RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF514 (Homo sapiens)

Ensembl gene IDs: ENSG00000144026

Ensembl transcript IDs: ENST00000295208.7, ENST00000411425.1, ENST00000447814.1, ENST00000496060.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGTACTTCCAGATCCAGATGCCTCCTGTGCATCCTACCTGCCCTaGCCAACCTTGTGGACTCTTAGACCCAGCCTGTCTGCATGGGCC +
Preference number: 1 (lower is better)
Translates to: QVLPDPDASCASYLP*PTLWTLRPSLSAWA
Trigger: GGCCCATGCAGACAGGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGTACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 90 bp CTGTCCAAGTACTTCCAGATCCAGATGCCTCCTGTGCATCCTACCTaGCCTGGCCAACCTTGTGGACTCTTAGACCCAGCCTGTCTGCAT +
Preference number: 1 (lower is better)
Translates to: LSKYFQIQMPPVHPT*PGQPCGLLDPACLH
Trigger: ATGCAGACAGGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGTACTTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 90 bp CTGTGTGATCTTGACCTCAGCTGTCCAAGTACTTCCAGATCCAGATaGCTCCTGTGCATCCTACCTGCCCTGGCCAACCTTGTGGACTCT +
Preference number: 1 (lower is better)
Translates to: LCDLDLSCPSTSRSR*LLCILPALANLVDS
Trigger: AGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGTACTTGGACAGCTGAGGTCAAGATCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 90 bp GTAGAGAAGGTGCCCCCGGCTGATAGAACAGCTAAGGTAAAGGTTTaGAGGCTGAGATGTGGAAAGGCATGTCTGAGGGATGACAAGAGA +
Preference number: 1 (lower is better)
Translates to: VEKVPPADRTAKVKV*RLRCGKACLRDDKR
Trigger: TCTCTTGTCATCCCTCAGACATGCCTTTCCACATCTCAGCCTGCAAACCTTTACCTTAGCTGTTCTATCAGCCGGGGGCACCTTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR TCA 90 bp GGTAAAGGTTTGCAGGCTGAGATGTGGAAAGGCATGTCTGAGGGATaGCAAGAGAGCATTTGTGTGCAATGGAGGCTTCTGTCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: GKGLQAEMWKGMSEG*QESICVQWRLLSGA
Trigger: TGCTCCTGACAGAAGCCTCCATTGCACACAAATGCTCTCTTGTCATCCCTCAGACATGCCTTTCCACATCTCAGCCTGCAAACCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR TCA 90 bp GTTGTACTGCAAAGATCCAGTCTATTAATCTCCATACTACAGCTGTaGACCACAGGAAAGAGGCCCAGCCCAGTTAGGACTATAGGCCAA +
Preference number: 1 (lower is better)
Translates to: VVLQRSSLLISILQL*TTGKRPSPVRTIGQ
Trigger: TTGGCCTATAGTCCTAACTGGGCTGGGCCTCTTTCCTGTGGTTCACAGCTGTAGTATGGAGATTAATAGACTGGATCTTTGCAGTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 90 bp TGCTCTAGCACAAATTCTCTAATGTACAAATTCTCTAACGTGTTTTaGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGTCACC +
Preference number: 1 (lower is better)
Translates to: CSSTNSLMYKFSNVF*WNIHQSPSHIHHVT
Trigger: GGTGACGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAATTTGTACATTAGAGAATTTGTGCTAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CCA 90 bp TCTAGCACAAATTCTCTAATGTACAAATTCTCTAACGTGTTTTGGTaGAACATCCACCAAAGCCCTTCCCACATTCATCACGTCACCAGA +
Preference number: 1 (lower is better)
Translates to: SSTNSLMYKFSNVFW*NIHQSPSHIHHVTR
Trigger: TCTGGTGACGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAATTTGTACATTAGAGAATTTGTGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR GCA 90 bp CTTAAGTCTGATAAGAAACATTTACAATCTATTCTCTCTGAAGCCTaGTACCTTCTGGCTTCATCTCACAGTAAGAACCTTGGTCTCCAC +
Preference number: 1 (lower is better)
Translates to: LKSDKKHLQSILSEA*YLLASSHSKNLGLH
Trigger: GTGGAGACCAAGGTTCTTACTGTGAGATGAAGCCAGAAGGTAGCAGGCTTCAGAGAGAATAGATTGTAAATGTTTCTTATCAGACTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 90 bp ATAAGAAACATTTACAATCTATTCTCTCTGAAGCCTGCTACCTTCTaGCTTCATCTCACAGTAAGAACCTTGGTCTCCACAACACCTTAT +
Preference number: 1 (lower is better)
Translates to: IRNIYNLFSLKPATF*LHLTVRTLVSTTPY
Trigger: ATAAGGTGTTGTGGAGACCAAGGTTCTTACTGTGAGATGAAGCCAGAAGGTAGCAGGCTTCAGAGAGAATAGATTGTAAATGTTTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 90 bp CTTGTAACATTTGCAGTTACTTTGTTTCTGAAGATCTGCCATTTCTaGACATTTCCTAAAATGGTACTAGAAAATACCTGGTCTCTGGCA +
Preference number: 1 (lower is better)
Translates to: LVTFAVTLFLKICHF*TFPKMVLENTWSLA
Trigger: TGCCAGAGACCAGGTATTTTCTAGTACCATTTTAGGAAATGTCCAGAAATGGCAGATCTTCAGAAACAAAGTAACTGCAAATGTTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCACCTGCTGCTGCTCCTaGCAAGAGCCACCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALTCCCS*QEPPWA
Trigger: TGCCCAAGGTGGCTCTTGTCAGGAGCAGCAGCAGGT...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR GCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCCCTGTGCATCCTACCTaGCCTGGCCAACCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALPVHPT*PGQPCG
Trigger: TCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGG...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTGGGATGAGCCCTGACTaGAGGCCTTCCTCTATTTCC +
Preference number: 2 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAGMSPD*RPSSIS
Trigger: GGAAATAGAGGAAGGCCTTCAGTCAGGGCTCATCCC...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTGCAATGAGGTTTGGCTaGAGGCTCTCCCACATTACC +
Preference number: 2 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLAMRFG*RLSHIT
Trigger: GGTAATGTGGGAGAGCCTTCAGCCAAACCTCATTGC...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGCAATGAGGTTTGGCTaGAGGCTCTCCCACATTACC +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALAMRFG*RLSHIT
Trigger: GGTAATGTGGGAGAGCCTTCAGCCAAACCTCATTGC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 90 bp TTGATTCCAGGTCTTTGGATAAACCCACTGCCAATCAGAAAATCTTaGAATCCACCTATAACCCAGAAGGCCCTCCCTCTGTCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LIPGLWINPLPIRKS*NPPITQKALPLSLS
Trigger: GGACAGGGACAGAGGGAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTTTATCCAAAGACCTGGAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACGAATCAGTATGTAACTaGAGGCTTGCCACACTCACT +
Preference number: 2 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHESVCN*RLATLT
Trigger: AGTGAGTGTGGCAAGCCTTCAGTTACATACTGATTC...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCACCGTCAGTAACAGCATaGGGAGGCAATGCACAAGTG +
Preference number: 2 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAPSVTA*GGNAQV
Trigger: CACTTGTGCATTGCCTCCTCATGCTGTTACTGACGG...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCATCCATACTACAGCTGTaGACCACAGGAAAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: PLHCLTKKGNMCYRERSASILQL*TTGKRP
Trigger: GGGCCTCTTTCCTGTGGTTCACAGCTGTAGTATGGA...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTTTGAGCTGGTTCCCTaGATTCTGGGCTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALFELVP*ILGSTS
Trigger: GGAAGTTGAGCCCAGAATTCAGGGAACCAGCTCAAA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 90 bp TCTCCCATGTTTGGTAAGAGAGGGGAAGCCCACCCCCTCTTGACATaGACAGGGATTCTCTTTAGTAATTATTGCCTGATGTGGAACAAG +
Preference number: 2 (lower is better)
Translates to: SPMFGKRGEAHPLLT*TGILFSNYCLMWNK
Trigger: CTTGTTCCACATCAGGCAATAATTACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTCCCCTCTCTTACCAAACATGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CAA 90 bp ATGGATTCTCCCATGTTTGGTAAGAGAGGGGAAGCCCACCCCCTCTaGACATTGACAGGGATTCTCTTTAGTAATTATTGCCTGATGTGG +
Preference number: 2 (lower is better)
Translates to: MDSPMFGKRGEAHPL*TLTGILFSNYCLMW
Trigger: CCACATCAGGCAATAATTACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTCCCCTCTCTTACCAAACATGGGAGAATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGGAATCAGTATGTAACTaGAGGCTTGCCACACTCACT +
Preference number: 2 (lower is better)
Translates to: SLTCFGGTSTKALPTFITESVCN*RLATLT
Trigger: AGTGAGTGTGGCAAGCCTTCAGTTACATACTGATTC...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR GCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAAGTTCCAGTGATGTCTaGACTCCAGCTGAAAGCCCT +
Preference number: 2 (lower is better)
Translates to: PLHCLTKKGNMCYRERSASSSDV*TPAESP
Trigger: AGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR GCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCACCTTCCTCTATTTCCTaGTTTCATAGGGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSPSSIS*FHRASL
Trigger: GAGAGAGGCCCTATGAAAGCAGGAAATAGAGGAAGG...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR CCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACTTCTCTAACGTGTTTTaGTGGAACATCCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHFSNVF*WNIHQS
Trigger: GCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAA...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CAA 90 bp TCTCTGAAGCCTGCTACCTTCTGGCTTCATCTCACAGTAAGAACCTaGGTCTCCACAACACCTTATCTTAACCCAGACATTCCCTTCTAT +
Preference number: 2 (lower is better)
Translates to: SLKPATFWLHLTVRT*VSTTPYLNPDIPFY
Trigger: ATAGAAGGGAATGTCTGGGTTAAGATAAGGTGTTGTGGAGACCAAGGTTCTTACTGTGAGATGAAGCCAGAAGGTAGCAGGCTTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGGGTTTATAAAGCAATaGGGTTTGGCTGAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALGFIKQ*GLAEGS
Trigger: AGAGCCTTCAGCCAAACCTCATTGCTTTATAAACCC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACGGTTTCTCACTAGTATaGATTCTCCCATGTTTGGTA +
Preference number: 2 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHGFSLV*ILPCLV
Trigger: TACCAAACATGGGAGAATCCATACTAGTGAGAAACC...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAATAATATGCATCCTCTaGTCAAAGCGTTCCCACATT +
Preference number: 2 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSIICIL*SKRSHI
Trigger: AATGTGGGAACGCTTTGATCAGAGGATGCATATTAT...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTCTAGTATGTGTTCTTaGTGCTTAGTAAAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLSSMCS*CLVKEE
Trigger: CTCTTCCTTTACTAAGCATCAAGAACACATACTAGA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTGGGATGAGCCCTGACTaGAGGCCTTCCTCTATTTCC +
Preference number: 2 (lower is better)
Translates to: FLSFFSALVLYISSWKGTGMSPD*RPSSIS
Trigger: GGAAATAGAGGAAGGCCTTCAGTCAGGGCTCATCCC...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGGTTTCTCTTTGAGATaGATACTGAAGCTTGAACTC +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALGFSLR*ILKLEL
Trigger: GAGTTCAAGCTTCAGTATTCATCTCAAAGAGAAACC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTGGTTTCTCTTTGAGATaGATACTGAAGCTTGAACTC +
Preference number: 2 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAGFSLR*ILKLEL
Trigger: GAGTTCAAGCTTCAGTATTCATCTCAAAGAGAAACC...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR CCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTATGTGGAACAAGATGTaGTCTTCCCACATACATTAC +
Preference number: 2 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAMWNKM*SSHIHY
Trigger: GTAATGTATGTGGGAAGACCACATCTTGTTCCACAT...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR CCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGGTTTCTCACTAGTATaGATTCTCCCATGTTTGGTA +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALGFSLV*ILPCLV
Trigger: TACCAAACATGGGAGAATCCATACTAGTGAGAAACC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR TCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTTGTCTGCACTCCAGCTaGAAGCCCTTCTATATTCAC +
Preference number: 2 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFCLHSS*KPFYIH
Trigger: GTGAATATAGAAGGGCTTTCAGCTGGAGTGCAGACA...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAAATCACCAGACAAGGTaGTTTCTCAGCTTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: PLHCLTKKGNMCYRERSANHQTR*FLSFFS
Trigger: TGAAAAGAAGCTGAGAAATCACCTTGTCTGGTGATT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR GCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTTGTTTCTGAAGATCTaGCATTTCTGGACATTTCCT +
Preference number: 2 (lower is better)
Translates to: NPLPIRKSLNPPITQKALLFLKI*HFWTFP
Trigger: AGGAAATGTCCAGAAATGGCAGATCTTCAGAAACAA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR GCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTAGTTCCAGTGATGTCTaGACTCCAGCTGAAAGCCCT +
Preference number: 2 (lower is better)
Translates to: FLSFFSALVLYISSWKGTSSSDV*TPAESP
Trigger: AGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACT...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR TCA 90 bp ACATCAGTTTTATTAGCTCTAAAATACGACTGGGCTAGATCATGGGTAGCTGTCATAATATGCATCCTCTaGTCAAAGCGTTCCCACATT +
Preference number: 2 (lower is better)
Translates to: TSVLLALKYDWARSWVAVIICIL*SKRSHI
Trigger: AATGTGGGAACGCTTTGATCAGAGGATGCATATTAT...GACAGCTACCCATGATCTAGCCCAGTCGTATTTTAGAGCTAATAAAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CCA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTTGGTTCCCTGAATTCTaGGCTCAACTTCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSWFPEF*AQLPHL
Trigger: CAGATGAGGAAGTTGAGCCCAGAATTCAGGGAACCA...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CCA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTGTGTCGTTATACAAATaGCCCCACCAGGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSVSLYK*PHQAEN
Trigger: ATTTTCTGCCTGGTGGGGCCATTTGTATAACGACAC...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 90 bp GTGATTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTaGGAAAGGAACTTTCCTCACATTCATCATGTTCCCAAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: VISQLLFSSSFIHLK*ERNFPHIHHVPKVS
Trigger: AGAAACCTTGGGAACATGATGAATGTGAGGAAAGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR CCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTATGTGGAACAAGATGTaGTCTTCCCACATACATTAC +
Preference number: 2 (lower is better)
Translates to: FLSFFSALVLYISSWKGTMWNKM*SSHIHY
Trigger: GTAATGTATGTGGGAAGACCACATCTTGTTCCACAT...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR GCA 72 bp CTCAGCCTCCATCCTCTGCACCCATGCATGACACCCTaGCCCGTCAGTAACAGCATGAGGAGGCAATGCACA +
Preference number: 3 (lower is better)
Translates to: LSLHPLHPCMTP*PVSNSMRRQCT
Trigger: TGTGCATTGCCTCCTCATGCTGTTACTGACGGGGCAGGGTGTCATGCATGGGTGCAGAGGATGGAGGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp CCAGATCCAGATGCCTCCTGTGCATCCTACCTGCCCTaGCCAACCTTGTGGACTCTTAGACCCAGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: PDPDASCASYLP*PTLWTLRPSLS
Trigger: AGACAGGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp TACTTCCAGATCCAGATGCCTCCTGTGCATCCTACCTaGCCTGGCCAACCTTGTGGACTCTTAGACCCAGCC +
Preference number: 3 (lower is better)
Translates to: YFQIQMPPVHPT*PGQPCGLLDPA
Trigger: GGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp AGCTGTCCAAGTACTTCCAGATCCAGATGCCTCCTGTaGATCCTACCTGCCCTGGCCAACCTTGTGGACTCT +
Preference number: 3 (lower is better)
Translates to: SCPSTSRSRCLL*ILPALANLVDS
Trigger: AGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGTACTTGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp GTGCCCCCGGCTGATAGAACAGCTAAGGTAAAGGTTTaGAGGCTGAGATGTGGAAAGGCATGTCTGAGGGAT +
Preference number: 3 (lower is better)
Translates to: VPPADRTAKVKV*RLRCGKACLRD
Trigger: ATCCCTCAGACATGCCTTTCCACATCTCAGCCTGCAAACCTTTACCTTAGCTGTTCTATCAGCCGGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CAA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTGAAGCCCACCCCCTCTaGACATTGACAGGGATTCTC +
Preference number: 3 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAEAHPL*TLTGIL
Trigger: GAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTC...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR TCA 72 bp TTGCAGGCTGAGATGTGGAAAGGCATGTCTGAGGGATaGCAAGAGAGCATTTGTGTGCAATGGAGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: LQAEMWKGMSEG*QESICVQWRLL
Trigger: CAGAAGCCTCCATTGCACACAAATGCTCTCTTGTCATCCCTCAGACATGCCTTTCCACATCTCAGCCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp TTATTAGGCAAGTATCCTTTGGTCTACGCCAGCTCCTaGTCTAGGCTTCTCCACCTGAGTTACAGAGCCAAC +
Preference number: 3 (lower is better)
Translates to: LLGKYPLVYASS*SRLLHLSYRAN
Trigger: GTTGGCTCTGTAACTCAGGTGGAGAAGCCTAGACCAGGAGCTGGCGTAGACCAAAGGATACTTGCCTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CAA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCCACCCCCTCTTGACATaGACAGGGATTCTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSHPLLT*TGILFS
Trigger: ACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTG...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR-3UTR CAA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTCACCCCCTCTTGACATaGACAGGGATTCTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLHPLLT*TGILFS
Trigger: ACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTG...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR-3UTR CAA 90 bp ACATCAGTTTTATTAGCTCTAAAATACGACTGGGCTAGATCATGGGTAGCTGTCGAAGCCCACCCCCTCTaGACATTGACAGGGATTCTC +
Preference number: 3 (lower is better)
Translates to: TSVLLALKYDWARSWVAVEAHPL*TLTGIL
Trigger: GAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTC...GACAGCTACCCATGATCTAGCCCAGTCGTATTTTAGAGCTAATAAAACTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR TCA 72 bp CAAAGATCCAGTCTATTAATCTCCATACTACAGCTGTaGACCACAGGAAAGAGGCCCAGCCCAGTTAGGACT +
Preference number: 3 (lower is better)
Translates to: QRSSLLISILQL*TTGKRPSPVRT
Trigger: AGTCCTAACTGGGCTGGGCCTCTTTCCTGTGGTTCACAGCTGTAGTATGGAGATTAATAGACTGGATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR TCA 72 bp ATGGTAGGAACTTTAAAGCAGAGCCTGACAAGGTTCTaGGACCCAGTAAATGTAGGGGTAACTGTTACAGAA +
Preference number: 3 (lower is better)
Translates to: MVGTLKQSLTRF*DPVNVGVTVTE
Trigger: TTCTGTAACAGTTACCCCTACATTTACTGGGTCTCAGAACCTTGTCAGGCTCTGCTTTAAAGTTCCTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp ATTTACAATCTATTCTCTCTGAAGCCTGCTACCTTCTaGCTTCATCTCACAGTAAGAACCTTGGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: IYNLFSLKPATF*LHLTVRTLVST
Trigger: TGTGGAGACCAAGGTTCTTACTGTGAGATGAAGCCAGAAGGTAGCAGGCTTCAGAGAGAATAGATTGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp ACAAATTCTCTAATGTACAAATTCTCTAACGTGTTTTaGTGGAACATCCACCAAAGCCCTTCCCACATTCAT +
Preference number: 3 (lower is better)
Translates to: TNSLMYKFSNVF*WNIHQSPSHIH
Trigger: ATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAATTTGTACATTAGAGAATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CCA 72 bp TTCTGGACATTTCCTAAAATGGTACTAGAAAATACCTaGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCA +
Preference number: 3 (lower is better)
Translates to: FWTFPKMVLENT*SLASAFFHLES
Trigger: TGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACCATTTTAGGAAATGTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp TCATTATACCTTCCTCTCTTTGGAATTCAGGCACAGTaGACCAGCATTAACATTAAAACAGAGACCTTAAGA +
Preference number: 3 (lower is better)
Translates to: SLYLPLFGIQAQ*TSINIKTETLR
Trigger: TCTTAAGGTCTCTGTTTTAATGTTAATGCTGGTCCACTGTGCCTGAATTCCAAAGAGAGGAAGGTATAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp CATTTTCGTCACCCTAAAAAGATTCCTTGTAACATTTaGAGTTACTTTGTTTCTGAAGATCTGCCATTTCTG +
Preference number: 3 (lower is better)
Translates to: HFRHPKKIPCNI*SYFVSEDLPFL
Trigger: CAGAAATGGCAGATCTTCAGAAACAAAGTAACTGCAAATGTTACAAGGAATCTTTTTAGGGTGACGAAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CCA 72 bp TTTGCAGTTACTTTGTTTCTGAAGATCTGCCATTTCTaGACATTTCCTAAAATGGTACTAGAAAATACCTGG +
Preference number: 3 (lower is better)
Translates to: FAVTLFLKICHF*TFPKMVLENTW
Trigger: CCAGGTATTTTCTAGTACCATTTTAGGAAATGTCCAGAAATGGCAGATCTTCAGAAACAAAGTAACTGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp CTTGTAACATTTGCAGTTACTTTGTTTCTGAAGATCTaGCATTTCTGGACATTTCCTAAAATGGTACTAGAA +
Preference number: 3 (lower is better)
Translates to: LVTFAVTLFLKI*HFWTFPKMVLE
Trigger: TTCTAGTACCATTTTAGGAAATGTCCAGAAATGGCAGATCTTCAGAAACAAAGTAACTGCAAATGTTACAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR GCA 72 bp TTTGATTTCTCTCAGGACTTACTGTCATGTTGTTATTaGTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTC +
Preference number: 3 (lower is better)
Translates to: FDFSQDLLSCCY*YKESVFVSLKV
Trigger: GACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAGTAAGTCCTGAGAGAAATCAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 72 bp GATGCCTCCTGTGCATCCTACCTGCCCTGGCCAACCTaGTGGACTCTTAGACCCAGCCTGTCTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: DASCASYLPWPT*WTLRPSLSAWA
Trigger: GGCCCATGCAGACAGGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGGAGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTCGCCCCGCTGTCCCTaGCTAGCTCCGGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALSPRCP*LAPACT
Trigger: TGTGCAGGCCGGAGCTAGGCAGGGACAGCGGGGCGA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGTGCTGCCCGGGGTCGTaGTCTTCCCTCGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITCCPGS*SSLAKS
Trigger: GGACTTGGCGAGGGAAGAGCACGACCCCGGGCAGCA...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR CCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTGAGCGGGACGCAGGCTaGGGCTGCCTGGGGGACACG +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSERDAG*GCLGDT
Trigger: CGTGTCCCCCAGGCAGCCCCAGCCTGCGTCCCGCTC...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTCCCCAAGAGGGCTCCTaGCCCTCTGCACGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLPQEGS*PSARSR
Trigger: TCTGGAGCGTGCAGAGGGCCAGGAGCCCTCTTGGGG...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR TCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCACAGCAGGGATTCGGTaGGAGCCTCACAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSTAGIR*EPHRSR
Trigger: CCTGCTCCTGTGAGGCTCTCACCGAATCCCTGCTGT...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGGCCCAGTACAGGTCTaGGCGCCCGCAGTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALGPVQV*APAVSE
Trigger: TTCGGAGACTGCGGGCGCGCAGACCTGTACTGGGCC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCCATCCTCTGCACCCATaGATGACACCCTGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSHPLHP*MTPCPV
Trigger: GACGGGGCAGGGTGTCATGCATGGGTGCAGAGGATG...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTCTCTGCACCCATGCATaGCACCCTGCCCCGTCAGTA +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLLCTHA*HPAPSV
Trigger: TACTGACGGGGCAGGGTGTCATGCATGGGTGCAGAG...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGTGGAGTGCAGTGGCGTaGTCTCGGCTGACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITWSAVA*SRLTAS
Trigger: GCTTGCAGTCAGCCGAGATCACGCCACTGCACTCCA...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTCCCAGCGCGGCGCACTaGTGCCCGGGGTCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFPSAAH*CPGSCS
Trigger: AGAGCACGACCCCGGGCAGCAGTGCGCCGCGCTGGG...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTAACCCAGCTCCCACGTaGATCCACACGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLNPAPT*IHTHSG
Trigger: CCCACTGTGCGTGTGGATCCACGTGGGAGCTGGGTT...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCCCCTGGCCAACCTTGTaGACTCTTAGACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSPWPTL*TLRPSL
Trigger: CAGGCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGG...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTAGGGGAAGCCTTCAGTaGGATTCCCCGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLRGSLQ*DSPASS
Trigger: GGAAGAGGCCGGGGAATCCCACTGAAGGCTTCCCCT...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACGGGATGAGCCCTGACTaGAGGCCTTCCTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHGMSPD*RPSSIS
Trigger: GGAAATAGAGGAAGGCCTTCAGTCAGGGCTCATCCC...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGCCTGTGCATCCTACCTaGCCTGGCCAACCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITPVHPT*PGQPCG
Trigger: TCCACAAGGTTGGCCAGGGCAGGTAGGATGCACAGG...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCACTCAGGACCAGGCTCTaGAACCCAGCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSALRTRL*NPAPTW
Trigger: CCACGTGGGAGCTGGGTTCCAGAGCCTGGTCCTGAG...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCGGGCCCACTTTGAGCTaGTTCCCTGAATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSGPTLS*FPEFWA
Trigger: AGCCCAGAATTCAGGGAACCAGCTCAAAGTGGGCCC...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCCTAGGCTTCTCCACCTaGGTTACAGAGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSLGFST*VTEPTW
Trigger: CCATGTTGGCTCTGTAACTCAGGTGGAGAAGCCTAG...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAACCTGCTGCTGCTCCTaGCAAGAGCCACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSATCCCS*QEPPWA
Trigger: TGCCCAAGGTGGCTCTTGTCAGGAGCAGCAGCAGGT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp GGTACTAGAAAATACCTGGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCACGTCCAGATGCCTCCTGTaGATCCTACCTGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GTRKYLVSGICLLSLRITSRCLL*ILPALA
Trigger: GGCCAGGGCAGGTAGGATGCACAGGAGGCATCTGGA...CGTGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACTGCTGCATCTCTAACTaGCCATCACAACCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHCCISN*PSQPQA
Trigger: AGCCTGCGGTTGTGATGGCCAGTTAGAGATGCAGCA...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCCCCAGCCTGTCTGCATaGGCCCACTTTGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALPSLSA*AHFELV
Trigger: AACCAGCTCAAAGTGGGCCCATGCAGACAGGCTGGG...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGGCAATGAGGTTTGGCTaGAGGCTCTCCCACATTACC +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITAMRFG*RLSHIT
Trigger: GGTAATGTGGGAGAGCCTTCAGCCAAACCTCATTGC...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCGGCATGTCTGAGGGATaGCAAGAGAGCATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSGMSEG*QESICV
Trigger: CACACAAATGCTCTCTTGTCATCCCTCAGACATGCC...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACAGTTCCAGTGATGTCTaGACTCCAGCTGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHSSSDV*TPAESP
Trigger: AGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACT...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCGATCCACACGCACAGTaGGCTCAGACTACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALDPHAQ*AQTTRR
Trigger: TCTCCTGGTAGTCTGAGCCCACTGTGCGTGTGGATC...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTCAGGTCCCGAGGCCTaGCTTTCAGGAATGAATTGG +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLSGPEA*LSGMNW
Trigger: CCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCGTTCTCAGGATCTCCTaGGGCTGTGTCAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSVLRIS*GCVRLV
Trigger: AACAAGTCTGACACAGCCCCAGGAGATCCTGAGAAC...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGTCTGGGTGGGTTCTCTaGGAGTTGTTTCCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITSGWVL*ELFPPK
Trigger: TTTAGGGGGAAACAACTCTCAGAGAACCCACCCAGA...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCATGGCGCCTAAGTTCTaGCTGGAAGTGAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSMAPKF*LEVKGL
Trigger: AAGTCCTTTCACTTCCAGTCAGAACTTAGGCGCCAT...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACATGGCGCCTAAGTTCTaGCTGGAAGTGAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHMAPKF*LEVKGL
Trigger: AAGTCCTTTCACTTCCAGTCAGAACTTAGGCGCCAT...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTGCATGGGCCCACTTTaGGCTGGTTCCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALCMGPL*AGSLNS
Trigger: AGAATTCAGGGAACCAGCTCAAAGTGGGCCCATGCA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGAGTTCCAGTGATGTCTaGACTCCAGCTGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITSSSDV*TPAESP
Trigger: AGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACT...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTGTTCCCTCTTCTCCTaGGAATCTCTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLCSLFS*ESLWRK
Trigger: CTTCCTCCAGAGAGATTCCCAGGAGAAGAGGGAACA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCATGCTGCATCTCTAACTaGCCATCACAACCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSCCISN*PSQPQA
Trigger: AGCCTGCGGTTGTGATGGCCAGTTAGAGATGCAGCA...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACGACTGGGCTAGATCATaGGTAGCTGTCTACCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHDWARS*VAVYLS
Trigger: AGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTC...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAGCATCCTACCTGCCCTaGCCAACCTTGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAASYLP*PTLWTL
Trigger: AAGAGTCCACAAGGTTGGCCAGGGCAGGTAGGATGC...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTTCCCCGGCCTCTTCCTaGGGTCCTCCTGATATCGGG +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFSPASS*GPPDIG
Trigger: CCCGATATCAGGAGGACCCCAGGAAGAGGCCGGGGA...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTCCTGGCTTTCAGGAATaGATTGGTTGTTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLPGFQE*IGCSLF
Trigger: GAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGG...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCTCCCCAACTTGGCATTaGTTCCTTGGATTTAGACCT +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSSPTWH*FLGFRP
Trigger: AGGTCTAAATCCAAGGAATCAATGCCAAGTTGGGGA...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCATCTGGGTGGGTTCTCTaGGAGTTGTTTCCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSSGWVL*ELFPPK
Trigger: TTTAGGGGGAAACAACTCTCAGAGAACCCACCCAGA...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAAGCCTGACAAGGTTCTaGGACCCAGTAAATGTAGGG +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSSLTRF*DPVNVG
Trigger: CCCTACATTTACTGGGTCTCAGAACCTTGTCAGGCT...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGTGGAAAGGCATGTCTaGGGGATGACAAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSVERHV*GMTREH
Trigger: ATGCTCTCTTGTCATCCCTCAGACATGCCTTTCCAC...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTACAATCTATTCTCTCTaGAGCCTGCTACCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLTIYSL*SLLPSG
Trigger: GCCAGAAGGTAGCAGGCTTCAGAGAGAATAGATTGT...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTCTCCAGAGCCAAACCTaGTGCTGTGGAGTCCATAGC +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSLQSQT*CCGVHS
Trigger: GCTATGGACTCCACAGCATCAGGTTTGGCTCTGGAG...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS-3UTR GCA 90 bp ACATCAGTTTTATTAGCTCTAAAATACGACTGGGCTAGATCATGGGTAGCTGTCGCTGACTGCAAGCTCTaGCTCCCCGATTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: TSVLLALKYDWARSWVAVADCKL*LPDSRH
Trigger: ATGGCGTGAATCGGGGAGGCAGAGCTTGCAGTCAGC...GACAGCTACCCATGATCTAGCCCAGTCGTATTTTAGAGCTAATAAAACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACCCTCTCACGTACCTTTaGCATGTTAACCATACTCGT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHPLTYL*HVNHTR
Trigger: ACGAGTATGGTTAACATGGCAAAGGTACGTGAGAGG...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCATCAGGTCCCGAGGCCTaGCTTTCAGGAATGAATTGG +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSASGPEA*LSGMNW
Trigger: CCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGA...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGCTCTTCCAGTCTGAGTaGGCTCCTGTTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITLFQSE*APVEIS
Trigger: AGAAATCTCAACAGGAGCCCACTCAGACTGGAAGAG...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGGGGTTTATAAAGCAATaGGGTTTGGCTGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITGFIKQ*GLAEGS
Trigger: AGAGCCTTCAGCCAAACCTCATTGCTTTATAAACCC...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTCCGTCAGTAACAGCATaGGGAGGCAATGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSPSVTA*GGNAQV
Trigger: CACTTGTGCATTGCCTCCTCATGCTGTTACTGACGG...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAATCACAACCGCAGGCTaGTTTCAACTTCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSITTAG*FQLREL
Trigger: CAGTTCTCGAAGTTGAAAGCAGCCTGCGGTTGTGAT...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp GGTACTAGAAAATACCTGGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCACGTGTTCCCTCTTCTCCTaGGAATCTCTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTRKYLVSGICLLSLRITCSLFS*ESLWRK
Trigger: CTTCCTCCAGAGAGATTCCCAGGAGAAGAGGGAACA...CGTGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTCTCTTCCAGTCTGAGTaGGCTCCTGTTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: YTNGPTRQKITRQGDFSALFQSE*APVEIS
Trigger: AGAAATCTCAACAGGAGCCCACTCAGACTGGAAGAG...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTGTCTACGCCAGCTCCTaGTCTAGGCTTCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFVYASS*SRLLHL
Trigger: CAGGTGGAGAAGCCTAGACCAGGAGCTGGCGTAGAC...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCTTGATTCCAGGTCTTTaGATAAACCCACTGCCAATC +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSLIPGL*INPLPI
Trigger: GATTGGCAGTGGGTTTATCCAAAGACCTGGAATCAA...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 72 bp CCCATGTTTGGTAAGAGAGGGGAAGCCCACCCCCTCTaGACATTGACAGGGATTCTCTTTAGTAATTATTGC +
Preference number: 4 (lower is better)
Translates to: PMFGKRGEAHPL*TLTGILFSNYC
Trigger: GCAATAATTACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTCCCCTCTCTTACCAAACATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CAA 72 bp GGTCTTTGGATAAACCCACTGCCAATCAGAAAATCTTaGAATCCACCTATAACCCAGAAGGCCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLWINPLPIRKS*NPPITQKALPL
Trigger: CAGAGGGAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTTTATCCAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCACCTGGCTTTCAGGAATaGATTGGTTGTTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAPGFQE*IGCSLF
Trigger: GAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGG...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCATCCCCAACTTGGCATTaGTTCCTTGGATTTAGACCT +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSSPTWH*FLGFRP
Trigger: AGGTCTAAATCCAAGGAATCAATGCCAAGTTGGGGA...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACCCCCTAAAGTCTGCCTaGATTCTGTATCACATTTAT +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHPLKSA*ILYHIY
Trigger: ATAAATGTGATACAGAATTCAGGCAGACTTTAGGGG...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTGGGTTTATAAAGCAATaGGGTTTGGCTGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAGFIKQ*GLAEGS
Trigger: AGAGCCTTCAGCCAAACCTCATTGCTTTATAAACCC...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACGGTTTCTCTTTGAGATaGATACTGAAGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHGFSLR*ILKLEL
Trigger: GAGTTCAAGCTTCAGTATTCATCTCAAAGAGAAACC...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGAGCAATAAGATAACATaGCAGATAACAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITSNKIT*QITGPE
Trigger: CTCAGGGCCTGTTATCTGTCATGTTATCTTATTGCT...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCCTCTCCTGTTTTATCTaGTGCATCTCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALLSCFI*CISNWP
Trigger: TGGCCAGTTAGAGATGCAGCAGATAAAACAGGAGAG...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGAGCATGAGGAGGCAATaGACAAGTGTCGTTATACAA +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITSMRRQ*TSVVIQ
Trigger: TTGTATAACGACACTTGTGCATTGCCTCCTCATGCT...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTACTTCCAGATCCAGATaGCTCCTGTGCATCCTACCT +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSTSRSR*LLCILP
Trigger: AGGTAGGATGCACAGGAGGCATCTGGATCTGGAAGT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTGATCCACACGCACAGTaGGCTCAGACTACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFDPHAQ*AQTTRR
Trigger: TCTCCTGGTAGTCTGAGCCCACTGTGCGTGTGGATC...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTAACCCAGCTCCCACGTaGATCCACACGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLSFFSALVLYISSWKGTNPAPT*IHTHSG
Trigger: CCCACTGTGCGTGTGGATCCACGTGGGAGCTGGGTT...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCGGTTTCTCACTAGTATaGATTCTCCCATGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSGFSLV*ILPCLV
Trigger: TACCAAACATGGGAGAATCCATACTAGTGAGAAACC...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTTCTCTAACGTGTTTTaGTGGAACATCCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLFSNVF*WNIHQS
Trigger: GCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTTTGCAGGCTGAGATGTaGAAAGGCATGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSLQAEM*KGMSEG
Trigger: TCCCTCAGACATGCCTTTCCACATCTCAGCCTGCAA...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 72 bp TTTGGTAAGAGAGGGGAAGCCCACCCCCTCTTGACATaGACAGGGATTCTCTTTAGTAATTATTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: FGKRGEAHPLLT*TGILFSNYCLM
Trigger: CATCAGGCAATAATTACTAAAGAGAATCCCTGTCAATGTCAAGAGGGGGTGGGCTTCCCCTCTCTTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
3UTR CAA 72 bp CCTGCTACCTTCTGGCTTCATCTCACAGTAAGAACCTaGGTCTCCACAACACCTTATCTTAACCCAGACATT +
Preference number: 4 (lower is better)
Translates to: PATFWLHLTVRT*VSTTPYLNPDI
Trigger: AATGTCTGGGTTAAGATAAGGTGTTGTGGAGACCAAGGTTCTTACTGTGAGATGAAGCCAGAAGGTAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGCCCCTAAAGTCTGCCTaGATTCTGTATCACATTTAT +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITPLKSA*ILYHIY
Trigger: ATAAATGTGATACAGAATTCAGGCAGACTTTAGGGG...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACTCTAGTATGTGTTCTTaGTGCTTAGTAAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHSSMCS*CLVKEE
Trigger: CTCTTCCTTTACTAAGCATCAAGAACACATACTAGA...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTGCAATGAGGTTTGGCTaGAGGCTCTCCCACATTACC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFAMRFG*RLSHIT
Trigger: GGTAATGTGGGAGAGCCTTCAGCCAAACCTCATTGC...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTAATCACCAGACAAGGTaGTTTCTCAGCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLNHQTR*FLSFFS
Trigger: TGAAAAGAAGCTGAGAAATCACCTTGTCTGGTGATT...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTTCCATACTACAGCTGTaGACCACAGGAAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFSILQL*TTGKRP
Trigger: GGGCCTCTTTCCTGTGGTTCACAGCTGTAGTATGGA...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp ACATCAGTTTTATTAGCTCTAAAATACGACTGGGCTAGATCATGGGTAGCTGTCTTTGAGCTGGTTCCCTaGATTCTGGGCTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: TSVLLALKYDWARSWVAVFELVP*ILGSTS
Trigger: GGAAGTTGAGCCCAGAATTCAGGGAACCAGCTCAAA...GACAGCTACCCATGATCTAGCCCAGTCGTATTTTAGAGCTAATAAAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp GGTACTAGAAAATACCTGGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCACGGAGAAGCATGAGATGTaGCATGAAGCAGCTGATAGT +
Preference number: 4 (lower is better)
Translates to: GTRKYLVSGICLLSLRITEKHEM*HEAADS
Trigger: ACTATCAGCTGCTTCATGTCACATCTCATGCTTCTC...CGTGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTCCAGCGCTCTTCAGCTaGCCGGAAACAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: FLSFFSALVLYISSWKGTPALFS*PETAGI
Trigger: AATCCCTGCTGTTTCCGGGCAGCTGAAGAGCGCTGG...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTATCACAACCGCAGGCTaGTTTCAACTTCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSITTAG*FQLREL
Trigger: CAGTTCTCGAAGTTGAAAGCAGCCTGCGGTTGTGAT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTAGCATGAGGAGGCAATaGACAAGTGTCGTTATACAA +
Preference number: 4 (lower is better)
Translates to: YTNGPTRQKITRQGDFSASMRRQ*TSVVIQ
Trigger: TTGTATAACGACACTTGTGCATTGCCTCCTCATGCT...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCAATATTTGCTATTTCTaGTCCTGTAAACCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSNICYF*SCKPWL
Trigger: CAGCCAAGGTTTACAGGAGCAGAAATAGCAAATATT...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAGCTAAGGTAAAGGTTTaGAGGCTGAGATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAAKVKV*RLRCGK
Trigger: CTTTCCACATCTCAGCCTGCAAACCTTTACCTTAGC...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAATTCTCTCTGAAGCCTaGTACCTTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAILSEA*YLLASS
Trigger: AGATGAAGCCAGAAGGTAGCAGGCTTCAGAGAGAAT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGAGATCACATATGGTTTaGATACTAGAAGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITRSHMV*ILEGPE
Trigger: TTCTGGGCCTTCTAGTATCCAAACCATATGTGATCT...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAATACCTTCCTCTCTTTaGAATTCAGGCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAIPSSL*NSGTVD
Trigger: GTCCACTGTGCCTGAATTCCAAAGAGAGGAAGGTAT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
3UTR CAA 72 bp GGGTGGTCAGACATACCTCATTATACCTTCCTCTCTTaGGAATTCAGGCACAGTGGACCAGCATTAACATTA +
Preference number: 4 (lower is better)
Translates to: GWSDIPHYTFLS*EFRHSGPALTL
Trigger: TAATGTTAATGCTGGTCCACTGTGCCTGAATTCCAAAGAGAGGAAGGTATAATGAGGTATGTCTGACCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTGGCGTAAAACACTTTaGTTTCTCTCAGGACTTACT +
Preference number: 4 (lower is better)
Translates to: NPLPIRKSLNPPITQKALWRKTL*FLSGLT
Trigger: AGTAAGTCCTGAGAGAAATCAAAGTGTTTTACGCCA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTCTCTCCTGTTTTATCTaGTGCATCTCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSLSCFI*CISNWP
Trigger: TGGCCAGTTAGAGATGCAGCAGATAAAACAGGAGAG...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTCCATGCATGACACCCTaGCCCGTCAGTAACAGCATG +
Preference number: 4 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSPCMTP*PVSNSM
Trigger: CATGCTGTTACTGACGGGGCAGGGTGTCATGCATGG...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGACAAAAATTGCTTTTTaGTCAATCCTAGACCACTCC +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITTKIAF*SILDHS
Trigger: GGAGTGGTCTAGGATTGAGCAAAAAGCAATTTTTGT...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR GCA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTTGTTTCTGAAGATCTaGCATTTCTGGACATTTCCT +
Preference number: 4 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLLFLKI*HFWTFP
Trigger: AGGAAATGTCCAGAAATGGCAGATCTTCAGAAACAA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTGGTTTCTCACTAGTATaGATTCTCCCATGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAGFSLV*ILPCLV
Trigger: TACCAAACATGGGAGAATCCATACTAGTGAGAAACC...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTGTGTCGTTATACAAATaGCCCCACCAGGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSVSLYK*PHQAEN
Trigger: ATTTTCTGCCTGGTGGGGCCATTTGTATAACGACAC...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGCACGTTTTTGAGATCTaGATTGTGCATAATACCCAT +
Preference number: 4 (lower is better)
Translates to: SLTCFGGTSTKALPTFITHVFEI*IVHNTH
Trigger: ATGGGTATTATGCACAATCCAGATCTCAAAAACGTG...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACAAGATCTGCCATTTCTaGACATTTCCTAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHKICHF*TFPKMV
Trigger: TACCATTTTAGGAAATGTCCAGAAATGGCAGATCTT...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp GGTACTAGAAAATACCTGGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCACGAGGTATAAAGTGATCTaGGTAGGTACAGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTRKYLVSGICLLSLRITRYKVI*VGTEKG
Trigger: GCCCTTTTCTGTACCTACCCAGATCACTTTATACCT...CGTGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AAATACGACTGGGCTAGATCATGGGTAGCTGTCTACCTTTCTCAGCCTCCATCCTTTTCCATTGTCATCTaGTTCAGGAAACAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KYDWARSWVAVYLSQPPSFSIVI*FRKQES
Trigger: ACTTTCTTGTTTCCTGAACCAGATGACAATGGAAAA...GGATGGAGGCTGAGAAAGGTAGACAGCTACCCATGATCTAGCCCAGTCGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAAGATTTGTGAATGGTTaGCATTTGTTTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSRFVNG*HLFQVS
Trigger: AGACACCTGAAACAAATGTCAACCATTCACAAATCT...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTAGGCATGTCACTTTCTaGACATCAGTTTTATTAGCT +
Preference number: 4 (lower is better)
Translates to: YTNGPTRQKITRQGDFSARHVTF*TSVLLA
Trigger: AGCTAATAAAACTGATGTTCAGAAAGTGACATGCCT...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCATATGGCAAGGATACATaGGAAGAGGAGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAYGKDT*EEETDF
Trigger: AAAATCTGTCTCCTCTTCTCATGTATCCTTGCCATA...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAAGATCACATATGGTTTaGATACTAGAAGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLHCLTKKGNMCYRERSARSHMV*ILEGPE
Trigger: TTCTGGGCCTTCTAGTATCCAAACCATATGTGATCT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTAATCACCAGACAAGGTaGTTTCTCAGCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSNHQTR*FLSFFS
Trigger: TGAAAAGAAGCTGAGAAATCACCTTGTCTGGTGATT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTCCTAGACCACTCCATTaGCTCACAAAGAAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFPRPLH*LTKKGN
Trigger: GTTACCTTTCTTTGTGAGGCAATGGAGTGGTCTAGG...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTATGTGGAACAAGATGTaGTCTTCCCACATACATTAC +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSMWNKM*SSHIHY
Trigger: GTAATGTATGTGGGAAGACCACATCTTGTTCCACAT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTGTGTCGTTATACAAATaGCCCCACCAGGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFVSLYK*PHQAEN
Trigger: ATTTTCTGCCTGGTGGGGCCATTTGTATAACGACAC...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTAGATTTGTGAATGGTTaGCATTTGTTTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSRFVNG*HLFQVS
Trigger: AGACACCTGAAACAAATGTCAACCATTCACAAATCT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTCCTTCCTCTATTTCCTaGTTTCATAGGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLSFFSALVLYISSWKGTPSSIS*FHRASL
Trigger: GAGAGAGGCCCTATGAAAGCAGGAAATAGAGGAAGG...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTATGAGAATGCTGTGTTaGTTAACAAGGACTGATCTT +
Preference number: 4 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSMRMLC*LTRTDL
Trigger: AAGATCAGTCCTTGTTAACCAACACAGCATTCTCAT...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTTTCTCTAACGTGTTTTaGTGGAACATCCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFFSNVF*WNIHQS
Trigger: GCTTTGGTGGATGTTCCACCAAAACACGTTAGAGAA...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR TCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTGGTTTCTCTTTGAGATaGATACTGAAGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFGFSLR*ILKLEL
Trigger: GAGTTCAAGCTTCAGTATTCATCTCAAAGAGAAACC...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTATGTGGAACAAGATGTaGTCTTCCCACATACATTAC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFMWNKM*SSHIHY
Trigger: GTAATGTATGTGGGAAGACCACATCTTGTTCCACAT...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTAGAGGAGACAGATTTTaGACGAAGACCAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFRGDRF*TKTSYK
Trigger: TTTGTAACTGGTCTTCGTCCAAAATCTGTCTCCTCT...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR TCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTAATAGATCAAGACAGTaGTACGATTTACCACAAGTC +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFNRSRQ*YDLPQV
Trigger: GACTTGTGGTAAATCGTATCACTGTCTTGATCTATT...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CCA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTATGAGAATGCTGTGTTaGTTAACAAGGACTGATCTT +
Preference number: 4 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFMRMLC*LTRTDL
Trigger: AAGATCAGTCCTTGTTAACCAACACAGCATTCTCAT...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR GCA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTAAGAAAGGTAACATGTaGTACAGAGAAAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSKKGNM*YRERSA
Trigger: TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTT...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS GCA 90 bp GGCCAGCGGACCTGCAGGGCCCAGAGCAGGGCCGGCAAACCCCGGTaGGCCCAGCGCGGCGCACTGCTGCCCGGGGTCGTGCTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GQRTCRAQSRAGKPR*AQRGALLPGVVLFP
Trigger: AGGGAAGAGCACGACCCCGGGCAGCAGTGCGCCGCGCTGGGCGCACCGGGGTTTGCCGGCCCTGCTCTGGGCCCTGCAGGTCCGCTGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS GCA 90 bp CCCAGAGCAGGGCCGGCAAACCCCGGTGCGCCCAGCGCGGCGCACTaGTGCCCGGGGTCGTGCTCTTCCCTCGCCAAGTCCGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: PRAGPANPGAPSAAH*CPGSCSSLAKSGLL
Trigger: TAGGAGGCCGGACTTGGCGAGGGAAGAGCACGACCCCGGGCAGCAGTGCGCCGCGCTGGGCGCACCGGGGTTTGCCGGCCCTGCTCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS CCA 90 bp GACCAGGCTCTGGAACCCAGCTCCCACGTGGATCCACACGCACAGTaGGCTCAGACTACCAGGAGACACGGCCACAGCCACGCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: DQALEPSSHVDPHAQ*AQTTRRHGHSHARD
Trigger: GTCGCGGGCGTGGCTGTGGCCGTGTCTCCTGGTAGTCTGAGCCCACTGTGCGTGTGGATCCACGTGGGAGCTGGGTTCCAGAGCCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp GAGGGCCCAGCGCTCTTCAGCTGCCCGGAAACAGCAGGGATTCGGTaGGAGCCTCACAGGAGCAGGGACCGACTCTATCAGCCCGGTTCG +
Preference number: 5 (lower is better)
Translates to: EGPALFSCPETAGIR*EPHRSRDRLYQPGS
Trigger: CGAACCGGGCTGATAGAGTCGGTCCCTGCTCCTGTGAGGCTCTCACCGAATCCCTGCTGTTTCCGGGCAGCTGAAGAGCGCTGGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS CCA 90 bp GTCCTTTCACTAGGTCCAAATCTCTGTCTTTCGGCCACAGCCCTGTaGTCCTCCCGAGGGTTCAGGGAGCGGGACGCAGGCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: VLSLGPNLCLSATAL*SSRGFRERDAGWGC
Trigger: GCAGCCCCAGCCTGCGTCCCGCTCCCTGAACCCTCGGGAGGACCACAGGGCTGTGGCCGAAAGACAGAGATTTGGACCTAGTGAAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS CCA 90 bp GGTGATTCCAGCTTGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTaGCTGGTGTGCGCTGAAGCTGTCGGGAGTCGGACCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: GDSSLQPGPFQQLQG*LVCAEAVGSRTSCT
Trigger: TGTGCAGCTGGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCTGGAATCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 90 bp GTCCTCCTGATATCGGGCTCGGTACTAGCTCCCCAAGAGGGCTCCTaGCCCTCTGCACGCTCCAGAGCCAAACCTGATGCTGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VLLISGSVLAPQEGS*PSARSRAKPDAVES
Trigger: GGACTCCACAGCATCAGGTTTGGCTCTGGAGCGTGCAGAGGGCCAGGAGCCCTCTTGGGGAGCTAGTACCGAGCCCGATATCAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS TCA 90 bp GCTCCACAGCTGGGCCTCAGGCATCAATGTCGAAAGCTCTCCGGGTaGTTCCAGCTTGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: APQLGLRHQCRKLSG*FQLAARAVPATPRL
Trigger: CAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCTGGAATCACCCGGAGAGCTTTCGACATTGATGCCTGAGGCCCAGCTGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 90 bp ATTCCAGCTTGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTGGCTaGTGTGCGCTGAAGCTGTCGGGAGTCGGACCAGCTGCACAGTTA +
Preference number: 5 (lower is better)
Translates to: IPACSQGRSSNSKAG*CALKLSGVGPAAQL
Trigger: TAACTGTGCAGCTGGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS GCA 90 bp AGCTTGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTGGCTGGTGTaGGCTGAAGCTGTCGGGAGTCGGACCAGCTGCACAGTTAATACA +
Preference number: 5 (lower is better)
Translates to: SLQPGPFQQLQGWLV*AEAVGSRTSCTVNT
Trigger: TGTATTAACTGTGCAGCTGGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 90 bp ACTTTCCCACTCCCAAGACCAAGGGTCCTCACAGTGTCTGTCCAGTaGAATTTCACGACTGTTATGGACCCGGGACTGACTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: TFPLPRPRVLTVSVQ*NFTTVMDPGLTLPM
Trigger: CATGGGAAGAGTCAGTCCCGGGTCCATAACAGTCGTGAAATTCCACTGGACAGACACTGTGAGGACCCTTGGTCTTGGGAGTGGGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 90 bp AGGCTCCTCTCTCCTTCCAACGCAAATATGTGTACAAACCCTGCCTaGAACCGCAGCCCTGCTCTCAGAATCAAATTCCTGAAAGTGGGC +
Preference number: 5 (lower is better)
Translates to: RLLSPSNANMCTNPA*NRSPALRIKFLKVG
Trigger: GCCCACTTTCAGGAATTTGATTCTGAGAGCAGGGCTGCGGTTCCAGGCAGGGTTTGTACACATATTTGCGTTGGAAGGAGAGAGGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS-3UTR CAA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCCTGCCCTGGCCAACCTaGTGGACTCTTAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: NPLPIRKSLNPPITQKALLPWPT*WTLRPS
Trigger: GCTGGGTCTAAGAGTCCACAAGGTTGGCCAGGGCAG...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp CAGTGTCTGTCCAGTGGAATTTCACGACTGTTATGGACCCGGGACTaGCTCTTCCCATGCTTCCCTCTTCTGCAAAGGAGTGTCTACCAT +
Preference number: 5 (lower is better)
Translates to: QCLSSGISRLLWTRD*LFPCFPLLQRSVYH
Trigger: ATGGTAGACACTCCTTTGCAGAAGAGGGAAGCATGGGAAGAGTCAGTCCCGGGTCCATAACAGTCGTGAAATTCCACTGGACAGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS GCA 90 bp CACGAGCTACAGGTGAGCAAAAGCCTTCAGAGCCAGTGGGGGTTCTaGAATTGTCCTTTCCTGTCTGCCTTGCAAATGGCAAATGATCTG +
Preference number: 5 (lower is better)
Translates to: HELQVSKSLQSQWGF*NCPFLSALQMANDL
Trigger: CAGATCATTTGCCATTTGCAAGGCAGACAGGAAAGGACAATTGCAGAACCCCCACTGGCTCTGAAGGCTTTTGCTCACCTGTAGCTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 90 bp CTTCAAATGTCATCAGGTCCCGAGGCCTGGCTTTCAGGAATGAATTaGTTGTTCCCTCTTCTCCTGGGAATCTCTCTGGAGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LQMSSGPEAWLSGMN*LFPLLLGISLEEEQ
Trigger: CTGCTCTTCCTCCAGAGAGATTCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGATGACATTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTTAGGCAAGTATCCTTaGGTCTACGCCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLLGKYP*VYASSW
Trigger: CCAGGAGCTGGCGTAGACCAAAGGATACTTGCCTAA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCACCCACCAGCTTCAAGTaGTCCTGCCTTTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSPTSFK*SCLSPS
Trigger: CGATGGAGAAAGGCAGGACAACTTGAAGCTGGTGGG...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp TCCATCCAGACTATCGCGCCATCCAGGACTTTGATCATGATGCTCTaGCTGGATGCAGCTCTTGGGTTATTTCTCTTGGAGGGCATTTTG +
Preference number: 5 (lower is better)
Translates to: SIQTIAPSRTLIMML*LDAALGLFLLEGIL
Trigger: CAAAATGCCCTCCAAGAGAAATAACCCAAGAGCTGCATCCAGTCAGAGCATCATGATCAAAGTCCTGGATGGCGCGATAGTCTGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS TCA 90 bp GTCATCTGCTTTCTCAAACTGAACGTGAAAGACACGAGCTACAGGTaGGCAAAAGCCTTCAGAGCCAGTGGGGGTTCTGCAATTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VICFLKLNVKDTSYR*AKAFRASGGSAIVL
Trigger: AAGGACAATTGCAGAACCCCCACTGGCTCTGAAGGCTTTTGCTCACCTGTAGCTCGTGTCTTTCACGTTCAGTTTGAGAAAGCAGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS-3UTR CAA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTTCCTCACTCCCGTGTTaGGTAATGTCCTCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLSSLPC*VMSSLG
Trigger: GCCTAAAGAGGACATTACCAAACACGGGAGTGAGGA...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACAATCGACCCTTCCACTaGGCCAAGAGCATTCTAAAG +
Preference number: 5 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHNRPFH*AKSILK
Trigger: CTTTAGAATGCTCTTGGCCAAGTGGAAGGGTCGATT...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TCTCTAACGTGTTTTGGTGGAACATCCACCAAAGCCCTTCCCACATTCATCACGTCAGGAATGAATTGGTaGTTCCCTCTTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SLTCFGGTSTKALPTFITSGMNW*FPLLLG
Trigger: TCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGA...CGTGATGAATGTGGGAAGGGCTTTGGTGGATGTTCCACCAAAACACGTTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTAGCCTGACAGCACAATaGTCTCTTCCTCTCACGTAC +
Preference number: 5 (lower is better)
Translates to: YTNGPTRQKITRQGDFSASLTAQ*SLPLTY
Trigger: GTACGTGAGAGGAAGAGACAATTGTGCTGTCAGGCT...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCTCAGGAATGAATTGGTaGTTCCCTCTTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: NPLPIRKSLNPPITQKALSGMNW*FPLLLG
Trigger: TCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGA...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp GGAGGCAATGCACAAGTGTCGTTATACAAATGGCCCCACCAGGCAGAAAATCACTGGAAATTCCCCAACTaGGCATTGATTCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: GGNAQVSLYKWPHQAENHWKFPN*ALIPWI
Trigger: AATCCAAGGAATCAATGCCAAGTTGGGGAATTTCCA...GTGATTTTCTGCCTGGTGGGGCCATTTGTATAACGACACTTGTGCATTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp CAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTCTTAAGTGCATAGAGGTGTaGTACTGCAAAGATCCAGTC +
Preference number: 5 (lower is better)
Translates to: QMAPPGRKSPDKVISQLLKCIEV*YCKDPV
Trigger: GACTGGATCTTTGCAGTACAACACCTCTATGCACTT...AAGAAGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTTATACCTTCCTCTCTTaGGAATTCAGGCACAGTGGA +
Preference number: 5 (lower is better)
Translates to: YTNGPTRQKITRQGDFSAYTFLS*EFRHSG
Trigger: TCCACTGTGCCTGAATTCCAAAGAGAGGAAGGTATA...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTCTTGGCATTGATTCCTaGGATTTAGACCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: YTNGPTRQKITRQGDFSALGIDS*DLDLLF
Trigger: GAAGAGAAGGTCTAAATCCAAGGAATCAATGCCAAG...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCACTTGGCATTGATTCCTaGGATTTAGACCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSLGIDS*DLDLLF
Trigger: GAAGAGAAGGTCTAAATCCAAGGAATCAATGCCAAG...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp CGTTATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCATGGAAATTCCCCAACTaGGCATTGATTCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: RYTNGPTRQKITRQGDFSWKFPN*ALIPWI
Trigger: AATCCAAGGAATCAATGCCAAGTTGGGGAATTTCCA...TGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTCTGACAAGAGCCACCTaGGGCACATGTTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFLTRAT*GTCSQD
Trigger: ATCCTGAGAACATGTGCCCAAGGTGGCTCTTGTCAG...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp CTGCTTTGCCCCCAAGAAAGCTTATTCTCCAGTATCATCTTCATATaGCACCAAGGAGGTATCAAAACGAAGGAACTTCCCAATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LLCPQESLFSSIIFI*HQGGIKTKELPNGK
Trigger: TTTGCCATTGGGAAGTTCCTTCGTTTTGATACCTCCTTGGTGTCATATGAAGATGATACTGGAGAATAAGCTTTCTTGGGGGCAAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS-3UTR CAA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTGCTTTCAGGAATGAATaGGTTGTTCCCTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSAFRNE*VVPSSP
Trigger: AGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGC...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTCAGATCACATATGGTTaGGATACTAGAAGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSQITYG*DTRRPR
Trigger: TCTGGGCCTTCTAGTATCCAAACCATATGTGATCTG...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp AACCCACTGCCAATCAGAAAATCTTTGAATCCACCTATAACCCAGAAGGCCCTCCAGATTTGTGAATGGTaGACATTTGTTTCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: NPLPIRKSLNPPITQKALQICEW*TFVSGV
Trigger: GACACCTGAAACAAATGTCAACCATTCACAAATCTG...GAGGGCCTTCTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGGCAGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp CCATTTATAATCTCTGCTAAGGGTGGTGGCAGATTTGTGAATGGTTaGCATTTGTTTCAGGTGTCTCTCCTGTTTTATCTGCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: PFIISAKGGGRFVNG*HLFQVSLLFYLLHL
Trigger: GAGATGCAGCAGATAAAACAGGAGAGACACCTGAAACAAATGTCAACCATTCACAAATCTGCCACCACCCTTAGCAGAGATTATAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295208.7
ENST00000411425.1
ENST00000496060.1
CDS-3UTR CAA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCATGGAATAATTCTTCTTaGGAAATTCCCCAACTTGGC +
Preference number: 5 (lower is better)
Translates to: PLHCLTKKGNMCYRERSAWNNSS*EIPQLG
Trigger: GCCAAGTTGGGGAATTTCCAAAGAAGAATTATTCCA...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TATACAAATGGCCCCACCAGGCAGAAAATCACCAGACAAGGTGATTTCTCAGCTACAAAGAGTCTGTTTTaGTTAGTCTTAAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: YTNGPTRQKITRQGDFSATKSLF*LVLRSL
Trigger: CAGAGACCTTAAGACTAACAAAAACAGACTCTTTGT...AGCTGAGAAATCACCTTGTCTGGTGATTTTCTGCCTGGTGGGGCCATTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp GGTACTAGAAAATACCTGGTCTCTGGCATCTGCCTTCTTTCACTTAGAATCACGGGACTTACTGTCATGTaGTTATTGCTACAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: GTRKYLVSGICLLSLRITGLTVM*LLLQRV
Trigger: GACTCTTTGTAGCAATAACAACATGACAGTAAGTCC...CGTGATTCTAAGTGAAAGAAGGCAGATGCCAGAGACCAGGTATTTTCTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp CCACTCCATTGCCTCACAAAGAAAGGTAACATGTGCTACAGAGAAAGAAGTGCAAGACATTCCCTTCTATaGATTCCAGGTCTTTGGATA +
Preference number: 5 (lower is better)
Translates to: PLHCLTKKGNMCYRERSARHSLL*IPGLWI
Trigger: TATCCAAAGACCTGGAATCAATAGAAGGGAATGTCT...TGCACTTCTTTCTCTGTAGCACATGTTACCTTTCTTTGTGAGGCAATGGAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS TCA 90 bp TTCTCATTTCCAACTGGCCAAAGACAATATACATCAGCTTCTGCGTaGCAACAGCTAATTAAAACTCAGCCCATTATCAGGGACCAAATC +
Preference number: 5 (lower is better)
Translates to: FSFPTGQRQYTSASA*QQLIKTQPIIRDQI
Trigger: GATTTGGTCCCTGATAATGGGCTGAGTTTTAATTAGCTGTTGTCACGCAGAAGCTGATGTATATTGTCTTTGGCCAGTTGGAAATGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS TCA 90 bp GCTTATCAATATGAAACTGCTAGGAAATATAATCAGGGTCTCAGGTaGATCAGGCCTACAGAGACATTCTTCTCAGGTGGAGGTAAATGT +
Preference number: 5 (lower is better)
Translates to: AYQYETARKYNQGLR*IRPTETFFSGGGKC
Trigger: ACATTTACCTCCACCTGAGAAGAATGTCTCTGTAGGCCTGATTCACCTGAGACCCTGATTATATTTCCTAGCAGTTTCATATTGATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 90 bp TCCACAATTAAGGCTAAAGAAGGGGGCATATTTCAAAAAGAACTGTaGGTCAAACCACTGACACATGGAGCCAACTGGAAACAAATTCAT +
Preference number: 5 (lower is better)
Translates to: STIKAKEGGIFQKEL*VKPLTHGANWKQIH
Trigger: ATGAATTTGTTTCCAGTTGGCTCCATGTGTCAGTGGTTTGACCCACAGTTCTTTTTGAAATATGCCCCCTTCTTTAGCCTTAATTGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS-3UTR CAA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTTGGAATAATTCTTCTTaGGAAATTCCCCAACTTGGC +
Preference number: 5 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSWNNSS*EIPQLG
Trigger: GCCAAGTTGGGGAATTTCCAAAGAAGAATTATTCCA...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS-3UTR CAA 90 bp GATATGAATTCTTTAAGTTCCAGTGATGTCTGCACTCCAGCTGAAAGCCCTTCTCCAATCAGAAAATCTTaGAATCCACCTATAACCCAG +
Preference number: 5 (lower is better)
Translates to: DMNSLSSSDVCTPAESPSPIRKS*NPPITQ
Trigger: CTGGGTTATAGGTGGATTCAAAGATTTTCTGATTGG...AGAAGGGCTTTCAGCTGGAGTGCAGACATCACTGGAACTTAAAGAATTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp ACATCAGTTTTATTAGCTCTAAAATACGACTGGGCTAGATCATGGGTAGCTGTCATTGATTCCAGGTCTTaGGATAAACCCACTGCCAAT +
Preference number: 5 (lower is better)
Translates to: TSVLLALKYDWARSWVAVIDSRS*DKPTAN
Trigger: ATTGGCAGTGGGTTTATCCAAAGACCTGGAATCAAT...GACAGCTACCCATGATCTAGCCCAGTCGTATTTTAGAGCTAATAAAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS CCA 90 bp TACCATGGCCATCCTGTCCCCATTGCTCATTGTATATTGGATATATaGATTCAGGTAATTGTCCTTTTAGTTTATAGGTATCCAGACCCA +
Preference number: 5 (lower is better)
Translates to: YHGHPVPIAHCILDI*IQVIVLLVYRYPDP
Trigger: TGGGTCTGGATACCTATAAACTAAAAGGACAATTACCTGAATCCATATATCCAATATACAATGAGCAATGGGGACAGGATGGCCATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS-3UTR CAA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTGCTTTCAGGAATGAATaGGTTGTTCCCTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSAFRNE*VVPSSP
Trigger: AGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGC...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp CTGTCATGTTGTTATTGCTACAAAGAGTCTGTTTTTGTTAGTCTTAAGGTCTCTATGACAAGAGAGCATTaGTGTGCAATGGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSCCYCYKESVFVSLKVSMTREH*CAMEAS
Trigger: AGAAGCCTCCATTGCACACAAATGCTCTCTTGTCAT...AGAGACCTTAAGACTAACAAAAACAGACTCTTTGTAGCAATAACAACATGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTCTTAGAATCACGTTTTaGAGATCTGGATTGTGCATA +
Preference number: 5 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFLRITF*RSGLCI
Trigger: TATGCACAATCCAGATCTCAAAAACGTGATTCTAAG...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp AATTATTGCCTGATGTGGAACAAGATGTGGTCTTCCCACATACATTACACCTTTACATTTGCAGTTACTTaGTTTCTGAAGATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: NYCLMWNKMWSSHIHYTFTFAVT*FLKICH
Trigger: ATGGCAGATCTTCAGAAACAAAGTAACTGCAAATGT...AAAGGTGTAATGTATGTGGGAAGACCACATCTTGTTCCACATCAGGCAATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTAAGAGGAGACAGATTTaGGACGAAGACCAGTTACAA +
Preference number: 5 (lower is better)
Translates to: FLSFFSALVLYISSWKGTKRRQI*DEDQLQ
Trigger: TTGTAACTGGTCTTCGTCCAAAATCTGTCTCCTCTT...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS-3UTR CAA 90 bp TTTCTCAGCTTCTTTTCAGCTCTAGTTTTATACATCTCAAGTTGGAAAGGAACTCAGATTTGTGAATGGTaGACATTTGTTTCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: FLSFFSALVLYISSWKGTQICEW*TFVSGV
Trigger: GACACCTGAAACAAATGTCAACCATTCACAAATCTG...AGTTCCTTTCCAACTTGAGATGTATAAAACTAGAGCTGAAAAGAAGCTGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS GCA 72 bp GGTGCGCCCAGCGCGGCGCACTGCTGCCCGGGGTCGTaGTCTTCCCTCGCCAAGTCCGGCCTCCTACCCCCG +
Preference number: 6 (lower is better)
Translates to: GAPSAAHCCPGS*SSLAKSGLLPP
Trigger: CGGGGGTAGGAGGCCGGACTTGGCGAGGGAAGAGCACGACCCCGGGCAGCAGTGCGCCGCGCTGGGCGCACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS GCA 72 bp GGGCCGGCAAACCCCGGTGCGCCCAGCGCGGCGCACTaGTGCCCGGGGTCGTGCTCTTCCCTCGCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: GPANPGAPSAAH*CPGSCSSLAKS
Trigger: GGACTTGGCGAGGGAAGAGCACGACCCCGGGCAGCAGTGCGCCGCGCTGGGCGCACCGGGGTTTGCCGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS GCA 72 bp TCTGTAAGGGGCCGGGGCGCGGGCCCAGTACAGGTCTaGGCGCCCGCAGTCTCCGAACGCTCACAGGACCAG +
Preference number: 6 (lower is better)
Translates to: SVRGRGAGPVQV*APAVSERSQDQ
Trigger: CTGGTCCTGTGAGCGTTCGGAGACTGCGGGCGCGCAGACCTGTACTGGGCCCGCGCCCCGGCCCCTTACAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS GCA 72 bp CCAGGGCCGTTCCAGCAACTCCAAGGCTGGCTGGTGTaGGCTGAAGCTGTCGGGAGTCGGACCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: PGPFQQLQGWLV*AEAVGSRTSCT
Trigger: TGTGCAGCTGGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 72 bp TGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTGGCTaGTGTGCGCTGAAGCTGTCGGGAGTCGGACCAGCT +
Preference number: 6 (lower is better)
Translates to: CSQGRSSNSKAG*CALKLSGVGPA
Trigger: AGCTGGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 72 bp AGCTTGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTaGCTGGTGTGCGCTGAAGCTGTCGGGAGTCGGACC +
Preference number: 6 (lower is better)
Translates to: SLQPGPFQQLQG*LVCAEAVGSRT
Trigger: GGTCCGACTCCCGACAGCTTCAGCGCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 72 bp CTGGAACCCAGCTCCCACGTGGATCCACACGCACAGTaGGCTCAGACTACCAGGAGACACGGCCACAGCCAC +
Preference number: 6 (lower is better)
Translates to: LEPSSHVDPHAQ*AQTTRRHGHSH
Trigger: GTGGCTGTGGCCGTGTCTCCTGGTAGTCTGAGCCCACTGTGCGTGTGGATCCACGTGGGAGCTGGGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295208.7
CDS CCA 72 bp AGGGGAAGCCTTCAGTGGGATTCCCCGGCCTCTTCCTaGGGTCCTCCTGATATCGGGCTCGGTACTAGCTCC +
Preference number: 6 (lower is better)
Translates to: RGSLQWDSPASS*GPPDIGLGTSS
Trigger: GGAGCTAGTACCGAGCCCGATATCAGGAGGACCCCAGGAAGAGGCCGGGGAATCCCACTGAAGGCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS CAA 90 bp TGGGCCTCAGGCATCAATGTCGAAAGCTCTCCGGGTGATTCCAGCTaGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTGGCTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: WASGINVESSPGDSS*QPGPFQQLQGWLVC
Trigger: GCACACCAGCCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCTGGAATCACCCGGAGAGCTTTCGACATTGATGCCTGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 72 bp ATATCGGGCTCGGTACTAGCTCCCCAAGAGGGCTCCTaGCCCTCTGCACGCTCCAGAGCCAAACCTGATGCT +
Preference number: 6 (lower is better)
Translates to: ISGSVLAPQEGS*PSARSRAKPDA
Trigger: AGCATCAGGTTTGGCTCTGGAGCGTGCAGAGGGCCAGGAGCCCTCTTGGGGAGCTAGTACCGAGCCCGATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411425.1
CDS CAA 72 bp GGCATCAATGTCGAAAGCTCTCCGGGTGATTCCAGCTaGCAGCCAGGGCCGTTCCAGCAACTCCAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GINVESSPGDSS*QPGPFQQLQGW
Trigger: CCAGCCTTGGAGTTGCTGGAACGGCCCTGGCTGCAAGCTGGAATCACCCGGAGAGCTTTCGACATTGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS GCA 72 bp AAATATCCACTGACCCTCCCTAAAGAATTGAGCTTCTaGCTCACCCTGCCCCAGGTGGGGCGATGTCATCTG +
Preference number: 6 (lower is better)
Translates to: KYPLTLPKELSF*LTLPQVGRCHL
Trigger: CAGATGACATCGCCCCACCTGGGGCAGGGTGAGGCAGAAGCTCAATTCTTTAGGGAGGGTCAGTGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 72 bp CTCCCAAGACCAAGGGTCCTCACAGTGTCTGTCCAGTaGAATTTCACGACTGTTATGGACCCGGGACTGACT +
Preference number: 6 (lower is better)
Translates to: LPRPRVLTVSVQ*NFTTVMDPGLT
Trigger: AGTCAGTCCCGGGTCCATAACAGTCGTGAAATTCCACTGGACAGACACTGTGAGGACCCTTGGTCTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS GCA 72 bp CAGGTGAGCAAAAGCCTTCAGAGCCAGTGGGGGTTCTaGAATTGTCCTTTCCTGTCTGCCTTGCAAATGGCA +
Preference number: 6 (lower is better)
Translates to: QVSKSLQSQWGF*NCPFLSALQMA
Trigger: TGCCATTTGCAAGGCAGACAGGAAAGGACAATTGCAGAACCCCCACTGGCTCTGAAGGCTTTTGCTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 72 bp TCATCAGGTCCCGAGGCCTGGCTTTCAGGAATGAATTaGTTGTTCCCTCTTCTCCTGGGAATCTCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SSGPEAWLSGMN*LFPLLLGISLE
Trigger: CTCCAGAGAGATTCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS CAA 72 bp TCAGGTCCCGAGGCCTGGCTTTCAGGAATGAATTGGTaGTTCCCTCTTCTCCTGGGAATCTCTCTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: SGPEAWLSGMNW*FPLLLGISLEE
Trigger: TTCCTCCAGAGAGATTCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS CAA 90 bp CAAATGTCATCAGGTCCCGAGGCCTGGCTTTCAGGAATGAATTGGTaGTTCCCTCTTCTCCTGGGAATCTCTCTGGAGGAAGAGCAGGAT +
Preference number: 6 (lower is better)
Translates to: QMSSGPEAWLSGMNW*FPLLLGISLEEEQD
Trigger: ATCCTGCTCTTCCTCCAGAGAGATTCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGATGACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS TCA 72 bp TCCAGTGGAATTTCACGACTGTTATGGACCCGGGACTaGCTCTTCCCATGCTTCCCTCTTCTGCAAAGGAGT +
Preference number: 6 (lower is better)
Translates to: SSGISRLLWTRD*LFPCFPLLQRS
Trigger: ACTCCTTTGCAGAAGAGGGAAGCATGGGAAGAGTCAGTCCCGGGTCCATAACAGTCGTGAAATTCCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 72 bp TCACCCCCTTCCTCCAACTGGCAGATCACATATGGTTaGGATACTAGAAGGCCCAGAATGGCCAAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: SPPSSNWQITYG*DTRRPRMAKFL
Trigger: CAGGAACTTGGCCATTCTGGGCCTTCTAGTATCCAAACCATATGTGATCTGCCAGTTGGAGGAAGGGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295208.7
ENST00000411425.1
ENST00000496060.1
CDS TCA 72 bp AAATGTCATCAGGTCCCGAGGCCTGGCTTTCAGGAATaGATTGGTTGTTCCCTCTTCTCCTGGGAATCTCTC +
Preference number: 6 (lower is better)
Translates to: KCHQVPRPGFQE*IGCSLFSWESL
Trigger: GAGAGATTCCCAGGAGAAGAGGGAACAACCAATTCATTCCTGAAAGCCAGGCCTCGGGACCTGATGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295208.7
ENST00000411425.1
CDS GCA 72 bp CCTCTCTCCTTCCAACGCAAATATGTGTACAAACCCTaGCTGGAACCGCAGCCCTGCTCTCAGAATCAAATT +
Preference number: 6 (lower is better)
Translates to: PLSFQRKYVYKP*LEPQPCSQNQI
Trigger: AATTTGATTCTGAGAGCAGGGCTGCGGTTCCAGGCAGGGTTTGTACACATATTTGCGTTGGAAGGAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447814.1
CDS CCA 72 bp ACACTGGCATCCAGGCCAGGCAGTGAAGAAACTTATTaGCAAGGTGGCAACCCATGTAATTTGGTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: TLASRPGSEETY*QGGNPCNLVVN
Trigger: GTTCACCACCAAATTACATGGGTTGCCACCTTGCCAATAAGTTTCTTCACTGCCTGGCCTGGATGCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS GCA 72 bp GACATTTGTTTCAGGTGTCTCTCCTGTTTTATCTGCTaGATCTCTAACTGGCCATCACAACCGCAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DICFRCLSCFIC*ISNWPSQPQAA
Trigger: AGCAGCCTGCGGTTGTGATGGCCAGTTAGAGATGCAGCAGATAAAACAGGAGAGACACCTGAAACAAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295208.7
ENST00000411425.1
ENST00000496060.1
CDS GCA 72 bp AGCTCTTGGGTTATTTCTCTTGGAGGGCATTTTGTGTaGAGGAGAGAGGGAAGTGAACATCTATGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: SSWVISLGGHFV*RREGSEHLWVR
Trigger: TCTTACCCATAGATGTTCACTTCCCTCTCTCCTGCACACAAAATGCCCTCCAAGAGAAATAACCCAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 72 bp AAGGCTAAAGAAGGGGGCATATTTCAAAAAGAACTGTaGGTCAAACCACTGACACATGGAGCCAACTGGAAA +
Preference number: 6 (lower is better)
Translates to: KAKEGGIFQKEL*VKPLTHGANWK
Trigger: TTTCCAGTTGGCTCCATGTGTCAGTGGTTTGACCCACAGTTCTTTTTGAAATATGCCCCCTTCTTTAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 72 bp TCTTCTTTGGAAATTCCCCAACTTGGCATTGATTCCTaGGATTTAGACCTTCTCTTCCAGTCTGAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: SSLEIPQLGIDS*DLDLLFQSEWA
Trigger: AGCCCACTCAGACTGGAAGAGAAGGTCTAAATCCAAGGAATCAATGCCAAGTTGGGGAATTTCCAAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295208.7
ENST00000411425.1
ENST00000496060.1
CDS CAA 72 bp AATAGGAAATGTCCAGAAATGCTAGGGCTTGCAGGGTaGGAGACAACCAATTCTCATTTCCAACTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: NRKCPEMLGLAG*ETTNSHFQLAK
Trigger: TTTGGCCAGTTGGAAATGAGAATTGGTTGTCTCCAACCCTGCAAGCCCTAGCATTTCTGGACATTTCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 90 bp ATGGAAGGCAATAGGAAATGTCCAGAAATGCTAGGGCTTGCAGGGTaGGAGACAACCAATTCTCATTTCCAACTGGCCAAAGACAATATA +
Preference number: 6 (lower is better)
Translates to: MEGNRKCPEMLGLAG*ETTNSHFQLAKDNI
Trigger: TATATTGTCTTTGGCCAGTTGGAAATGAGAATTGGTTGTCTCCAACCCTGCAAGCCCTAGCATTTCTGGACATTTCCTATTGCCTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS TCA 72 bp GGGTTCTCTGAGAGTTGTTTCCCCCTAAAGTCTGCCTaGATTCTGTATCACATTTATAAGATCCTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: GFSESCFPLKSA*ILYHIYKILLP
Trigger: TGGGAGAAGGATCTTATAAATGTGATACAGAATTCAGGCAGACTTTAGGGGGAAACAACTCTCAGAGAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295208.7
ENST00000411425.1
ENST00000496060.1
CDS TCA 72 bp CCCCAAGAAAGCTTATTCTCCAGTATCATCTTCATATaGCACCAAGGAGGTATCAAAACGAAGGAACTTCCC +
Preference number: 6 (lower is better)
Translates to: PQESLFSSIIFI*HQGGIKTKELP
Trigger: GGGAAGTTCCTTCGTTTTGATACCTCCTTGGTGTCATATGAAGATGATACTGGAGAATAAGCTTTCTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS TCA 72 bp CCAACTGGCCAAAGACAATATACATCAGCTTCTGCGTaGCAACAGCTAATTAAAACTCAGCCCATTATCAGG +
Preference number: 6 (lower is better)
Translates to: PTGQRQYTSASA*QQLIKTQPIIR
Trigger: CCTGATAATGGGCTGAGTTTTAATTAGCTGTTGTCACGCAGAAGCTGATGTATATTGTCTTTGGCCAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS TCA 72 bp TATGAAACTGCTAGGAAATATAATCAGGGTCTCAGGTaGATCAGGCCTACAGAGACATTCTTCTCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: YETARKYNQGLR*IRPTETFFSGG
Trigger: TCCACCTGAGAAGAATGTCTCTGTAGGCCTGATTCACCTGAGACCCTGATTATATTTCCTAGCAGTTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 90 bp GCCCATTATCAGGGACCAAATCATGGATGTGGTTGTCAAACCTTTTaGTTTAAACCTCTGAGTAATTTCAAAAGGCTCCCAGTAAATCTC +
Preference number: 6 (lower is better)
Translates to: AHYQGPNHGCGCQTF*FKPLSNFKRLPVNL
Trigger: GAGATTTACTGGGAGCCTTTTGAAATTACTCAGAGGTTTAAACAAAAAGGTTTGACAACCACATCCATGATTTGGTCCCTGATAATGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 72 bp AAGTGGCTTTATGATGAAACAATAAGTTTTGTGCGTTaGACTAGCATGATCCTTTCCCCCAAAGCCTACTCA +
Preference number: 6 (lower is better)
Translates to: KWLYDETISFVR*TSMILSPKAYS
Trigger: TGAGTAGGCTTTGGGGGAAAGGATCATGCTAGTCAAACGCACAAAACTTATTGTTTCATCATAAAGCCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CAA 90 bp GTAAATCACAAGTGGCTTTATGATGAAACAATAAGTTTTGTGCGTTaGACTAGCATGATCCTTTCCCCCAAAGCCTACTCATTATTCAGT +
Preference number: 6 (lower is better)
Translates to: VNHKWLYDETISFVR*TSMILSPKAYSLFS
Trigger: ACTGAATAATGAGTAGGCTTTGGGGGAAAGGATCATGCTAGTCAAACGCACAAAACTTATTGTTTCATCATAAAGCCACTTGTGATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 72 bp AGAAGAGGCTGGAAACATAACATTAGTAGTGTGAGCTaGTTGTTATTGGCTGAGTTTGACAAAGTATTACAA +
Preference number: 6 (lower is better)
Translates to: RRGWKHNISSVS*LLLAEFDKVLQ
Trigger: TTGTAATACTTTGTCAAACTCAGCCAATAACAACCAGCTCACACTACTAATGTTATGTTTCCAGCCTCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496060.1
CDS CCA 72 bp CATCCTGTCCCCATTGCTCATTGTATATTGGATATATaGATTCAGGTAATTGTCCTTTTAGTTTATAGGTAT +
Preference number: 6 (lower is better)
Translates to: HPVPIAHCILDI*IQVIVLLVYRY
Trigger: ATACCTATAAACTAAAAGGACAATTACCTGAATCCATATATCCAATATACAATGAGCAATGGGGACAGGATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496060.1