)
Translates to: GTANGRYGDLGCVGNTPLGASEQ*GSHHHT
Trigger: GGTATGATGATGAGACCCTCATTGTTCACTGGCTCC...TAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617840.1
CDS-3UTR TCA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTGTCTGTTTAACTGGGTaGAAACCTTCCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: EASAFSFHSSAAARDVRCVCLTG*KPSSCT
Trigger: AGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGAC...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTCTGGGAATGTGGAAATaGAATGACAACGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PCSLKECETMKPTCAGAPLGMWK*NDNAPS
Trigger: ACTGGGAGCGTTGTCATTGCATTTCCACATTCCCAG...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTGCCAAAAGACGTGCCTaGTCCCAGGAGGTGCACCTT +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSAKRRA*SQEVHL
Trigger: AAGGTGCACCTCCTGGGAGCAGGCACGTCTTTTGGC...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTGTGTGCTTGCGCATGTaGTGCGAAAGCGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPVCLRM*CESELW
Trigger: CCAGAGCTCGCTTTCGCAGCACATGCGCAAGCACAC...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACAACAAGGAGAGGCATCTaGCTTCAGTTTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETTRRGI*LQFPLQ
Trigger: CTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGT...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443185.7
ENST00000542818.1
ENST00000617840.1
CDS-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAACATGGAGATGAAGCTTaGCCTTTCTGCACTCAACCC +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQHGDEA*PFCTQP
Trigger: GGGTTGAGTGCAGAAAGGGCAAGCTTCATCTCCATG...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCCCAGTTGGATGCTaGTACTCTCAGCTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLLPVGC*YSQLKV
Trigger: CACTTTTAGCTGAGAGTACCAGCATCCAACTGGGAG...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACCGCTTGCGCTTCTCCTaGCTCACCAGGACGTACTCG +
Preference number: 4 (lower is better)
Translates to: VSFARFAQFEWWEEWNRHRLRFS*LTRTYS
Trigger: CGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCG...GTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCTTGTTGCGCGGCTGTCCCCCTaGTGCAGGTTCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRGSSINTRSTSNPPRLVARLSP*CRFRGA
Trigger: GGCGCCCCTGAACCTGCACCAGGGGGACAGCCGCGC...AACAAGACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCGGGCACCTCCTGCTTaGGGTGAAATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGRAPPA*GEMLAS
Trigger: AGATGCCAGCATTTCACCCCAAGCAGGAGGTGCCCG...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CGGGGACCTGGGGTGCGTCGGAAACACGCCTTTAGGTTCCCTTTCTCAGAGGCATTCGCTCAGTTCGAATaGTGGGAAGAATGGAACAGG +
Preference number: 4 (lower is better)
Translates to: RGPGVRRKHAFRFPFSEAFAQFE*WEEWNR
Trigger: CCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAA...TGCCTCTGAGAAAGGGAACCTAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617840.1
CDS-3UTR CCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTCCAGAGCCTCCAGGATaGAGCCTCACCAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSPEPPG*SLTSKT
Trigger: TGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTCTGG...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCCCACCGGCTCCTGTTTaGTGGAGTGTAGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: ISERLTRRGICLQFPLQRPPAPV*WSVGRG
Trigger: CCCCCGTCCTACACTCCATCAAACAGGAGCCGGTGG...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGGAAAGTAAAGCTATGTaGATGCCGTCCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSLLTWEAPVTVLSLATLESKAM*MPSFLP
Trigger: AGGAAGGAAGGACGGCATTCACATAGCTTTACTTTC...CAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAAACGCTCCCAGTTGGATaGTGGTACTCTCAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RMEQAHGPREECDGASEQTLPVG*WYSQLK
Trigger: TTTTAGCTGAGAGTACCAGCATCCAACTGGGAGCGT...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCCATCCTGCTCACGCTTaGGCTTCTCCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SERLTRRGICLQFPLQRSHPAHA*ASPGSP
Trigger: TGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATG...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAGAGTGTTCCTTGTTGTaGAAATCGGACAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GHREGTANGRYGDLGCVGECSLL*KSDSFS
Trigger: AGAAAAGCTGTCCGATTTGCACAACAAGGAACACTC...TCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACAAGGCTGGCATTCTTTaGCACCGAGGGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNKAGIL*HRGQAG
Trigger: CCCCGCCTGCCCTCGGTGGCAAAGAATGCCAGCCTT...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGTGCCCCTACTGTGCCTaGCAGTACTACTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQCPYCA*QYYCLL
Trigger: TAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCA...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCAAGACAGATGCCTTGTaGCCCTACTGTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGKTDAL*PYCACQ
Trigger: CTGGCAGGCACAGTAGGGGCACAAGGCATCTGTCTT...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACTACAGAAGTGTATCATaGAGAAATTACCATTCGGAA +
Preference number: 4 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDYRSVS*RNYHSE
Trigger: TTCCGAATGGTAATTTCTGCATGATACACTTCTGTA...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGTCCTATCTCTCCATaGTCAGAAGAGCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETRPISP*SEEPKD
Trigger: GTCTTTTGGCTCTTCTGACCATGGAGAGATAGGACG...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACCTCAGGTTCAGGCACTaGAGGAAGAACTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHLRFRH*RKNCLV
Trigger: CACCAAGCAGTTCTTCCTCCAGTGCCTGAACCTGAG...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCGCAAGGAGCAAAGGCTaGCATTCTTTGCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGARSKG*HSLPPR
Trigger: CCTCGGTGGCAAAGAATGCCAGCCTTTGCTCCTTGC...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGCAGGGACCTCCGGAATaGCTCTCCTTATTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVQGPPE*LSLFLG
Trigger: GCCTAAGAATAAGGAGAGCCATTCCGGAGGTCCCTG...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp AGTATTAATACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCAGGCCGCGTCGCCCCTaGACCCCGCAGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SINTRSTSNPPRLVLTSSRPRRP*TPQHRW
Trigger: CCACCTGTGCTGCGGGGTCCAGGGGCGACGCGGCCT...GGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTATTAATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGGTCGCAAAGTCCTTTaGAATGTACGTCTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: FHSSAAARDVRCLLRSSPGRKVL*NVRLKD
Trigger: ATCTTTAAGACGTACATTCCAAAGGACTTTGCGACC...CGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGATCGGGAGGACTCAGTaGCTAAATAATTTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGIGRTQ*LNNLLR
Trigger: TCTTAACAAATTATTTAGCCACTGAGTCCTCCCGAT...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACAGGCCTGCCCACAGCTaGCCTCAAGGGATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNRPAHS*PQGMAF
Trigger: GAACGCCATCCCTTGAGGCCAGCTGTGGGCAGGCCT...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTCCGAGTCACCCTCACTaGGTGATCCGCAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTPSHPH*VIRSGP
Trigger: GGGCCCGCTGCGGATCACTCAGTGAGGGTGACTCGG...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCATGTGGCTCCTGGCCGTaGCAAGGTTTGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQACGSWP*QGLVCR
Trigger: TCGACAGACCAAACCTTGTCACGGCCAGGAGCCACA...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGTCTCAAACTTGTCTTaGATAAGACAGATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASVSNLS*IRQMPC
Trigger: ACAAGGCATCTGTCTTATTCAAGACAAGTTTGAGAC...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAAAATTCACCTGGCTTTaGAGCCAAATCTGTATGGTG +
Preference number: 4 (lower is better)
Translates to: GCEVSAQEFPGCSSMERPKFTWL*SQICMV
Trigger: CACCATACAGATTTGGCTTCAAAGCCAGGTGAATTT...TGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp ATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACATACACCCACTTTCTTTaGTCCAGAAAGCATCCCTAC +
Preference number: 4 (lower is better)
Translates to: IVRVLLMAVTGTWGASETYTHFL*SRKHPY
Trigger: GTAGGGATGCTTTCTGGATCAAAGAAAGTGGGTGTA...TGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAATTTACGCCACCCTCTaGAATTGGGGAAAAATGTCT +
Preference number: 4 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTIYATL*NWGKMS
Trigger: AGACATTTTTCCCCAATTTCAGAGGGTGGCGTAAAT...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACTCCTCCAGGTGTGGCTaGGTCAGAATTCCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNSSRCG*VRIPSA
Trigger: CGCGGACGGAATTCTGACTCAGCCACACCTGGAGGA...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACTTCTGTCGCGCGGGCTaGAGGGACCGTCCTATCTCT +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNFCRAG*RDRPIS
Trigger: AGAGATAGGACGGTCCCTGCAGCCCGCGCGACAGAA...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATCTTGGGCCTGTTCTTaGTGCCCGTCTTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: TSNPPRLVLTSSPQSLLTSWACS*CPSWGR
Trigger: ACGGCCCCAAGACGGGCAGCAAGAACAGGCCCAAGA...TGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACGAGTGTTCCTTGTTGTaGAAATCGGACAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HREGTANGRYGDLGCVGNECSLL*KSDSFS
Trigger: AGAAAAGCTGTCCGATTTGCACAACAAGGAACACTC...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGGCCGTCTCCTTATTaGTGGGGTCATCCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: ISERLTRRGICLQFPLQRRPSPY*WGHPAS
Trigger: CGACGCGGGATGACCCCAGCAATAAGGAGACGGCCT...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTGCTCCAAAGGCCAACTaGACTTTTCCATGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPAPKAN*TFPCRF
Trigger: GAAGCGGCATGGAAAAGTGCAGTTGGCCTTTGGAGC...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCATGCGAAAGCGAGCTCTaGAAGGGGAAGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQACESEL*KGKLLP
Trigger: CGGCAAGAGCTTCCCCTTCCAGAGCTCGCTTTCGCA...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGTTCTTACGCTCGAACTaGCTCTTGCAGAAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAFLRSN*LLQKEH
Trigger: GTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAA...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCATTCAGGAACCAGGTCTaGCTGAAGGCCTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAFRNQV*LKAWPH
Trigger: GTGTGGCCAGGCCTTCAGCCAGACCTGGTTCCTGAA...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCCCACAGGCTTGCTATTaGCCGAGGGCTGCGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RQGEAVVLILDQPQIHHVPQACY*PRAARQ
Trigger: CTGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGG...GACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp CAGATCGGGAGAGGTAGTAGAAAGTCTGTAACAGTCAGAAGACAACGTACAGAAATGTGGGCCCTGAGGTaGCCGGGCTGGTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QIGRGSRKSVTVRRQRTEMWALR*PGWWKL
Trigger: GAGCTTCCACCAGCCCGGCCACCTCAGGGCCCACAT...TTCTGTACGTTGTCTTCTGACTGTTACAGACTTTCTACTACCTCTCCCGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp ACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACAGGGGGCCTGTCATACTaGGCGCTCCTTTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: TSNPPRLVLTSSPQSLLTGGLSY*ALLSLT
Trigger: CGTCAGAGAAAGGAGCGCCCAGTATGACAGGCCCCC...TGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACACCACGTCTTGTTCTaGCATCATCCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAHHVLF*HHPHSP
Trigger: GGGACTGTGGGGATGATGTCAGAACAAGACGTGGTG...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGGATCCCCACCCTTTATaGACAAAGTCACTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPADPHPL*TKSLIL
Trigger: CAGGATGAGTGACTTTGTTCATAAAGGGTGGGGATC...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp ACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATCGAAGGAGCCCCGGTaGTTCTTCATGTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSNPPRLVLTSSPQSLLTSKEPR*FFMCAF
Trigger: GAAGGCGCACATGAAGAAGCACCGGGGCTCCTTCGA...TGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTTTGGAGCTAGCCTCCTaGCTGGGCTTGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRLELAS*LGLARG
Trigger: GCCCCTGGCCAAGCCCAGGCAGGAGGCTAGCTCCAA...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACTCACAGGTGGGAGGCTaGTGGGACATCGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNSQVGG*WDIVRV
Trigger: TACCCTCACGATGTCCCAGCAGCCTCCCACCTGTGA...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCAAAGACAGATGCCTTGTaGCCCTACTGTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAKTDAL*PYCACQ
Trigger: CTGGCAGGCACAGTAGGGGCACAAGGCATCTGTCTT...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACAACTGTCCTCCACGCCTaGTCTCCTGCAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSNPPRLVLTSSPQSLLTTVLHA*SPASQE
Trigger: TTCCTGGCTTGCAGGAGAGCAGGCGTGGAGGACAGT...TGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GAACCAGGCAGAAAGGTGGGCAGGTACAGTGGCCAATTTCCCAGAGAAGATCCTGCACCTGGGCTTTCCTaGGAATGTGGAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: EPGRKVGRYSGQFPREDPAPGLS*ECGNAM
Trigger: CATTGCATTTCCACATTCCCAGGAAAGCCCAGGTGC...AGGATCTTCTCTGGGAAATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCCAGATGCAGCAGGTGTaGCAGGTAGCCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISERLTRRGICLQFPLQRQMQQV*QVALSP
Trigger: TGGGGACAAGGCTACCTGCCACACCTGCTGCATCTG...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCAACGGCTTGTGCGCCTaGTGCACGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RQGEAVVLILDQPQIHHVNGLCA*CTCSSR
Trigger: CCTGGAGCTGCACGTGCACCAGGCGCACAAGCCGTT...GACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACCCTCCGCTCCCGTACTaGAAGGGAACTCCACACCAT +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNPPLPY*KGTPHH
Trigger: ATGGTGTGGAGTTCCCTTCCAGTACGGGAGCGGAGG...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCTGCTTTTGTAACCATTaGGCTGAATCCACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGCFCNH*AESTGE
Trigger: CTCCCCCGTGGATTCAGCCCAATGGTTACAAAAGCA...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTTGTGGCCGCGCCATGTaGCTCCTGGCCGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTCGRAM*LLAVTR
Trigger: CCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACA...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGGGTCGCAAAGTCCTTTaGAATGTACGTCTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLGRKVL*NVRLKD
Trigger: ATCTTTAAGACGTACATTCCAAAGGACTTTGCGACC...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp AGTATTAATACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCGCAGACGAACTCTCCTaGCCGGGCCTGCGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SINTRSTSNPPRLVLTSSADELS*PGLRPE
Trigger: CTCCGGACGCAGGCCCGGCCAGGAGAGTTCGTCTGC...GGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTATTAATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCCTTTTTCTACAGCTTaGAAACCTCTGAGAATTTGC +
Preference number: 4 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMEPFSTA*KPLRIC
Trigger: GCAAATTCTCAGAGGTTTCCAAGCTGTAGAAAAAGG...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCACCACTCGGGCCATCTaGGCATCTGTTCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SERLTRRGICLQFPLQRSTTRAI*ASVQMN
Trigger: GTTCATCTGAACAGATGCCCAGATGGCCCGAGTGGT...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TGTGTGTGTTTGTGTGTGTGTGTGTCTGTGTTTAAACAAGACTTTGTATCAGAAGTCACCCTCACTGAGTaGTCCGCAGCGGGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: CVCLCVCVSVFKQDFVSEVTLTE*SAAGPR
Trigger: GCGCGGGCCCGCTGCGGATCACTCAGTGAGGGTGAC...TTCTGATACAAAGTCTTGTTTAAACACAGACACACACACACACAAACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCAGCTTGGAAACCTCTaGGAATTTGCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVQLGNL*EFAGGG
Trigger: GCCACCCCCAGCAAATTCTCAGAGGTTTCCAAGCTG...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CAGATCGGGAGAGGTAGTAGAAAGTCTGTAACAGTCAGAAGACAACGTACAGAACACTTGAACGGCTTGTaGGCCTGGTGCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIGRGSRKSVTVRRQRTEHLNGL*AWCTCS
Trigger: GCTGCACGTGCACCAGGCGCACAAGCCGTTCAAGTG...TTCTGTACGTTGTCTTCTGACTGTTACAGACTTTCTACTACCTCTCCCGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCATTGTTTGGGGGCGTCTaGGGAGGTGGTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQALFGGV*GGGMNF
Trigger: GAAGTTCATACCACCTCCGCAGACGCCCCCAAACAA...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCCTTGTGCCCCTACTGTaGCTGCCAGTACTACTGTTT +
Preference number: 4 (lower is better)
Translates to: SERLTRRGICLQFPLQRSLVPLL*LPVLLF
Trigger: AAACAGTAGTACTGGCAGGCACAGTAGGGGCACAAG...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGACTGTCTACAAAAACTaGACTAGTCCATTACCGTAT +
Preference number: 4 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQTVYKN*TSPLPY
Trigger: ATACGGTAATGGACTAGTGCAGTTTTTGTAGACAGT...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTCTCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTTGTTTCGCTCTTGGTGGGGCTaGCGCAGGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VSATLPKITLQNSQLQLFRSWWG*RRRPGP
Trigger: AGGGCCTGGACGCCTGCGCCAGCCCCACCAAGAGCG...AAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCCCTGCGCGGTGATGTaGTCCCTCTCGATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRPCAVM*SLSMWL
Trigger: GAGCCACATCGAGAGGGACCACATCACCGCGCAGGG...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CAGATCGGGAGAGGTAGTAGAAAGTCTGTAACAGTCAGAAGACAACGTACAGAAACAGGTTCCCGCACTTaGCGCAGACCTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QIGRGSRKSVTVRRQRTETGSRT*RRPRRG
Trigger: GCCTCTACGAGGTCTGCGCCAAGTGCGGGAACCTGT...TTCTGTACGTTGTCTTCTGACTGTTACAGACTTTCTACTACCTCTCCCGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp ATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCGAATGGTGGGAAGAATaGAACAGGCACACGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ISERLTRRGICLQFPLQREWWEE*NRHTAP
Trigger: TGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTC...GCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCTCACTTGAAGTCCTaGCCTGTGGTTGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGPHLKS*PVVVSS
Trigger: AGATGAAACAACCACAGGCCAGGACTTCAAGTGAGG...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp GTCTCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTTGTTTTCCAGGCGCTTCTCATaGCCCTCGGCCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSATLPKITLQNSQLQLFSRRFS*PSATGS
Trigger: GGAGCCGGTGGCCGAGGGGCATGAGAAGCGCCTGGA...AAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTCAGGTGGGAGGCTGCTaGGACATCGTGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTQVGGC*DIVRVL
Trigger: CAGTACCCTCACGATGTCCCAGCAGCCTCCCACCTG...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCAACCAGGCAGAAAGGTaGGCAGGTACAGTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVNQAER*AGTVAN
Trigger: ATTGGCCACTGTACCTGCCCACCTTTCTGCCTGGTT...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTTGCTGTGAAAGAAAATaGGAAAAACACAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSCCERK*EKHSVS
Trigger: GGAGACGCTGTGTTTTTCTCATTTTCTTTCACAGCA...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCTTGTGCCCCTACTGTaGCTGCCAGTACTACTGTTT +
Preference number: 4 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVLVPLL*LPVLLF
Trigger: AAACAGTAGTACTGGCAGGCACAGTAGGGGCACAAG...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp ACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACAGAGACACCGAGAAGCTaGAGTGTAGACAACCAAACC +
Preference number: 4 (lower is better)
Translates to: TSNPPRLVLTSSPQSLLTETPRS*SVDNQT
Trigger: GGTTTGGTTGTCTACACTGCAGCTTCTCGGTGTCTC...TGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTAGTGGGTGTATTCAGTaGGGAAATAACATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSSGCIQ*GNNMCA
Trigger: AGCACACATGTTATTTCCCCACTGAATACACCCACT...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCACCACGTCTTGTTCTaGCATCATCCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRHHVLF*HHPHSP
Trigger: GGGACTGTGGGGATGATGTCAGAACAAGACGTGGTG...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTTCTTTCCGCACTCGATaGAGACGAACTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTSFRTR*RRTLLA
Trigger: GGCCAGGAGAGTTCGTCTGCATCGAGTGCGGAAAGA...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCTCATCAGTAAACCATTaGAAACCACAGTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVSSVNH*KPQCQP
Trigger: GGGCTGGCACTGTGGTTTGCAATGGTTTACTGATGA...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGACCGTCTCCTTATTGCTaGGGTCATCCCGCGTCGACC +
Preference number: 4 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGPSPYC*GHPAST
Trigger: GGTCGACGCGGGATGACCCCAGCAATAAGGAGACGG...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACCCCAGTCTGTTTAACTaGGTGAAAACCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNPSLFN*VKTFLL
Trigger: CAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTTTACATTGCATCGTTTaGAAGTGTTGCAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSLHCIV*KCCKVT
Trigger: GGTTACTTTGCAACACTTTCAAACGATGCAATGTAA...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCAGCTCGAACTGGCTCTTaGAGAAGGAGCACTGGACCG +
Preference number: 4 (lower is better)
Translates to: SSFISERLTRRGICLQFPARTGS*RRSTGP
Trigger: CGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGC...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACGCTTTCCTGGGAATGTaGAAATGCAATGACAACGCT +
Preference number: 4 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNAFLGM*KCNDNA
Trigger: AGCGTTGTCATTGCATTTCCACATTCCCAGGAAAGC...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TGTGTGTGTTTGTGTGTGTGTGTGTCTGTGTTTAAACAAGACTTTGTATCAGAAGGTCCAGCTCACTCTTaGGCCTGTTCTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CVCLCVCVSVFKQDFVSEGPAHS*ACSCCP
Trigger: CGGGCAGCAAGAACAGGCCCAAGAGTGAGCTGGACC...TTCTGATACAAAGTCTTGTTTAAACACAGACACACACACACACAAACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTCAGGGACCTCCGGAATaGCTCTCCTTATTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTQGPPE*LSLFLG
Trigger: GCCTAAGAATAAGGAGAGCCATTCCGGAGGTCCCTG...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCAGTCTCAAACTTGTCTTaGATAAGACAGATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAVSNLS*IRQMPC
Trigger: ACAAGGCATCTGTCTTATTCAAGACAAGTTTGAGAC...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp TGTGTGTGTTTGTGTGTGTGTGTGTCTGTGTTTAAACAAGACTTTGTATCAGAAAGGTGCGGAAGATCTTaGCGCACTCGAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: CVCLCVCVSVFKQDFVSERCGRS*RTRSTR
Trigger: CCGAGTGCTTCGAGTGCGGCAAGATCTTCCGCACCT...TTCTGATACAAAGTCTTGTTTAAACACAGACACACACACACACAAACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCAGAATGGTGGGAAGAATaGAACAGGCACACGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSFISERLTRRGICLQFPEWWEE*NRHTAP
Trigger: TGGGGCCGTGTGCCTGTTCCATTCTTCCCACCATTC...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR TCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTAAACCAACACAATACTaGCGATGGGTGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTKPTQY*RWVEGR
Trigger: CCTTCCTTCCACCCATCGTCAGTATTGTGTTGGTTT...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGATATGGACACAGAAGCTaGGATCCCTGCCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGYGHRS*DPCLGL
Trigger: GAGTCCAAGGCAGGGATCGCAGCTTCTGTGTCCATA...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTTGCCCCTACTGTGCCTaGCAGTACTACTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTCPYCA*QYYCLL
Trigger: TAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCA...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR GCA 90 bp AGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTCGACGAAGTAACTGTATaGAACTCCCAATTGCTACTT +
Preference number: 4 (lower is better)
Translates to: RQGEAVVLILDQPQIHHVDEVTV*NSQLLL
Trigger: AAGTAGCAATTGGGAGTTGCATACAGTTACTTCGTC...GACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGAGTACCTGTGTTAGAATaGTCTCTCCCTTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGVPVLE*SLPCLG
Trigger: CCCCAAACAAGGGAGAGACCATTCTAACACAGGTAC...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CAA 72 bp CAGGTCCGAATCGGGAGGACTCAGTGGCTAAATAATTaGTTAAGACGTATAGTCTTCCTTTGTAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QVRIGRTQWLNN*LRRIVFLCKQF
Trigger: AAACTGCTTACAAAGGAAGACTATACGTCTTAACAAATTATTTAGCCACTGAGTCCTCCCGATTCGGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
3UTR CAA 72 bp ACTTTTCAGAGCCTCAAAGGCAAAATTCACCTGGCTTaGAAGCCAAATCTGTATGGTGCTGAGAATGAAATC +
Preference number: 4 (lower is better)
Translates to: TFQSLKGKIHLA*KPNLYGAENEI
Trigger: GATTTCATTCTCAGCACCATACAGATTTGGCTTCAAAGCCAGGTGAATTTTGCCTTTGAGGCTCTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR TCA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCATTTCCATGCCGCTTCTaGAACAGTAAAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: SSFISERLTRRGICLQFPFPCRF*NSKNVD
Trigger: GTCTACATTTTTACTGTTTCAGAAGCGGCATGGAAA...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR GCA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGAACAAAAACTCGCATTTaGATTACTGAGGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGTKTRI*ITEEEV
Trigger: TACCTCTTCCTCAGTAATGCAAATGCGAGTTTTTGT...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CCA 90 bp AGTATTAATACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCATTGCGTACACTGCATaGTTTAAGATCCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SINTRSTSNPPRLVLTSSIAYTA*FKILCY
Trigger: ATAACAAAGGATCTTAAACCATGCAGTGTACGCAAT...GGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTATTAATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp GGACCCTGGCGCCGTCGGCCTGCGAGGCCCCGTTCAGCAGCCGGTTaGAGGCCGAGGCGCTCTTGGTGGGGCTGGCGCAGGCGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GPWRRRPARPRSAAG*RPRRSWWGWRRRPG
Trigger: GCCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGCCGACGGCGCCAGGGTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp CCCCGTTCAGCAGCCGGTTGCAGGCCGAGGCGCTCTTGGTGGGGCTaGCGCAGGCGTCCAGGCCCTCGGAGGCGCGCATCTCACCCAGCG +
Preference number: 5 (lower is better)
Translates to: PRSAAGCRPRRSWWG*RRRPGPRRRASHPA
Trigger: CGCTGGGTGAGATGCGCGCCTCCGAGGGCCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp GCGAGGCCCCGTTCAGCAGCCGGTTGCAGGCCGAGGCGCTCTTGGTaGGGCTGGCGCAGGCGTCCAGGCCCTCGGAGGCGCGCATCTCAC +
Preference number: 5 (lower is better)
Translates to: ARPRSAAGCRPRRSW*GWRRRPGPRRRASH
Trigger: GTGAGATGCGCGCCTCCGAGGGCCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp CCTGCGAGGCCCCGTTCAGCAGCCGGTTGCAGGCCGAGGCGCTCTTaGTGGGGCTGGCGCAGGCGTCCAGGCCCTCGGAGGCGCGCATCT +
Preference number: 5 (lower is better)
Translates to: PARPRSAAGCRPRRS*WGWRRRPGPRRRAS
Trigger: AGATGCGCGCCTCCGAGGGCCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp GCAGGACTCTGCCGCTGTCGGCCTGCGAGGCCCCGTTCAGGACCCTaGCGCCGTCGGCCTGCGAGGCCCCGTTCAGCAGCCGGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGLCRCRPARPRSGP*RRRPARPRSAAGCR
Trigger: CCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGCCGACGGCGCCAGGGTCCTGAACGGGGCCTCGCAGGCCGACAGCGGCAGAGTCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp CCCGGGGAGTCAGCAGCGGCACAGGCGGAGCCAGGGCTGCTGGGCTaGGAGGCCGAGTCACCCTCACTGAGTGATCCGCAGCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PGESAAAQAEPGLLG*EAESPSLSDPQRAR
Trigger: GCGGGCCCGCTGCGGATCACTCAGTGAGGGTGACTCGGCCTCCCAGCCCAGCAGCCCTGGCTCCGCCTGTGCCGCTGCTGACTCCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp CCGCTCGCGCGCTTCCGCGGGGGCCCCTGCGCGGCTGGTGCATCCTaGTCACGCTTGCGCTTCTCCTGGCTCACCAGGACGTACTCGCGC +
Preference number: 5 (lower is better)
Translates to: PLARFRGGPCAAGAS*SRLRFSWLTRTYSR
Trigger: GCGCGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCGCGCGAGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp CCCAGGCCCGCTCGCGCGCTTCCGCGGGGGCCCCTGCGCGGCTGGTaGATCCTGCTCACGCTTGCGCTTCTCCTGGCTCACCAGGACGTA +
Preference number: 5 (lower is better)
Translates to: PRPARALPRGPLRGW*ILLTLALLLAHQDV
Trigger: TACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCGCGCGAGCGGGCCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp TGGTGGGGCTGGGGCCTCGCCTCAGCTCCATCTCGGCCTCTCTGTTaGGATCCATCCGAAGGACGGGCGCGGCCGGTGGTGGCGGCACAG +
Preference number: 5 (lower is better)
Translates to: WWGWGLASAPSRPLC*DPSEGRARPVVAAQ
Trigger: CTGTGCCGCCACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCAGCCCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 90 bp TCGGGCTTGCCGTTCTCCACGCAGGCCTCGCCGCTGCCGGGCCCCTaGGCGGTGATGTGGTCCCTCTCGATGTGGCTCAGCAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: SGLPFSTQASPLPGP*AVMWSLSMWLSSDS
Trigger: GGAGTCGCTGCTGAGCCACATCGAGAGGGACCACATCACCGCGCAGGGGCCCGGCAGCGGCGAGGCCTGCGTGGAGAACGGCAAGCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 90 bp TTGGCCAGGGGCCCCTGTGTGGCCGCGCCATGTGGCTCCTGGCCGTaGCAAGGTTTGGTCTGTCGATACCCGTCAGGGCCGGGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: LARGPCVAAPCGSWP*QGLVCRYPSGPGAH
Trigger: GTGGGCGCCCGGCCCTGACGGGTATCGACAGACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGCCCCTGGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp GCCCCTGTGTGGCCGCGCCATGTGGCTCCTGGCCGTGACAAGGTTTaGTCTGTCGATACCCGTCAGGGCCGGGCGCCCACAGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: APVWPRHVAPGRDKV*SVDTRQGRAPTERR
Trigger: CCTGCGCTCTGTGGGCGCCCGGCCCTGACGGGTATCGACAGACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp GGCCTCTCTGTTGCGATCCATCCGAAGGACGGGCGCGGCCGGTGGTaGCGGCACAGCTTTCTGTCGCGCGGGCTGCAGGGACCGTCCTAT +
Preference number: 5 (lower is better)
Translates to: GLSVAIHPKDGRGRW*RHSFLSRGLQGPSY
Trigger: ATAGGACGGTCCCTGCAGCCCGCGCGACAGAAAGCTGTGCCGCCACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAACAGAGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS CCA 90 bp GGCCCCTGCGCGGCTGGTGCATCCTGCTCACGCTTGCGCTTCTCCTaGCTCACCAGGACGTACTCGCGCCTGTCCTTGTCGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: GPCAAGASCSRLRFS*LTRTYSRLSLSKAT
Trigger: CGTGGCCTTCGACAAGGACAGGCGCGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp CTCCTGCCTGGGCTTGGCCAGGGGCCCCTGTGTGGCCGCGCCATGTaGCTCCTGGCCGTGACAAGGTTTGGTCTGTCGATACCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LLPGLGQGPLCGRAM*LLAVTRFGLSIPVR
Trigger: CCTGACGGGTATCGACAGACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGCCCCTGGCCAAGCCCAGGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCAGAGGCCGACCAGAGTaGCCAGCCTGGAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGRGRPE*PAWRGT
Trigger: GGTGCCTCTCCAGGCTGGCAACTCTGGTCGGCCTCT...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp GGTGCACGTGCAGCTCCAGGTCCTTCTTACGCTCGAACTGGCTCTTaGAGAAGGAGCACTGGACCGCTGCCTTGGCCTCCCCCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: GARAAPGPSYARTGS*RRSTGPLPWPPPGR
Trigger: GCGCCCCGGGGGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGCACTGGACCGCTGCCTaGGCCTCCCCCGGGGCGCAT +
Preference number: 5 (lower is better)
Translates to: QSLLTWEAPVTVLSLATLHWTAA*ASPGAH
Trigger: ATGCGCCCCGGGGGAGGCCAAGGCAGCGGTCCAGTG...CAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACGCCACCGGCTCCTGTTaGATGGAGTGTAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDATGSC*MECRTG
Trigger: CCCCGTCCTACACTCCATCAAACAGGAGCCGGTGGC...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp GTCCCCGTCACTGTCCCTCTCGCGGCGCGCGCGGCGATGCACGCGTaGGTGCAGCACCATCTGATGATAGGTGCGGAAGATCTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: VPVTVPLAARAAMHA*VQHHLMIGAEDLAA
Trigger: TGCGGCAAGATCTTCCGCACCTATCATCAGATGGTGCTGCACTCACGCGTGCATCGCCGCGCGCGCCGCGAGAGGGACAGTGACGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp ACGGGCGCGGCCGGTGGTGGCGGCACAGCTTTCTGTCGCGCGGGCTaGAGGGACCGTCCTATCTCTCCATGGTCAGAAGAGCCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: TGAAGGGGTAFCRAG*RDRPISPWSEEPKD
Trigger: GTCTTTTGGCTCTTCTGACCATGGAGAGATAGGACGGTCCCTGCAGCCCGCGCGACAGAAAGCTGTGCCGCCACCACCGGCCGCGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 90 bp GCGCCTCGCCCGCCTCCGGCTCGTGTCCCTGAATCAGAGTCCCCGTaGGGTGGCTCCGGATGTGAATCTTCAGGTTGCCCTTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: APRPPPARVPESESP*GGSGCESSGCPSGK
Trigger: CTTCCCAGAAGGGCAACCTGAAGATTCACATCCGGAGCCACCGCACGGGGACTCTGATTCAGGGACACGAGCCGGAGGCGGGCGAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp GGGCTGGTGGAAGCTCTTTCCGCACTCGATGCAGACGAACTCTCCTaGCCGGGCCTGCGTCCGGAGTGTCCCTCTGTGCTCCAACCCAGG +
Preference number: 5 (lower is better)
Translates to: GLVEALSALDADELS*PGLRPECPSVLQPR
Trigger: CCTGGGTTGGAGCACAGAGGGACACTCCGGACGCAGGCCCGGCCAGGAGAGTTCGTCTGCATCGAGTGCGGAAAGAGCTTCCACCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGGGGCTCAGCTCGGGCTaGCCGTTCTCCACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSGCEVSAQEFPGCSSMEGLSSG*PFSTQA
Trigger: GGCCTGCGTGGAGAACGGCAAGCCCGAGCTGAGCCC...CTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGGACTCCTGGACCACGTTGTaGATGGTGGCGATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PRLFFHGAARSQVGGCWDSWTTL*MVAMGS
Trigger: GGACCCCATCGCCACCATCAACAACGTGGTCCAGGA...GTCCCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTCCCAGGCCCCGTACTaGAGGTACTCGGCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: RLLGHREGTANGRYGDLGSQAPY*RYSAGS
Trigger: CGAGCCGGCCGAGTACCTCAAGTACGGGGCCTGGGA...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACGGGGGAGCCACGGAGTaGCAGCTGACGCGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: HREGTANGRYGDLGCVGNGGATE*QLTRCQ
Trigger: CTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCC...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCGGGGCAGGCACCGGTTaGGAGCTAGCCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RDVRCLLRSSPAVLPWSGGAGTG*ELASCL
Trigger: CAGGCAGGAGGCTAGCTCCAAACCGGTGCCTGCCCC...GCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCGGGCACTGTGCTTATTaGTGGGGGCAAAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PLQRSGSGCEVSAQEFPGGHCAY*WGQSQP
Trigger: GGGCTGGCTTTGCCCCCACAAATAAGCACAGTGCCC...GCCGGGGAACTCCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTCGCCCCCTTCGCCCTTaGCAGGAGGTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPRPLRP*QEVDPE
Trigger: CTCAGGGTCCACCTCCTGCAAAGGGCGAAGGGGGCG...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCCGCCCCCTTCGCCCTTaGCAGGAGGTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLGHREGTANGRYGDLGCRPLRP*QEVDPE
Trigger: CTCAGGGTCCACCTCCTGCAAAGGGCGAAGGGGGCG...GCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp TGCGCCTGGTGCACGTGCAGCTCCAGGTCCTTCTTACGCTCGAACTaGCTCTTGCAGAAGGAGCACTGGACCGCTGCCTTGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: CAWCTCSSRSFLRSN*LLQKEHWTAALASP
Trigger: GGGGGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACAGGTGGGAGGCTGCTGGCGGTGCCAGATGCGTTaGTGCATCCACAGGACCTCG +
Preference number: 5 (lower is better)
Translates to: VPRLFFHGAARSQVGGCWRCQMR*CIHRTS
Trigger: CGAGGTCCTGTGGATGCACAAACGCATCTGGCACCG...CCAGCAGCCTCCCACCTGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTTCCACAGGCTTGCTATaGGCCGAGGGCTGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPSTGLL*AEGCAP
Trigger: TGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGGA...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp GGGCCTGCGTCCGGAGTGTCCCTCTGTGCTCCAACCCAGGGCCGCTaGCACCCCATCCCTGGTAGAGGGTCGCAAAGTCCTTTGGAATGT +
Preference number: 5 (lower is better)
Translates to: GPASGVSLCAPTQGR*HPIPGRGSQSPLEC
Trigger: ACATTCCAAAGGACTTTGCGACCCTCTACCAGGGATGGGGTGTCAGCGGCCCTGGGTTGGAGCACAGAGGGACACTCCGGACGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp GCCCATCGGACTCAAACACCACTGAGTGTGCCCGCATGTGGGCCCTaGGGTGGCCGGGCTGGTGGAAGCTCTTTCCGCACTCGATGCAGA +
Preference number: 5 (lower is better)
Translates to: AHRTQTPLSVPACGP*GGRAGGSSFRTRCR
Trigger: TCTGCATCGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACCTCAGGGCCCACATGCGGGCACACTCAGTGGTGTTTGAGTCCGATGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp ACAGCTTTTCTGCAGGGTGACCCGTCTGGCCCTCCGCTCCCGTACTaGAAGGGAACTCCACACCATCACCAGGGACGGGCACCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: TAFLQGDPSGPPLPY*KGTPHHHQGRAPPA
Trigger: AGCAGGAGGTGCCCGTCCCTGGTGATGGTGTGGAGTTCCCTTCCAGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACGCCTCTCTCAGATTCTaGGCAGGGAGGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANASLRF*AGRRRA
Trigger: GGCCCGCCGCCTCCCTGCCAAGAATCTGAGAGAGGC...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGGCTGCGATCCCTGCCTaGGACTCGCCGGTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: RLLGHREGTANGRYGDLGAAIPA*DSPVSL
Trigger: AAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAGC...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAATTGGGCGGGTGGCCCTaGGTCACTCCCACAGGCACG +
Preference number: 5 (lower is better)
Translates to: RMEQAHGPREECDGASEQLGGWP*VTPTGT
Trigger: CGTGCCTGTGGGAGTGACCAAGGGCCACCCGCCCAA...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 90 bp AGAGGCTCAGGCCGGCGACGATCACCTCCTCCTGGACCACGTTGTTaGTGGTGGCGATGGGGTCCAGCTCACTCTTGGGCCTGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RGSGRRRSPPPGPRC*WWRWGPAHSWACSC
Trigger: GCAAGAACAGGCCCAAGAGTGAGCTGGACCCCATCGCCACCATCAACAACGTGGTCCAGGAGGAGGTGATCGTCGCCGGCCTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp GCACGCGTGAGTGCAGCACCATCTGATGATAGGTGCGGAAGATCTTaGCGCACTCGAAGCACTCGGAGGACTTGCCCTGGCCGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ARVSAAPSDDRCGRS*RTRSTRRTCPGRWW
Trigger: CCACCACCGGCCAGGGCAAGTCCTCCGAGTGCTTCGAGTGCGGCAAGATCTTCCGCACCTATCATCAGATGGTGCTGCACTCACGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp TCGGACTCAAACACCACTGAGTGTGCCCGCATGTGGGCCCTGAGGTaGCCGGGCTGGTGGAAGCTCTTTCCGCACTCGATGCAGACGAAC +
Preference number: 5 (lower is better)
Translates to: SDSNTTECARMWALR*PGWWKLFPHSMQTN
Trigger: GTTCGTCTGCATCGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACCTCAGGGCCCACATGCGGGCACACTCAGTGGTGTTTGAGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGCGCTCGAACTGGCTCTaGCAGAAGGAGCACTGGACC +
Preference number: 5 (lower is better)
Translates to: RLLGHREGTANGRYGDLGRSNWL*QKEHWT
Trigger: GGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCG...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCTGCACTTGAACGGCTaGTGCGCCTGGTGCACGTGC +
Preference number: 5 (lower is better)
Translates to: HREGTANGRYGDLGCVGNLHLNG*CAWCTC
Trigger: GCACGTGCACCAGGCGCACAAGCCGTTCAAGTGCAG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCAGGTCACACTGCACAGCCTGCACTaGAACGGCTTGTGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: RCLLRSSPAVLPWSGQVTLHSLH*NGLCAW
Trigger: CCAGGCGCACAAGCCGTTCAAGTGCAGGCTGTGCAG...TGTGACCTGGCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCCTGCAGCCTGAAGGAGTGTGAGACGATGAAACCCACATGTGCCGGAGCCCCTGGGTCCAGCTCACTCTaGGGCCTGTTCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PCSLKECETMKPTCAGAPGSSSL*GLFLLP
Trigger: GGGCAGCAAGAACAGGCCCAAGAGTGAGCTGGACCC...AGGGGCTCCGGCACATGTGGGTTTCATCGTCTCACACTCCTTCAGGCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGTCCTCCTGGACCACGTaGTTGATGGTGGCGATGGGG +
Preference number: 5 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRSSWTT*LMVAMG
Trigger: CCCCATCGCCACCATCAACAACGTGGTCCAGGAGGA...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGGGGGGAGCCACGGAGTaGCAGCTGACGCGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVGGATE*QLTRCQ
Trigger: CTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCC...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGGGCACTGTGCTTATTaGTGGGGGCAAAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WDIVRVLLMAVTGTWGASGHCAY*WGQSQP
Trigger: GGGCTGGCTTTGCCCCCACAAATAAGCACAGTGCCC...CGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp TGTAACCATTGGGCTGAATCCACGGGGGAGCCACGGAGTTGCAGCTaGCGCGGTGCCAGATGCGTTTGTGCATCCACAGGACCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: CNHWAESTGEPRSCS*RGARCVCASTGPRG
Trigger: ACCCCGAGGTCCTGTGGATGCACAAACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCCGTGGATTCAGCCCAATGGTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp ACAGCTTTCTGTCGCGCGGGCTGCAGGGACCGTCCTATCTCTCCATaGTCAGAAGAGCCAAAAGACGTGCCTGCTCCCAGGAGGTGCACC +
Preference number: 5 (lower is better)
Translates to: TAFCRAGCRDRPISP*SEEPKDVPAPRRCT
Trigger: GGTGCACCTCCTGGGAGCAGGCACGTCTTTTGGCTCTTCTGACCATGGAGAGATAGGACGGTCCCTGCAGCCCGCGCGACAGAAAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS CCA 90 bp TACCCGTCAGGGCCGGGCGCCCACAGAGCGCAGGGACCTCCGGAATaGCTCTCCTTATTCTTAGGCATGCTAGCGGCTTTTGTGACCACT +
Preference number: 5 (lower is better)
Translates to: YPSGPGAHRAQGPPE*LSLFLGMLAAFVTT
Trigger: AGTGGTCACAAAAGCCGCTAGCATGCCTAAGAATAAGGAGAGCCATTCCGGAGGTCCCTGCGCTCTGTGGGCGCCCGGCCCTGACGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAACACGCTGCGATCCCTGCCTaGGACTCGCCGGTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LNMGGPCDSAQPRHSVQHAAIPA*DSPVSL
Trigger: AAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAGC...GTGTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGCGGTGCCAGATGCGTTaGTGCATCCACAGGACCTCG +
Preference number: 5 (lower is better)
Translates to: CLQFPLQRSGSGCEVSAQRCQMR*CIHRTS
Trigger: CGAGGTCCTGTGGATGCACAAACGCATCTGGCACCG...CTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTAACTTCTCCACAGGCTaGCTATTGGCCGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: EGTANGRYGDLGCVGNTPNFSTG*LLAEGC
Trigger: GCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGTT...AGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp CGCCCCCTTCGCCCTTTGCAGGAGGTGGACCCTGAGGCTGAGCACTaGATTTGGCTTTCAGGGAGTCCGGGGCACTGTGCTTATTTGTGG +
Preference number: 5 (lower is better)
Translates to: RPLRPLQEVDPEAEH*IWLSGSPGHCAYLW
Trigger: CCACAAATAAGCACAGTGCCCCGGACTCCCTGAAAGCCAAATTCAGTGCTCAGCCTCAGGGTCCACCTCCTGCAAAGGGCGAAGGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 90 bp CCCTCCCCCAGAGTGTTCCTTGTTGTGCAAATCGGACAGCTTTTCTaGAGGGTGACCCGTCTGGCCCTCCGCTCCCGTACTGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: PSPRVFLVVQIGQLF*RVTRLALRSRTGRE
Trigger: TTCCCTTCCAGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGATTTGCACAACAAGGAACACTCTGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 90 bp GGTGAACGACTAAAGCCGCCTGCAGGGAGGAGGCCGTCTCCTTATTaGTGGGGTCATCCCGCGTCGACCTCGCACTTAAATCTAGCGGCA +
Preference number: 5 (lower is better)
Translates to: GERLKPPAGRRPSPY*WGHPASTSHLNLAA
Trigger: TGCCGCTAGATTTAAGTGCGAGGTCGACGCGGGATGACCCCAGCAATAAGGAGACGGCCTCCTCCCTGCAGGCGGCTTTAGTCGTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACCTCTTGGGCCTGTTCTaGCTGCCCGTCTTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHLLGLF*LPVLGP
Trigger: CGGCCCCAAGACGGGCAGCAAGAACAGGCCCAAGAG...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGTACTCGCGCCTGTCCTaGTCGAAGGCCACGTCCCCG +
Preference number: 5 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVYSRLS*SKATSP
Trigger: CGGGGACGTGGCCTTCGACAAGGACAGGCGCGAGTA...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 90 bp TGCGTTTGTGCATCCACAGGACCTCGGGGTAGTAGGTCTTGTGGCTaGAGTAAGGACACGGGTGAACGACTAAAGCCGCCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CVCASTGPRGSRSCG*SKDTGERLKPPAGR
Trigger: CCTCCCTGCAGGCGGCTTTAGTCGTTCACCCGTGTCCTTACTGCAGCCACAAGACCTACTACCCCGAGGTCCTGTGGATGCACAAACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp AAGAGCCAAAAGACGTGCCTGCTCCCAGGAGGTGCACCTTCTACATaGGGGGCGCAGCAGCTGGCAGCCAGCACCTTCAATCAAGATTCG +
Preference number: 5 (lower is better)
Translates to: KSQKTCLLPGGAPST*GAQQLAASTFNQDS
Trigger: CGAATCTTGATTGAAGGTGCTGGCTGCCAGCTGCTGCGCCCCCCATGTAGAAGGTGCACCTCCTGGGAGCAGGCACGTCTTTTGGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532857.1
CDS-3UTR CAA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGGTGTGGCAGGTAGCCTaGTCCCCATCCACCTCGTGG +
Preference number: 5 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAVWQVA*SPSTSW
Trigger: CCACGAGGTGGATGGGGACAAGGCTACCTGCCACAC...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGCCAGAGTGTTCCTTGTaGTGCAAATCGGACAGCTTT +
Preference number: 5 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGPECSL*CKSDSF
Trigger: AAAGCTGTCCGATTTGCACAACAAGGAACACTCTGG...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAAAACTTCTCCACAGGCTaGCTATTGGCCGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RMEQAHGPREECDGASEQNFSTG*LLAEGC
Trigger: GCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGTT...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CCCAGTCTGTTTAACTGGGTGAAAACCTTCCTCCTGCACTCTGTGCACCCTGCGGCCACCGGCTCCTGTTaGATGGAGTGTAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: PSLFNWVKTFLLHSVHPAATGSC*MECRTG
Trigger: CCCCGTCCTACACTCCATCAAACAGGAGCCGGTGGC...CGCAGGGTGCACAGAGTGCAGGAGGAAGGTTTTCACCCAGTTAAACAGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGAATAAGACAGATGCCTaGTGCCCCTACTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRNKTDA*CPYCAC
Trigger: GCAGGCACAGTAGGGGCACAAGGCATCTGTCTTATT...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GGTGTTCTCACACCCTCAGCGACCTGTGCACAGTGGCCGGATCAGGGGTGGGGGGTATGCAACTCCCAATaGCTACTTCCTGAAGCACCT +
Preference number: 5 (lower is better)
Translates to: GVLTPSATCAQWPDQGWGVCNSQ*LLPEAP
Trigger: AGGTGCTTCAGGAAGTAGCAATTGGGAGTTGCATAC...CCCCCACCCCTGATCCGGCCACTGTGCACAGGTCGCTGAGGGTGTGAGAACACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 90 bp CCAGAGTGTTCCTTGTTGTGCAAATCGGACAGCTTTTCTGCAGGGTaGCCCGTCTGGCCCTCCGCTCCCGTACTGGAAGGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: PECSLLCKSDSFSAG*PVWPSAPVLEGNST
Trigger: TGTGGAGTTCCCTTCCAGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGATTTGCACAACAAGGAACACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCAAGCACTCGGAGGACTaGCCCTGGCCGGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SERLTRRGICLQFPLQRSKHSED*PWPVVA
Trigger: AGCCACCACCGGCCAGGGCAAGTCCTCCGAGTGCTT...GCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAACACCCCCCAGAGTGTTCCTaGTTGTGCAAATCGGACAGC +
Preference number: 5 (lower is better)
Translates to: LNMGGPCDSAQPRHSVQHPPECS*LCKSDS
Trigger: GCTGTCCGATTTGCACAACAAGGAACACTCTGGGGG...GTGTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACACGCCTTTAGGTTCCAATAAGACAGATGCCTaGTGCCCCTACTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ANGRYGDLGCVGNTPLGSNKTDA*CPYCAC
Trigger: GCAGGCACAGTAGGGGCACAAGGCATCTGTCTTATT...GGAACCTAAAGGCGTGTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617840.1
CDS TCA 90 bp TTGGACTCGCCGGTGTCTCTTTCCGAGGCGTTATCTCCCATCTTGTaGCTCTGGTCTCCACTGGAGAGCTCGGTCGAAGTCACCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LDSPVSLSEALSPIL*LWSPLESSVEVTSS
Trigger: CGAAGAGGTGACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTCACAAGATGGGAGATAACGCCTCGGAAAGAGACACCGGCGAGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 90 bp GGAATGTACGTCTTAAAGATGTTGAGGATGTCCAGGCGCTTCTCATaGCCCTCGGCCACCGGCTCCTGTTTGATGGAGTGTAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: GMYVLKMLRMSRRFS*PSATGSCLMECRTG
Trigger: CCCCGTCCTACACTCCATCAAACAGGAGCCGGTGGCCGAGGGGCATGAGAAGCGCCTGGACATCCTCAACATCTTTAAGACGTACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp CTCTTTCCGAGGCGTTATCTCCCATCTTGTGACTCTGGTCTCCACTaGAGAGCTCGGTCGAAGTCACCTCTTCGGAAAAGCAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LFPRRYLPSCDSGLH*RARSKSPLRKSSSG
Trigger: GCCGCTGCTGCTTTTCCGAAGAGGTGACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTCACAAGATGGGAGATAACGCCTCGGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CGGGATGTGAGGTGTCTGCTCAGGAGTTCCCCGGCTGTTCTTCCATGGAGCGGCCCAGAGTGTTCCTTGTaGTGCAAATCGGACAGCTTT +
Preference number: 5 (lower is better)
Translates to: RDVRCLLRSSPAVLPWSGPECSL*CKSDSF
Trigger: AAAGCTGTCCGATTTGCACAACAAGGAACACTCTGG...GCCGCTCCATGGAAGAACAGCCGGGGAACTCCTGAGCAGACACCTCACATCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp CATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGTGCGTCGGAAACCTCATCAGTAAACCATaGCAAACCACAGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: HREGTANGRYGDLGCVGNLISKP*QTTVPA
Trigger: GGCTGGCACTGTGGTTTGCAATGGTTTACTGATGAG...GTTTCCGACGCACCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCATCTCGGCCTCTCTGTaGCGATCCATCCGAAGGACG +
Preference number: 5 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGISASL*RSIRRT
Trigger: CGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGAT...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGGGGCTACACCCACTTTCTTaGATCCAGAAAGCATCCCTA +
Preference number: 5 (lower is better)
Translates to: RLLGHREGTANGRYGDLGLHPLS*IQKASL
Trigger: TAGGGATGCTTTCTGGATCAAAGAAAGTGGGTGTAG...CCCCAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGTTGAAGGAAGGAATGTaGGTAGACAGTCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ASAFSFHSSAAARDVRCLLKEGM*VDSLQP
Trigger: TGGCTGGAGACTGTCTACCAACATTCCTTCCTTCAA...CAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 90 bp AGGGCCGCTGACACCCCATCCCTGGTAGAGGGTCGCAAAGTCCTTTaGAATGTACGTCTTAAAGATGTTGAGGATGTCCAGGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RAADTPSLVEGRKVL*NVRLKDVEDVQALL
Trigger: GAGAAGCGCCTGGACATCCTCAACATCTTTAAGACGTACATTCCAAAGGACTTTGCGACCCTCTACCAGGGATGGGGTGTCAGCGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCATGGAAGGGGAAGCTCTaGCCGCAGATGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQAWKGKL*PQMQQV
Trigger: CACCTGCTGCATCTGCGGCAAGAGCTTCCCCTTCCA...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TACTCGATCAACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCTGGAGGAAGAACTGCTaGGTGTCCGAGGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: YSINLKSTTSCSDIIPTVWRKNC*VSEGPS
Trigger: GGAGGGGCCCTCGGACACCAAGCAGTTCTTCCTCCA...GACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTTGATCGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACTACGTCTTAAAGATGTaGAGGATGTCCAGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANYVLKM*RMSRRF
Trigger: GAAGCGCCTGGACATCCTCAACATCTTTAAGACGTA...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AGAATGGAACAGGCACACGGCCCCAGGGAGGAGTGCGATGGAGCCAGTGAACAATACGTCTTAAAGATGTaGAGGATGTCCAGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: RMEQAHGPREECDGASEQYVLKM*RMSRRF
Trigger: GAAGCGCCTGGACATCCTCAACATCTTTAAGACGTA...TTGTTCACTGGCTCCATCGCACTCCTCCCTGGGGCCGTGTGCCTGTTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCACAGAATGGTCTCTCCCTaGTTTGGGGGCGTCTGCGGA +
Preference number: 5 (lower is better)
Translates to: VSFARFAQFEWWEEWNRHRMVSP*FGGVCG
Trigger: TCCGCAGACGCCCCCAAACAAGGGAGAGACCATTCT...GTGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCTGCTCAGGTCCTTTGTAAGCAGTTaGCAGAATGTAGCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: AFSFHSSAAARDVRCLLRSFVSS*QNVALL
Trigger: TAACAGGGCTACATTCTGCAAACTGCTTACAAAGGA...CCTGAGCAGACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCAGAAAAGACACCCACTaGCTGGGGTGGCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: STTSCSDIIPTVPLNMGGRKDTH*LGWLRE
Trigger: TTCCCTGAGCCACCCCAGCAAGTGGGTGTCTTTTCT...GCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp GAGGCATCTGCCTTCAGTTTCCACTCCAGCGCAGCGGCTCGGGATGTGAGGTGTCGCCACCCTCTGAAATaGGGGAAAAATGTCTTACAA +
Preference number: 5 (lower is better)
Translates to: EASAFSFHSSAAARDVRCRHPLK*GKNVLQ
Trigger: TTGTAAGACATTTTTCCCCAATTTCAGAGGGTGGCG...ACACCTCACATCCCGAGCCGCTGCGCTGGAGTGGAAACTGAAGGCAGATGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 90 bp GGGAACTCCACACCATCACCAGGGACGGGCACCTCCTGCTTGGGGTaGAATGCTGGCATCTTTAAGTCCATAGAAAATCTGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GNSTPSPGTGTSCLG*NAGIFKSIENLCCS
Trigger: AGAGCAGCACAGATTTTCTATGGACTTAAAGATGCCAGCATTTCACCCCAAGCAGGAGGTGCCCGTCCCTGGTGATGGTGTGGAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 90 bp TGGCAGCCAGCACCTTCAATCAAGATTCGAAACTGCATGGCAGGCTaGCGGGGGCAATGCCTTTCTGCTGTATGTGTAAGTAGGATCCCC +
Preference number: 5 (lower is better)
Translates to: WQPAPSIKIRNCMAG*RGQCLSAVCVSRIP
Trigger: GGGGATCCTACTTACACATACAGCAGAAAGGCATTGCCCCCGTCAGCCTGCCATGCAGTTTCGAATCTTGATTGAAGGTGCTGGCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532857.1
CDS-3UTR CAA 90 bp GGGAGGCTGCTGGGACATCGTGAGGGTACTGCTAATGGCCGTTACGGGGACCTGTGTCTCAAACTTGTCTaGAATAAGACAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: GRLLGHREGTANGRYGDLCLKLV*NKTDAL
Trigger: CAAGGCATCTGTCTTATTCAAGACAAGTTTGAGACA...CAGGTCCCCGTAACGGCCATTAGCAGTACCCTCACGATGTCCCAGCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp AACAATGAGGGTCTCATCATCATACCCCTCCGCCAAGCCTGCTTCCCACAGCACGTGGCAGAGGAGGGTTaGTCTAGTTTGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NNEGLIIIPLRQACFPQHVAEEG*SSLKEG
Trigger: TCCTTCCTTCAAACTAGACAAACCCTCCTCTGCCAC...GTGCTGTGGGAAGCAGGCTTGGCGGAGGGGTATGATGATGAGACCCTCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTTCCACAGGCTTGCTATaGGCCGAGGGCTGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRSTGLL*AEGCAP
Trigger: TGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGGA...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GAGCCTCCAGGATGGAGCCTCACCAGCAAGACACTTCCAGCTCCAAAGGCCAACCATCGTTTGAAAGTGTaGCAAAGTAACCTGAACCGT +
Preference number: 5 (lower is better)
Translates to: EPPGWSLTSKTLPAPKANHRLKV*QSNLNR
Trigger: ACGGTTCAGGTTACTTTGCAACACTTTCAAACGATG...GTTGGCCTTTGGAGCTGGAAGTGTCTTGCTGGTGAGGCTCCATCCTGGAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CTTAACATGGGAGGCCCCTGTGACAGTGCTCAGCCTCGCCACTCTGTCCAACACGAGGGTTTGTCTAGTTaGAAGGAAGGAATGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LNMGGPCDSAQPRHSVQHEGLSS*KEGMLV
Trigger: TACCAACATTCCTTCCTTCAAACTAGACAAACCCTC...GTGTTGGACAGAGTGGCGAGGCTGAGCACTGTCACAGGGGCCTCCCATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AACCTCAAATCCACCACGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACCCCCCAGAGTGTTCCTaGTTGTGCAAATCGGACAGC +
Preference number: 5 (lower is better)
Translates to: NLKSTTSCSDIIPTVPLNPPECS*LCKSDS
Trigger: GCTGTCCGATTTGCACAACAAGGAACACTCTGGGGG...GTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACGTGGTGGATTTGAGGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GTGCCCCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTGAGGCCGTCTCCTTATaGCTGGGGTCATCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: VPLLCLPVLLFIIRKYGTEAVSL*LGSSRV
Trigger: GACGCGGGATGACCCCAGCAATAAGGAGACGGCCTC...AGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCAGGGGCAGGCACCGGTTaGGAGCTAGCCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSFISERLTRRGICLQFPGAGTG*ELASCL
Trigger: CAGGCAGGAGGCTAGCTCCAAACCGGTGCCTGCCCC...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TGTCTCCTTTGCCAGATTCGCTCAGTTCGAATGGTGGGAAGAATGGAACAGGCAACAGACGTGTCTCCTTaGCCAGATTCGCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: CLLCQIRSVRMVGRMEQATDVSP*PDSLSS
Trigger: CGAACTGAGCGAATCTGGCAAAGGAGACACGTCTGT...TGCCTGTTCCATTCTTCCCACCATTCGAACTGAGCGAATCTGGCAAAGGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 90 bp TCCTGGGAATGTGGAAATGCAATGACAACGCTCCCAGTTGGATGCTaGTACTCTCAGCTAAAAGTGTTCAGAGAAGGACCGAACTCCACT +
Preference number: 5 (lower is better)
Translates to: SWECGNAMTTLPVGC*YSQLKVFREGPNST
Trigger: AGTGGAGTTCGGTCCTTCTCTGAACACTTTTAGCTGAGAGTACCAGCATCCAACTGGGAGCGTTGTCATTGCATTTCCACATTCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCAGAGGCCGTCTCCTTATaGCTGGGGTCATCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: SSFISERLTRRGICLQFPEAVSL*LGSSRV
Trigger: GACGCGGGATGACCCCAGCAATAAGGAGACGGCCTC...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp TCTTCATTTATTTCTGAACGTTTAACAAGGAGAGGCATCTGCCTTCAGTTTCCATGGTCTCTCCCTTGTTaGGGGGCGTCTGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSFISERLTRRGICLQFPWSLPC*GASAEV
Trigger: CACCTCCGCAGACGCCCCCAAACAAGGGAGAGACCA...TGGAAACTGAAGGCAGATGCCTCTCCTTGTTAAACGTTCAGAAATAAATGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TGTGTGTGTTTGTGTGTGTGTGTGTCTGTGTTTAAACAAGACTTTGTATCAGAATTCTTGCTGCCCGTCTaGGGGCCGTGCGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: CVCLCVCVSVFKQDFVSEFLLPV*GPCAFM
Trigger: CATGAAGGCGCACGGCCCCAAGACGGGCAGCAAGAA...TTCTGATACAAAGTCTTGTTTAAACACAGACACACACACACACAAACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGACTGCGGTGGATGGCATaGTGGGCGTTCAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGLRWMA*WAFKLS
Trigger: GGACAGCTTGAACGCCCACAATGCCATCCACCGCAG...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGGTATTAAGTAAACTGTaGCTCTCGCCAGTATTAAAG +
Preference number: 5 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVVLSKL*LSPVLK
Trigger: CTTTAATACTGGCGAGAGCAACAGTTTACTTAATAC...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CGTCTTGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGCACTTTCGTGTCACTTaGGGTACAGAATTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: RLVLTSSPQSLLTWEAPVHFRVT*GTEFLF
Trigger: AAAAAGAAATTCTGTACCCAAAGTGACACGAAAGTG...CACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACAAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp TGTTCTGACATCATCCCCACAGTCCCTCTTAACATGGGAGGCCCCTGTGACAGTTTAGCTGTGTGTTATTaGAACGCAAAAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: CSDIIPTVPLNMGGPCDSLAVCY*NAKMRK
Trigger: CTTCCTCATTTTTGCGTTCAAATAACACACAGCTAA...ACTGTCACAGGGGCCTCCCATGTTAAGAGGGACTGTGGGGATGATGTCAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGAACAGACGTGTCTCCTTaGCCAGATTCGCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGTDVSP*PDSLSS
Trigger: CGAACTGAGCGAATCTGGCAAAGGAGACACGTCTGT...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GTCTCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTTGTTTGAAACCTCTGAGAATTaGCTGGGGGTGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: VSATLPKITLQNSQLQLFETSEN*LGVAEE
Trigger: CTCCTCTGCCACCCCCAGCAAATTCTCAGAGGTTTC...AAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTGGAATACCATTTCAATaGCGTACACTGCATGGTTTA +
Preference number: 5 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRGIPFQ*RTLHGL
Trigger: TAAACCATGCAGTGTACGCAATTGAAATGGTATTCC...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp AAGACAAGGAGAGGCAGTAGTATTAATACTCGATCAACCTCAAATCCACCACGTAAAATTCACCTGGCTTaGAAGCCAAATCTGTATGGT +
Preference number: 5 (lower is better)
Translates to: KTRRGSSINTRSTSNPPRKIHLA*KPNLYG
Trigger: ACCATACAGATTTGGCTTCAAAGCCAGGTGAATTTT...ACGTGGTGGATTTGAGGTTGATCGAGTATTAATACTACTGCCTCTCCTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS-3UTR CAA 90 bp CCTACTGTGCCTGCCAGTACTACTGTTTATTATAAGAAAATATGGGACTATGGATGTCTCAAACTTGTCTaGAATAAGACAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: PTVPASTTVYYKKIWDYGCLKLV*NKTDAL
Trigger: CAAGGCATCTGTCTTATTCAAGACAAGTTTGAGACA...TCCATAGTCCCATATTTTCTTATAATAAACAGTAGTACTGGCAGGCACAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS-3UTR CAA 90 bp GTCTCCGCAACTTTGCCCAAAATAACTTTACAGAACAGTCAATTACAGTTGTTTGTTACATTGCATCGTTaGAAAGTGTTGCAAAGTAAC +
Preference number: 5 (lower is better)
Translates to: VSATLPKITLQNSQLQLFVTLHR*KVLQSN
Trigger: GTTACTTTGCAACACTTTCAAACGATGCAATGTAAC...AAACAACTGTAATTGACTGTTCTGTAAAGTTATTTTGGGCAAAGTTGCGGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp TTGACCGGGTCCAGCTCAGCCACCCGCCGTCCGGCCTaGGTGCCAGGGCACGAGTCGCCGGCCGCCGACGGC +
Preference number: 6 (lower is better)
Translates to: LTGSSSATRRPA*VPGHESPAADG
Trigger: GCCGTCGGCGGCCGGCGACTCGTGCCCTGGCACGCAGGCCGGACGGCGGGTGGCTGAGCTGGACCCGGTCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 90 bp GCCTGCGAGGCCCCGTTCAGCAGCCGGTTGCAGGCCGAGGCGCTCTaGGTGGGGCTGGCGCAGGCGTCCAGGCCCTCGGAGGCGCGCATC +
Preference number: 6 (lower is better)
Translates to: ACEAPFSSRLQAEAL*VGLAQASRPSEARI
Trigger: GATGCGCGCCTCCGAGGGCCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 90 bp AGGACCCTGGCGCCGTCGGCCTGCGAGGCCCCGTTCAGCAGCCGGTaGCAGGCCGAGGCGCTCTTGGTGGGGCTGGCGCAGGCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RTLAPSACEAPFSSR*QAEALLVGLAQASR
Trigger: CCTGGACGCCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGCCGACGGCGCCAGGGTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CGCCGTCGGCCTGCGAGGCCCCGTTCAGCAGCCGGTTaGAGGCCGAGGCGCTCTTGGTGGGGCTGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RRRPARPRSAAG*RPRRSWWGWRR
Trigger: CCTGCGCCAGCCCCACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGCCGACGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CCTCGCACGGGAACTCCCCGGGGCTCAGCTCGGGCTTaGCGTTCTCCACGCAGGCCTCGCCGCTGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: PRTGTPRGSARA*RSPRRPRRCRA
Trigger: GGCCCGGCAGCGGCGAGGCCTGCGTGGAGAACGGCAAGCCCGAGCTGAGCCCCGGGGAGTTCCCGTGCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp CGCACTCGAAGCACTCGGAGGACTTGCCCTGGCCGGTaGTGGCTGCGGCCCTGCGGTTGGGGCGCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: RTRSTRRTCPGR*WLRPCGWGARP
Trigger: CGGCCGCGCGCCCCAACCGCAGGGCCGCAGCCACCACCGGCCAGGGCAAGTCCTCCGAGTGCTTCGAGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 72 bp CAGGGCTGCTGGGCTGGGAGGCCGAGTCACCCTCACTaGGTGATCCGCAGCGGGCCCGCGCCGCCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QGCWAGRPSHPH*VIRSGPAPPCP
Trigger: GGGACAGGGCGGCGCGGGCCCGCTGCGGATCACTCAGTGAGGGTGACTCGGCCTCCCAGCCCAGCAGCCCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp CCCGCTCGCGCGCTTCCGCGGGGGCCCCTGCGCGGCTaGTGCATCCTGCTCACGCTTGCGCTTCTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: PARALPRGPLRG*CILLTLALLLA
Trigger: AGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCGCGCGAGCGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp ACTCGAAGCACTCGGAGGACTTGCCCTGGCCGGTGGTaGCTGCGGCCCTGCGGTTGGGGCGCGCGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: TRSTRRTCPGRW*LRPCGWGARPS
Trigger: GCTCGGCCGCGCGCCCCAACCGCAGGGCCGCAGCCACCACCGGCCAGGGCAAGTCCTCCGAGTGCTTCGAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp CCACGCCGGGCTGGGCCTGCAAGGCCGCGTCGCCCCTaGACCCCGCAGCACAGGTGGCCAGAGTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PRRAGPARPRRP*TPQHRWPESSA
Trigger: AGCTGAGGACTCTGGCCACCTGTGCTGCGGGGTCCAGGGGCGACGCGGCCTTGCAGGCCCAGCCCGGCGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CAA 72 bp ACCTCGCACGGGAACTCCCCGGGGCTCAGCTCGGGCTaGCCGTTCTCCACGCAGGCCTCGCCGCTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: TSHGNSPGLSSG*PFSTQASPLPG
Trigger: GCCCGGCAGCGGCGAGGCCTGCGTGGAGAACGGCAAGCCCGAGCTGAGCCCCGGGGAGTTCCCGTGCGAGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp CATCCACCTCGTGGCCCCGGCCGGCCCTGGTGGGGCTaGGGCCTCGCCTCAGCTCCATCTCGGCCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: HPPRGPGRPWWG*GLASAPSRPLC
Trigger: ACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCAGCCCCACCAGGGCCGGCCGGGGCCACGAGGTGGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS TCA 72 bp CCACGCAGGCCTCGCCGCTGCCGGGCCCCTGCGCGGTaGTGTGGTCCCTCTCGATGTGGCTCAGCAGCGACT +
Preference number: 6 (lower is better)
Translates to: PRRPRRCRAPAR*CGPSRCGSAAT
Trigger: AGTCGCTGCTGAGCCACATCGAGAGGGACCACATCACCGCGCAGGGGCCCGGCAGCGGCGAGGCCTGCGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CCGTTCTCCACGCAGGCCTCGCCGCTGCCGGGCCCCTaGGCGGTGATGTGGTCCCTCTCGATGTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PFSTQASPLPGP*AVMWSLSMWLS
Trigger: GCTGAGCCACATCGAGAGGGACCACATCACCGCGCAGGGGCCCGGCAGCGGCGAGGCCTGCGTGGAGAACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CGCTTCCGCGGGGGCCCCTGCGCGGCTGGTGCATCCTaGTCACGCTTGCGCTTCTCCTGGCTCACCAGGACG +
Preference number: 6 (lower is better)
Translates to: RFRGGPCAAGAS*SRLRFSWLTRT
Trigger: CGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 90 bp CTGGTGGGGCTGGGGCCTCGCCTCAGCTCCATCTCGGCCTCTCTGTaGCGATCCATCCGAAGGACGGGCGCGGCCGGTGGTGGCGGCACA +
Preference number: 6 (lower is better)
Translates to: LVGLGPRLSSISASL*RSIRRTGAAGGGGT
Trigger: TGTGCCGCCACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCAGCCCCACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 72 bp CCTCGGCCGGGGCGCGCGTGCGGCTGGCCTCGACTCTaGGGTGGATGGCATTGTGGGCGTTCAAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: PRPGRACGWPRL*GGWHCGRSSCP
Trigger: TGGACAGCTTGAACGCCCACAATGCCATCCACCGCAGAGTCGAGGCCAGCCGCACGCGCGCCCCGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp GGGGCCCCTGCGCGGCTGGTGCATCCTGCTCACGCTTaGGCTTCTCCTGGCTCACCAGGACGTACTCGCGCC +
Preference number: 6 (lower is better)
Translates to: GAPARLVHPAHA*ASPGSPGRTRA
Trigger: GGCGCGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp GTTGCGATCCATCCGAAGGACGGGCGCGGCCGGTGGTaGCGGCACAGCTTTCTGTCGCGCGGGCTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: VAIHPKDGRGRW*RHSFLSRGLQG
Trigger: TCCCTGCAGCCCGCGCGACAGAAAGCTGTGCCGCCACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS CAA 90 bp CGCTTCCGCGGGGGCCCCTGCGCGGCTGGTGCATCCTGCTCACGCTaGCGCTTCTCCTGGCTCACCAGGACGTACTCGCGCCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: RFRGGPCAAGASCSR*RFSWLTRTYSRLSL
Trigger: CAAGGACAGGCGCGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGAGCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp TGGGGCCTCGCCTCAGCTCCATCTCGGCCTCTCTGTTaGGATCCATCCGAAGGACGGGCGCGGCCGGTGGTG +
Preference number: 6 (lower is better)
Translates to: WGLASAPSRPLC*DPSEGRARPVV
Trigger: CACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 72 bp GCCGACGGCCTCAGGTTCAGGCACTGGAGGAAGAACTaGTTGGTGTCCGAGGGCCCCTCCGCCCCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ADGLRFRHWRKN*LVSEGPSAPSS
Trigger: CGAGGAGGGGGCGGAGGGGCCCTCGGACACCAAGCAGTTCTTCCTCCAGTGCCTGAACCTGAGGCCGTCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 72 bp CTGGGGCCTCGCCTCAGCTCCATCTCGGCCTCTCTGTaGCGATCCATCCGAAGGACGGGCGCGGCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: LGPRLSSISASL*RSIRRTGAAGG
Trigger: ACCACCGGCCGCGCCCGTCCTTCGGATGGATCGCAACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS TCA 72 bp GGCCCCTGTGTGGCCGCGCCATGTGGCTCCTGGCCGTaGCAAGGTTTGGTCTGTCGATACCCGTCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: GPCVAAPCGSWP*QGLVCRYPSGP
Trigger: CGGCCCTGACGGGTATCGACAGACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp CCAAACTTCTCCACAGGCTTGCTATTGGCCGAGGGCTaGGCGCCAGCCCGGGCGATGACGGTGGGCGTAGGG +
Preference number: 6 (lower is better)
Translates to: PNFSTGLLLAEG*APARAMTVGVG
Trigger: CCCTACGCCCACCGTCATCGCCCGGGCTGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGTTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp CCGCACTCGATGCAGACGAACTCTCCTGGCCGGGCCTaGGTCCGGAGTGTCCCTCTGTGCTCCAACCCAGGG +
Preference number: 6 (lower is better)
Translates to: PHSMQTNSPGRA*VRSVPLCSNPG
Trigger: CCCTGGGTTGGAGCACAGAGGGACACTCCGGACGCAGGCCCGGCCAGGAGAGTTCGTCTGCATCGAGTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp GGTGGCCGGGCTGGTGGAAGCTCTTTCCGCACTCGATaGAGACGAACTCTCCTGGCCGGGCCTGCGTCCGGA +
Preference number: 6 (lower is better)
Translates to: GGRAGGSSFRTR*RRTLLAGPASG
Trigger: TCCGGACGCAGGCCCGGCCAGGAGAGTTCGTCTGCATCGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp GCCGGGGCGCGCGTGCGGCTGGCCTCGACTCTGCGGTaGATGGCATTGTGGGCGTTCAAGCTGTCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: AGARVRLASTLR*MALWAFKLSRF
Trigger: AAACCTGGACAGCTTGAACGCCCACAATGCCATCCACCGCAGAGTCGAGGCCAGCCGCACGCGCGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp CTGCAGGGTGACCCGTCTGGCCCTCCGCTCCCGTACTaGAAGGGAACTCCACACCATCACCAGGGACGGGCA +
Preference number: 6 (lower is better)
Translates to: LQGDPSGPPLPY*KGTPHHHQGRA
Trigger: TGCCCGTCCCTGGTGATGGTGTGGAGTTCCCTTCCAGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp GGGCTTGGCCAGGGGCCCCTGTGTGGCCGCGCCATGTaGCTCCTGGCCGTGACAAGGTTTGGTCTGTCGATA +
Preference number: 6 (lower is better)
Translates to: GLGQGPLCGRAM*LLAVTRFGLSI
Trigger: TATCGACAGACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGCCCCTGGCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CAA 90 bp TGGTGCACGTGCAGCTCCAGGTCCTTCTTACGCTCGAACTGGCTCTaGCAGAAGGAGCACTGGACCGCTGCCTTGGCCTCCCCCGGGGCG +
Preference number: 6 (lower is better)
Translates to: WCTCSSRSFLRSNWL*QKEHWTAALASPGA
Trigger: CGCCCCGGGGGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp GCCGGTGGTGGCGGCACAGCTTTCTGTCGCGCGGGCTaGAGGGACCGTCCTATCTCTCCATGGTCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: AGGGGTAFCRAG*RDRPISPWSEE
Trigger: CTCTTCTGACCATGGAGAGATAGGACGGTCCCTGCAGCCCGCGCGACAGAAAGCTGTGCCGCCACCACCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 72 bp ATCCACGGGGGAGCCACGGAGTTGCAGCTGACGCGGTaGCAGATGCGTTTGTGCATCCACAGGACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: IHGGATELQLTR*QMRLCIHRTSG
Trigger: CCCCGAGGTCCTGTGGATGCACAAACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCCGTGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 72 bp ACTGTCCCTCTCGCGGCGCGCGCGGCGATGCACGCGTaGGTGCAGCACCATCTGATGATAGGTGCGGAAGAT +
Preference number: 6 (lower is better)
Translates to: TVPLAARAAMHA*VQHHLMIGAED
Trigger: ATCTTCCGCACCTATCATCAGATGGTGCTGCACTCACGCGTGCATCGCCGCGCGCGCCGCGAGAGGGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 72 bp TCCGGAGTGTCCCTCTGTGCTCCAACCCAGGGCCGCTaGCACCCCATCCCTGGTAGAGGGTCGCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SGVSLCAPTQGR*HPIPGRGSQSP
Trigger: AGGACTTTGCGACCCTCTACCAGGGATGGGGTGTCAGCGGCCCTGGGTTGGAGCACAGAGGGACACTCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp CCGCCTCCGGCTCGTGTCCCTGAATCAGAGTCCCCGTaGGGTGGCTCCGGATGTGAATCTTCAGGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: PPPARVPESESP*GGSGCESSGCP
Trigger: AGGGCAACCTGAAGATTCACATCCGGAGCCACCGCACGGGGACTCTGATTCAGGGACACGAGCCGGAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp TGGCGATGGGGTCCAGCTCACTCTTGGGCCTGTTCTTaGTGCCCGTCTTGGGGCCGTGCGCCTTCATGTGGT +
Preference number: 6 (lower is better)
Translates to: WRWGPAHSWACS*CPSWGRAPSCG
Trigger: ACCACATGAAGGCGCACGGCCCCAAGACGGGCAGCAAGAACAGGCCCAAGAGTGAGCTGGACCCCATCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp GAAGCTCTTTCCGCACTCGATGCAGACGAACTCTCCTaGCCGGGCCTGCGTCCGGAGTGTCCCTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: EALSALDADELS*PGLRPECPSVL
Trigger: GAGCACAGAGGGACACTCCGGACGCAGGCCCGGCCAGGAGAGTTCGTCTGCATCGAGTGCGGAAAGAGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CAA 72 bp AGGCCGGCGACGATCACCTCCTCCTGGACCACGTTGTaGATGGTGGCGATGGGGTCCAGCTCACTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: RPATITSSWTTL*MVAMGSSSLLG
Trigger: GCCCAAGAGTGAGCTGGACCCCATCGCCACCATCAACAACGTGGTCCAGGAGGAGGTGATCGTCGCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 90 bp TCCTGGACCACGTTGTTGATGGTGGCGATGGGGTCCAGCTCACTCTaGGGCCTGTTCTTGCTGCCCGTCTTGGGGCCGTGCGCCTTCATG +
Preference number: 6 (lower is better)
Translates to: SWTTLLMVAMGSSSL*GLFLLPVLGPCAFM
Trigger: CATGAAGGCGCACGGCCCCAAGACGGGCAGCAAGAACAGGCCCAAGAGTGAGCTGGACCCCATCGCCACCATCAACAACGTGGTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 72 bp TGGGCTGAATCCACGGGGGAGCCACGGAGTTGCAGCTaGCGCGGTGCCAGATGCGTTTGTGCATCCACAGGA +
Preference number: 6 (lower is better)
Translates to: WAESTGEPRSCS*RGARCVCASTG
Trigger: TCCTGTGGATGCACAAACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCCGTGGATTCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp GCAGCTCCAGGTCCTTCTTACGCTCGAACTGGCTCTTaGAGAAGGAGCACTGGACCGCTGCCTTGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: AAPGPSYARTGS*RRSTGPLPWPP
Trigger: GGGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CGATGGGGTCCAGCTCACTCTTGGGCCTGTTCTTGCTaGCCGTCTTGGGGCCGTGCGCCTTCATGTGGTTCT +
Preference number: 6 (lower is better)
Translates to: RWGPAHSWACSC*PSWGRAPSCGS
Trigger: AGAACCACATGAAGGCGCACGGCCCCAAGACGGGCAGCAAGAACAGGCCCAAGAGTGAGCTGGACCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp TGTCGCGCGGGCTGCAGGGACCGTCCTATCTCTCCATaGTCAGAAGAGCCAAAAGACGTGCCTGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: CRAGCRDRPISP*SEEPKDVPAPR
Trigger: CCTGGGAGCAGGCACGTCTTTTGGCTCTTCTGACCATGGAGAGATAGGACGGTCCCTGCAGCCCGCGCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS CCA 72 bp GGGCCGGGCGCCCACAGAGCGCAGGGACCTCCGGAATaGCTCTCCTTATTCTTAGGCATGCTAGCGGCTTTT +
Preference number: 6 (lower is better)
Translates to: GPGAHRAQGPPE*LSLFLGMLAAF
Trigger: AAAAGCCGCTAGCATGCCTAAGAATAAGGAGAGCCATTCCGGAGGTCCCTGCGCTCTGTGGGCGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp AAGACGTGCCTGCTCCCAGGAGGTGCACCTTCTACATaGGGGGCGCAGCAGCTGGCAGCCAGCACCTTCAAT +
Preference number: 6 (lower is better)
Translates to: KTCLLPGGAPST*GAQQLAASTFN
Trigger: ATTGAAGGTGCTGGCTGCCAGCTGCTGCGCCCCCCATGTAGAAGGTGCACCTCCTGGGAGCAGGCACGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532857.1
CDS GCA 72 bp AGCCTGCACTTGAACGGCTTGTGCGCCTGGTGCACGTaGAGCTCCAGGTCCTTCTTACGCTCGAACTGGCTC +
Preference number: 6 (lower is better)
Translates to: SLHLNGLCAWCT*SSRSFLRSNWL
Trigger: GAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAGGCGCACAAGCCGTTCAAGTGCAGGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp CTGCACAGCCTGCACTTGAACGGCTTGTGCGCCTGGTaGACGTGCAGCTCCAGGTCCTTCTTACGCTCGAAC +
Preference number: 6 (lower is better)
Translates to: LHSLHLNGLCAW*TCSSRSFLRSN
Trigger: GTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAGGCGCACAAGCCGTTCAAGTGCAGGCTGTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 72 bp TGCAGCTCCAGGTCCTTCTTACGCTCGAACTGGCTCTaGCAGAAGGAGCACTGGACCGCTGCCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: CSSRSFLRSNWL*QKEHWTAALAS
Trigger: GGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 72 bp TCCTTGTTGTGCAAATCGGACAGCTTTTCTGCAGGGTaGCCCGTCTGGCCCTCCGCTCCCGTACTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: SLLCKSDSFSAG*PVWPSAPVLEG
Trigger: CCCTTCCAGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGATTTGCACAACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp CTAAAGCCGCCTGCAGGGAGGAGGCCGTCTCCTTATTaGTGGGGTCATCCCGCGTCGACCTCGCACTTAAAT +
Preference number: 6 (lower is better)
Translates to: LKPPAGRRPSPY*WGHPASTSHLN
Trigger: ATTTAAGTGCGAGGTCGACGCGGGATGACCCCAGCAATAAGGAGACGGCCTCCTCCCTGCAGGCGGCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp TGCACGTGCAGCTCCAGGTCCTTCTTACGCTCGAACTaGCTCTTGCAGAAGGAGCACTGGACCGCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: CTCSSRSFLRSN*LLQKEHWTAAL
Trigger: CAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAAGGACCTGGAGCTGCACGTGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CAA 72 bp ACTAAAGCCGCCTGCAGGGAGGAGGCCGTCTCCTTATaGCTGGGGTCATCCCGCGTCGACCTCGCACTTAAA +
Preference number: 6 (lower is better)
Translates to: TKAACREEAVSL*LGSSRVDLALK
Trigger: TTTAAGTGCGAGGTCGACGCGGGATGACCCCAGCAATAAGGAGACGGCCTCCTCCCTGCAGGCGGCTTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp AGTGCAGCACCATCTGATGATAGGTGCGGAAGATCTTaGCGCACTCGAAGCACTCGGAGGACTTGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SAAPSDDRCGRS*RTRSTRRTCPG
Trigger: GCCAGGGCAAGTCCTCCGAGTGCTTCGAGTGCGGCAAGATCTTCCGCACCTATCATCAGATGGTGCTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS CCA 72 bp AATGGTCTCTCCCTTGTTTGGGGGCGTCTGCGGAGGTaGTATGAACTTCAGAACCCCGAGGCCCATCGGACT +
Preference number: 6 (lower is better)
Translates to: NGLSLVWGRLRR*YELQNPEAHRT
Trigger: AGTCCGATGGGCCTCGGGGTTCTGAAGTTCATACCACCTCCGCAGACGCCCCCAAACAAGGGAGAGACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS TCA 72 bp CCGGTGTCTCTTTCCGAGGCGTTATCTCCCATCTTGTaGCTCTGGTCTCCACTGGAGAGCTCGGTCGAAGTC +
Preference number: 6 (lower is better)
Translates to: PVSLSEALSPIL*LWSPLESSVEV
Trigger: GACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTCACAAGATGGGAGATAACGCCTCGGAAAGAGACACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp GTCCTATCTCTCCATGGTCAGAAGAGCCAAAAGACGTaGCTGCTCCCAGGAGGTGCACCTTCTACATGGGGG +
Preference number: 6 (lower is better)
Translates to: VLSLHGQKSQKT*LLPGGAPSTWG
Trigger: CCCCCATGTAGAAGGTGCACCTCCTGGGAGCAGGCACGTCTTTTGGCTCTTCTGACCATGGAGAGATAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000532857.1
CDS GCA 72 bp AGAGTGTTCCTTGTTGTGCAAATCGGACAGCTTTTCTaGAGGGTGACCCGTCTGGCCCTCCGCTCCCGTACT +
Preference number: 6 (lower is better)
Translates to: RVFLVVQIGQLF*RVTRLALRSRT
Trigger: AGTACGGGAGCGGAGGGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGATTTGCACAACAAGGAACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS GCA 72 bp TGTGTTAGAATGGTCTCTCCCTTGTTTGGGGGCGTCTaGGGAGGTGGTATGAACTTCAGAACCCCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: CVRMVSPLFGGV*GGGMNFRTPRP
Trigger: GGGCCTCGGGGTTCTGAAGTTCATACCACCTCCGCAGACGCCCCCAAACAAGGGAGAGACCATTCTAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443185.7
CDS GCA 72 bp GTCTTAAAGATGTTGAGGATGTCCAGGCGCTTCTCATaGCCCTCGGCCACCGGCTCCTGTTTGATGGAGTGT +
Preference number: 6 (lower is better)
Translates to: VLKMLRMSRRFS*PSATGSCLMEC
Trigger: ACACTCCATCAAACAGGAGCCGGTGGCCGAGGGGCATGAGAAGCGCCTGGACATCCTCAACATCTTTAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp TTTCAAGTATGGACACAGAAGCTGCGATCCCTGCCTTaGACTCGCCGGTGTCTCTTTCCGAGGCGTTATCTC +
Preference number: 6 (lower is better)
Translates to: FQVWTQKLRSLP*TRRCLFPRRYL
Trigger: GAGATAACGCCTCGGAAAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAGCTTCTGTGTCCATACTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CCA 72 bp GGCAGCCAGCACCTTCAATCAAGATTCGAAACTGCATaGCAGGCTGACGGGGGCAATGCCTTTCTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: GSQHLQSRFETA*QADGGNAFLLY
Trigger: ATACAGCAGAAAGGCATTGCCCCCGTCAGCCTGCCATGCAGTTTCGAATCTTGATTGAAGGTGCTGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532857.1
CDS CAA 72 bp TTTTCAAGTATGGACACAGAAGCTGCGATCCCTGCCTaGGACTCGCCGGTGTCTCTTTCCGAGGCGTTATCT +
Preference number: 6 (lower is better)
Translates to: FSSMDTEAAIPA*DSPVSLSEALS
Trigger: AGATAACGCCTCGGAAAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAGCTTCTGTGTCCATACTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS CAA 72 bp GTCGCAAAGTCCTTTGGAATGTACGTCTTAAAGATGTaGAGGATGTCCAGGCGCTTCTCATGCCCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: VAKSFGMYVLKM*RMSRRFSCPSA
Trigger: GGCCGAGGGGCATGAGAAGCGCCTGGACATCCTCAACATCTTTAAGACGTACATTCCAAAGGACTTTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 72 bp ACACCATCACCAGGGACGGGCACCTCCTGCTTGGGGTaGAATGCTGGCATCTTTAAGTCCATAGAAAATCTG +
Preference number: 6 (lower is better)
Translates to: TPSPGTGTSCLG*NAGIFKSIENL
Trigger: CAGATTTTCTATGGACTTAAAGATGCCAGCATTTCACCCCAAGCAGGAGGTGCCCGTCCCTGGTGATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443185.7
ENST00000617840.1
CDS TCA 72 bp GCACCTTCAATCAAGATTCGAAACTGCATGGCAGGCTaGCGGGGGCAATGCCTTTCTGCTGTATGTGTAAGT +
Preference number: 6 (lower is better)
Translates to: APSIKIRNCMAG*RGQCLSAVCVS
Trigger: ACTTACACATACAGCAGAAAGGCATTGCCCCCGTCAGCCTGCCATGCAGTTTCGAATCTTGATTGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532857.1
CDS CCA 72 bp TGTGGAAATGCAATGACAACGCTCCCAGTTGGATGCTaGTACTCTCAGCTAAAAGTGTTCAGAGAAGGACCG +
Preference number: 6 (lower is better)
Translates to: CGNAMTTLPVGC*YSQLKVFREGP
Trigger: CGGTCCTTCTCTGAACACTTTTAGCTGAGAGTACCAGCATCCAACTGGGAGCGTTGTCATTGCATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443185.7