RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF512B (Homo sapiens)

Ensembl gene IDs: ENSG00000196700

Ensembl transcript IDs: ENST00000369888.6

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCCCCAGCCTCCATCCTCTCATCAGGCCGAGGTGTGCGTGGGTaGGGGGAGTCCGGGTCTCCACACCCACTCCCTGGCACATCTGGC +
Preference number: 1 (lower is better)
Translates to: SAPASILSSGRGVRG*GESGSPHPLPGTSG
Trigger: GCCAGATGTGCCAGGGAGTGGGTGTGGAGACCCGGACTCCCCCCACCCACGCACACCTCGGCCTGATGAGAGGATGGAGGCTGGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp CTGGGGGTGCTGGAGTTCCAGTGTTGGGTGGAGGTGAGGCCAGGATaGTGGCTGCCCGTGCCAGGTTGCTCAGGTGCCCTCACCAGCCCA +
Preference number: 1 (lower is better)
Translates to: LGVLEFQCWVEVRPG*WLPVPGCSGALTSP
Trigger: TGGGCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTCCACCCAACACTGGAACTCCAGCACCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp GGCACCACACCCTGCAGGTGTTCAGGTCCACCCTCCTCCCGCCATTaGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGC +
Preference number: 1 (lower is better)
Translates to: GTTPCRCSGPPSSRH*WQGQSAPRPPPSAC
Trigger: GCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGTGGACCTGAACACCTGCAGGGTGTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 90 bp CTGTGGCCACCTCTTCCAGGCACCCTGGACTCCCTGCCTGACCCCTaGCCTACCTATAGACCCAGCCGTCCTCAGGGCCACAAAGGGGCA +
Preference number: 1 (lower is better)
Translates to: LWPPLPGTLDSLPDP*PTYRPSRPQGHKGA
Trigger: TGCCCCTTTGTGGCCCTGAGGACGGCTGGGTCTATAGGTAGGGCAGGGGTCAGGCAGGGAGTCCAGGGTGCCTGGAAGAGGTGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp GGGGTGCTGGAGTTCCAGTGTTGGGTGGAGGTGAGGCCAGGATGGTaGCTGCCCGTGCCAGGTTGCTCAGGTGCCCTCACCAGCCCAGAA +
Preference number: 1 (lower is better)
Translates to: GVLEFQCWVEVRPGW*LPVPGCSGALTSPE
Trigger: TTCTGGGCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTCCACCCAACACTGGAACTCCAGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp ACCAAGTGGGTGGCCAAGGGCAGGCCGGAGCCTGTCAGGTCAGCATaGCAGTGGTCAGACAGGGGTCTGTCCTGGGAGGTAGCTGGGGGT +
Preference number: 1 (lower is better)
Translates to: TKWVAKGRPEPVRSA*QWSDRGLSWEVAGG
Trigger: ACCCCCAGCTACCTCCCAGGACAGACCCCTGTCTGACCACTGCCATGCTGACCTGACAGGCTCCGGCCTGCCCTTGGCCACCCACTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp ACCACACCCTGCAGGTGTTCAGGTCCACCCTCCTCCCGCCATTGGTaGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCC +
Preference number: 1 (lower is better)
Translates to: TTPCRCSGPPSSRHW*QGQSAPRPPPSACS
Trigger: GGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGTGGACCTGAACACCTGCAGGGTGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp GGAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTaGGGAGCCCCAACCCAGGTGTGCCCTGTGGCAGCCTTAACAGGG +
Preference number: 1 (lower is better)
Translates to: GGATLLAIALLLGTP*GAPTQVCPVAALTG
Trigger: CCCTGTTAAGGCTGCCACAGGGCACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp CCAGACCCTCTTCTCTTCTCCCCAAGGGCCAAGTACCTGAGAGGCTaGGGCAGGCACCACACCCTGCAGGTGTTCAGGTCCACCCTCCTC +
Preference number: 1 (lower is better)
Translates to: PDPLLFSPRAKYLRG*GRHHTLQVFRSTLL
Trigger: GAGGAGGGTGGACCTGAACACCTGCAGGGTGTGGTGCCTGCCCCAGCCTCTCAGGTACTTGGCCCTTGGGGAGAAGAGAAGAGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR TCA 90 bp TCCCACCCACCCTGGAAAATGGCCTCCCTCCAAACCTACCCCCTCTaGGCCTCATCCTCCCTGCAATGCCGTGGTTGGAAGGCAGGACCC +
Preference number: 1 (lower is better)
Translates to: SHPPWKMASLQTYPL*ASSSLQCRGWKAGP
Trigger: GGGTCCTGCCTTCCAACCACGGCATTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTGGAGGGAGGCCATTTTCCAGGGTGGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 90 bp AAATGGCCTCCCTCCAAACCTACCCCCTCTGAGCCTCATCCTCCCTaGAATGCCGTGGTTGGAAGGCAGGACCCCAGGGAGGGAGCCACA +
Preference number: 1 (lower is better)
Translates to: KWPPSKPTPSEPHPP*NAVVGRQDPREGAT
Trigger: TGTGGCTCCCTCCCTGGGGTCCTGCCTTCCAACCACGGCATTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTGGAGGGAGGCCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp GAGCCTGTCAGGTCAGCATGGCAGTGGTCAGACAGGGGTCTGTCCTaGGAGGTAGCTGGGGGTGCTGGAGTTCCAGTGTTGGGTGGAGGT +
Preference number: 1 (lower is better)
Translates to: EPVRSAWQWSDRGLS*EVAGGAGVPVLGGG
Trigger: ACCTCCACCCAACACTGGAACTCCAGCACCCCCAGCTACCTCCCAGGACAGACCCCTGTCTGACCACTGCCATGCTGACCTGACAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp ATAGACCCAGCCGTCCTCAGGGCCACAAAGGGGCAAAGACAGCTCTaGAGCTGCCATCAACCTGCTGTGACTTTGGCCAAGCCCCTCCCC +
Preference number: 1 (lower is better)
Translates to: IDPAVLRATKGQRQL*SCHQPAVTLAKPLP
Trigger: GGGGAGGGGCTTGGCCAAAGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCTGAGGACGGCTGGGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp ACTCCCTGGCACATCTGGCAAGGGCTGCTGAGGGTTGGAGCCTTCTaGCCCAAGGATGAAGCCAGAGACAGGAAGTGTTCTGCAACCCCA +
Preference number: 1 (lower is better)
Translates to: TPWHIWQGLLRVGAF*PKDEARDRKCSATP
Trigger: TGGGGTTGCAGAACACTTCCTGTCTCTGGCTTCATCCTTGGGCCAGAAGGCTCCAACCCTCAGCAGCCCTTGCCAGATGTGCCAGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR TCA 90 bp CATCTGGCAAGGGCTGCTGAGGGTTGGAGCCTTCTGGCCCAAGGATaGAGCCAGAGACAGGAAGTGTTCTGCAACCCCAGTCCCCAAAGT +
Preference number: 1 (lower is better)
Translates to: HLARAAEGWSLLAQG*SQRQEVFCNPSPQS
Trigger: ACTTTGGGGACTGGGGTTGCAGAACACTTCCTGTCTCTGGCTTCATCCTTGGGCCAGAAGGCTCCAACCCTCAGCAGCCCTTGCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 90 bp ATGAAGCCAGAGACAGGAAGTGTTCTGCAACCCCAGTCCCCAAAGTaGTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: MKPETGSVLQPQSPK*SWNLSPYYCRPSPV
Trigger: CACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGCACTTTGGGGACTGGGGTTGCAGAACACTTCCTGTCTCTGGCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 90 bp CATCAAGGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTaGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAAAAACCAG +
Preference number: 1 (lower is better)
Translates to: HQGIQDSSSHTRDYL*ALGVSRKLTPSKNQ
Trigger: CTGGTTTTTGCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACCTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGGTGTGGCGGCTGCATaGGGGCCAGGCCCCACGCAC +
Preference number: 2 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRGVAAA*GPGPTH
Trigger: GTGCGTGGGGCCTGGCCCCCATGCAGCCGCCACACC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGATGGTGGCTGCCCGTaGCAGGTTGCTCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRDGGCP*QVAQVP
Trigger: GGGCACCTGAGCAACCTGGCACGGGCAGCCACCATC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCGGCTGGCTGCCCCACTaGACGGATGAAGAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTGWLPH*TDEEAG
Trigger: CCCCGCCTCTTCATCCGTCCAGTGGGGCAGCCAGCC...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTATCGTCCAGGGTCAGTaGGGCCGAGCCCTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPIVQGQ*GRALSP
Trigger: TGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGAT...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGCCATCTGCCTACTCTaGGCTGCAGCCCCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPAICLL*AAAPVA
Trigger: TGCCACAGGGGCTGCAGCGCAGAGTAGGCAGATGGC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGGCCAAAGGCCATCTaGCTACTCTGCGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGPKAI*LLCAAA
Trigger: GGCTGCAGCGCAGAGTAGGCAGATGGCCTTTGGCCC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGTGAGGCCAGGATGGTaGCTGCCCGTGCCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFVRPGW*LPVPGC
Trigger: GCAACCTGGCACGGGCAGCCACCATCCTGGCCTCAC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCTGCCTACTCTGCGCTaGAGCCCCTGTGGCACCAAG +
Preference number: 2 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTLPTLR*SPCGTK
Trigger: CTTGGTGCCACAGGGGCTGCAGCGCAGAGTAGGCAG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGAGGTAGCTGGGGGTaGTGGAGTTCCAGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGGSWG*WSSSVG
Trigger: CCCAACACTGGAACTCCAGCACCCCCAGCTACCTCC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTTGGCAGACAGAAGGCTaGCTTTCCCCCAGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPWQTEG*LSPSGH
Trigger: GTGGCCACTGGGGGAAAGGCAGCCTTCTGTCTGCCA...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGTGCCCAGTCAGTACTaGCTCCCTGAGCAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPVPSQY*LPEQQG
Trigger: CCCTTGCTGCTCAGGGAGGCAGTACTGACTGGGCAC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCAGCAGGGATCGCACTaGCAAAGGAGGAGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFQQGSH*QRRSRG
Trigger: ACCCCTGCTCCTCCTTTGTCAGTGCGATCCCTGCTG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGGAGAGTGGCTGGCTaGCCCACTGGACGGATGAAG +
Preference number: 2 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGRVAG*PTGRMK
Trigger: CTTCATCCGTCCAGTGGGGCAGCCAGCCACTCTCCC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGAACAGAGGGCGGTGTaGCGGCTGCATGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTEQRAV*RLHGGQ
Trigger: CTGGCCCCCATGCAGCCGCCACACCGCCCTCTGTTC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCGGTAGCTGGGGGTGCTaGAGTTCCAGTGTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTGSWGC*SSSVGW
Trigger: CCACCCAACACTGGAACTCCAGCACCCCCAGCTACC...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGAGCTGGCCCTGCCTTaGACAGAGGGCGGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVELALP*TEGGVA
Trigger: CGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCAAACCTACCCCCTCTaGGCCTCATCCTCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTQTYPL*ASSSLQ
Trigger: TTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTCTGGCAAGGGCTGCTaGGGGTTGGAGCCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSSGKGC*GLEPSG
Trigger: GCCAGAAGGCTCCAACCCTCAGCAGCCCTTGCCAGA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTCCCGGAGCTGGCCCTaGCTTGAACAGAGGGCGGTG +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLSRSWP*LEQRAV
Trigger: CACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCCTGCCCGTGCCAGGTTaGTCAGGTGCCCTCACCAGC +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLLPVPG*SGALTS
Trigger: GCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAG...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGGCCAGGATGGTGGCTaGCCGTGCCAGGTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLGQDGG*PCQVAQ
Trigger: CTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGAGGTGAGGCCAGGATaGTGGCTGCCCGTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTEVRPG*WLPVPG
Trigger: ACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGCAGTGCCAGAAGGCTaGACACTGGAGGAGAGCACA +
Preference number: 2 (lower is better)
Translates to: SHESLATGPTQIGRQKAAAVPEG*TLEEST
Trigger: TGTGCTCTCCTCCAGTGTTCAGCCTTCTGGCACTGC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCTGGCTATTGCACTTCTaGTGGGCACACCTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFWLLHF*WAHLGE
Trigger: CTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCA...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTCTCTGCCCAGCTTCCTaGCCCACATGCCTATGGGCC +
Preference number: 2 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTLCPAS*PTCLWA
Trigger: GGCCCATAGGCATGTGGGGCAGGAAGCTGGGCAGAG...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGAGCCAGGCCAGCTCTaGCCAGCTTCCTGCCCCACA +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVEPGQL*PASCPT
Trigger: TGTGGGGCAGGAAGCTGGGCAGAGCTGGCCTGGCTC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTAGACAGCTCTGGAGCTaGCATCAACCTGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPRQLWS*HQPAVT
Trigger: AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCT...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTCCCTGCCTGACCCCTaGCCTACCTATAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSSLPDP*PTYRPS
Trigger: GCTGGGTCTATAGGTAGGGCAGGGGTCAGGCAGGGA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTCAGAGGTCCCGGAGCTaGCCCTGCCTTGAACAGAGG +
Preference number: 2 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTQRSRS*PCLEQR
Trigger: CCTCTGTTCAAGGCAGGGCCAGCTCCGGGACCTCTG...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGGAAGGGAGAGTGGCTaGCTGCCCCACTGGACGGAT +
Preference number: 2 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTGRESG*LPHWTD
Trigger: ATCCGTCCAGTGGGGCAGCCAGCCACTCTCCCTTCC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCTATTGCACTTCTGCTaGGCACACCTTGGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SHESLATGPTQIGRQKAALLHFC*AHLGEP
Trigger: GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGCGCTGCAGCCCCTGTaGCACCAAGACCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVALQPL*HQDPRH
Trigger: GTGTCTGGGGTCTTGGTGCCACAGGGGCTGCAGCGC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGACAGGGGTCTGTCCTaGGAGGTAGCTGGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLDRGLS*EVAGGA
Trigger: AGCACCCCCAGCTACCTCCCAGGACAGACCCCTGTC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAATTACAGACAGGCCTaGGGGGCAGGGCCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSNYRQA*GAGPEH
Trigger: GTGCTCAGGCCCTGCCCCCCAGGCCTGTCTGTAATT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGCATCAAGCTTCTGCTaGCCTGTAGGTACAAGAAGC +
Preference number: 2 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPASSFC*PVGTRS
Trigger: GCTTCTTGTACCTACAGGGCAGCAGAAGCTTGATGC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCTCTTCCAGGCACCCTaGACTCCCTGCCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVLFQAP*TPCLTP
Trigger: AGGGGTCAGGCAGGGAGTCCAGGGTGCCTGGAAGAG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CAA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTaGGGAGTGTCCCGGAAACTCACCCCCAGCAAAAACCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWA*GVSRKLTPSKNQTL
Trigger: GAGGGTCTGGTTTTTGCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGGCCATCAACCTGCTGTaGCTTTGGCCAAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVAINLL*LWPSPS
Trigger: GGAGGGGCTTGGCCAAAGTCACAGCAGGTTGATGGC...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTCCCTTGCCCCAAGCTaGGAGAATTACAGACAGGCC +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLSLAPS*ENYRQA
Trigger: GGCCTGTCTGTAATTCTCCCAGCTTGGGGCAAGGGA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTGGGCCTACCCAGATTaGCAGACAGAAGGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLWAYPD*QTEGCL
Trigger: AAGGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCTGCAATGCCGTGGTTaGAAGGCAGGACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVLQCRG*KAGPQG
Trigger: TCCCTGGGGTCCTGCCTTCCAACCACGGCATTGCAG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCTCCCTGCAATGCCGTaGTTGGAAGGCAGGACCCCA +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVLPAMP*LEGRTP
Trigger: TGGGGTCCTGCCTTCCAACCACGGCATTGCAGGGAG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCACCCACCCTGGAAAATaGCCTCCCTCCAAACCTACC +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLTHPGK*PPSKPT
Trigger: GGTAGGTTTGGAGGGAGGCCATTTTCCAGGGTGGGT...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGGGCTGGCAGCTGTGTTaGAGGGCATCAAGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVGWQLC*RASSFC
Trigger: GCAGAAGCTTGATGCCCTTCAACACAGCTGCCAGCC...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGCAAAACCCCTCCCTTaGCCCAAGCTGGGAGAATTA +
Preference number: 2 (lower is better)
Translates to: NIKILIVQGQWGRALSPLAKPLP*PKLGEL
Trigger: TAATTCTCCCAGCTTGGGGCAAGGGAGGGGTTTTGC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCCCCAGTCCCCAAAGTaGTCCTGGAACTTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVPQSPK*SWNLSP
Trigger: GGGAGACAAGTTCCAGGAGCACTTTGGGGACTGGGG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCAGAAGGCTGAACACTaGAGGAGAGCACACTCCAGG +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVQKAEH*RRAHSR
Trigger: CCTGGAGTGTGCTCTCCTCCAGTGTTCAGCCTTCTG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGAACCTAGGCCTGCAGTaGCAGAAGGCTGAACACTGG +
Preference number: 2 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVNLGLQ*QKAEHW
Trigger: CCAGTGTTCAGCCTTCTGGCACTGCAGGCCTAGGTT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGAGACAGGAAGTGTTCTaGAACCCCAGTCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVRQEVF*NPSPQS
Trigger: ACTTTGGGGACTGGGGTTGCAGAACACTTCCTGTCT...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR TCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGAGTTCCCATATCAAATaGCCACACAACCAGAAACAA +
Preference number: 2 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVSSHIK*PHNQKQ
Trigger: TTGTTTCTGGTTGTGTGGTCATTTGATATGGGAACT...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR TCA 72 bp TCTGGGACACAGGAAGGAATGCCTCCCCCGACCCTCTaGCGCTGGGTCACGCCCATCTCTGCCCCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: SGTQEGMPPPTL*RWVTPISAPAS
Trigger: GGAGGCTGGGGCAGAGATGGGCGTGACCCAGCGTCAGAGGGTCGGGGGAGGCATTCCTTCCTGTGTCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 72 bp TGCCCTCACCAGCCCAGAACCACAGGTCACCAGGGATaGCTGAGCCTTGGGGTAGCCAGGGAAGGGACCCGG +
Preference number: 3 (lower is better)
Translates to: CPHQPRTTGHQG*LSLGVAREGTR
Trigger: CCGGGTCCCTTCCCTGGCTACCCCAAGGCTCAGGCATCCCTGGTGACCTGTGGTTCTGGGCTGGTGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 72 bp GCCAGGATGGTGGCTGCCCGTGCCAGGTTGCTCAGGTaGCCTCACCAGCCCAGAACCACAGGTCACCAGGGA +
Preference number: 3 (lower is better)
Translates to: ARMVAARARLLR*PHQPRTTGHQG
Trigger: TCCCTGGTGACCTGTGGTTCTGGGCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 72 bp GAGGTGAGGCCAGGATGGTGGCTGCCCGTGCCAGGTTaGTCAGGTGCCCTCACCAGCCCAGAACCACAGGTC +
Preference number: 3 (lower is better)
Translates to: EVRPGWWLPVPG*SGALTSPEPQV
Trigger: GACCTGTGGTTCTGGGCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp CCCTGCAGGTGTTCAGGTCCACCCTCCTCCCGCCATTaGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: PCRCSGPPSSRH*WQGQSAPRPPP
Trigger: GGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGTGGACCTGAACACCTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp GAGTTCCAGTGTTGGGTGGAGGTGAGGCCAGGATGGTaGCTGCCCGTGCCAGGTTGCTCAGGTGCCCTCACC +
Preference number: 3 (lower is better)
Translates to: EFQCWVEVRPGW*LPVPGCSGALT
Trigger: GGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTCCACCCAACACTGGAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp CTGGAGTTCCAGTGTTGGGTGGAGGTGAGGCCAGGATaGTGGCTGCCCGTGCCAGGTTGCTCAGGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: LEFQCWVEVRPG*WLPVPGCSGAL
Trigger: GAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTCCACCCAACACTGGAACTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp GTGGCCAAGGGCAGGCCGGAGCCTGTCAGGTCAGCATaGCAGTGGTCAGACAGGGGTCTGTCCTGGGAGGTA +
Preference number: 3 (lower is better)
Translates to: VAKGRPEPVRSA*QWSDRGLSWEV
Trigger: TACCTCCCAGGACAGACCCCTGTCTGACCACTGCCATGCTGACCTGACAGGCTCCGGCCTGCCCTTGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGAGCTGGCCCTGCCTaGAACAGAGGGCGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGAGPA*NRGRCG
Trigger: GCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 72 bp CCCTCCAAACCTACCCCCTCTGAGCCTCATCCTCCCTaGAATGCCGTGGTTGGAAGGCAGGACCCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: PSKPTPSEPHPP*NAVVGRQDPRE
Trigger: CTCCCTGGGGTCCTGCCTTCCAACCACGGCATTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR GCA 72 bp AGCTCCACCAGTGAAGCTCTGGGACACAGGAAGGAATaGCTCCCCCGACCCTCTGACGCTGGGTCACGCCCA +
Preference number: 3 (lower is better)
Translates to: SSTSEALGHRKE*LPRPSDAGSRP
Trigger: TGGGCGTGACCCAGCGTCAGAGGGTCGGGGGAGGCATTCCTTCCTGTGTCCCAGAGCTTCACTGGTGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp TGCAGGTGTTCAGGTCCACCCTCCTCCCGCCATTGGTaGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGT +
Preference number: 3 (lower is better)
Translates to: CRCSGPPSSRHW*QGQSAPRPPPS
Trigger: ACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGTGGACCTGAACACCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp CGGGCAAACATCAAAATTCTCATCGTCCAGGGTCAGTaGGGCCGAGCCCTCAGCCCACTCCCACCCACCCTG +
Preference number: 3 (lower is better)
Translates to: RANIKILIVQGQ*GRALSPLPPTL
Trigger: CAGGGTGGGTGGGAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGGGCTGGCAGCTGTGTaGAAGGGCATCAAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFGLAAV*KGIKLL
Trigger: CAGAAGCTTGATGCCCTTCAACACAGCTGCCAGCCC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp AGGTCAGCATGGCAGTGGTCAGACAGGGGTCTGTCCTaGGAGGTAGCTGGGGGTGCTGGAGTTCCAGTGTTG +
Preference number: 3 (lower is better)
Translates to: RSAWQWSDRGLS*EVAGGAGVPVL
Trigger: CAACACTGGAACTCCAGCACCCCCAGCTACCTCCCAGGACAGACCCCTGTCTGACCACTGCCATGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR TCA 72 bp CCCTGGAAAATGGCCTCCCTCCAAACCTACCCCCTCTaGGCCTCATCCTCCCTGCAATGCCGTGGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: PWKMASLQTYPL*ASSSLQCRGWK
Trigger: CTTCCAACCACGGCATTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTGGAGGGAGGCCATTTTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp GCCGTCCTCAGGGCCACAAAGGGGCAAAGACAGCTCTaGAGCTGCCATCAACCTGCTGTGACTTTGGCCAAG +
Preference number: 3 (lower is better)
Translates to: AVLRATKGQRQL*SCHQPAVTLAK
Trigger: CTTGGCCAAAGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCTGAGGACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp ATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTaGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGC +
Preference number: 3 (lower is better)
Translates to: IQDSSSHTRDYL*ALGVSRKLTPS
Trigger: GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR-3UTR CAA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGACCCTCCTCCCGCCATaGGTGGCAAGGACAAAGTGC +
Preference number: 3 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVTLLPP*VARTKC
Trigger: GCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CCA 72 bp ACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTaGGAGTGTCCCGGAAACTCACCCCCAGCAAAAACC +
Preference number: 3 (lower is better)
Translates to: TPLPTPGIICGL*ECPGNSPPAKT
Trigger: GGTTTTTGCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGGAGCTGGCCCTGCCTTaGACAGAGGGCGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGELALP*TEGGVA
Trigger: CGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTC...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGGCTGGGGGTTCAGCGTaGGGAGCCCTGGTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGAGGSA*GALVEC
Trigger: ACACTCGACCAGGGCTCCCCACGCTGAACCCCCAGC...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCAGGGCCACCTGGAGCTaGGTGGGCCACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPRATWS*VGHRGR
Trigger: CCGGCCCCTGTGGCCCACCCAGCTCCAGGTGGCCCT...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGCAGCGTGGGGAGCCCTaGTCGAGTGTAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGQRGEP*SSVVEP
Trigger: CGGCTCAACTACACTCGACCAGGGCTCCCCACGCTG...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGCAGCAGGGATCGCACTaGCAAAGGAGGAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGQQGSH*QRRSRG
Trigger: ACCCCTGCTCCTCCTTTGTCAGTGCGATCCCTGCTG...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGGGAGGTAGCTGGGGGTaGTGGAGTTCCAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGGGSWG*WSSSVG
Trigger: CCCAACACTGGAACTCCAGCACCCCCAGCTACCTCC...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGTCCCTGCCTGACCCCTaGCCTACCTATAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGSLPDP*PTYRPS
Trigger: GCTGGGTCTATAGGTAGGGCAGGGGTCAGGCAGGGA...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGTACTTCCCTGCCAGGTaGGCCCCCTTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGYFPAR*APLLQL
Trigger: CAGCTGCAGTAAGGGGGCCCACCTGGCAGGGAAGTA...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGGCAGGCCAAGCCCAGTaGGGCCCCTTCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTAGQAQ*GPFSLG
Trigger: CCCCAGGGAGAAGGGGCCCCACTGGGCTTGGCCTGC...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCTCTCGCGCTCCTCCTaGTCGCCCCCTTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTLSRSS*SPPSEA
Trigger: GGCCTCCGAAGGGGGCGAGCAGGAGGAGCGCGAGAG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCCACCTTCCGGCCGGTaGAGCCCCGGGCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAPPSGR*SPGPPC
Trigger: ACAAGGGGGCCCGGGGCTCCACCGGCCGGAAGGTGG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGTGTGGCGGCTGCATaGGGGCCAGGCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGVAAA*GPGPTH
Trigger: GTGCGTGGGGCCTGGCCCCCATGCAGCCGCCACACC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CAA 72 bp GGAGGTGAGGCCAGGATGGTGGCTGCCCGTGCCAGGTaGCTCAGGTGCCCTCACCAGCCCAGAACCACAGGT +
Preference number: 4 (lower is better)
Translates to: GGEARMVAARAR*LRCPHQPRTTG
Trigger: ACCTGTGGTTCTGGGCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCGAGAGTCTTCCGGGTaGCCACGTTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTRESSG*PRCRWG
Trigger: GCCCCACCTGCAACGTGGTCACCCGGAAGACTCTCG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCCTCCCCCGACCCTCTaGCGCTGGGTCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAPPPTL*RWVTPI
Trigger: GATGGGCGTGACCCAGCGTCAGAGGGTCGGGGGAGG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGCCAGGCGATCTGAGATaGCACCCCCTTGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRPGDLR*HPLGTA
Trigger: AGCGGTGCCAAGGGGGTGCCATCTCAGATCGCCTGG...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTCTCTTCAGGGCCACCTaGAGCTGGGTGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPLFRAT*SWVGHR
Trigger: CCTGTGGCCCACCCAGCTCCAGGTGGCCCTGAAGAG...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGCGGACACGCCCGCTTaGGGTCCGCTCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCADTPA*GPLHTQ
Trigger: CTGGGTGTGGAGCGGACCCCAAGCGGGCGTGTCCGC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTCCTTCATGCGCCGCTTaGTCCAGTCGCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPPSCAA*SSRGPA
Trigger: AGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGG...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCTGCTGGGCACACCTTaGGGAGCCCCAACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTLLGTP*GAPTQV
Trigger: CACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGGAGGTGAGGCCAGGATaGTGGCTGCCCGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTEVRPG*WLPVPG
Trigger: ACCTGGCACGGGCAGCCACCATCCTGGCCTCACCTC...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGACCAGGGATTATCTGTaGGCTTTGGGAGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGTRDYL*ALGVSR
Trigger: CCGGGACACTCCCAAAGCCCACAGATAATCCCTGGT...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGAGTCGTTGGGACAGTTaGCGTGGCCTTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGSRWDS*RGLSPS
Trigger: TGAAGGAGAAAGGCCACGTCAACTGTCCCAACGACT...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGTGGCGAGATGAGCCTTaGGTCCGGACACGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRWRDEP*VRTRWS
Trigger: ACTCCAGCGTGTCCGGACTCAAGGCTCATCTCGCCA...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCTCCCGGGACCACTCTTaGTGGACCCCGGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAASRDHS*WTPGAD
Trigger: GTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGA...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGACCTCCTTTCGGCTaGCATCCTTCCCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGPPFG*HPSRDH
Trigger: GTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCGGGGACGCAGGGCCTaGAGCCTTCAGTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFRGRRA*SLQCLH
Trigger: ATGGAGGCACTGAAGGCTGCAGGCCCTGCGTCCCCG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCTCCCGGAGCTGGCCCTaGCTTGAACAGAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFSRSWP*LEQRAV
Trigger: CACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGA...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCTGCCTACTCTGCGCTaGAGCCCCTGTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPLPTLR*SPCGTK
Trigger: CTTGGTGCCACAGGGGCTGCAGCGCAGAGTAGGCAG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGGCCAGGATGGTGGCTaGCCGTGCCAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFGQDGG*PCQVAQ
Trigger: CTGAGCAACCTGGCACGGGCAGCCACCATCCTGGCC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCCGGGACCACTCTTGCTaGACCCCGGGAGCCGACGGC +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSRDHSC*TPGADG
Trigger: GCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCG...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCCGAGCTCTGGCCCATaGAGGAGGGGCCGTACTCCC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCPSSGP*RRGRTP
Trigger: GGGAGTACGGCCCCTCCTCCATGGGCCAGAGCTCGG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGGTGTCTGCACTCAGCTaGAAGGCCGAGCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTVSALS*KAELWP
Trigger: GGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACAC...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGCTTCCCCGCGCTCATaGATGGCCCTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFASPRS*MALCHC
Trigger: GCAGTGGCAGAGGGCCATCCATGAGCGCGGGGAAGC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGAACAGAGGGCGGTGTaGCGGCTGCATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAEQRAV*RLHGGQ
Trigger: CTGGCCCCCATGCAGCCGCCACACCGCCCTCTGTTC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCGACAGGGGTCTGTCCTaGGAGGTAGCTGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPDRGLS*EVAGGA
Trigger: AGCACCCCCAGCTACCTCCCAGGACAGACCCCTGTC...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCTCTTCCAGGCACCCTaGACTCCCTGCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTLFQAP*TPCLTP
Trigger: AGGGGTCAGGCAGGGAGTCCAGGGTGCCTGGAAGAG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTAGGACCGGGGACAGATaGTCACAAGGCGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCRTGDR*SQGGRG
Trigger: GCCCCGCCCGCCTTGTGACCATCTGTCCCCGGTCCT...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CAA 72 bp AACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTaGGGGAGCCCCAACCCAGGTGTGCCCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NPPGYCTSAGHT*GSPNPGVPCGS
Trigger: GCTGCCACAGGGCACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGAGCCCAAAGGTCCCTaGGATGGATGGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFEPKGP*DGWLLP
Trigger: GGGGAGCAGCCATCCATCTCAGGGACCTTTGGGCTC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCTGCAGCTGGCGAGATaGGCCTTGAGTCCGGACACG +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFLQLAR*ALSPDT
Trigger: CGTGTCCGGACTCAAGGCTCATCTCGCCAGCTGCAG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCCAGACACATTCCCATaGGGAGGGGCAACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTPDTFP*GGATLL
Trigger: CAGGAGGGTTGCCCCTCCTCATGGGAATGTGTCTGG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCGCCACTGCTGGTGTCTaGACTCAGCTGGAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPATAGV*TQLEGR
Trigger: TCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGC...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGGTGCTGGCACTTGAGTaGATCCTGAAGCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGVLALE*ILKLLT
Trigger: TGTCAGAAGCTTCAGGATGCACTCAAGTGCCAGCAC...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGGTGGGCCCCCTTACTaGAGCTGGCGAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFGGPPY*SWRDEP
Trigger: AGGCTCATCTCGCCAGCTGCAGTAAGGGGGCCCACC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGAGGCCCCACGCACCATaGTCACTTTTCAGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRRPHAP*SLFRRL
Trigger: AAGGCGCCTGAAAAGTGAGCATGGTGCGTGGGGCCT...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCGGGCCAAAGGCCATCTaGCTACTCTGCGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTGPKAI*LLCAAA
Trigger: GGCTGCAGCGCAGAGTAGGCAGATGGCCTTTGGCCC...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGCCAGGTTGCTCAGGTaGCCTCACCAGCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFARLLR*PHQPRT
Trigger: GGTTCTGGGCTGGTGAGGGCACCTGAGCAACCTGGC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCTCTGCCCAGCTTCCTaGCCCACATGCCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFLCPAS*PTCLWA
Trigger: GGCCCATAGGCATGTGGGGCAGGAAGCTGGGCAGAG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGAGCCAGGCCAGCTCTaGCCAGCTTCCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAEPGQL*PASCPT
Trigger: TGTGGGGCAGGAAGCTGGGCAGAGCTGGCCTGGCTC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCCCAGGCCCACCGTCTaGACCAGGAAACCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPPRPTV*TRKPLA
Trigger: TGCTAAGGGTTTCCTGGTGCAGACGGTGGGCCTGGG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGAGACAGGAAGTGTTCTaGAACCCCAGTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGRQEVF*NPSPQS
Trigger: ACTTTGGGGACTGGGGTTGCAGAACACTTCCTGTCT...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCAAGCAGAGAGGGGCCTaGCCGGGCACTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTKQRGA*PGTVCP
Trigger: TGGACAGACAGTGCCCGGCCAGGCCCCTCTCTGCTT...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGACAGGTTTGGTGACTaGCACGGGCCTAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPDRFGD*HGPSDR
Trigger: CCGGTCACTAGGCCCGTGCCAGTCACCAAACCTGTC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTCCTGGCCTGCTTGGGTaGAATTGGGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPPGLLG*NWAGVQ
Trigger: CTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGG...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCTGGCCTGGCCTGCTTaGGTGGAATTGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPLAWPA*VELGRC
Trigger: ACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCCCCGCGCTCATGGATaGCCCTCTGCCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTPRAHG*PSATAL
Trigger: AAGAGCAGTGGCAGAGGGCCATCCATGAGCGCGGGG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCTACGTCTTGCCACAGTaGGTGCAGGGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPYVLPQ*VQGKEG
Trigger: CCCCTCCTTCCCCTGCACCCACTGTGGCAAGACGTA...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTGGAACACCGCCACCTaGGCCGACGTGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSWNTAT*ADVRRT
Trigger: TGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCATGCCTCTAGCAGCTaGGGGTTCAGCGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTHASSS*GFSVGS
Trigger: GCTCCCCACGCTGAACCCCCAGCTGCTAGAGGCATG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGGCCACAGGCTCCTCTaGGGTCCGCTCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAGHRLL*GPLLGL
Trigger: AAGCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGGAAGGGAGAGTGGCTaGCTGCCCCACTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFGRESG*LPHWTD
Trigger: ATCCGTCCAGTGGGGCAGCCAGCCACTCTCCCTTCC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGTAGCTGGGGGTGCTaGAGTTCCAGTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGSWGC*SSSVGW
Trigger: CCACCCAACACTGGAACTCCAGCACCCCCAGCTACC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCTGCAATGCCGTGGTTaGAAGGCAGGACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTLQCRG*KAGPQG
Trigger: TCCCTGGGGTCCTGCCTTCCAACCACGGCATTGCAG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGCTGGTAATGGTACTTaGGCCCGTAGATGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRAGNGT*ARRCWG
Trigger: TCCCCAGCATCTACGGGCTCAAGTACCATTACCAGC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGGCAGTGCTGGCACTTaGGTGCATCCTGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRGSAGT*VHPEAS
Trigger: AGAAGCTTCAGGATGCACTCAAGTGCCAGCACTGCC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGTACTGGTAGCCCATaGGGCTGGAGAAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGTGSP*GWRRQP
Trigger: GGGCTGCCTTCTCCAGCCTCATGGGCTACCAGTACC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGCGCCACTCTCAGAACTaGACTCCTTCGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRRHSQN*TPSDTA
Trigger: TGCTGTGTCCGAAGGAGTTCAGTTCTGAGAGTGGCG...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGGAGGTGGGTCTGCTaGTGTTCGGAACCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGRWVC*CSEPVL
Trigger: GAGAACTGGTTCCGAACATCAGCAGACCCACCTCCC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGCAGTGCCAGAAGGCTaGACACTGGAGGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPAVPEG*TLEEST
Trigger: TGTGCTCTCCTCCAGTGTTCAGCCTTCTGGCACTGC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCTCTGGCAAGGGCTGCTaGGGGTTGGAGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAASGKGC*GLEPSG
Trigger: GCCAGAAGGCTCCAACCCTCAGCAGCCCTTGCCAGA...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGCCTGAGATGGATGGCTaGTCCCCTGTAAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGPEMDG*SPVNFL
Trigger: CAAAAAGTTTACAGGGGAGCAGCCATCCATCTCAGG...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGCCACAGGGGCCGGTaGCTCCTTGCTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGHRGR*LLADSD
Trigger: ATCACTGTCAGCAAGGAGGCACCGGCCCCTGTGGCC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGCTTTGGACTTGAACTaGTTCCGGCAGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRALDLN*FRQCWH
Trigger: GTGCCAGCACTGCCGGAAGCAGTTCAAGTCCAAAGC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGAGTGTAGTTGAGCCGTaGGGTCTCGGGCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTSVVEP*GLGHKV
Trigger: GACCTTGTGCCCGAGACCGCACGGCTCAACTACACT...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGCCATCTGCCTACTCTaGGCTGCAGCCCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCAICLL*AAAPVA
Trigger: TGCCACAGGGGCTGCAGCGCAGAGTAGGCAGATGGC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCACAGGTCACCAGGGATaGCTGAGCCTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFTGHQG*LSLGVA
Trigger: GGCTACCCCAAGGCTCAGGCATCCCTGGTGACCTGT...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCGAGCCTCATCCTCCCTaGAATGCCGTGGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPEPHPP*NAVVGR
Trigger: CCTTCCAACCACGGCATTGCAGGGAGGATGAGGCTC...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCCCCAGTCCCCAAAGTaGTCCTGGAACTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPPQSPK*SWNLSP
Trigger: GGGAGACAAGTTCCAGGAGCACTTTGGGGACTGGGG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGCAGGCACCACACCCTaGAGGTGTTCAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAAGTTP*RCSGPP
Trigger: GGGTGGACCTGAACACCTGCAGGGTGTGGTGCCTGC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCATGTCTCGGAGGGCCTaGTTCTCGGCTTTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFMSRRA*FSAFGR
Trigger: GCGGCCAAAAGCCGAGAACCAGGCCCTCCGAGACAT...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGCTATCTCCTGCAGGTaGAACACCGCCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAAISCR*NTATWA
Trigger: GGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCAGAGGTCCCGGAGCTaGCCCTGCCTTGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAQRSRS*PCLEQR
Trigger: CCTCTGTTCAAGGCAGGGCCAGCTCCGGGACCTCTG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCTATTGCACTTCTGCTaGGCACACCTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPLLHFC*AHLGEP
Trigger: GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGGGATGCCTGAGCCTTaGGGTAGCCAGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAGMPEP*GSQGRD
Trigger: GTCCCTTCCCTGGCTACCCCAAGGCTCAGGCATCCC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCTCCCTGCAATGCCGTaGTTGGAAGGCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFLPAMP*LEGRTP
Trigger: TGGGGTCCTGCCTTCCAACCACGGCATTGCAGGGAG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTCGAGGTGTGCGTGGGTaGGGGGAGTCCGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTRGVRG*GESGSP
Trigger: TGGAGACCCGGACTCCCCCCACCCACGCACACCTCG...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGCCACCAGTGAAGCTCTaGGACACAGGAAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRPPVKL*DTGRNA
Trigger: GGCATTCCTTCCTGTGTCCCAGAGCTTCACTGGTGG...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCTCCAGCCAGCACCCTaGGTTTGGACACTTCACCCT +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFLQPAP*VWTLHP
Trigger: AGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGAG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTTTCAGGCGCCTTGCTaGCTCCCACCTTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLFQAPC*LPPSGR
Trigger: CCGGCCGGAAGGTGGGAGTCAGCAAGGCGCCTGAAA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCCCTTCAGTGCCTCCATaGCCCCTGACGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLPSVPP*PLTACC
Trigger: GCAGCAGGCCGTCAGGGGGCATGGAGGCACTGAAGG...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCATGGCCCTCTGCCACTaGTCTTCAGGGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAMALCH*SSGPPG
Trigger: TCCAGGTGGCCCTGAAGAGCAGTGGCAGAGGGCCAT...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCCAAGGTCATCCTTCATaGGCCGCTTGGTCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTQGHPS*AAWSSR
Trigger: GCGACTGGACCAAGCGGCGCATGAAGGATGACCTTG...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCGGGCCCCCTTGTCTCTaGATCCTGGAGGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSGPPCL*ILEASR
Trigger: ACGACTGGCCTCCAGGATGCAGAGACAAGGGGGCCC...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCTCATCCTCCCTGCAATaGCGTGGTTGGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPSSSLQ*RGWKAG
Trigger: TCCTGCCTTCCAACCACGGCATTGCAGGGAGGATGA...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGGACACAGGAAGGAATaGCTCCCCCGACCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCGHRKE*LPRPSD
Trigger: GTCAGAGGGTCGGGGGAGGCATTCCTTCCTGTGTCC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGACAAGGAGCCACTGCTaGTGTCTGCACTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTTRSHC*CLHSAG
Trigger: TCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGT...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCCTGGCTCCTGTGTTTaGGAGGTGGGTCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFPGSCV*EVGLLM
Trigger: CATCAGCAGACCCACCTCCCAAACACAGGAGCCAGG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGGGCACCAATGAGTCCTaGCTCCTGTGTTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTGTNES*LLCLGG
Trigger: ACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCC...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGCGCTGCAGCCCCTGTaGCACCAAGACCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTALQPL*HQDPRH
Trigger: GTGTCTGGGGTCTTGGTGCCACAGGGGCTGCAGCGC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGTGAGGCCAGGATGGTaGCTGCCCGTGCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTVRPGW*LPVPGC
Trigger: GCAACCTGGCACGGGCAGCCACCATCCTGGCCTCAC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCTCCCTTGCCCCAAGCTaGGAGAATTACAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPSLAPS*ENYRQA
Trigger: GGCCTGTCTGTAATTCTCCCAGCTTGGGGCAAGGGA...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTTGGGCCTACCCAGATTaGCAGACAGAAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPWAYPD*QTEGCL
Trigger: AAGGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCA...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGACCCACCCTGGAAAATaGCCTCCCTCCAAACCTACC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTTHPGK*PPSKPT
Trigger: GGTAGGTTTGGAGGGAGGCCATTTTCCAGGGTGGGT...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGAAGGCCAGGCGATCTaGGATGGCACCCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTEGQAI*DGTPLA
Trigger: TGCCAAGGGGGTGCCATCTCAGATCGCCTGGCCTTC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGGCTGGCAGCTGTGTTaGAGGGCATCAAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAGWQLC*RASSFC
Trigger: GCAGAAGCTTGATGCCCTTCAACACAGCTGCCAGCC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCGCCATCAACCTGCTGTaGCTTTGGCCAAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSAINLL*LWPSPS
Trigger: GGAGGGGCTTGGCCAAAGTCACAGCAGGTTGATGGC...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGATCTTCGGTGGGTCATaGAGCATTGGAAGTCGGACC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTIFGGS*SIGSRT
Trigger: GGTCCGACTTCCAATGCTGCATGACCCACCGAAGAT...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCTCCTTCTGTGCTTTGTaGGCTCCGGGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAASFCAL*APGPPQ
Trigger: CTGAGGAGGACCCGGAGCGCACAAAGCACAGAAGGA...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCACAGCGGTACTTCCCTaGCAGGTGGGCCCCCTTACT +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSTAVLP*QVGPLT
Trigger: AGTAAGGGGGCCCACCTGGCAGGGAAGTACCGCTGT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGGGAGAGTGGCTGGCTaGCCCACTGGACGGATGAAG +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLGRVAG*PTGRMK
Trigger: CTTCATCCGTCCAGTGGGGCAGCCAGCCACTCTCCC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGATGGTGGCTGCCCGTaGCAGGTTGCTCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVDGGCP*QVAQVP
Trigger: GGGCACCTGAGCAACCTGGCACGGGCAGCCACCATC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCGTGCCCAGTCAGTACTaGCTCCCTGAGCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSVPSQY*LPEQQG
Trigger: CCCTTGCTGCTCAGGGAGGCAGTACTGACTGGGCAC...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTTTGTCTCCCTACTACTaGAGGCCAAGCCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCLSPYY*RPSPVG
Trigger: CCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAA...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTTCTGGGGGTCAGCTATaGTGGTCCCTCTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCSGGQL*WSLSLR
Trigger: CCTCAGTGAGAGGGACCAGCATAGCTGACCCCCAGA...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGTGTCTTGTCACTGGCTaGACTTCCCGGGTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTCLVTG*TSRVKA
Trigger: TGCTTTGACCCGGGAAGTCCAGCCAGTGACAAGACA...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCAGGGGTCGGTCCATGTaGTTCCAGATCCGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTRGRSM*FQIRCF
Trigger: GAAACACCGGATCTGGAACCACATGGACCGACCCCT...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTCACTGTTCCTCCCTGTaGCACGAGGTGCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPHCSSL*HEVLCS
Trigger: AGAACAAAGCACCTCGTGCCACAGGGAGGAACAGTG...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTAGTGATGGGGGCAGCTaGCACCTTCTTCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTSDGGS*HLLPGV
Trigger: GACGCCCGGAAGAAGGTGCCAGCTGCCCCCATCACT...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGGGCTGGCTGCCCCACTaGACGGATGAAGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVGWLPH*TDEEAG
Trigger: CCCCGCCTCTTCATCCGTCCAGTGGGGCAGCCAGCC...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGAGGGGCAACCCTCCTaGCTATTGCACTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAEGQPS*LLHFCW
Trigger: CCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCTGGAGTTCCAGTGTTaGGTGGAGGTGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCLEFQC*VEVRPG
Trigger: TCCTGGCCTCACCTCCACCCAACACTGGAACTCCAG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCCTGTCAGGTCAGCATaGCAGTGGTCAGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCPVRSA*QWSDRG
Trigger: ACCCCTGTCTGACCACTGCCATGCTGACCTGACAGG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGATCGTCCAGGGTCAGTaGGGCCGAGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVIVQGQ*GRALSP
Trigger: TGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGAT...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCAGGGTTGGAGCCTTCTaGCCCAAGGATGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFRVGAF*PKDEAR
Trigger: TCTGGCTTCATCCTTGGGCCAGAAGGCTCCAACCCT...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAGGGCTGCTGAGGGTTaGAGCCTTCTGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSRAAEG*SLLAQG
Trigger: TCCTTGGGCCAGAAGGCTCCAACCCTCAGCAGCCCT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCCCTCCTCCCGCCATTaGTGGCAAGGACAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAPSSRH*WQGQSA
Trigger: TGCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGGCCGGCTTTGGACTTaGACTGCTTCCGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTGRLWT*TASGSA
Trigger: AGCACTGCCGGAAGCAGTTCAAGTCCAAAGCCGGCC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCCAAACCTACCCCCTCTaGGCCTCATCCTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSQTYPL*ASSSLQ
Trigger: TTGCAGGGAGGATGAGGCTCAGAGGGGGTAGGTTTG...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCAAGGGCCAAGTACCTaGGAGGCTGGGGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVQGPST*EAGAGT
Trigger: GGTGCCTGCCCCAGCCTCTCAGGTACTTGGCCCTTG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCGCAGCCGTCCCATCTaGTTCAGCACCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVRSRPI*FSTLRS
Trigger: GCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTTCCTCCGCTATCTCCTaGAGGTGGAACACCGCCACC +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTSSAIS*RWNTAT
Trigger: GGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGA...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCTGCCCGTGCCAGGTTaGTCAGGTGCCCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVLPVPG*SGALTS
Trigger: GCTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTCCTACTCCACGAGGCTaGTCCAACCTAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTPTPRG*SNLGLQ
Trigger: CTGCAGGCCTAGGTTGGAGCAGCCTCGTGGAGTAGG...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGAGCTGCCATCAACCTaGTGTGACTTTGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAELPST*CDFGQA
Trigger: GGCTTGGCCAAAGTCACAGCAGGTTGATGGCAGCTC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCGGTGTTTCTCCAGCTaGGTCTTAGAGGTGAATGCG +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFRCFSS*VLEVNA
Trigger: CGCATTCACCTCTAAGACCCAGCTGGAGAAACACCG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCTTGTCTCTGCATCCTaGAGGCCAGTCGTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVLVSAS*RPVVPA
Trigger: CGCCGGGACGACTGGCCTCCAGGATGCAGAGACAAG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTAATTACAGACAGGCCTaGGGGGCAGGGCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTNYRQA*GAGPEH
Trigger: GTGCTCAGGCCCTGCCCCCCAGGCCTGTCTGTAATT...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCAGAAGGCTGAACACTaGAGGAGAGCACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCQKAEH*RRAHSR
Trigger: CCTGGAGTGTGCTCTCCTCCAGTGTTCAGCCTTCTG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGTCCCCAAAGTGCTCCTaGAACTTGTCTCCCTACTAC +
Preference number: 4 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTSPKCS*NLSPYY
Trigger: GTAGTAGGGAGACAAGTTCCAGGAGCACTTTGGGGA...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGGGGGTCAGCTATGCTaGTCCCTCTCACTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLGGQLC*SLSLRA
Trigger: AGCCCTCAGTGAGAGGGACCAGCATAGCTGACCCCC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGCGCCCACCACACTCTaGGGGTCAGCTATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVAPTTL*GSAMLV
Trigger: GACCAGCATAGCTGACCCCCAGAGTGTGGTGGGCGC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGCCCGAACTCACCGTTaGAACATCTCGCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPARTHR*NISQIN
Trigger: GTTTATTTGCGAGATGTTTCAACGGTGAGTTCGGGC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGGTCTTAGAGGTGAATaGGGCCTCGCAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLGLRGE*GLAEGA
Trigger: TGCCCCTTCTGCGAGGCCGCATTCACCTCTAAGACC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTCAGCAGCACCATTTTaGAGGGCGGTGTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSSAAPF*RAVCVC
Trigger: GCAGACACACACCGCCCTGCAAAATGGTGCTGCTGA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTCCCTGTGGCACGAGGTaGTTTGTTCTCCGACCTGGT +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTPCGTR*FVLRPG
Trigger: ACCAGGTCGGAGAACAAAGCACCTCGTGCCACAGGG...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTTTCTCTGGCCTGGCCTaGTTGGGTGGAATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTFSGLA*LGGIGQ
Trigger: CTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAA...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTGGATCGGTACGTCTTaGCACAGTGGGTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLWIGTS*HSGCRG
Trigger: TCCCCTGCACCCACTGTGGCAAGACGTACCGATCCA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCAGGGCATCAAGCTTCTaGTGCCCTGTAGGTACAAGA +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTRASSF*CPVGTR
Trigger: TCTTGTACCTACAGGGCAGCAGAAGCTTGATGCCCT...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAACCTAGGCCTGCAGTaGCAGAAGGCTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSNLGLQ*QKAEHW
Trigger: CCAGTGTTCAGCCTTCTGGCACTGCAGGCCTAGGTT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGCTTCCTGCCCCACATaGCTATGGGCCCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVASCPT*LWAPAR
Trigger: TCTTGCTGGGGCCCATAGGCATGTGGGGCAGGAAGC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCATCCCCATCTTCGGTaGGTCATGCAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHESLATGPTQIGRQKAAHPHLR*VMQHWK
Trigger: CTTCCAATGCTGCATGACCCACCGAAGATGGGGATG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCTTTGTTCTCCGACCTaGTCAGCAGCACCATTTTGC +
Preference number: 4 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFLCSPT*SAAPFC
Trigger: GCAAAATGGTGCTGCTGACCAGGTCGGAGAACAAAG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCCCCCATTCTCTGGCCTaGCCTGCTTGGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLPHSLA*PAWVEL
Trigger: CAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGG...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGGTCCTGGGAGGTAGCTaGGGGTGCTGGAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVVLGGS*GCWSSS
Trigger: ACTGGAACTCCAGCACCCCCAGCTACCTCCCAGGAC...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGTGCTTCTTGGAGCGGTaGACTCGGGCCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVCFLER*TRALSS
Trigger: TGAGGACAAGGCCCGAGTTCACCGCTCCAAGAAGCA...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCCTTCTTGGGCACCAATaGGTCCTGGCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSLLGHQ*VLAPVF
Trigger: AAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAG...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCTTCACCCTCGAGTGTaGCTTGAACTCATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCLHPRV*LELILP
Trigger: TGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTTCTGTTTCCTTCTGTaGTTTGTGCGCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSFCFLL*FVRSGS
Trigger: GGACCCGGAGCGCACAAAGCACAGAAGGAAACAGAA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCATGGATGGCCCTCTaGCACTGCTCTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVSWMAL*HCSSGP
Trigger: TGGCCCTGAAGAGCAGTGGCAGAGGGCCATCCATGA...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTGGCTATTGCACTTCTaGTGGGCACACCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLWLLHF*WAHLGE
Trigger: CTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGCATCAAGCTTCTGCTaGCCTGTAGGTACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCASSFC*PVGTRS
Trigger: GCTTCTTGTACCTACAGGGCAGCAGAAGCTTGATGC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGTGGCAGACAGAAGGCTaGCTTTCCCCCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVWQTEG*LSPSGH
Trigger: GTGGCCACTGGGGGAAAGGCAGCCTTCTGTCTGCCA...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCTGCCGACCGAGACTaGCTTGCTGATGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVSADRD*LADANG
Trigger: CCCATTGGCATCAGCAAGCCAGTCTCGGTCGGCAGA...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGGTACTCCCCATTCTCTaGCCTGGCCTGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVVLPIL*PGLLGW
Trigger: CCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTAC...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCTTGGGACAGTTGACGTaGCCTTTCTCCTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTLGQLT*PFSFTS
Trigger: TGAAGTGAAGGAGAAAGGCCACGTCAACTGTCCCAA...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGGCTCCCATGAGAGCTTaGCCACTGGGCCTACCCAGA +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVAPMRA*PLGLPR
Trigger: TCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGAGC...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTCCTCCCGCCATTGGTaGCAAGGACAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLSSRHW*QGQSAP
Trigger: AGGTGCACTTTGTCCTTGCCACCAATGGCGGGAGGA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTGCAAAACCCCTCCCTTaGCCCAAGCTGGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTAKPLP*PKLGEL
Trigger: TAATTCTCCCAGCTTGGGGCAAGGGAGGGGTTTTGC...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGAGTCGTGGCCAGCCTTaGATCGGTACGTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVSRGQP*IGTSCH
Trigger: GTGGCAAGACGTACCGATCCAAGGCTGGCCACGACT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGACTCCCTGGCACATCTaGCAAGGGCTGCTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVTPWHI*QGLLRV
Trigger: AACCCTCAGCAGCCCTTGCCAGATGTGCCAGGGAGT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
3UTR CAA 72 bp GACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTaGGGAGTGTCCCGGAAACTCACCCCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: DSSSHTRDYLWA*GVSRKLTPSKN
Trigger: GTTTTTGCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCCCTCGAGTGTGCCTTaGACTCATCCTTCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVPSSVP*THPSSR
Trigger: ACGACTGGAAGGATGAGTTCAAGGCACACTCGAGGG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGTGCCAATGGGTTTGCTaGCACCCACAGGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVCQWVC*HPQVCQ
Trigger: TTGGCAAACCTGTGGGTGTCAGCAAACCCATTGGCA...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCTTCTGTCTTGTCACTaGCTGGACTTCCCGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVLLSCH*LDFPGQ
Trigger: TTGACCCGGGAAGTCCAGCCAGTGACAAGACAGAAG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGTCGGAACCAGTTCTCTaGGTGGGTCTTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVSEPVL*VGLQDV
Trigger: CACATCCTGAAGACCCACGCAGAGAACTGGTTCCGA...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGAGACAGCTCTGGAGCTaGCATCAACCTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVRQLWS*HQPAVT
Trigger: AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR GCA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCACCAGCAAATAAAGTaGATCCCATTTTCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCHQQIK*IPFSCE
Trigger: CTCACACGAAAATGGGATGCACTTTATTTGCTGGTG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGTGGGTCATGCAGCATTaGAAGTCGGACCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVWVMQH*KSDLLS
Trigger: CGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCA...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGACACGCTGGAGTAGATaGCTTCACAGCAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVTRWSR*LHSSRW
Trigger: CCAACGACTGCTGTGAAGCCATCTACTCCAGCGTGT...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AGGGCCACAAAGGGGCAAAGACAGCTCTGGAGCTGCCATCAACCTGCTGTGACTTGGGTCTTCAGGATGTaGTATTTGACGCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RATKGQRQLWSCHQPAVTWVFRM*YLTPLS
Trigger: TGAGAGTGGCGTCAAATACCACATCCTGAAGACCCA...AGTCACAGCAGGTTGATGGCAGCTCCAGAGCTGTCTTTGCCCCTTTGTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CCA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCATTATCTGTGGGCTTTaGGAGTGTCCCGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: NIKILIVQGQWGRALSPLIICGL*ECPGNS
Trigger: TGAGTTTCCGGGACACTCCCAAAGCCCACAGATAAT...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR TCA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAGTTCCCATATCAAATaGCCACACAACCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSSSHIK*PHNQKQ
Trigger: TTGTTTCTGGTTGTGTGGTCATTTGATATGGGAACT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp CGCAGGGCGGCTTCCCGCAGCGCCGCTGGTGGTACTGGTAGCCCATaGGGCTGGAGAAGGCAGCCCCGCAACCCTCCTGGGGGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: RRAASRSAAGGTGSP*GWRRQPRNPPGGSA
Trigger: TGCGCTGCCCCCAGGAGGGTTGCGGGGCTGCCTTCTCCAGCCTCATGGGCTACCAGTACCACCAGCGGCGCTGCGGGAAGCCGCCCTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp CGCCGCTTGGTCCAGTCGCGGGCCAGCTCGTCCTCCGCTATCTCCTaGAGGTGGAACACCGCCACCTGGGCCGACGTGCGGCGGACACGC +
Preference number: 5 (lower is better)
Translates to: RRLVQSRASSSSAIS*RWNTATWADVRRTR
Trigger: GCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGACGAGCTGGCCCGCGACTGGACCAAGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp CCTCCTCAGGCGGGGACGCAGGGCCTGCAGCCTTCAGTGCCTCCATaGCCCCTGACGGCCTGCTGCCTGGCGACAAGGAGCCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PPQAGTQGLQPSVPP*PLTACCLATRSHCW
Trigger: CCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGGAGGCACTGAAGGCTGCAGGCCCTGCGTCCCCGCCTGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp AAGGCAGCCCCGCAACCCTCCTGGGGGCAGCGCAGCCGTCCCATCTaGTTCAGCACCTTGCGCAGCCTCTCGCGCTCCTCCTGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: KAAPQPSWGQRSRPI*FSTLRSLSRSSCSP
Trigger: GGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCAGGAGGGTTGCGGGGCTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp GCCAGCTCGTCCTCCGCTATCTCCTGCAGGTGGAACACCGCCACCTaGGCCGACGTGCGGCGGACACGCCCGCTTGGGGTCCGCTCCACA +
Preference number: 5 (lower is better)
Translates to: ASSSSAISCRWNTAT*ADVRRTRPLGVRST
Trigger: TGTGGAGCGGACCCCAAGCGGGCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGACGAGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp AACCCTCCTGGGGGCAGCGCAGCCGTCCCATCTGCTTCAGCACCTTaGGCAGCCTCTCGCGCTCCTCCTGCTCGCCCCCTTCGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: NPPGGSAAVPSASAP*AASRAPPARPLRRP
Trigger: AGGCCTCCGAAGGGGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCAGGAGGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp CGTCCCATCTGCTTCAGCACCTTGCGCAGCCTCTCGCGCTCCTCCTaGTCGCCCCCTTCGGAGGCCTCGGCGTCAGAGGGCTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: RPICFSTLRSLSRSS*SPPSEASASEGLAL
Trigger: CAGTGCCAAGCCCTCTGACGCCGAGGCCTCCGAAGGGGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGGTGACCGGGATGGCCTaGGTGACTGGCATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGVTGMA*VTGMGL
Trigger: CAGACCCATGCCAGTCACCAAGGCCATCCCGGTCAC...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp CCTCCATGCCCCCTGACGGCCTGCTGCCTGGCGACAAGGAGCCACTaGTGGTGTCTGCACTCAGCTGGAAGGCCGAGCTCTGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: PPCPLTACCLATRSH*WCLHSAGRPSSGPW
Trigger: CCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp CCATGCCCCCTGACGGCCTGCTGCCTGGCGACAAGGAGCCACTGCTaGTGTCTGCACTCAGCTGGAAGGCCGAGCTCTGGCCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: PCPLTACCLATRSHC*CLHSAGRPSSGPWR
Trigger: CCTCCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGGCGGACACGCCCGCTaGGGGTCCGCTCCACACCCA +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFGGHAR*GSAPHP
Trigger: TGGGTGTGGAGCGGACCCCAAGCGGGCGTGTCCGCC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGTCCTTCATGCGCCGCTaGGTCCAGTCGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRSFMRR*VQSRAS
Trigger: GCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGA...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GGTCCCGGAGCTGGCCCTGCCTTGAACAGAGGGCGGTGTGGCGGCTGCATGGGGACCCTCCTCCCGCCATaGGTGGCAAGGACAAAGTGC +
Preference number: 5 (lower is better)
Translates to: GPGAGPALNRGRCGGCMGTLLPP*VARTKC
Trigger: GCACTTTGTCCTTGCCACCAATGGCGGGAGGAGGGT...CCCCATGCAGCCGCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCCGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp CAGGGCCTGCAGCCTTCAGTGCCTCCATGCCCCCTGACGGCCTGCTaGCTGGCGACAAGGAGCCACTGCTGGTGTCTGCACTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QGLQPSVPPCPLTAC*LATRSHCWCLHSAG
Trigger: TCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGGAGGCACTGAAGGCTGCAGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp GGCCGAGCTCTGGCCCATGGAGGAGGGGCCGTACTCCCCATTCTCTaGCCTGGCCTGCTTGGGTGGAATTGGGCAGGTGTCCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GRALAHGGGAVLPIL*PGLLGWNWAGVQAV
Trigger: GACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAGAGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTGGAGCTGGCCCTGCCTaGAACAGAGGGCGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPGAGPA*NRGRCG
Trigger: GCCACACCGCCCTCTGTTCAAGGCAGGGCCAGCTCC...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp GAAGTCGGACCTCCTTTCGGCTGCCATCCTTCCCGGGACCACTCTTaGTGGACCCCGGGAGCCGACGGCCTCCAACGCAGAAAGGATCCG +
Preference number: 5 (lower is better)
Translates to: EVGPPFGCHPSRDHS*WTPGADGLQRRKDP
Trigger: CGGATCCTTTCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp TGGCCCATGGAGGAGGGGCCGTACTCCCCATTCTCTGGCCTGGCCTaGTTGGGTGGAATTGGGCAGGTGTCCAGGCTGTCCGCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: WPMEEGPYSPFSGLA*LGGIGQVSRLSAAL
Trigger: AAGGGCTGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp GTCGGACCTCCTTTCGGCTGCCATCCTTCCCGGGACCACTCTTGCTaGACCCCGGGAGCCGACGGCCTCCAACGCAGAAAGGATCCGTCA +
Preference number: 5 (lower is better)
Translates to: VGPPFGCHPSRDHSC*TPGADGLQRRKDPS
Trigger: TGACGGATCCTTTCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp GTCTTGTCACTGGCTGGACTTCCCGGGTCAAAGCAGAGAGGGGCCTaGCCGGGCACTGTCTGTCCACCACGGACCACCGGCATCCCCATC +
Preference number: 5 (lower is better)
Translates to: VLSLAGLPGSKQRGA*PGTVCPPRTTGIPI
Trigger: GATGGGGATGCCGGTGGTCCGTGGTGGACAGACAGTGCCCGGCCAGGCCCCTCTCTGCTTTGACCCGGGAAGTCCAGCCAGTGACAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp AGCTCTGGCCCATGGAGGAGGGGCCGTACTCCCCATTCTCTGGCCTaGCCTGCTTGGGTGGAATTGGGCAGGTGTCCAGGCTGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SSGPWRRGRTPHSLA*PAWVELGRCPGCPQ
Trigger: CTGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp CACTGCTGGTGTCTGCACTCAGCTGGAAGGCCGAGCTCTGGCCCATaGAGGAGGGGCCGTACTCCCCATTCTCTGGCCTGGCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: HCWCLHSAGRPSSGP*RRGRTPHSLAWPAW
Trigger: CCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTTTCCGGGTGACCACGTaGCAGGTGGGGCAGACGGCT +
Preference number: 5 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPFRVTT*QVGQTA
Trigger: AGCCGTCTGCCCCACCTGCAACGTGGTCACCCGGAA...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp TTCCGGGCGTCCTCAGGGCCTGGCCCCTCCTGCTTCTTGGAGCGGTaGACTCGGGCCTTGTCCTCAGCTTTGACCAGGCCTTTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: FRASSGPGPSCFLER*TRALSSALTRPLSP
Trigger: TGGGCTCAAAGGCCTGGTCAAAGCTGAGGACAAGGCCCGAGTTCACCGCTCCAAGAAGCAGGAGGGGCCAGGCCCTGAGGACGCCCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGTGACCGGCATGGCCTaGGTGACGGGCATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAAVTGMA*VTGMGL
Trigger: CAGGCCCATGCCCGTCACCAAGGCCATGCCGGTCAC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGCTGCCCGTGCCAGGTaGCTCAGGTGCCCTCACCAG +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAAAARAR*LRCPHQ
Trigger: CTGGTGAGGGCACCTGAGCAACCTGGCACGGGCAGC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 90 bp TCTTCGGTGGGTCATGCAGCATTGGAAGTCGGACCTCCTTTCGGCTaGCATCCTTCCCGGGACCACTCTTGCTGGACCCCGGGAGCCGAC +
Preference number: 5 (lower is better)
Translates to: SSVGHAALEVGPPFG*HPSRDHSCWTPGAD
Trigger: GTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCTCTGGCCTGGCCTGCTaGGGTGGAATTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTSGLAC*GGIGQV
Trigger: CACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGA...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCTCGGCGTCAGAGGGCTaGGCACTGTGCTCGGCCATA +
Preference number: 5 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTSASEG*ALCSAI
Trigger: TATGGCCGAGCACAGTGCCAAGCCCTCTGACGCCGA...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCACTTTTCAGGCGCCTaGCTGACTCCCACCTTCCGG +
Preference number: 5 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPHFSGA*LTPTFR
Trigger: CCGGAAGGTGGGAGTCAGCAAGGCGCCTGAAAAGTG...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCTGGGCCTACCCAGATaGGCAGACAGAAGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTLGLPR*ADRRLP
Trigger: AGGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp TCCCTGCCAGGTGGGCCCCCTTACTGCAGCTGGCGAGATGAGCCTTaGGTCCGGACACGCTGGAGTAGATGGCTTCACAGCAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: SLPGGPPYCSWRDEP*VRTRWSRWLHSSRW
Trigger: CCAACGACTGCTGTGAAGCCATCTACTCCAGCGTGTCCGGACTCAAGGCTCATCTCGCCAGCTGCAGTAAGGGGGCCCACCTGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp ACCACGGACCACCGGCATCCCCATCTTCGGTGGGTCATGCAGCATTaGAAGTCGGACCTCCTTTCGGCTGCCATCCTTCCCGGGACCACT +
Preference number: 5 (lower is better)
Translates to: TTDHRHPHLRWVMQH*KSDLLSAAILPGTT
Trigger: AGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGGTCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTTCCCGGGACCACTCTaGCTGGACCCCGGGAGCCGA +
Preference number: 5 (lower is better)
Translates to: NIKILIVQGQWGRALSPLFPGPL*LDPGSR
Trigger: TCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCGCTTTGACCAGGCCTTaGAGCCCAAAGGTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPALTRP*SPKVPE
Trigger: CTCAGGGACCTTTGGGCTCAAAGGCCTGGTCAAAGC...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGGGGCCGGTGCCTCCTaGCTGACAGTGATGGGGGCA +
Preference number: 5 (lower is better)
Translates to: NIKILIVQGQWGRALSPLGAGAS*LTVMGA
Trigger: TGCCCCCATCACTGTCAGCAAGGAGGCACCGGCCCC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTTCAGCCTCAGGGGACTaGTCTGTGGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCSASGD*SVGSSG
Trigger: CCCTGAGGAGCCCACAGACAAGTCCCCTGAGGCTGA...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCTCTGCTGGGCACACCTaGGGGAGCCCCAACCCAGGT +
Preference number: 5 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSSAGHT*GSPNPG
Trigger: ACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGA...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGGTGGGTCATGCAGCATaGGAAGTCGGACCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTVGHAA*EVGPPF
Trigger: GAAAGGAGGTCCGACTTCCAATGCTGCATGACCCAC...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCGTGACAGGTACGGGTTaGGTGACCGGCACAGACTTG +
Preference number: 5 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTVTGTG*VTGTDL
Trigger: CAAGTCTGTGCCGGTCACCAAACCCGTACCTGTCAC...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGTGGCACGAGGTGCTTaGTTCTCCGACCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAAVARGA*FSDLVS
Trigger: GCTGACCAGGTCGGAGAACAAAGCACCTCGTGCCAC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGTTTCCTTCTGTGCTTaGTGCGCTCCGGGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFVSFCA*CAPGPP
Trigger: AGGAGGACCCGGAGCGCACAAAGCACAGAAGGAAAC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTAGGCCGGCTTTGGACTaGAACTGCTTCCGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCRPALD*NCFRQC
Trigger: GCACTGCCGGAAGCAGTTCAAGTCCAAAGCCGGCCT...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGCTTCACAGCAGTCGTaGGGACAGTTGACGTGGCCT +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFASQQS*GQLTWP
Trigger: AGGCCACGTCAACTGTCCCAACGACTGCTGTGAAGC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCCAACCTGCTGTGACTTaGGCCAAGCCCCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSQPAVT*AKPLPW
Trigger: CCAGGGGAGGGGCTTGGCCAAAGTCACAGCAGGTTG...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp ATGGGCCCCAGCAAGACCCCAGGGCCCGAACTAGTCCGTCCCTACTCCACGAGGGATTATCTGTGGGCTTaGGGAGTGTCCCGGAAACTC +
Preference number: 5 (lower is better)
Translates to: MGPSKTPGPELVRPYSTRDYLWA*GVSRKL
Trigger: GAGTTTCCGGGACACTCCCAAAGCCCACAGATAATC...CCTCGTGGAGTAGGGACGGACTAGTTCGGGCCCTGGGGTCTTGCTGGGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp GGCGATCTGAGATGGCACCCCCTTGGCACCGCTGGTAATGGTACTTaGGCCCGTAGATGCTGGGGAACTCCAGCCAGCACCCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GDLRWHPLGTAGNGT*ARRCWGTPASTLSL
Trigger: CAAACTCAGGGTGCTGGCTGGAGTTCCCCAGCATCTACGGGCTCAAGTACCATTACCAGCGGTGCCAAGGGGGTGCCATCTCAGATCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GAGGGGCAACCCTCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCTTCTTCCCTTCTGTCTaGTCACTGGCTGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: EGQPSWLLHFCWAHLGEPFFPSV*SLAGLP
Trigger: GGGAAGTCCAGCCAGTGACAAGACAGAAGGGAAGAA...GGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGAGGGTTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCCCTGGTTCTCGGCTTTaGGCCGCCCCTTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAAPGSRL*AAPFSS
Trigger: GGAAGAAAAAGGGGCGGCCAAAAGCCGAGAACCAGG...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AAAGGAGGGGGTCAGACCCAACAGCCACTTCTGGCAGTAGCCCCCACGCCTACCACCCTCGAGTGTGCCTaGAACTCATCCTTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: KGGGQTQQPLLAVAPTPTTLECA*NSSFQS
Trigger: CGACTGGAAGGATGAGTTCAAGGCACACTCGAGGGT...GGTAGGCGTGGGGGCTACTGCCAGAAGTGGCTGTTGGGTCTGACCCCCTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGCCAGCACCCTGAGTTaGGACACTTCACCCTCGAGT +
Preference number: 5 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCASTLS*DTSPSS
Trigger: ACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CCAGTCAGTACTGCCTCCCTGAGCAGCAAGGGACCCCAACCCCAGAGACCCACGCCAATAGTGACAGGTTaGCTCACTCCGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PVSTASLSSKGPQPQRPTPIVTG*LTPMGL
Trigger: CAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGG...CGTGGGTCTCTGGGGTTGGGGTCCCTTGCTGCTCAGGGAGGCAGTACTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTCTGACTGTGACAGGTTaGGTGACTGGCACGGGCCTA +
Preference number: 5 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCLTVTG*VTGTGL
Trigger: TAGGCCCGTGCCAGTCACCAAACCTGTCACAGTCAG...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCTGGCTATTGCACTTCTGCTGGGCACACCTTGGGGAGCCCCAACCCAGGTGTGCCTTGTCCTCAGCTTaGACCAGGCCTTTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SWLLHFCWAHLGEPQPRCALSSA*TRPLSP
Trigger: TGGGCTCAAAGGCCTGGTCAAAGCTGAGGACAAGGC...ACACCTGGGTTGGGGCTCCCCAAGGTGTGCCCAGCAGAAGTGCAATAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCCAGTCGTTGGGACAGTaGACGTGGCCTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFQSLGQ*TWPFSF
Trigger: GAAGGAGAAAGGCCACGTCAACTGTCCCAACGACTG...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCTCCTGGCTCCTGTGTTaGGGAGGTGGGTCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAASWLLC*GGGSAD
Trigger: ATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGA...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCTCACTCCGATGGGCTaGCTGACCCCAACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVLTPMG*LTPTGR
Trigger: CCGGCCTGTTGGGGTCAGCAAGCCCATCGGAGTGAG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CATTGGTGGCAAGGACAAAGTGCACCTAGGCCCCCGCCCAGTGCCTGCTCCCCTCTGACACCCACAGGTTaGCCAATAGTGACAGGTTTG +
Preference number: 5 (lower is better)
Translates to: HWWQGQSAPRPPPSACSPLTPTG*PIVTGL
Trigger: CAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAG...AGGGGAGCAGGCACTGGGCGGGGGCCTAGGTGCACTTTGTCCTTGCCACCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCGTTACCGTAATGGGTTaGGTGACAGGTACGGGTTTG +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFVTVMG*VTGTGL
Trigger: CAAACCCGTACCTGTCACCAAACCCATTACGGTAAC...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCTGACTGTCACCGGCTaGCTGACCACAATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVLTVTG*LTTMGL
Trigger: CAGGCCCATTGTGGTCAGCAAGCCGGTGACAGTCAG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCGTCAGCAGCACCATTTaGCAGGGCGGTGTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: NIKILIVQGQWGRALSPLVSSTI*QGGVCL
Trigger: CAGACACACACCGCCCTGCAAAATGGTGCTGCTGAC...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GGTATCCAGGACTCCTCTTCCCACACCAGGGATTATCTGTGGGCTTTGGGAGTGCCTGCTTGGGTGGAATaGGGCAGGTGTCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GIQDSSSHTRDYLWALGVPAWVE*GRCPGC
Trigger: ACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGG...CACTCCCAAAGCCCACAGATAATCCCTGGTGTGGGAAGAGGAGTCCTGGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CCACTTCTGGCAGTAGCCCCCACGCCTACCTTAAAGACAAAGGGGGTTAAAGTGCTGACTGTCACTGGCTaGGTGACCGGCACGGGTTTC +
Preference number: 5 (lower is better)
Translates to: PLLAVAPTPTLKTKGVKVLTVTG*VTGTGF
Trigger: GAAACCCGTGCCGGTCACCAAGCCAGTGACAGTCAG...CACTTTAACCCCCTTTGTCTTTAAGGTAGGCGTGGGGGCTACTGCCAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp GCTCCTGGAACTTGTCTCCCTACTACTGCAGGCCAAGCCCAGTGGGGCCCCTTCTTCAGGATGTGGTATTaGACGCCACTCTCAGAACTG +
Preference number: 5 (lower is better)
Translates to: APGTCLPTTAGQAQWGPFFRMWY*TPLSEL
Trigger: CAGTTCTGAGAGTGGCGTCAAATACCACATCCTGAA...GAAGGGGCCCCACTGGGCTTGGCCTGCAGTAGTAGGGAGACAAGTTCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp CACACCAGGGATTATCTGTGGGCTTTGGGAGTGTCCCGGAAACTCACCCCCAGCAAGTGCTCCTGGAACTaGTCTCCCTACTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: HTRDYLWALGVSRKLTPSKCSWN*SPYYCR
Trigger: CCTGCAGTAGTAGGGAGACAAGTTCCAGGAGCACTT...GCTGGGGGTGAGTTTCCGGGACACTCCCAAAGCCCACAGATAATCCCTGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCCTGATGCCAATGGGTTaGCTGACACCCACAGGTTTG +
Preference number: 5 (lower is better)
Translates to: NIKILIVQGQWGRALSPLLMPMG*LTPTGL
Trigger: CAAACCTGTGGGTGTCAGCAAACCCATTGGCATCAG...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp TCCCATGAGAGCTTGGCCACTGGGCCTACCCAGATTGGCAGACAGAAGGCTGCCGGCCCGAACTCACCGTaGAAACATCTCGCAAATAAA +
Preference number: 5 (lower is better)
Translates to: SHESLATGPTQIGRQKAAGPNSP*KHLANK
Trigger: TTTATTTGCGAGATGTTTCAACGGTGAGTTCGGGCC...GGCAGCCTTCTGTCTGCCAATCTGGGTAGGCCCAGTGGCCAAGCTCTCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp CCAGCCAGCACCCTGAGTTTGGACACTTCACCCTCGAGTGTGCCTTaGACTCATCCTTCCAGTCGTTCATCAGGGAGAGAGGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: PASTLSLDTSPSSVP*THPSSRSSGREECL
Trigger: GAGACATTCCTCTCTCCCTGATGAACGACTGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 90 bp ATGGTACTTGAGCCCGTAGATGCTGGGGAACTCCAGCCAGCACCCTaGGTTTGGACACTTCACCCTCGAGTGTGCCTTGAACTCATCCTT +
Preference number: 5 (lower is better)
Translates to: MVLEPVDAGELQPAP*VWTLHPRVCLELIL
Trigger: AAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGAGTTCCCCAGCATCTACGGGCTCAAGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 90 bp TCTTCTTTTCCTTCTTGGGCACCAATGAGTCCTGGCTCCTGTGTTTaGGAGGTGGGTCTGCTGATGTTCGGAACCAGTTCTCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: SSFPSWAPMSPGSCV*EVGLLMFGTSSLRG
Trigger: CCCACGCAGAGAACTGGTTCCGAACATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS-3UTR CAA 90 bp AACATCAAAATTCTCATCGTCCAGGGTCAGTGGGGCCGAGCCCTCAGCCCACTCTTCTTCTTTTCCTTCTaGGGCACCAATGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NIKILIVQGQWGRALSPLFFFSF*GTNESW
Trigger: CCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGAA...GAGTGGGCTGAGGGCTCGGCCCCACTGACCCTGGACGATGAGAATTTTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp CATCCTGGAGGCCAGTCGTCCCGGCGCGGGGGCAGCTaGGCCACAGGCTCCTCTGGGGTCCGCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: HPGGQSSRRGGS*ATGSSGVRSLG
Trigger: GCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCCAAGCTGCCCCCGCGCCGGGACGACTGGCCTCCAGGATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp GGTGGAACACCGCCACCTGGGCCGACGTGCGGCGGACACGCCCGCTaGGGGTCCGCTCCACACCCAGCGGGTCCTCAGCCTCAGGGGACT +
Preference number: 6 (lower is better)
Translates to: GGTPPPGPTCGGHAR*GSAPHPAGPQPQGT
Trigger: AGTCCCCTGAGGCTGAGGACCCGCTGGGTGTGGAGCGGACCCCAAGCGGGCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp ATCCTGGAGGCCAGTCGTCCCGGCGCGGGGGCAGCTTaGCCACAGGCTCCTCTGGGGTCCGCTCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: ILEASRPGAGAA*PQAPLGSAPWA
Trigger: AGCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCCAAGCTGCCCCCGCGCCGGGACGACTGGCCTCCAGGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp CAACCCTCCTGGGGGCAGCGCAGCCGTCCCATCTGCTTCAGCACCTaGCGCAGCCTCTCGCGCTCCTCCTGCTCGCCCCCTTCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QPSWGQRSRPICFST*RSLSRSSCSPPSEA
Trigger: GGCCTCCGAAGGGGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCAGGAGGGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp GTCCAGTCGCGGGCCAGCTCGTCCTCCGCTATCTCCTaGAGGTGGAACACCGCCACCTGGGCCGACGTGCGG +
Preference number: 6 (lower is better)
Translates to: VQSRASSSSAIS*RWNTATWADVR
Trigger: CCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGACGAGCTGGCCCGCGACTGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TCCTCCGCTATCTCCTGCAGGTGGAACACCGCCACCTaGGCCGACGTGCGGCGGACACGCCCGCTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSAISCRWNTAT*ADVRRTRPLGV
Trigger: GACCCCAAGCGGGCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TCGCGGGCCAGCTCGTCCTCCGCTATCTCCTGCAGGTaGAACACCGCCACCTGGGCCGACGTGCGGCGGACA +
Preference number: 6 (lower is better)
Translates to: SRASSSSAISCR*NTATWADVRRT
Trigger: TGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGACGAGCTGGCCCGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp TGGGGGCAGCGCAGCCGTCCCATCTGCTTCAGCACCTaGCGCAGCCTCTCGCGCTCCTCCTGCTCGCCCCCT +
Preference number: 6 (lower is better)
Translates to: WGQRSRPICFST*RSLSRSSCSPP
Trigger: AGGGGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp TCAGGGCCACCTGGAGCTGGGTGGGCCACAGGGGCCGGTGCCTCCTaGCTGACAGTGATGGGGGCAGCTGGCACCTTCTTCCGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: SGPPGAGWATGAGAS*LTVMGAAGTFFRAS
Trigger: GGACGCCCGGAAGAAGGTGCCAGCTGCCCCCATCACTGTCAGCAAGGAGGCACCGGCCCCTGTGGCCCACCCAGCTCCAGGTGGCCCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp CGCAGGGCCTGCAGCCTTCAGTGCCTCCATGCCCCCTaGCGGCCTGCTGCCTGGCGACAAGGAGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: RRACSLQCLHAP*RPAAWRQGATA
Trigger: AGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGGAGGCACTGAAGGCTGCAGGCCCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp GCTTCCCGCAGCGCCGCTGGTGGTACTGGTAGCCCATaGGGCTGGAGAAGGCAGCCCCGCAACCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ASRSAAGGTGSP*GWRRQPRNPPG
Trigger: CCCAGGAGGGTTGCGGGGCTGCCTTCTCCAGCCTCATGGGCTACCAGTACCACCAGCGGCGCTGCGGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CTGGCTGGACTTCCCGGGTCAAAGCAGAGAGGGGCCTaGCCGGGCACTGTCTGTCCACCACGGACCACCGGC +
Preference number: 6 (lower is better)
Translates to: LAGLPGSKQRGA*PGTVCPPRTTG
Trigger: GCCGGTGGTCCGTGGTGGACAGACAGTGCCCGGCCAGGCCCCTCTCTGCTTTGACCCGGGAAGTCCAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp CCTCCTTTCGGCTGCCATCCTTCCCGGGACCACTCTTaGTGGACCCCGGGAGCCGACGGCCTCCAACGCAGA +
Preference number: 6 (lower is better)
Translates to: PPFGCHPSRDHS*WTPGADGLQRR
Trigger: TCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp GGCGACAAGGAGCCACTGCTGGTGTCTGCACTCAGCTaGAAGGCCGAGCTCTGGCCCATGGAGGAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: GDKEPLLVSALS*KAELWPMEEGP
Trigger: CGGCCCCTCCTCCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp ACCTCCTTTCGGCTGCCATCCTTCCCGGGACCACTCTaGCTGGACCCCGGGAGCCGACGGCCTCCAACGCAG +
Preference number: 6 (lower is better)
Translates to: TSFRLPSFPGPL*LDPGSRRPPTQ
Trigger: CTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp CCCCTGACGGCCTGCTGCCTGGCGACAAGGAGCCACTaGTGGTGTCTGCACTCAGCTGGAAGGCCGAGCTCT +
Preference number: 6 (lower is better)
Translates to: PLTACCLATRSH*WCLHSAGRPSS
Trigger: AGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp CAGCCTTCAGTGCCTCCATGCCCCCTGACGGCCTGCTaGCTGGCGACAAGGAGCCACTGCTGGTGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: QPSVPPCPLTAC*LATRSHCWCLH
Trigger: GTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGGGGGCATGGAGGCACTGAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CCTTTCGGCTGCCATCCTTCCCGGGACCACTCTTGCTaGACCCCGGGAGCCGACGGCCTCCAACGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: PFGCHPSRDHSC*TPGADGLQRRK
Trigger: CTTTCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp GCGGTCTCGGGCACAAGGTCATCCTTCATGCGCCGCTaGGTCCAGTCGCGGGCCAGCTCGTCCTCCGCTATC +
Preference number: 6 (lower is better)
Translates to: AVSGTRSSFMRR*VQSRASSSSAI
Trigger: GATAGCGGAGGACGAGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGATGACCTTGTGCCCGAGACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp GGAAGTCGGACCTCCTTTCGGCTGCCATCCTTCCCGGGACCACTCTaGCTGGACCCCGGGAGCCGACGGCCTCCAACGCAGAAAGGATCC +
Preference number: 6 (lower is better)
Translates to: GSRTSFRLPSFPGPL*LDPGSRRPPTQKGS
Trigger: GGATCCTTTCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp TTGAGCCGTGCGGTCTCGGGCACAAGGTCATCCTTCATGCGCCGCTaGGTCCAGTCGCGGGCCAGCTCGTCCTCCGCTATCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LSRAVSGTRSSFMRR*VQSRASSSSAISCR
Trigger: CCTGCAGGAGATAGCGGAGGACGAGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGATGACCTTGTGCCCGAGACCGCACGGCTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp GCCGTACTCCCCATTCTCTGGCCTGGCCTGCTTGGGTaGAATTGGGCAGGTGTCCAGGCTGTCCGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: AVLPILWPGLLG*NWAGVQAVRSP
Trigger: AGGGCTGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CTGGCCCATGGAGGAGGGGCCGTACTCCCCATTCTCTaGCCTGGCCTGCTTGGGTGGAATTGGGCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: LAHGGGAVLPIL*PGLLGWNWAGV
Trigger: GACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TGTCTGCACTCAGCTGGAAGGCCGAGCTCTGGCCCATaGAGGAGGGGCCGTACTCCCCATTCTCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: CLHSAGRPSSGP*RRGRTPHSLAW
Trigger: CCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CGGTCTCGGGCACAAGGTCATCCTTCATGCGCCGCTTaGTCCAGTCGCGGGCCAGCTCGTCCTCCGCTATCT +
Preference number: 6 (lower is better)
Translates to: RSRAQGHPSCAA*SSRGPARPPLS
Trigger: AGATAGCGGAGGACGAGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGATGACCTTGTGCCCGAGACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp GCAGCTTGGCCACAGGCTCCTCTGGGGTCCGCTCCTTaGGCTTTCGGCCCCGCTTCTTTCCACCTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: AAWPQAPLGSAP*AFGPASFHLPD
Trigger: ATCTGGCAGGTGGAAAGAAGCGGGGCCGAAAGCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCCAAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp GAGGGGCCGTACTCCCCATTCTCTGGCCTGGCCTGCTaGGGTGGAATTGGGCAGGTGTCCAGGCTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: EGPYSPFSGLAC*GGIGQVSRLSA
Trigger: TGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp TCCTCAGGGCCTGGCCCCTCCTGCTTCTTGGAGCGGTaGACTCGGGCCTTGTCCTCAGCTTTGACCAGGCCT +
Preference number: 6 (lower is better)
Translates to: SSGPGPSCFLER*TRALSSALTRP
Trigger: AGGCCTGGTCAAAGCTGAGGACAAGGCCCGAGTTCACCGCTCCAAGAAGCAGGAGGGGCCAGGCCCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TGTGCTCCGAGCGCACGTGGTAGTCGTGGCCAGCCTTaGATCGGTACGTCTTGCCACAGTGGGTGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: CAPSARGSRGQP*IGTSCHSGCRG
Trigger: TCCCCTGCACCCACTGTGGCAAGACGTACCGATCCAAGGCTGGCCACGACTACCACGTGCGCTCGGAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp CACCACGGACCACCGGCATCCCCATCTTCGGTGGGTCATGCAGCATaGGAAGTCGGACCTCCTTTCGGCTGCCATCCTTCCCGGGACCAC +
Preference number: 6 (lower is better)
Translates to: HHGPPASPSSVGHAA*EVGPPFGCHPSRDH
Trigger: GTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGGTCCGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp GGTGGGCCCCCTTACTGCAGCTGGCGAGATGAGCCTTaGGTCCGGACACGCTGGAGTAGATGGCTTCACAGC +
Preference number: 6 (lower is better)
Translates to: GGPPYCSWRDEP*VRTRWSRWLHS
Trigger: GCTGTGAAGCCATCTACTCCAGCGTGTCCGGACTCAAGGCTCATCTCGCCAGCTGCAGTAAGGGGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp GGTCATGCAGCATTGGAAGTCGGACCTCCTTTCGGCTaGCATCCTTCCCGGGACCACTCTTGCTGGACCCCG +
Preference number: 6 (lower is better)
Translates to: GHAALEVGPPFG*HPSRDHSCWTP
Trigger: CGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS GCA 72 bp CCACGGACCACCGGCATCCCCATCTTCGGTGGGTCATaGAGCATTGGAAGTCGGACCTCCTTTCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PRTTGIPIFGGS*SIGSRTSFRLP
Trigger: TGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGGTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp AGATGGCACCCCCTTGGCACCGCTGGTAATGGTACTTaGGCCCGTAGATGCTGGGGAACTCCAGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: RWHPLGTAGNGT*ARRCWGTPAST
Trigger: GGTGCTGGCTGGAGTTCCCCAGCATCTACGGGCTCAAGTACCATTACCAGCGGTGCCAAGGGGGTGCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CACCGGCATCCCCATCTTCGGTGGGTCATGCAGCATTaGAAGTCGGACCTCCTTTCGGCTGCCATCCTTCCC +
Preference number: 6 (lower is better)
Translates to: HRHPHLRWVMQH*KSDLLSAAILP
Trigger: GGGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp CCACCGGCATCCCCATCTTCGGTGGGTCATGCAGCATaGGAAGTCGGACCTCCTTTCGGCTGCCATCCTTCC +
Preference number: 6 (lower is better)
Translates to: PPASPSSVGHAA*EVGPPFGCHPS
Trigger: GGAAGGATGGCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp ACTCCCCATTCTCTGGCCTGGCCTGCTTGGGTGGAATaGGGCAGGTGTCCAGGCTGTCCGCAGCCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: TPHSLAWPAWVE*GRCPGCPQPFS
Trigger: AGAAAAGGGCTGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp CCCACAGGTTTGCCAATAGTGACAGGTTTGCTCACTCCGATGGGCTaGCTGACCCCAACAGGCCGGCTGATGGTGACCGGCCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: PTGLPIVTGLLTPMG*LTPTGRLMVTGLLM
Trigger: CATCAGCAGGCCGGTCACCATCAGCCGGCCTGTTGGGGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CGGTCCATGTGGTTCCAGATCCGGTGTTTCTCCAGCTaGGTCTTAGAGGTGAATGCGGCCTCGCAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RSMWFQIRCFSS*VLEVNAASQKG
Trigger: CCCCTTCTGCGAGGCCGCATTCACCTCTAAGACCCAGCTGGAGAAACACCGGATCTGGAACCACATGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TCCTCCCTGTGGCACGAGGTGCTTTGTTCTCCGACCTaGTCAGCAGCACCATTTTGCAGGGCGGTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: SSLWHEVLCSPT*SAAPFCRAVCV
Trigger: GACACACACCGCCCTGCAAAATGGTGCTGCTGACCAGGTCGGAGAACAAAGCACCTCGTGCCACAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp TTGCCAATAGTGACAGGTTTGCTCACTCCGATGGGCTaGCTGACCCCAACAGGCCGGCTGATGGTGACCGGC +
Preference number: 6 (lower is better)
Translates to: LPIVTGLLTPMG*LTPTGRLMVTG
Trigger: GCCGGTCACCATCAGCCGGCCTGTTGGGGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp GTGGCACGAGGTGCTTTGTTCTCCGACCTGGTCAGCAGCACCATTTaGCAGGGCGGTGTGTGTCTGCTGATAGCAATGGGCCTGCTGACT +
Preference number: 6 (lower is better)
Translates to: VARGALFSDLVSSTI*QGGVCLLIAMGLLT
Trigger: AGTCAGCAGGCCCATTGCTATCAGCAGACACACACCGCCCTGCAAAATGGTGCTGCTGACCAGGTCGGAGAACAAAGCACCTCGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp GAGCCCGTAGATGCTGGGGAACTCCAGCCAGCACCCTaGGTTTGGACACTTCACCCTCGAGTGTGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: EPVDAGELQPAP*VWTLHPRVCLE
Trigger: TTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGAGTTCCCCAGCATCTACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp TCATCAGGGAGAGAGGAATGTCTCGGAGGGCCTGGTTCTCGGCTTTaGGCCGCCCCTTTTTCTTCCCTTCTGTCTTGTCACTGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: SSGREECLGGPGSRL*AAPFSSLLSCHWLD
Trigger: GTCCAGCCAGTGACAAGACAGAAGGGAAGAAAAAGGGGCGGCCAAAAGCCGAGAACCAGGCCCTCCGAGACATTCCTCTCTCCCTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp CCAATGGGTTTGCTGACACCCACAGGTTTGCCAATAGTGACAGGTTaGCTCACTCCGATGGGCTTGCTGACCCCAACAGGCCGGCTGATG +
Preference number: 6 (lower is better)
Translates to: PMGLLTPTGLPIVTG*LTPMGLLTPTGRLM
Trigger: CATCAGCCGGCCTGTTGGGGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAAACCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp GGTGCTTTGTTCTCCGACCTGGTCAGCAGCACCATTTaGCAGGGCGGTGTGTGTCTGCTGATAGCAATGGGC +
Preference number: 6 (lower is better)
Translates to: GALFSDLVSSTI*QGGVCLLIAMG
Trigger: GCCCATTGCTATCAGCAGACACACACCGCCCTGCAAAATGGTGCTGCTGACCAGGTCGGAGAACAAAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp GGCATGGGTCTGCCGACCGAGACTGGCTTGCTGATGCCAATGGGTTaGCTGACACCCACAGGTTTGCCAATAGTGACAGGTTTGCTCACT +
Preference number: 6 (lower is better)
Translates to: GMGLPTETGLLMPMG*LTPTGLPIVTGLLT
Trigger: AGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAAACCCATTGGCATCAGCAAGCCAGTCTCGGTCGGCAGACCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp CCTTCTTGGGCACCAATGAGTCCTGGCTCCTGTGTTTaGGAGGTGGGTCTGCTGATGTTCGGAACCAGTTCT +
Preference number: 6 (lower is better)
Translates to: PSWAPMSPGSCV*EVGLLMFGTSS
Trigger: AGAACTGGTTCCGAACATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp AGAGAGGAATGTCTCGGAGGGCCTGGTTCTCGGCTTTaGGCCGCCCCTTTTTCTTCCCTTCTGTCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: REECLGGPGSRL*AAPFSSLLSCH
Trigger: GTGACAAGACAGAAGGGAAGAAAAAGGGGCGGCCAAAAGCCGAGAACCAGGCCCTCCGAGACATTCCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp TTGCTGACACCCACAGGTTTGCCAATAGTGACAGGTTaGCTCACTCCGATGGGCTTGCTGACCCCAACAGGC +
Preference number: 6 (lower is better)
Translates to: LLTPTGLPIVTG*LTPMGLLTPTG
Trigger: GCCTGTTGGGGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp TCCTTCTTGGGCACCAATGAGTCCTGGCTCCTGTGTTaGGGAGGTGGGTCTGCTGATGTTCGGAACCAGTTC +
Preference number: 6 (lower is better)
Translates to: SFLGTNESWLLC*GGGSADVRNQF
Trigger: GAACTGGTTCCGAACATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp GAGACTGGCTTGCTGATGCCAATGGGTTTGCTGACACCCACAGGTTaGCCAATAGTGACAGGTTTGCTCACTCCGATGGGCTTGCTGACC +
Preference number: 6 (lower is better)
Translates to: ETGLLMPMGLLTPTG*PIVTGLLTPMGLLT
Trigger: GGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAAACCCATTGGCATCAGCAAGCCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp TCCAGCCAGCACCCTGAGTTTGGACACTTCACCCTCGAGTGTGCCTaGAACTCATCCTTCCAGTCGTTCATCAGGGAGAGAGGAATGTCT +
Preference number: 6 (lower is better)
Translates to: SSQHPEFGHFTLECA*NSSFQSFIRERGMS
Trigger: AGACATTCCTCTCTCCCTGATGAACGACTGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 90 bp TTCTTCTTTTCCTTCTTGGGCACCAATGAGTCCTGGCTCCTGTGTTaGGGAGGTGGGTCTGCTGATGTTCGGAACCAGTTCTCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: FFFSFLGTNESWLLC*GGGSADVRNQFSAW
Trigger: CCACGCAGAGAACTGGTTCCGAACATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp ACCCTGAGTTTGGACACTTCACCCTCGAGTGTGCCTTaGACTCATCCTTCCAGTCGTTCATCAGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: TLSLDTSPSSVP*THPSSRSSGRE
Trigger: CTCTCTCCCTGATGAACGACTGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CAA 72 bp CACCCTGAGTTTGGACACTTCACCCTCGAGTGTGCCTaGAACTCATCCTTCCAGTCGTTCATCAGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: HPEFGHFTLECA*NSSFQSFIRER
Trigger: TCTCTCCCTGATGAACGACTGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS TCA 72 bp TGGAGTAGATGGCTTCACAGCAGTCGTTGGGACAGTTaGCGTGGCCTTTCTCCTTCACTTCATTCTTCCATG +
Preference number: 6 (lower is better)
Translates to: WSRWLHSSRWDS*RGLSPSLHSSM
Trigger: CATGGAAGAATGAAGTGAAGGAGAAAGGCCACGTCAACTGTCCCAACGACTGCTGTGAAGCCATCTACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369888.6
CDS CCA 72 bp TTTTTCTTCTTTTCCTTCTTGGGCACCAATGAGTCCTaGCTCCTGTGTTTGGGAGGTGGGTCTGCTGATGTT +
Preference number: 6 (lower is better)
Translates to: FFFFSFLGTNES*LLCLGGGSADV
Trigger: AACATCAGCAGACCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369888.6