RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF512 (Homo sapiens)

Ensembl gene IDs: ENSG00000243943

Ensembl transcript IDs: ENST00000355467.6, ENST00000379717.5, ENST00000413371.6, ENST00000416005.6, ENST00000461705.1, ENST00000488055.1, ENST00000494548.1, ENST00000556601.5

Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGGCGTAGACTAACAAGTAAGGTAAAGTCCAGGGAGAAGGAATaGGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGG +
Preference number: 1 (lower is better)
Translates to: VGRRLTSKVKSREKE*APWFSLSGTTRSTR
Trigger: CCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACTTTACCTTACTTGTTAGTCTACGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR GCA 90 bp CCATCTCTAGCCATCTTCTTACCCCCATACAGTGTCAAGGAGTCATaGAGCAGGTCGGCGTCAAAGAACACTGGAAACATCTTTCTGAGA +
Preference number: 1 (lower is better)
Translates to: PSLAIFLPPYSVKES*SRSASKNTGNIFLR
Trigger: TCTCAGAAAGATGTTTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGGGTAAGAAGATGGCTAGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CCA 90 bp AGACTAACAAGTAAGGTAAAGTCCAGGGAGAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCA +
Preference number: 1 (lower is better)
Translates to: RLTSKVKSREKECAP*FSLSGTTRSTRRLS
Trigger: TGACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACTTTACCTTACTTGTTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR TCA 90 bp AGAAGCAAAAATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGC +
Preference number: 1 (lower is better)
Translates to: RSKNKLQRASDHSYG*GLGLQESWGSIYCC
Trigger: GCAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTATTTTTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR GCA 90 bp TTTACGCAAAATGGGGAAGAGAATCCAGAAACACGACAACAAAGCTaGTCTAACCAATGTTCCAGAGAAAGCCACCCTCAAAGAGAAATA +
Preference number: 1 (lower is better)
Translates to: FTQNGEENPETRQQS*SNQCSRESHPQREI
Trigger: TATTTCTCTTTGAGGGTGGCTTTCTCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGTTTCTGGATTCTCTTCCCCATTTTGCGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CCA 90 bp GAGTGCATATACCATGTCCTTAACTTGTTTCAAAACTACCTATTCTaGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTG +
Preference number: 1 (lower is better)
Translates to: ECIYHVLNLFQNYLF*QYPIQVSVLPCLKV
Trigger: CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTAGTTTTGAAACAAGTTAAGGACATGGTATATGCACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 2 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 2 (lower is better)
Translates to: NAHLGFPLVALPGALGDCQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 2 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 2 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGGTTGGCTAAGGGGATaGGTGGAAACAGTGGGGCGT +
Preference number: 2 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFGWLRG*VETVGR
Trigger: ACGCCCCACTGTTTCCACCCATCCCCTTAGCCAACC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 2 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 2 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 2 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCTAGTCACTGCTACTTaGTACAAAGCATTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: NAHLGFPLVALPGALGDCLVTAT*YKAFPS
Trigger: ACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 2 (lower is better)
Translates to: NAHLGFPLVALPGALGDCQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 2 (lower is better)
Translates to: GAATKSMELPRTFYTPGRQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 2 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 2 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 2 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 2 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 2 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CAA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGGA +
Preference number: 2 (lower is better)
Translates to: YLFWQYPIQVSVLPC*KVVFTKAHILKLFG
Trigger: TCCAAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR GCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTTGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 2 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFCGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCTAGTCACTGCTACTTaGTACAAAGCATTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFLVTAT*YKAFPS
Trigger: ACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CAA 90 bp AAACTACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATT +
Preference number: 2 (lower is better)
Translates to: KLPILAVSNSGFSAP*FESGLHKSPHFKAI
Trigger: AATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 2 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CCA 72 bp AGTAAGGTAAAGTCCAGGGAGAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGG +
Preference number: 3 (lower is better)
Translates to: SKVKSREKECAP*FSLSGTTRSTR
Trigger: CCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACTTTACCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: NAHLGFPLVALPGALGDCRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 3 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLENLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 3 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFRAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: GAATKSMELPRTFYTPGRRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 3 (lower is better)
Translates to: NAHLGFPLVALPGALGDCNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR GCA 72 bp AATGGGGAAGAGAATCCAGAAACACGACAACAAAGCTaGTCTAACCAATGTTCCAGAGAAAGCCACCCTCAA +
Preference number: 3 (lower is better)
Translates to: NGEENPETRQQS*SNQCSRESHPQ
Trigger: TTGAGGGTGGCTTTCTCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGTTTCTGGATTCTCTTCCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTTCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 3 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR-3UTR CAA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 3 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTCTCGGGAAGCTCAATaGCAGGCTGCTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALSREAQ*QAAAAF
Trigger: GAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGATCTCGGGAAGCTCAATaGCAGGCTGCTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGSREAQ*QAAAAF
Trigger: GAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGA...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALAGTGS*SGSLQE
Trigger: CTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRFLPTA*QVGQET
Trigger: TGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATCTCGGGAAGCTCAATaGCAGGCTGCTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRSREAQ*QAAAAF
Trigger: GAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTGTGGGTCCCGAAGTaGCGGGTACAGCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRLWVPK*RVQHRV
Trigger: GACTCGGTGCTGTACCCGCCACTTCGGGACCCACAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000416005.6
CDS-3UTR CCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRFLPTA*QVGQET
Trigger: TGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTCTTGGGCCATTCCTTaGCCAGTTCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALSWAIP*PVQQRP
Trigger: TGGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGGTTGGCTAAGGGGATaGGTGGAAACAGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRGWLRG*VETVGR
Trigger: ACGCCCCACTGTTTCCACCCATCCCCTTAGCCAACC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGGTTGGCTAAGGGGATaGGTGGAAACAGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGGWLRG*VETVGR
Trigger: ACGCCCCACTGTTTCCACCCATCCCCTTAGCCAACC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALCSDLR*YASPAF
Trigger: GAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCTTCTGCTCCTGTGCTaGTGCCTCCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALLLLLC*CLRFSS
Trigger: AGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGACCTTCTGCTCCTGTaGTGCTGCCTCCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEDLLLL*CCLRFS
Trigger: AGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAGGTC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALSMPGC*RLLRDL
Trigger: AAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLESSMPG*CRLLRD
Trigger: GTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCT...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACCTGACCCTTCGACATaGGAAGTAGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRPDPST*EVAAGL
Trigger: CAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAGG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGATGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGCSDLR*YASPAF
Trigger: GAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCA...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTATAGGCCCATGCTCTaGCCTCAGGTGATATGCAAG +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALYRPML*PQVICK
Trigger: CTTGCATATCACCTGAGGTCAGAGCATGGGCCTATA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTGGCAGAACGTCTCTaGACTCGGCCCCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRLAERL*TRPPLF
Trigger: AAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGTACAAGAGCCCAGGTaGGCTTTAAGGCCAGATACA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALVQEPR*ALRPDT
Trigger: TGTATCTGGCCTTAAAGCTCACCTGGGCTCTTGTAC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGAGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACTGCTCCTGTGCTGCTaGCTCCGCTTTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLELLLCC*LRFSSS
Trigger: AGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGAGACCTTCTGCTCCTGTaGTGCTGCCTCCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRDLLLL*CCLRFS
Trigger: AGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAGGTC...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATTCTTAGAGACCTTCTaGTCCTGTGCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEFLETF*SCAAAS
Trigger: GGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAGTGTCAAGGAGTCATaGAGCAGGTCGGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRSVKES*SRSASK
Trigger: CTTTGACGCCGACCTGCTGCATGACTCCTTGACACT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGTACAGCACCGAGTCTaGAAGACATCACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRVQHRV*KTSLPL
Trigger: GAGAGGGAGTGATGTCTTCCAGACTCGGTGCTGTAC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGCCAGCTCCTGTAGGTaGTATACAGCTATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALASSCR*YTAILA
Trigger: TGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATCTTGGGCCATTCCTTaGCCAGTTCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRSWAIP*PVQQRP
Trigger: TGGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACTCCTCTCCCGGATGTaGGCTCGGCTCCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSLLSRM*ARLRLA
Trigger: GGCTAGGCGGAGCCGAGCCCACATCCGGGAGAGGAG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCTCCTCTCCCGGATGTaGGCTCGGCTCCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHLLSRM*ARLRLA
Trigger: GGCTAGGCGGAGCCGAGCCCACATCCGGGAGAGGAG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGATTTGGGATTGGGCTaGGTTTTAGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGDLGLG*VLGRCF
Trigger: GAAGCAACGGCCTAAAACTCAGCCCAATCCCAAATC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGATTTGGGATTGGGCTaGGTTTTAGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRDLGLG*VLGRCF
Trigger: GAAGCAACGGCCTAAAACTCAGCCCAATCCCAAATC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATCTCACGCATGCACCTaGGCTTTCCCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLESHACT*AFPVSL
Trigger: TAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTCTCACGCATGCACCTaGGCTTTCCCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRSHACT*AFPVSL
Trigger: TAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTCTGGCTGTCCTaGCTCTGGAAAGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGALWLS*LWKEGY
Trigger: ATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGCACTCTGGCTGTCCTaGCTCTGGAAAGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRALWLS*LWKEGY
Trigger: ATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTGGACGGAGTTGATGTaGTACTTGACACCACTCTCT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALWTELM*YLTPLS
Trigger: AGAGAGTGGTGTCAAGTATCACATCAACTCCGTCCA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTACAACCCTCATCTACTaGAAGGGCTTTAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALTTLIY*KGFKGT
Trigger: TGTGCCCTTAAAGCCCTTTCAGTAGATGAGGGTTGT...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAATCCTCGTGCTCCTCTaGTGCTTAAAGGTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGILVLL*CLKVVG
Trigger: ACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGAT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
CDS-3UTR GCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGCTCCTCCAAACTGCCTaGTGCATAAACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRLLQTA*CINWWF
Trigger: GAACCACCAGTTTATGCAGCAGGCAGTTTGGAGGAG...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCTGCTCCTGTGCTGCTaGCTCCGCTTTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCLLLCC*LRFSSS
Trigger: AGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGCTCCTGTGCTGCTaGCTCCGCTTTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRLLLCC*LRFSSS
Trigger: AGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTCTTAGAGACCTTCTaGTCCTGTGCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRFLETF*SCAAAS
Trigger: GGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCSMPGC*RLLRDL
Trigger: AAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGA...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTTACTTTCTGGAACTGTaGTGGCACTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCYFLEL*WHWLLL
Trigger: GAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTA...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGCCTGCTGCATAAACTaGTGGTTCCTTCCGAATACG +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRACCIN*WFLPNT
Trigger: CGTATTCGGAAGGAACCACCAGTTTATGCAGCAGGC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGCCAGCTCCTGTAGGTaGTATACAGCTATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRASSCR*YTAILA
Trigger: TGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTTTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALLCSTS*LKVGSP
Trigger: AGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAA...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTCCTCTCCCGGATGTaGGCTCGGCTCCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLLSRM*ARLRLA
Trigger: GGCTAGGCGGAGCCGAGCCCACATCCGGGAGAGGAG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGGAGCACTTTTACACTaGCTGCCTATTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEGALLH*LPISFL
Trigger: GAGGAAGGAAATAGGCAGTCAGTGTAAAAGTGCTCC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGGAGCACTTTTACACTaGCTGCCTATTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGGALLH*LPISFL
Trigger: GAGGAAGGAAATAGGCAGTCAGTGTAAAAGTGCTCC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACTCCAAACTGCCTGCTaGATAAACTGGTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLELQTAC*INWWFL
Trigger: AAGGAACCACCAGTTTATGCAGCAGGCAGTTTGGAG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAATTGCTCCTCCAAACTaGCTGCTGCATAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGIAPPN*LLHKLV
Trigger: CACCAGTTTATGCAGCAGGCAGTTTGGAGGAGCAAT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACATCTTTTCCAGCTCTaGAGCCCCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGHLFQL*SPFATF
Trigger: AAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRAGTGS*SGSLQE
Trigger: CTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGATTGTGGGTCCCGAAGTaGCGGGTACAGCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGLWVPK*RVQHRV
Trigger: GACTCGGTGCTGTACCCGCCACTTCGGGACCCACAA...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000416005.6
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCCTTTCCCTCTCACTTaGCTCATCTATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALPFPLT*LIYFIS
Trigger: GGAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALGIQLS*QNVSEL
Trigger: GAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRLCSTS*LKVGSP
Trigger: AGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRKECAP*FSLSGT
Trigger: AGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGGTTGGCTAAGGGGATaGGTGGAAACAGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRGWLRG*VETVGR
Trigger: ACGCCCCACTGTTTCCACCCATCCCCTTAGCCAACC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGAGGAGCACTTTTACACTaGCTGCCTATTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRGALLH*LPISFL
Trigger: GAGGAAGGAAATAGGCAGTCAGTGTAAAAGTGCTCC...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACAGTGCTCCCTTGTTTaGAAGTGGTCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGQCSLV*KWSSQK
Trigger: CTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAGGGCACACTGCCAATaGAAATGCAGAGTGCATATA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRRAHCQ*KCRVHI
Trigger: TATATGCACTCTGCATTTTCATTGGCAGTGTGCCCT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLLVLLC*LKVVGP
Trigger: GGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAG...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCTCCAAACTGCCTGCTaGATAAACTGGTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCLQTAC*INWWFL
Trigger: AAGGAACCACCAGTTTATGCAGCAGGCAGTTTGGAG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTATTGCTCCTCCAAACTaGCTGCTGCATAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCIAPPN*LLHKLV
Trigger: CACCAGTTTATGCAGCAGGCAGTTTGGAGGAGCAAT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACATCTTTTCCAGCTCTaGAGCCCCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRHLFQL*SPFATF
Trigger: AAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLSSMPG*CRLLRD
Trigger: GTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCT...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATCTCGGGAAGCTCAATaGCAGGCTGCTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSSREAQ*QAAAAF
Trigger: GAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFAGTGS*SGSLQE
Trigger: CTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGAGTGS*SGSLQE
Trigger: CTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGC...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGTTGTGGGTCCCGAAGTaGCGGGTACAGCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVLWVPK*RVQHRV
Trigger: GACTCGGTGCTGTACCCGCCACTTCGGGACCCACAA...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000416005.6
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFFLPTA*QVGQET
Trigger: TGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAA...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACCTTTCCCTCTCACTTaGCTCATCTATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGPFPLT*LIYFIS
Trigger: GGAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAGCCTTCGACCTATATaGTTTTCCACAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRSLRPI*FSTVVT
Trigger: TGTCACCACTGTGGAAAACCATATAGGTCGAAGGCT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRGIQLS*QNVSEL
Trigger: GAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCTAGTCACTGCTACTTaGTACAAAGCATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALLVTAT*YKAFPS
Trigger: ACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCKECAP*FSLSGT
Trigger: AGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGGCGTCAAAGAACACTaGAAACATCTTTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALGVKEH*KHLSES
Trigger: ACTCTCAGAAAGATGTTTCCAGTGTTCTTTGACGCC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTCCTTTATGGAGCACTaGGTCCTGCTAGGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRSFMEH*VLLGGY
Trigger: GTACCCGCCTAGCAGGACCCAGTGCTCCATAAAGGA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLELKESS*GIVYWK
Trigger: TTTCCAGTACACTATCCCTCATGATGACTCCTTAAG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACCTGACCCTTCGACATaGGAAGTAGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGPDPST*EVAAGL
Trigger: CAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAGG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACTTTGCCACATTTTCTaGCATGGTAGAGATATCCCA +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGLCHIF*HGRDIP
Trigger: TGGGATATCTCTACCATGTCAGAAAATGTGGCAAAG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLCSDLR*YASPAF
Trigger: GAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRCSDLR*YASPAF
Trigger: GAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRFLPRL*LVFGGF
Trigger: AAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEFLPRL*LVFGGF
Trigger: AAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACAGTGCTCCCTTGTTTaGAAGTGGTCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRQCSLV*KWSSQK
Trigger: CTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTTTCATTTCTCCTCCCTaGCAACCCTCATCTACTGAA +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCFISPP*QPSSTE
Trigger: TTCAGTAGATGAGGGTTGTCAGGGAGGAGAAATGAA...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFLVLLC*LKVVGP
Trigger: GGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCRFSSS*CRCFIF
Trigger: GAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRRFSSS*CRCFIF
Trigger: GAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCTGCTCCTGTGCTGCTaGCTCCGCTTTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRLLLCC*LRFSSS
Trigger: AGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGGACCTTCTGCTCCTGTaGTGCTGCCTCCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQDLLLL*CCLRFS
Trigger: AGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAGGTC...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTTCTTAGAGACCTTCTaGTCCTGTGCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRFLETF*SCAAAS
Trigger: GGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLSMPGC*RLLRDL
Trigger: AAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQSSMPG*CRLLRD
Trigger: GTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCT...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFAGTGS*SGSLQE
Trigger: CTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGC...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTACTTTCTGGAACTGTaGTGGCACTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLYFLEL*WHWLLL
Trigger: GAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGCAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLECGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAACACGACAACAAAGCTaGTCTAACCAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGTRQQS*SNQCSR
Trigger: TCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGGTACAGCACCGAGTCTaGAAGACATCACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLVQHRV*KTSLPL
Trigger: GAGAGGGAGTGATGTCTTCCAGACTCGGTGCTGTAC...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTATGAGAAGTAGCAGCTaGCTTGATTCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALMRSSS*LDSSHL
Trigger: AAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCAT...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKFLPTA*QVGQET
Trigger: TGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACCTTTCCCTCTCACTTaGCTCATCTATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRPFPLT*LIYFIS
Trigger: GGAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGCTTTTGGTTGTTGTTaGGTTTACAACGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEAFGCC*VYNEPV
Trigger: GACTGGTTCGTTGTAAACCCAACAACAACCAAAAGC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGGCTTTTGGTTGTTGTTaGGTTTACAACGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRAFGCC*VYNEPV
Trigger: GACTGGTTCGTTGTAAACCCAACAACAACCAAAAGC...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCTTTTGGTTGTTGTTaGGTTTACAACGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGAFGCC*VYNEPV
Trigger: GACTGGTTCGTTGTAAACCCAACAACAACCAAAAGC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGGCGTCAAAGAACACTaGAAACATCTTTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGGVKEH*KHLSES
Trigger: ACTCTCAGAAAGATGTTTCCAGTGTTCTTTGACGCC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCLKESS*GIVYWK
Trigger: TTTCCAGTACACTATCCCTCATGATGACTCCTTAAG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCCTGACCCTTCGACATaGGAAGTAGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVPDPST*EVAAGL
Trigger: CAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAGG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFCSDLR*YASPAF
Trigger: GAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATTTGGCAGAACGTCTCTaGACTCGGCCCCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHLAERL*TRPPLF
Trigger: AAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAA...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGGTACAAGAGCCCAGGTaGGCTTTAAGGCCAGATACA +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLVQEPR*ALRPDT
Trigger: TGTATCTGGCCTTAAAGCTCACCTGGGCTCTTGTAC...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRFLPRL*LVFGGF
Trigger: AAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCGCCTATAGTTGGCCTTaGGAGGGAGCTCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFAYSWP*EGALWA
Trigger: TGCCCAAAGAGCTCCCTCTCAAGGCCAACTATAGGC...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGATCATAGCTATGGATaGGGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVDHSYG*GLGLQE
Trigger: TTCCTGGAGCCCGAGGCCTCATCCATAGCTATGATC...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHLVLLC*LKVVGP
Trigger: GGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSLVLLC*LKVVGP
Trigger: GGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGRFSER*WKITHW
Trigger: CCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGCTCCTCCAAACTGCCTaGTGCATAAACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLLLQTA*CINWWF
Trigger: GAACCACCAGTTTATGCAGCAGGCAGTTTGGAGGAG...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGAATTTCTAAGTACCATTaGTCCTCCAAACTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRISKYH*SSKLPA
Trigger: AGCAGGCAGTTTGGAGGAGCAATGGTACTTAGAAAT...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTATTTCTAAGTACCATTaGTCCTCCAAACTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCISKYH*SSKLPA
Trigger: AGCAGGCAGTTTGGAGGAGCAATGGTACTTAGAAAT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCTTCTGCTCCTGTGCTaGTGCCTCCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFLLLLC*CLRFSS
Trigger: AGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAGACCTTCTGCTCCTGTaGTGCTGCCTCCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSDLLLL*CCLRFS
Trigger: AGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAGGTC...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACACTTTTACACTGACTaGCTATTTCCTTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGHFYTD*LFPSSF
Trigger: AAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTACACGACAACAAAGCTaGTCTAACCAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCTRQQS*SNQCSR
Trigger: TCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGT...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAATTGCTCCTCCAAACTaGCATAAAGCTTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGIAPPN*HKAYAS
Trigger: AGAAGCATAAGCTTTATGGCAGTTTGGAGGAGCAAT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416005.6
CDS-3UTR CCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAATTTTCGGAAAGATGCTaGAAAATCACTCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEFSERC*KITHWF
Trigger: GAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAA...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAATGAGAAGTAGCAGCTaGCTTGATTCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEMRSSS*LDSSHL
Trigger: AAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCAT...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGGCCTGCTGCATAAACTaGTGGTTCCTTCCGAATACG +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLACCIN*WFLPNT
Trigger: CGTATTCGGAAGGAACCACCAGTTTATGCAGCAGGC...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGCCTGCTGCATAAACTaGTGGTTCCTTCCGAATACG +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRACCIN*WFLPNT
Trigger: CGTATTCGGAAGGAACCACCAGTTTATGCAGCAGGC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGCCAGCTCCTGTAGGTaGTATACAGCTATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRASSCR*YTAILA
Trigger: TGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATCTTGGGCCATTCCTTaGCCAGTTCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSSWAIP*PVQQRP
Trigger: TGGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAGCCCTGTCCCAGGCTaGCGGGTACAGCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKSPVPG*RVQHRV
Trigger: GACTCGGTGCTGTACCCGCCAGCCTGGGACAGGGCT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413371.6
CDS-3UTR TCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQLHPCQ*TKLFPT
Trigger: TGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGLHPCQ*TKLFPT
Trigger: TGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGATATAGGCCCATGCTCTaGCCTCAGGTGATATGCAAG +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGYRPML*PQVICK
Trigger: CTTGCATATCACCTGAGGTCAGAGCATGGGCCTATA...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGCACTCTGGCTGTCCTaGCTCTGGAAAGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFALWLS*LWKEGY
Trigger: ATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTTGGCAGAACGTCTCTaGACTCGGCCCCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLAERL*TRPPLF
Trigger: AAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTGGACGGAGTTGATGTaGTACTTGACACCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLWTELM*YLTPLS
Trigger: AGAGAGTGGTGTCAAGTATCACATCAACTCCGTCCA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCAGCACAGGTCCCCGTaGCAACAGCATCACATCTGC +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFQHRSP*QQHHIC
Trigger: GCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGACAACCCTCATCTACTaGAAGGGCTTTAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLTTLIY*KGFKGT
Trigger: TGTGCCCTTAAAGCCCTTTCAGTAGATGAGGGTTGT...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCTCCAAACTGCCTGCTaGATAAACTGGTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRLQTAC*INWWFL
Trigger: AAGGAACCACCAGTTTATGCAGCAGGCAGTTTGGAG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGCAAGTAAACATTTCCTaGTTGCAGTTTTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRQVNIS*LQFSMC
Trigger: ACACATGGAAAACTGCAAGCAGGAAATGTTTACTTG...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCTTCTGCTCCTGTGCTaGTGCCTCCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFLLLLC*CLRFSS
Trigger: AGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCTTCTGCTCCTGTGCTaGTGCCTCCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVLLLLC*CLRFSS
Trigger: AGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATTCTTAGAGACCTTCTaGTCCTGTGCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSFLETF*SCAAAS
Trigger: GGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATTACTTTCTGGAACTGTaGTGGCACTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHYFLEL*WHWLLL
Trigger: GAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTA...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGATATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCAGTGTCAAGGAGTCATaGAGCAGGTCGGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFSVKES*SRSASK
Trigger: CTTTGACGCCGACCTGCTGCATGACTCCTTGACACT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGAGTGTCAAGGAGTCATaGAGCAGGTCGGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVSVKES*SRSASK
Trigger: CTTTGACGCCGACCTGCTGCATGACTCCTTGACACT...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTACAGCACCGAGTCTaGAAGACATCACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVVQHRV*KTSLPL
Trigger: GAGAGGGAGTGATGTCTTCCAGACTCGGTGCTGTAC...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCGTACAGCACCGAGTCTaGAAGACATCACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFVQHRV*KTSLPL
Trigger: GAGAGGGAGTGATGTCTTCCAGACTCGGTGCTGTAC...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGGCCTGCTGCATAAACTaGTGGTTCCTTCCGAATACG +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQACCIN*WFLPNT
Trigger: CGTATTCGGAAGGAACCACCAGTTTATGCAGCAGGC...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTCTTGGGCCATTCCTTaGCCAGTTCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKSWAIP*PVQQRP
Trigger: TGGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGCTTTTCAAAGCTTTTaGTTGTTGTTGGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: PSTGPRDNSITSAFLGALAFQSF*LLLGLQ
Trigger: TTGTAAACCCAACAACAACCAAAAGCTTTGAAAAGC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGGTTGGCTAAGGGGATaGGTGGAAACAGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFGWLRG*VETVGR
Trigger: ACGCCCCACTGTTTCCACCCATCCCCTTAGCCAACC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGACAAAACTACCTATTCTaGCAGTATCCAATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGQNYLF*QYPIQV
Trigger: AACCTGAATTGGATACTGCCAGAATAGGTAGTTTTG...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCCTGACCCTTCGACATaGGAAGTAGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFPDPST*EVAAGL
Trigger: CAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAGG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGATTTGGGATTGGGCTaGGTTTTAGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVDLGLG*VLGRCF
Trigger: GAAGCAACGGCCTAAAACTCAGCCCAATCCCAAATC...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSLHPCQ*TKLFPT
Trigger: TGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATCTCACGCATGCACCTaGGCTTTCCCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSSHACT*AFPVSL
Trigger: TAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTCTCACGCATGCACCTaGGCTTTCCCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFSHACT*AFPVSL
Trigger: TAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGA...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGATGGACGGAGTTGATGTaGTACTTGACACCACTCTCT +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGWTELM*YLTPLS
Trigger: AGAGAGTGGTGTCAAGTATCACATCAACTCCGTCCA...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGCAGTGCTCCCTTGTTTaGAAGTGGTCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLQCSLV*KWSSQK
Trigger: CTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTG...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTTCATTTCTCCTCCCTaGCAACCCTCATCTACTGAA +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLFISPP*QPSSTE
Trigger: TTCAGTAGATGAGGGTTGTCAGGGAGGAGAAATGAA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCTCCTCCAAACTGCCTaGTGCATAAACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVLLQTA*CINWWF
Trigger: GAACCACCAGTTTATGCAGCAGGCAGTTTGGAGGAG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCATCTTTTCCAGCTCTaGAGCCCCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFHLFQL*SPFATF
Trigger: AAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKSMPGC*RLLRDL
Trigger: AAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFSSMPG*CRLLRD
Trigger: GTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTACTTTCTGGAACTGTaGTGGCACTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKYFLEL*WHWLLL
Trigger: GAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATGCCAGCTCCTGTAGGTaGTATACAGCTATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHASSCR*YTAILA
Trigger: TGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTTTATGATTAGTCTTTaGGGGCTTTACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRFMISL*GLYFLE
Trigger: TTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGATTTATGATTAGTCTTTaGGGGCTTTACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGFMISL*GLYFLE
Trigger: TTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAA...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFKECAP*FSLSGT
Trigger: AGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLENIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLHPCQ*TKLFPT
Trigger: TGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTATAGGCCCATGCTCTaGCCTCAGGTGATATGCAAG +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKYRPML*PQVICK
Trigger: CTTGCATATCACCTGAGGTCAGAGCATGGGCCTATA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAGGGCACACTGCCAATaGAAATGCAGAGTGCATATA +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGRAHCQ*KCRVHI
Trigger: TATATGCACTCTGCATTTTCATTGGCAGTGTGCCCT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATACAACCCTCATCTACTaGAAGGGCTTTAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHTTLIY*KGFKGT
Trigger: TGTGCCCTTAAAGCCCTTTCAGTAGATGAGGGTTGT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGTTCATTTCTCCTCCCTaGCAACCCTCATCTACTGAA +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQFISPP*QPSSTE
Trigger: TTCAGTAGATGAGGGTTGTCAGGGAGGAGAAATGAA...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCATTGCTCCTCCAAACTaGCTGCTGCATAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFIAPPN*LLHKLV
Trigger: CACCAGTTTATGCAGCAGGCAGTTTGGAGGAGCAAT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAATTGCTCCTCCAAACTaGCTGCTGCATAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSIAPPN*LLHKLV
Trigger: CACCAGTTTATGCAGCAGGCAGTTTGGAGGAGCAAT...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACATCTTTTCCAGCTCTaGAGCCCCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSHLFQL*SPFATF
Trigger: AAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQRFSSS*CRCFIF
Trigger: GAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRCGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGACACGACAACAAAGCTaGTCTAACCAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRTRQQS*SNQCSR
Trigger: TCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAGCCTTCGACCTATATaGTTTTCCACAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFSLRPI*FSTVVT
Trigger: TGTCACCACTGTGGAAAACCATATAGGTCGAAGGCT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFGIQLS*QNVSEL
Trigger: GAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQGIQLS*QNVSEL
Trigger: GAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACC...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGGCCAGCTCCTGTAGGTaGTATACAGCTATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKASSCR*YTAILA
Trigger: TGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSLCSTS*LKVGSP
Trigger: AGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFLCSTS*LKVGSP
Trigger: AGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAA...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTGCTTTTCAAAGCTTTTaGTTGTTGTTGGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: NAHLGFPLVALPGALGDCAFQSF*LLLGLQ
Trigger: TTGTAAACCCAACAACAACCAAAAGCTTTGAAAAGC...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCTAGTCACTGCTACTTaGTACAAAGCATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRLVTAT*YKAFPS
Trigger: ACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSKECAP*FSLSGT
Trigger: AGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGLKESS*GIVYWK
Trigger: TTTCCAGTACACTATCCCTCATGATGACTCCTTAAG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACCTGACCCTTCGACATaGGAAGTAGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKPDPST*EVAAGL
Trigger: CAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAGG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGATTTGGGATTGGGCTaGGTTTTAGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFDLGLG*VLGRCF
Trigger: GAAGCAACGGCCTAAAACTCAGCCCAATCCCAAATC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFLHPCQ*TKLFPT
Trigger: TGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCTTTGCCACATTTTCTaGCATGGTAGAGATATCCCA +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQLCHIF*HGRDIP
Trigger: TGGGATATCTCTACCATGTCAGAAAATGTGGCAAAG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATGGTTTTCCACAGTGGTaGCATTTCAGGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHGFPQW*HFRVIF
Trigger: AAAGATGACCCTGAAATGTCACCACTGTGGAAAACC...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGCACTCTGGCTGTCCTaGCTCTGGAAAGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFALWLS*LWKEGY
Trigger: ATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGTACAAGAGCCCAGGTaGGCTTTAAGGCCAGATACA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFVQEPR*ALRPDT
Trigger: TGTATCTGGCCTTAAAGCTCACCTGGGCTCTTGTAC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCAGTGCTCCCTTGTTTaGAAGTGGTCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFQCSLV*KWSSQK
Trigger: CTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATAGGGCACACTGCCAATaGAAATGCAGAGTGCATATA +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHRAHCQ*KCRVHI
Trigger: TATATGCACTCTGCATTTTCATTGGCAGTGTGCCCT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTTCATTTCTCCTCCCTaGCAACCCTCATCTACTGAA +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFFISPP*QPSSTE
Trigger: TTCAGTAGATGAGGGTTGTCAGGGAGGAGAAATGAA...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRRFSER*WKITHW
Trigger: CCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTCCAAACTGCCTGCTaGATAAACTGGTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLQTAC*INWWFL
Trigger: AAGGAACCACCAGTTTATGCAGCAGGCAGTTTGGAG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCTCCTCCAAACTGCCTaGTGCATAAACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFLLQTA*CINWWF
Trigger: GAACCACCAGTTTATGCAGCAGGCAGTTTGGAGGAG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSRFSSS*CRCFIF
Trigger: GAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGACCTTCTGCTCCTGTaGTGCTGCCTCCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKDLLLL*CCLRFS
Trigger: AGAAAAGCGGAGGCAGCAGCACAGGAGCAGAAGGTC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGACAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFCGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGTGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQCGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAACACGACAACAAAGCTaGTCTAACCAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGTRQQS*SNQCSR
Trigger: TCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTTTTCGGAAAGATGCTaGAAAATCACTCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRFSERC*KITHWF
Trigger: GAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCCTTTCCCTCTCACTTaGCTCATCTATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVPFPLT*LIYFIS
Trigger: GGAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGGCTTTTGGTTGTTGTTaGGTTTACAACGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQAFGCC*VYNEPV
Trigger: GACTGGTTCGTTGTAAACCCAACAACAACCAAAAGC...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHLKESS*GIVYWK
Trigger: TTTCCAGTACACTATCCCTCATGATGACTCCTTAAG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVLKESS*GIVYWK
Trigger: TTTCCAGTACACTATCCCTCATGATGACTCCTTAAG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCTTTGCCACATTTTCTaGCATGGTAGAGATATCCCA +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVLCHIF*HGRDIP
Trigger: TGGGATATCTCTACCATGTCAGAAAATGTGGCAAAG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGTTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVFLPRL*LVFGGF
Trigger: AAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAA...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCCTTACACAAACAGCTaGAAGAATCTTCACTCAGTC +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFPYTNS*KNLHSV
Trigger: GACTGAGTGAAGATTCTTTCAGCTGTTTGTGTAAGG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTACAACCCTCATCTACTaGAAGGGCTTTAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFTTLIY*KGFKGT
Trigger: TGTGCCCTTAAAGCCCTTTCAGTAGATGAGGGTTGT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCAAGTAAACATTTCCTaGTTGCAGTTTTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRQVNIS*LQFSMC
Trigger: ACACATGGAAAACTGCAAGCAGGAAATGTTTACTTG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACTGCTCCTGTGCTGCTaGCTCCGCTTTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKLLLCC*LRFSSS
Trigger: AGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATTCTTAGAGACCTTCTaGTCCTGTGCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKFLETF*SCAAAS
Trigger: GGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCACTTTTACACTGACTaGCTATTTCCTTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQHFYTD*LFPSSF
Trigger: AAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCAACAGCATCACATCTaGTTTCCTAGGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFQQHHI*FPRSTF
Trigger: AAAAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTGTGGGTCTAGTCACTaGTACTTGGTACAAAGCATT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFCGSSH*YLVQSI
Trigger: AATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAGTGTCAAGGAGTCATaGAGCAGGTCGGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKSVKES*SRSASK
Trigger: CTTTGACGCCGACCTGCTGCATGACTCCTTGACACT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGTACAGCACCGAGTCTaGAAGACATCACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKVQHRV*KTSLPL
Trigger: GAGAGGGAGTGATGTCTTCCAGACTCGGTGCTGTAC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAACTATTATCCTTTATaGAGCACTGGGTCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFNYYPL*STGSCY
Trigger: ATAGCAGGACCCAGTGCTCCATAAAGGATAATAGTT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355467.6
ENST00000413371.6
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCTCCGGCTTTCAAAATaGGCAAACTATTATGATTTG +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRLRLSK*ANYYDL
Trigger: CAAATCATAATAGTTTGCCCATTTTGAAAGCCGGAG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCCTTTCCCTCTCACTTaGCTCATCTATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKPFPLT*LIYFIS
Trigger: GGAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTTTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFLCSTS*LKVGSP
Trigger: AGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAA...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCGCTTTTGGTTGTTGTTaGGTTTACAACGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFAFGCC*VYNEPV
Trigger: GACTGGTTCGTTGTAAACCCAACAACAACCAAAAGC...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAAGGAATGCGCACCTTaGTTTTCCCTTAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFKECAP*FSLSGT
Trigger: AGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAACTATTATCCTTTATaGAGCACTGGGTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGNYYPL*STGSCS
Trigger: AGAACAGGACCCAGTGCTCCATAAAGGATAATAGTT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
3UTR CAA 72 bp TGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: WQYPIQVSVLPC*KVVFTKAHILK
Trigger: CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
3UTR CAA 72 bp ATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTT +
Preference number: 4 (lower is better)
Translates to: ILAVSNSGFSAP*FESGLHKSPHF
Trigger: AAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTATTATGATTTGCCATaGCATGATACTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFYYDLP*HDTSSL
Trigger: CAGGGATGAAGTATCATGTCATGGCAAATCATAATA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATCTCACGCATGCACCTaGGCTTTCCCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKSHACT*AFPVSL
Trigger: TAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGGTTTTCCACAGTGGTaGCATTTCAGGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFGFPQW*HFRVIF
Trigger: AAAGATGACCCTGAAATGTCACCACTGTGGAAAACC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATATAGGCCCATGCTCTaGCCTCAGGTGATATGCAAG +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKYRPML*PQVICK
Trigger: CTTGCATATCACCTGAGGTCAGAGCATGGGCCTATA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGTACAAGAGCCCAGGTaGGCTTTAAGGCCAGATACA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKVQEPR*ALRPDT
Trigger: TGTATCTGGCCTTAAAGCTCACCTGGGCTCTTGTAC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAGGGCACACTGCCAATaGAAATGCAGAGTGCATATA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFRAHCQ*KCRVHI
Trigger: TATATGCACTCTGCATTTTCATTGGCAGTGTGCCCT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVRFSER*WKITHW
Trigger: CCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCT...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFRFSER*WKITHW
Trigger: CCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHRFSER*WKITHW
Trigger: CCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGATTTCTAAGTACCATTaGTCCTCCAAACTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKISKYH*SSKLPA
Trigger: AGCAGGCAGTTTGGAGGAGCAATGGTACTTAGAAAT...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCACTTTTACACTGACTaGCTATTTCCTTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVHFYTD*LFPSSF
Trigger: AAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCACTTTTACACTGACTaGCTATTTCCTTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHHFYTD*LFPSSF
Trigger: AAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGATATTTCTTTTGTCATTaGCAAACATTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGYFFCH*QTFPRS
Trigger: AGACCTGGGGAATGTTTGGCAATGACAAAAGAAATA...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCAACTATTATCCTTTATaGAGCACTGGGTCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFNYYPL*STGSCY
Trigger: ATAGCAGGACCCAGTGCTCCATAAAGGATAATAGTT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355467.6
ENST00000413371.6
CDS-3UTR CCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATATGAGAAGTAGCAGCTaGCTTGATTCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHMRSSS*LDSSHL
Trigger: AAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCAT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGATGAGAAGTAGCAGCTaGCTTGATTCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVMRSSS*LDSSHL
Trigger: AAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCAT...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCATGAGAAGTAGCAGCTaGCTTGATTCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFMRSSS*LDSSHL
Trigger: AAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCAT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCTCCGGCTTTCAAAATaGGCAAACTATTATGATTTG +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQLRLSK*ANYYDL
Trigger: CAAATCATAATAGTTTGCCCATTTTGAAAGCCGGAG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCTCCGGCTTTCAAAATaGGCAAACTATTATGATTTG +
Preference number: 4 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFLRLSK*ANYYDL
Trigger: CAAATCATAATAGTTTGCCCATTTTGAAAGCCGGAG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTAGCCTTCGACCTATATaGTTTTCCACAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFSLRPI*FSTVVT
Trigger: TGTCACCACTGTGGAAAACCATATAGGTCGAAGGCT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFGIQLS*QNVSEL
Trigger: GAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGCTTTTCAAAGCTTTTaGTTGTTGTTGGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRAFQSF*LLLGLQ
Trigger: TTGTAAACCCAACAACAACCAAAAGCTTTGAAAAGC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTTTATGATTAGTCTTTaGGGGCTTTACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GAATKSMELPRTFYTPGRFMISL*GLYFLE
Trigger: TTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGGGCGTCAAAGAACACTaGAAACATCTTTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKGVKEH*KHLSES
Trigger: ACTCTCAGAAAGATGTTTCCAGTGTTCTTTGACGCC...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCATATTATGATTTGCCATaGCATGATACTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSYYDLP*HDTSSL
Trigger: CAGGGATGAAGTATCATGTCATGGCAAATCATAATA...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCTTTGCCACATTTTCTaGCATGGTAGAGATATCCCA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFLCHIF*HGRDIP
Trigger: TGGGATATCTCTACCATGTCAGAAAATGTGGCAAAG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGGAGCACTTTTACACTaGCTGCCTATTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKGALLH*LPISFL
Trigger: GAGGAAGGAAATAGGCAGTCAGTGTAAAAGTGCTCC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAACAACCCTCATCTACTaGAAGGGCTTTAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKTTLIY*KGFKGT
Trigger: TGTGCCCTTAAAGCCCTTTCAGTAGATGAGGGTTGT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTATTTCTAAGTACCATTaGTCCTCCAAACTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFISKYH*SSKLPA
Trigger: AGCAGGCAGTTTGGAGGAGCAATGGTACTTAGAAAT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACATCTTTTCCAGCTCTaGAGCCCCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKHLFQL*SPFATF
Trigger: AAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCACTTTTACACTGACTaGCTATTTCCTTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKHFYTD*LFPSSF
Trigger: AAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTACACGACAACAAAGCTaGTCTAACCAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFTRQQS*SNQCSR
Trigger: TCTGGAACATTGGTTAGAGCAGCTTTGTTGTCGTGT...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGAATGAAAATGCAGAGTaGATATACCATGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQNENAE*IYHVLN
Trigger: GTTAAGGACATGGTATATGCACTCTGCATTTTCATT...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAATGAAAATGCAGAGTaGATATACCATGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGNENAE*IYHVLN
Trigger: GTTAAGGACATGGTATATGCACTCTGCATTTTCATT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTTTTCGGAAAGATGCTaGAAAATCACTCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKFSERC*KITHWF
Trigger: GAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCTCCGGCTTTCAAAATaGGCAAACTATTATGATTTG +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFLRLSK*ANYYDL
Trigger: CAAATCATAATAGTTTGCCCATTTTGAAAGCCGGAG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCAAAACTACCTATTCTaGCAGTATCCAATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFQNYLF*QYPIQV
Trigger: AACCTGAATTGGATACTGCCAGAATAGGTAGTTTTG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCAAAACTACCTATTCTaGCAGTATCCAATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHQNYLF*QYPIQV
Trigger: AACCTGAATTGGATACTGCCAGAATAGGTAGTTTTG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGTATTATGATTTGCCATaGCATGATACTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKYYDLP*HDTSSL
Trigger: CAGGGATGAAGTATCATGTCATGGCAAATCATAATA...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACAGTGCTCCCTTGTTTaGAAGTGGTCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKQCSLV*KWSSQK
Trigger: CTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCAAGTAAACATTTCCTaGTTGCAGTTTTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKQVNIS*LQFSMC
Trigger: ACACATGGAAAACTGCAAGCAGGAAATGTTTACTTG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKRFSSS*CRCFIF
Trigger: GAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCAAATGAAAATGCAGAGTaGATATACCATGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSNENAE*IYHVLN
Trigger: GTTAAGGACATGGTATATGCACTCTGCATTTTCATT...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCAATGAAAATGCAGAGTaGATATACCATGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFNENAE*IYHVLN
Trigger: GTTAAGGACATGGTATATGCACTCTGCATTTTCATT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR GCA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATAATGAAAATGCAGAGTaGATATACCATGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHNENAE*IYHVLN
Trigger: GTTAAGGACATGGTATATGCACTCTGCATTTTCATT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAGCCTTCGACCTATATaGTTTTCCACAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKSLRPI*FSTVVT
Trigger: TGTCACCACTGTGGAAAACCATATAGGTCGAAGGCT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCGCTTTTCAAAGCTTTTaGTTGTTGTTGGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFAFQSF*LLLGLQ
Trigger: TTGTAAACCCAACAACAACCAAAAGCTTTGAAAAGC...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCAATATTTACGCAAAATaGGGAAGAGAATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: HKLDDGAATKSMELPRTFNIYAK*GRESRN
Trigger: GTTTCTGGATTCTCTTCCCCATTTTGCGTAAATATT...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTTATTATGATTTGCCATaGCATGATACTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFYYDLP*HDTSSL
Trigger: CAGGGATGAAGTATCATGTCATGGCAAATCATAATA...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR TCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKFLPRL*LVFGGF
Trigger: AAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCAGCTACTAAATCAATaGAGCTTCCAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFQLLNQ*SFQEHS
Trigger: AGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACTAGTCACTGCTACTTaGTACAAAGCATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKLVTAT*YKAFPS
Trigger: ACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGGCGTCAAAGAACACTaGAAACATCTTTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKGVKEH*KHLSES
Trigger: ACTCTCAGAAAGATGTTTCCAGTGTTCTTTGACGCC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATTTTCGGAAAGATGCTaGAAAATCACTCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKFSERC*KITHWF
Trigger: GAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAACTATTATCCTTTATaGAGCACTGGGTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKNYYPL*STGSCS
Trigger: AGAACAGGACCCAGTGCTCCATAAAGGATAATAGTT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
CDS-3UTR GCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACAAGTAAACATTTCCTaGTTGCAGTTTTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKQVNIS*LQFSMC
Trigger: ACACATGGAAAACTGCAAGCAGGAAATGTTTACTTG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACAAAACTACCTATTCTaGCAGTATCCAATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKQNYLF*QYPIQV
Trigger: AACCTGAATTGGATACTGCCAGAATAGGTAGTTTTG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAGCTTTTCAAAGCTTTTaGTTGTTGTTGGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKAFQSF*LLLGLQ
Trigger: TTGTAAACCCAACAACAACCAAAAGCTTTGAAAAGC...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CCA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAATTTATGATTAGTCTTTaGGGGCTTTACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKFMISL*GLYFLE
Trigger: TTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAA...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS GCA 90 bp GAGCACTGGGTCCTGTTCTTAGCTCCCACGATCCTCGTGCTCCTCTaGTGCTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACAGCACCG +
Preference number: 5 (lower is better)
Translates to: EHWVLFLAPTILVLL*CLKVVGPEVAGTAP
Trigger: CGGTGCTGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAACAGGACCCAGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
CDS GCA 90 bp CACTGGGTCCTGCTATTCTTAGCTCCCACGATCCTCGTGCTCCTCTaGTGCTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACAGCACCG +
Preference number: 5 (lower is better)
Translates to: HWVLLFLAPTILVLL*CLKVVGPEVAGTAP
Trigger: CGGTGCTGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAATAGCAGGACCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355467.6
CDS GCA 90 bp ACTCTAAGACTCAGCTCTGTCTCGGGAAGCTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTTCTGCTCCTGTGCTGCTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: TLRLSSVSGSSMPGC*RLLRDLLLLCCCLR
Trigger: GCGGAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTGAGTCTTAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS GCA 90 bp CACTGGGTCCTGTTCTTAGCTCCCACGATCCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACAGCACCGAGT +
Preference number: 5 (lower is better)
Translates to: HWVLFLAPTILVLLC*LKVVGPEVAGTAPS
Trigger: ACTCGGTGCTGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAACAGGACCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
CDS GCA 90 bp TGGGTCCTGCTATTCTTAGCTCCCACGATCCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACAGCACCGAGT +
Preference number: 5 (lower is better)
Translates to: WVLLFLAPTILVLLC*LKVVGPEVAGTAPS
Trigger: ACTCGGTGCTGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAATAGCAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355467.6
CDS GCA 90 bp CCTACTCTAAGACTCAGCTCTGTCTCGGGAAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGACCTTCTGCTCCTGTGCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PTLRLSSVSGSSMPG*CRLLRDLLLLCCCL
Trigger: GAGGCAGCAGCACAGGAGCAGAAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTGAGTCTTAGAGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS CCA 90 bp CATCAGGTACCAGGTCCTGAAGCACCTTCCTCTTGGGCCATTCCTTaGCCAGTTCAGCAGAGGCCAGCTCCTGTAGGTGGTATACAGCTA +
Preference number: 5 (lower is better)
Translates to: HQVPGPEAPSSWAIP*PVQQRPAPVGGIQL
Trigger: TAGCTGTATACCACCTACAGGAGCTGGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGAGGAAGGTGCTTCAGGACCTGGTACCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: PSTGPRDNSITSAFLGALLGPHS*TLGSSP
Trigger: AGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CCA 90 bp CCAGTTCAGCAGAGGCCAGCTCCTGTAGGTGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTCGGCCCCCACTCTTTGACTCTAGGT +
Preference number: 5 (lower is better)
Translates to: PVQQRPAPVGGIQLS*QNVSELGPHSLTLG
Trigger: ACCTAGAGTCAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACCACCTACAGGAGCTGGCCTCTGCTGAACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTAGCTCTGCAGCCCCTTaGCCACATTTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: PSTGPRDNSITSAFLGALSSAAP*PHFLTW
Trigger: CCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCT...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLELGPHS*TLGSSP
Trigger: AGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAACGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLERAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS GCA 90 bp GTCTTTGGGGGCTTTACTTTCTGGAACTGTGCTGGCACTGGCTCCTaGTCTGGTTCCTTACAGGAGGCTGACACTACCAGTTCCTCATTA +
Preference number: 5 (lower is better)
Translates to: VFGGFTFWNCAGTGS*SGSLQEADTTSSSL
Trigger: TAATGAGGAACTGGTAGTGTCAGCCTCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTAAAGCCCCCAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCTGAGTTTTAGGCCGTaGCTTCCTCCCATAAAGCTT +
Preference number: 5 (lower is better)
Translates to: PSTGPRDNSITSAFLGALLSFRP*LPPIKL
Trigger: AAGCTTTATGGGAGGAAGCAACGGCCTAAAACTCAG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTCCGCTTTTCTTCTTCTaGCTGCCGCTGCTTTATCTT +
Preference number: 5 (lower is better)
Translates to: PSTGPRDNSITSAFLGALPLFFF*LPLLYL
Trigger: AAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGG...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCAGCACAGGTCCCCGTGACAACAGCATCACATCTGCTTTCCTAGGAGCACTTGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PSTGPRDNSITSAFLGALGFSAP*FESGLH
Trigger: GTGAAGACCACTTTCAAACAAGGGAGCACTGAAACC...AAGTGCTCCTAGGAAAGCAGATGTGATGCTGTTGTCACGGGGACCTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp GCCAGCTCCTGTAGGTGGTATACAGCTATCTTGGCAGAACGTCTCTaGACTCGGCCCCCACTCTTTGACTCTAGGTTCATCTCCTTTAAG +
Preference number: 5 (lower is better)
Translates to: ASSCRWYTAILAERL*TRPPLFDSRFISFK
Trigger: CTTAAAGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACCACCTACAGGAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCCTTTCCCTCTCACTaGGCTCATCTATTTCATCTC +
Preference number: 5 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGAFPSH*AHLFHL
Trigger: GAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGGC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCCTCTTGGGCCATTCCTaGGCCAGTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFLLGHS*ASSAEA
Trigger: GGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGAG...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCTCTTGGGCCATTCCTaGGCCAGTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQLLGHS*ASSAEA
Trigger: GGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGAG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGCCGCTTTTCTTCTTCTaGCTGCCGCTGCTTTATCTT +
Preference number: 5 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRPLFFF*LPLLYL
Trigger: AAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGG...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CCCCATACAGTGTCAAGGAGTCATGCAGCAGGTCGGCGTCAAAGAACACTGGAAGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PHTVSRSHAAGRRQRTLEGFSAP*FESGLH
Trigger: GTGAAGACCACTTTCAAACAAGGGAGCACTGAAACC...TTCCAGTGTTCTTTGACGCCGACCTGCTGCATGACTCCTTGACACTGTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp CCTGACTCTGGAAAGAAGGATATAGGCCCATGCTCTGACCTCAGGTaGTATGCAAGTCCAGCCTTCGACCTATATGGTTTTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: PDSGKKDIGPCSDLR*YASPAFDLYGFPQW
Trigger: CCACTGTGGAAAACCATATAGGTCGAAGGCTGGACTTGCATATCACCTGAGGTCAGAGCATGGGCCTATATCCTTCTTTCCAGAGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp CCTGGACGAGTATATTTTAACTTTCGATCATCAGGTACCAGGTCCTaGAGCACCTTCCTCTTGGGCCATTCCTTGGCCAGTTCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: PGRVYFNFRSSGTRS*STFLLGHSLASSAE
Trigger: CTCTGCTGAACTGGCCAAGGAATGGCCCAAGAGGAAGGTGCTTCAGGACCTGGTACCTGATGATCGAAAGTTAAAATATACTCGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCTGAGTTTTAGGCCGTaGCTTCCTCCCATAAAGCTT +
Preference number: 5 (lower is better)
Translates to: NAHLGFPLVALPGALGDCLSFRP*LPPIKL
Trigger: AAGCTTTATGGGAGGAAGCAACGGCCTAAAACTCAG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCTCTTGGGCCATTCCTaGGCCAGTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: HKLDDGAATKSMELPRTFLLGHS*ASSAEA
Trigger: GGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGAG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCCGCTTTTCTTCTTCTaGCTGCCGCTGCTTTATCTT +
Preference number: 5 (lower is better)
Translates to: NAHLGFPLVALPGALGDCPLFFF*LPLLYL
Trigger: AAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CCA 90 bp TCCATGTGTTTCTTTAAACCCTCTATGGTCTTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACACTGCCTTTATCAACGATTTCTAAG +
Preference number: 5 (lower is better)
Translates to: SMCFFKPSMVFLPTA*QVGQETLPLSTISK
Trigger: CTTAGAAATCGTTGATAAAGGCAGTGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAAGACCATAGAGGGTTTAAAGAAACACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGAGCTCTGCAGCCCCTTaGCCACATTTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRSSAAP*PHFLTW
Trigger: CCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGCTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQLGPHS*TLGSSP
Trigger: AGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAG...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTCTTGGGCCATTCCTaGGCCAGTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLLGHS*ASSAEA
Trigger: GGCCTCTGCTGAACTGGCCAAGGAATGGCCCAAGAG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGAGCTTTTGGTTGTTGTaGGGTTTACAACGAACCAGT +
Preference number: 5 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRSFWLL*GLQRTS
Trigger: ACTGGTTCGTTGTAAACCCAACAACAACCAAAAGCT...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGCAAAGCTTTTGGTTGTaGTTGGGTTTACAACGAACC +
Preference number: 5 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRQSFWL*LGLQRT
Trigger: GGTTCGTTGTAAACCCAACAACAACCAAAAGCTTTG...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTTCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: NAHLGFPLVALPGALGDCSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGCGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRRAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AGTCCAGGGAGAAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGTAAACATTTCCTGCTaGCAGTTTTCCATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: SPGRRNAHLGFPLVALPGVNISC*QFSMCF
Trigger: GAAACACATGGAAAACTGCAAGCAGGAAATGTTTAC...TCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTTCTCCCTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGAGCTCTGCAGCCCCTTaGCCACATTTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQSSAAP*PHFLTW
Trigger: CCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCT...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CACAAGCTAGATGATGGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCCTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: HKLDDGAATKSMELPRTFLGPHS*TLGSSP
Trigger: AGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAG...GAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCCATCATCTAGCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTCAAAGCTTTTGGTTGTaGTTGGGTTTACAACGAACC +
Preference number: 5 (lower is better)
Translates to: NAHLGFPLVALPGALGDCQSFWL*LGLQRT
Trigger: GGTTCGTTGTAAACCCAACAACAACCAAAAGCTTTG...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGAACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGACTGTTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: NAHLGFPLVALPGALGDCSVLPC*KVVFTK
Trigger: TTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGA...ACAGTCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGCTGAGTTTTAGGCCGTaGCTTCCTCCCATAAAGCTT +
Preference number: 5 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLLSFRP*LPPIKL
Trigger: AAGCTTTATGGGAGGAAGCAACGGCCTAAAACTCAG...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGGCCTTTCCCTCTCACTaGGCTCATCTATTTCATCTC +
Preference number: 5 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLAFPSH*AHLFHL
Trigger: GAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGGC...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKLGPHS*TLGSSP
Trigger: AGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAG...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ATAAGCTTCAGAGGGCAAGTGATCATAGCTATGGATGAGGCCTCGGGCTCCAGGTTTCAAAGCTTTTGGTaGTTGTTGGGTTTACAACGA +
Preference number: 5 (lower is better)
Translates to: ISFRGQVIIAMDEASGSRFQSFW*LLGLQR
Trigger: TCGTTGTAAACCCAACAACAACCAAAAGCTTTGAAA...CCTGGAGCCCGAGGCCTCATCCATAGCTATGATCACTTGCCCTCTGAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATCGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHRAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRGFSAP*FESGLH
Trigger: GTGAAGACCACTTTCAAACAAGGGAGCACTGAAACC...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp CCTAGGAGCACTTTTACACTGACTGCCTATTTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTTACTTTCTGGAACTGTGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: PRSTFTLTAYFLPRL*LVFGGFTFWNCAGT
Trigger: AGTGCCAGCACAGTTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGTGCTCCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGCCTTTCCCTCTCACTaGGCTCATCTATTTCATCTC +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFAFPSH*AHLFHL
Trigger: GAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGGC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGAGCTCTGCAGCCCCTTaGCCACATTTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKSSAAP*PHFLTW
Trigger: CCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCT...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp AAGGAATGCGCACCTTGGTTTTCCCTTAGTGGCACTACCAGGAGCACTAGGAGATTTCAAAGCTTTTGGTaGTTGTTGGGTTTACAACGA +
Preference number: 5 (lower is better)
Translates to: KECAPWFSLSGTTRSTRRFQSFW*LLGLQR
Trigger: TCGTTGTAAACCCAACAACAACCAAAAGCTTTGAAA...TCTCCTAGTGCTCCTGGTAGTGCCACTAAGGGAAAACCAAGGTGCGCATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCGGTTTCAGTGCTCCCTaGTTTGAAAGTGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFGFSAP*FESGLH
Trigger: GTGAAGACCACTTTCAAACAAGGGAGCACTGAAACC...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp GGTTCACACGAAGATGCAGACGATGAACCACTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAACTATTATCCTTTATGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: GSHEDADDEPLKESS*GIVYWKLLSFMEHW
Trigger: CCAGTGCTCCATAAAGGATAATAGTTTCCAGTACACTATCCCTCATGATGACTCCTTAAGTGGTTCATCGTCTGCATCTTCGTGTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000461705.1
ENST00000494548.1
ENST00000556601.5
CDS-3UTR CAA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATAGAGGTTTCTTAGTTTaGTACAGGGCAAGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHRGFLV*YRARGA
Trigger: GGCTCCTCTTGCCCTGTACAAAACTAAGAAACCTCT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGATCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGTCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGACTTTACTCCTAAGGTaGCTTTTCATGTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRTLLLR*LFMSVG
Trigger: ACCCACAGACATGAAAAGCAACCTTAGGAGTAAAGT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTCGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFRAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRSVLPC*KVVFTK
Trigger: TTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGA...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAGCTTTTGGTTGTTGTaGGGTTTACAACGAACCAGT +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFSFWLL*GLQRTS
Trigger: ACTGGTTCGTTGTAAACCCAACAACAACCAAAAGCT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAGCTTTTGGTTGTTGTaGGGTTTACAACGAACCAGT +
Preference number: 5 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGSFWLL*GLQRTS
Trigger: ACTGGTTCGTTGTAAACCCAACAACAACCAAAAGCT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGAGCAGCTACTAAATCAATGGAGCTTCCAAGAACATTCTATACCCCAGGAAGGAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GAATKSMELPRTFYTPGRNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...CCTTCCTGGGGTATAGAATGTTCTTGGAAGCTCCATTGATTTAGTAGCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GGCTCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GSRKVGAVFIAASTFSFLNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...CAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGTCTAGTCACTGCTACTaGGTACAAAGCATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVSSHCY*VQSISQ
Trigger: CTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGA...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFSVLPC*KVVFTK
Trigger: TTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGTCAGTGCTCCCTTGTTaGAAAGTGGTCTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQSVLPC*KVVFTK
Trigger: TTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGA...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGCTATTTGCCTTTCCCTCTCACTaGGCTCATCTATTTCATCTC +
Preference number: 5 (lower is better)
Translates to: VLPCLKVVFTKAHILKLFAFPSH*AHLFHL
Trigger: GAGATGAAATAGATGAGCCAAGTGAGAGGGAAAGGC...AAATAGCTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAAAGCTCTGCAGCCCCTTaGCCACATTTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKSSAAP*PHFLTW
Trigger: CCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCT...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TGTGGGTCTAGTCACTGCTACTTGGTACAAAGCATTTCCCAGTATAAACAGCATAGCTTTTGGTTGTTGTaGGGTTTACAACGAACCAGT +
Preference number: 5 (lower is better)
Translates to: CGSSHCYLVQSISQYKQHSFWLL*GLQRTS
Trigger: ACTGGTTCGTTGTAAACCCAACAACAACCAAAAGCT...ATGCTGTTTATACTGGGAAATGCTTTGTACCAAGTAGCAGTGACTAGACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TCCAGGAAAGTTGGGGCAGTATTTATTGCTGCTTCTACTTTCTCTTTCCTGTCACAAAGCTTTTGGTTGTaGTTGGGTTTACAACGAACC +
Preference number: 5 (lower is better)
Translates to: SRKVGAVFIAASTFSFLSQSFWL*LGLQRT
Trigger: GGTTCGTTGTAAACCCAACAACAACCAAAAGCTTTG...TGACAGGAAAGAGAAAGTAGAAGCAGCAATAAATACTGCCCCAACTTTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TACCTATTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGCAAAGCTTTTGGTTGTaGTTGGGTTTACAACGAACC +
Preference number: 5 (lower is better)
Translates to: YLFWQYPIQVSVLPCLKVQSFWL*LGLQRT
Trigger: GGTTCGTTGTAAACCCAACAACAACCAAAAGCTTTG...CACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp CAGGAAGGAAAGGACAACCAAAGAGGTTTCTTAGTTTTGTACAGGGCAAGAGGAAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QEGKDNQRGFLVLYRARGNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...TCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTGTCCTTTCCTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCAATCTTAAAACCATATaGAGAGGACAAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFNLKTI*RGQTAS
Trigger: GGAGGCTGTTTGTCCTCTCAATATGGTTTTAAGATT...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACGGGCTCCAGGAAAGTaGGGGCAGTATTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKRAPGK*GQYLLL
Trigger: CAGCAATAAATACTGCCCCAACTTTCCTGGAGCCCG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp CTAGTGCAATTCTGTTCCAATCACCCACCCTACTTCAACACAACCTaGAAGTCTCCTACTTTTTCTCAGGTAATATGCCACATCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LVQFCSNHPPYFNTT*KSPTFSQVICHIFL
Trigger: TAGAAAGATGTGGCATATTACCTGAGAAAAAGTAGGAGACTTTCAGGTTGTGTTGAAGTAGGGTGGGTGATTGGAACAGAATTGCACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488055.1
CDS-3UTR CAA 90 bp TTCTGGCAGTATCCAATTCAGGTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCTTTCAAAGCTTTTGGTaGTTGTTGGGTTTACAACGA +
Preference number: 5 (lower is better)
Translates to: FWQYPIQVSVLPCLKVVFFQSFW*LLGLQR
Trigger: TCGTTGTAAACCCAACAACAACCAAAAGCTTTGAAA...GAAGACCACTTTCAAACAAGGGAGCACTGAAACCTGAATTGGATACTGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTGAAATTTACACAGGAGGAAGGAGCTGAGAAAGTCACAGCCTTACACAAACAGTTTCAAAGCTTTTGGTaGTTGTTGGGTTTACAACGA +
Preference number: 5 (lower is better)
Translates to: VKFTQEEGAEKVTALHKQFQSFW*LLGLQR
Trigger: TCGTTGTAAACCCAACAACAACCAAAAGCTTTGAAA...CTGTTTGTGTAAGGCTGTGACTTTCTCAGCTCCTTCCTCCTGTGTAAATTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp GTTTCAGTGCTCCCTTGTTTGAAAGTGGTCTTCACAAAAGCCCACATTTTAAAGGTAAACATTTCCTGCTaGCAGTTTTCCATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: VSVLPCLKVVFTKAHILKVNISC*QFSMCF
Trigger: GAAACACATGGAAAACTGCAAGCAGGAAATGTTTAC...CTTTAAAATGTGGGCTTTTGTGAAGACCACTTTCAAACAAGGGAGCACTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS-3UTR CAA 90 bp ACTAGGAGACTGTCAAAACATCAGGGGCAATGTGATATTTCTCAATTCTTAAAACCGCTTTTCTTCTTCTaGCTGCCGCTGCTTTATCTT +
Preference number: 5 (lower is better)
Translates to: TRRLSKHQGQCDISQFLKPLFFF*LPLLYL
Trigger: AAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGG...TTTTAAGAATTGAGAAATATCACATTGCCCCTGATGTTTTGACAGTCTCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 90 bp CAAACTATTATGATTTGCCATGACATGATACTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACAATGATGACAAGTAAACATTTCCTG +
Preference number: 5 (lower is better)
Translates to: QTIMICHDMILHPCQ*TKLFPTMMTSKHFL
Trigger: CAGGAAATGTTTACTTGTCATCATTGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAGTATCATGTCATGGCAAATCATAATAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS GCA 72 bp CTCAGCTCTGTCTCGGGAAGCTCAATGCCAGGCTGCTaGCGCCTTCTTAGAGACCTTCTGCTCCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LSSVSGSSMPGC*RLLRDLLLLCC
Trigger: GCAGCACAGGAGCAGAAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS GCA 72 bp AGACTCAGCTCTGTCTCGGGAAGCTCAATGCCAGGCTaGTGCCGCCTTCTTAGAGACCTTCTGCTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: RLSSVSGSSMPG*CRLLRDLLLLC
Trigger: GCACAGGAGCAGAAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS GCA 72 bp GTCCTGTTCTTAGCTCCCACGATCCTCGTGCTCCTCTaGTGCTTAAAGGTTGTGGGTCCCGAAGTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: VLFLAPTILVLL*CLKVVGPEVAG
Trigger: ACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAACAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
CDS GCA 72 bp CTGCTATTCTTAGCTCCCACGATCCTCGTGCTCCTCTaGTGCTTAAAGGTTGTGGGTCCCGAAGTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: LLFLAPTILVLL*CLKVVGPEVAG
Trigger: ACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAATAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355467.6
CDS GCA 72 bp CTGTTCTTAGCTCCCACGATCCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACA +
Preference number: 6 (lower is better)
Translates to: LFLAPTILVLLC*LKVVGPEVAGT
Trigger: TGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379717.5
ENST00000416005.6
CDS GCA 72 bp CTATTCTTAGCTCCCACGATCCTCGTGCTCCTCTGCTaGTTAAAGGTTGTGGGTCCCGAAGTGGCGGGTACA +
Preference number: 6 (lower is better)
Translates to: LFLAPTILVLLC*LKVVGPEVAGT
Trigger: TGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355467.6
CDS CCA 72 bp CAGAGGCCAGCTCCTGTAGGTGGTATACAGCTATCTTaGCAGAACGTCTCTGAACTCGGCCCCCACTCTTTG +
Preference number: 6 (lower is better)
Translates to: QRPAPVGGIQLS*QNVSELGPHSL
Trigger: CAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACCACCTACAGGAGCTGGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CCA 72 bp TTCTTTAAACCCTCTATGGTCTTCCTCCCCACTGCCTaGCAGGTAGGGCAGGAGACACTGCCTTTATCAACG +
Preference number: 6 (lower is better)
Translates to: FFKPSMVFLPTA*QVGQETLPLST
Trigger: CGTTGATAAAGGCAGTGTCTCCTGCCCTACCTGCCAGGCAGTGGGGAGGAAGACCATAGAGGGTTTAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CAA 72 bp TCTTGGCAGAACGTCTCTGAACTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCTTTAAGCACTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SWQNVSELGPHS*TLGSSPLSTLA
Trigger: AGCCAGAGTGCTTAAAGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CAA 90 bp ATACAGCTATCTTGGCAGAACGTCTCTGAACTCGGCCCCCACTCTTaGACTCTAGGTTCATCTCCTTTAAGCACTCTGGCTGTCCTGACT +
Preference number: 6 (lower is better)
Translates to: IQLSWQNVSELGPHS*TLGSSPLSTLAVLT
Trigger: AGTCAGGACAGCCAGAGTGCTTAAAGGAGATGAACCTAGAGTCAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 72 bp TGTAGGTGGTATACAGCTATCTTGGCAGAACGTCTCTaGACTCGGCCCCCACTCTTTGACTCTAGGTTCATC +
Preference number: 6 (lower is better)
Translates to: CRWYTAILAERL*TRPPLFDSRFI
Trigger: GATGAACCTAGAGTCAAAGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACCACCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 72 bp CAAATCACAAGCACACGAGTGAGTGCTAGGGACCTCTaGACCTCGACCACAAAAAGACGAATTCCCCTATGC +
Preference number: 6 (lower is better)
Translates to: QITSTRVSARDL*TSTTKRRIPLC
Trigger: GCATAGGGGAATTCGTCTTTTTGTGGTCGAGGTTCAGAGGTCCCTAGCACTCACTCGTGTGCTTGTGATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461705.1
CDS GCA 72 bp CTGCTCCTGTGCTGCTGCCTCCGCTTTTCTTCTTCTTaGTGCCGCTGCTTTATCTTCATCAGCTTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: LLLCCCLRFSSS*CRCFIFISFSK
Trigger: CTTTGAAAAGCTGATGAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS GCA 72 bp ATGATTAGTCTTTGGGGGCTTTACTTTCTGGAACTGTaGTGGCACTGGCTCCTGCTCTGGTTCCTTACAGGA +
Preference number: 6 (lower is better)
Translates to: MISLWGLYFLEL*WHWLLLWFLTG
Trigger: TCCTGTAAGGAACCAGAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTAAAGCCCCCAAAGACTAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS CCA 72 bp ATAGTGTACTGGAAACTATTATCCTTTATGGAGCACTaGGTCCTGCTAGGCGGGTACAGCACCGAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: IVYWKLLSFMEH*VLLGGYSTESG
Trigger: TCCAGACTCGGTGCTGTACCCGCCTAGCAGGACCCAGTGCTCCATAAAGGATAATAGTTTCCAGTACACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494548.1
ENST00000556601.5
CDS GCA 72 bp CTCCTGTGCTGCTGCCTCCGCTTTTCTTCTTCTTGCTaGCGCTGCTTTATCTTCATCAGCTTTTCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: LLCCCLRFSSSC*RCFIFISFSKL
Trigger: AAGCTTTGAAAAGCTGATGAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGGAGGCAGCAGCACAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5
CDS CCA 72 bp CCTCAGGTGATATGCAAGTCCAGCCTTCGACCTATATaGTTTTCCACAGTGGTGACATTTCAGGGTCATCTT +
Preference number: 6 (lower is better)
Translates to: PQVICKSSLRPI*FSTVVTFQGHL
Trigger: AAGATGACCCTGAAATGTCACCACTGTGGAAAACCATATAGGTCGAAGGCTGGACTTGCATATCACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS CCA 72 bp ATAGTGTACTGGAAACTATTATCCTTTATGGAGCACTaGGTCCTGCTATTCTTAGCTCCCACGATCCTCGTG +
Preference number: 6 (lower is better)
Translates to: IVYWKLLSFMEH*VLLFLAPTILV
Trigger: CACGAGGATCGTGGGAGCTAAGAATAGCAGGACCCAGTGCTCCATAAAGGATAATAGTTTCCAGTACACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355467.6
ENST00000413371.6
ENST00000461705.1
CDS TCA 72 bp TTCACCAGAGGCACCAATGTACAATTCTTCCCACTATaGTCTACTGTCGCAAAAAGTGCCTTCAAAATCCAG +
Preference number: 6 (lower is better)
Translates to: FTRGTNVQFFPL*STVAKSAFKIQ
Trigger: CTGGATTTTGAAGGCACTTTTTGCGACAGTAGATCATAGTGGGAAGAATTGTACATTGGTGCCTCTGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488055.1
CDS GCA 72 bp TCTCATCTTCATCCAGTAGGTAGATTTTCGGAAAGATaGTGGAAAATCACTCACTGGTTCACACGAAGATGC +
Preference number: 6 (lower is better)
Translates to: SHLHPVGRFSER*WKITHWFTRRC
Trigger: GCATCTTCGTGTGAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCTACCTACTGGATGAAGATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000494548.1
ENST00000556601.5
CDS CCA 72 bp CATCTTCATCCAGTAGGTAGATTTTCGGAAAGATGCTaGAAAATCACTCACTGGTTCACACGAAGATGCAGA +
Preference number: 6 (lower is better)
Translates to: HLHPVGRFSERC*KITHWFTRRCR
Trigger: TCTGCATCTTCGTGTGAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCTACCTACTGGATGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000494548.1
ENST00000556601.5
CDS CCA 72 bp TTCTTGATATCTGTCTTCCATTTATGTAGTACTTCCTaGCTGAAGGTAGGGAGCCCTGGACGAGTATATTTT +
Preference number: 6 (lower is better)
Translates to: FLISVFHLCSTS*LKVGSPGRVYF
Trigger: AAAATATACTCGTCCAGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAAATGGAAGACAGATATCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 72 bp GAAGATGCAGACGATGAACCACTTAAGGAGTCATCATaGGGGATAGTGTACTGGAAACTATTATCCTTTATG +
Preference number: 6 (lower is better)
Translates to: EDADDEPLKESS*GIVYWKLLSFM
Trigger: CATAAAGGATAATAGTTTCCAGTACACTATCCCTCATGATGACTCCTTAAGTGGTTCATCGTCTGCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000461705.1
ENST00000494548.1
ENST00000556601.5
CDS TCA 72 bp ATGATTTGCCATGACATGATACTTCATCCCTGCCAGTaGACGAAGTTGTTTCCCACAATGATGACAAGTAAA +
Preference number: 6 (lower is better)
Translates to: MICHDMILHPCQ*TKLFPTMMTSK
Trigger: TTTACTTGTCATCATTGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAGTATCATGTCATGGCAAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000556601.5
CDS TCA 72 bp ACTTTTACACTGACTGCCTATTTCCTTCCTCGTTTATaGTTAGTCTTTGGGGGCTTTACTTTCTGGAACTGT +
Preference number: 6 (lower is better)
Translates to: TFTLTAYFLPRL*LVFGGFTFWNC
Trigger: ACAGTTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAACGAGGAAGGAAATAGGCAGTCAGTGTAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355467.6
ENST00000379717.5
ENST00000413371.6
ENST00000416005.6
ENST00000488055.1
ENST00000556601.5