RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF510 (Homo sapiens)

Ensembl gene IDs: ENSG00000081386

Ensembl transcript IDs: ENST00000223428.9, ENST00000374641.3, ENST00000375231.5

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGAAAGGTATCCTGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTaGAGCCTGAGTCCCCAGTCATGGGGCTTTGCCACCTGGCCTCCC +
Preference number: 1 (lower is better)
Translates to: MERYPVGRPLLRDSR*SLSPQSWGFATWPP
Trigger: GGGAGGCCAGGTGGCAAAGCCCCATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACAGGATACCTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CCA 90 bp AATCTGAGTCCCTCCCCTCTCTGGAGGTTTCCCATAATACTTGGGTaGGTGCCAATGGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAG +
Preference number: 1 (lower is better)
Translates to: NLSPSPLWRFPIILG*VPMAFGARENSLKQ
Trigger: CTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACTCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 90 bp TATAAATCTGAGTCCCTCCCCTCTCTGGAGGTTTCCCATAATACTTaGGTGGGTGCCAATGGCCTTTGGAGCCAGGGAAAACTCCTTAAA +
Preference number: 1 (lower is better)
Translates to: YKSESLPSLEVSHNT*VGANGLWSQGKLLK
Trigger: TTTAAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACTCAGATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 90 bp TCTCTGGAGGTTTCCCATAATACTTGGGTGGGTGCCAATGGCCTTTaGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATAT +
Preference number: 1 (lower is better)
Translates to: SLEVSHNTWVGANGL*SQGKLLKADIAGVY
Trigger: ATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAACCTCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 90 bp CCTGCCTTGTTTTCTATCTTTATTAGCTTGAAGGCCCTTAGTGGGTaGGCAGACAGAAAATCAGCTCCTCCAGAGTCTCTAGATGAGGCA +
Preference number: 1 (lower is better)
Translates to: PALFSIFISLKALSG*ADRKSAPPESLDEA
Trigger: TGCCTCATCTAGAGACTCTGGAGGAGCTGATTTTCTGTCTGCCCACCCACTAAGGGCCTTCAAGCTAATAAAGATAGAAAACAAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR TCA 90 bp GAACACACACAGGATCCTAGTAGTTTCAGTTGGCGAAAGCATCAGTaGGCCAGGCCCAATTACAGTAACCTCTATGAATTGAGGGCTCTA +
Preference number: 1 (lower is better)
Translates to: EHTQDPSSFSWRKHQ*ARPNYSNLYELRAL
Trigger: TAGAGCCCTCAATTCATAGAGGTTACTGTAATTGGGCCTGGCTCACTGATGCTTTCGCCAACTGAAACTACTAGGATCCTGTGTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 90 bp ACCTCTGTGCAATTAAGGCACACTTACGTTGAACTGCACAGTGGCTaGTCACCATTCAGCCAAAAGACTTTTAGGTTCATGCAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: TSVQLRHTYVELHSG*SPFSQKTFRFMQSP
Trigger: AGGGCTTTGCATGAACCTAAAAGTCTTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTTAATTGCACAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 90 bp ACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTaGAGTAAAATGAAATTGGTGCTGGTGAAGAGATTACCAGCCTGT +
Preference number: 1 (lower is better)
Translates to: TNLDEKEIGKSGLCA*SKMKLVLVKRLPAC
Trigger: ACAGGCTGGTAATCTCTTCACCAGCACCAATTTCATTTTACTCCAGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 90 bp GAGGGCTCTACTAAGCCAGCAACTTTGCTTCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTA +
Preference number: 1 (lower is better)
Translates to: EGSTKPATLLRSGKR*YIISLLRDSYYYCL
Trigger: TAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAGTAGAGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 90 bp AAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTaGCAGGGCCCTGGTAATTTATTAGGGAAGTCTCTTATGTTTCAG +
Preference number: 1 (lower is better)
Translates to: KHGTKLVLEMISILL*QGPGNLLGKSLMFQ
Trigger: CTGAAACATAAGAGACTTCCCTAATAAATTACCAGGGCCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 90 bp CACATAATGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTaGGTGTATTCATTCAGGCACAGACTTCTTTATCTTGTACCATGC +
Preference number: 1 (lower is better)
Translates to: HIMFNWERHRRGEFC*VYSFRHRLLYLVPC
Trigger: GCATGGTACAAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 90 bp GCTCACATAATGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTaGTGCGTGTATTCATTCAGGCACAGACTTCTTTATCTTGTACCA +
Preference number: 1 (lower is better)
Translates to: AHIMFNWERHRRGEF*CVYSFRHRLLYLVP
Trigger: TGGTACAAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 90 bp ATGCTCAGATTTCAGTTTGATAACTGTACCTTCAGCAAGTATTTCTaGGTGCCTAATACGAAGAGGGACTGCTTCATGTGTTTGAGATAC +
Preference number: 1 (lower is better)
Translates to: MLRFQFDNCTFSKYF*VPNTKRDCFMCLRY
Trigger: GTATCTCAAACACATGAAGCAGTCCCTCTTCGTATTAGGCACTCAGAAATACTTGCTGAAGGTACAGTTATCAAACTGAAATCTGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR GCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCCCAGCTCCCAAGGGCTaGCCCCTTTTGCCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVPAPKG*PLLPEV
Trigger: AACTTCTGGCAAAAGGGGGCAGCCCTTGGGAGCTGG...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp TGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTGAAGCCTGAGTCCCCAGTCATGTCCACAAGTGAGGCTTaGTGGGTCCTTTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: CGPPSAKGQQVKPESPVMSTSEA*WVLFIL
Trigger: CAAAATGAAAAGGACCCAGCAAGCCTCACTTGTGGA...CATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGACCAAGTCAATCCCCTaGCCCCCAGCTCCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLTKSIP*PPAPKG
Trigger: GCCCTTGGGAGCTGGGGGCCAGGGGATTGACTTGGT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCAGGGCTGCCCCCTTTTaGCAGAAGTTTCAACCCACA +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVRAAPF*QKFQPT
Trigger: TGTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp TGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTGAAGCCTGAGTCCCCAGTCATGCTGAAGGTTGCATTTTaGACACAATTCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: CGPPSAKGQQVKPESPVMLKVAF*TQFFLH
Trigger: ATGCAGGAAGAATTGTGTCCAAAATGCAACCTTCAG...CATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGTATAGCTGGGGTATATaGAGGTGTCAGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLYSWGI*RCQEVW
Trigger: CCACACCTCCTGACACCTCCATATACCCCAGCTATA...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAAGGCACACTTACGTTaGACTGCACAGTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCKAHLR*TAQWLL
Trigger: GAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAGGGCTGCCCCCTTTTaGCAGAAGTTTCAACCCACA +
Preference number: 2 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCRAAPF*QKFQPT
Trigger: TGTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCAGTCCCTCCCCTCTCTaGAGGTTTCCCATAATACTT +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVSPSPL*RFPIIL
Trigger: AAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCAAAGACCAACCTGGATaGAAAGGAGATTGGGAAATC +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVKDQPG*KGDWEI
Trigger: GATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTATTGCCTATACAGCTaGCATACTGTGGGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLYCLYS*HTVGPG
Trigger: TCCTGGCCCCACAGTATGTCAGCTGTATAGGCAATA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCAGACTTTTAGGTTCATaGAAAGCCCTGTATCAGGTG +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVRLLGS*KALYQV
Trigger: CACCTGATACAGGGCTTTGCATGAACCTAAAAGTCT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCCATAATACTTGGGTaGGTGCCAATGGCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYPIILG*VPMAFG
Trigger: TCCAAAGGCCATTGGCACCCACCCAAGTATTATGGG...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CAA 90 bp CCTCGTGCTCTTTCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTaGTTAATGGCACTGAGTTTGAACACACACAGGATCCTAGTAGTT +
Preference number: 2 (lower is better)
Translates to: PRALSTERSDRFTLG*LMALSLNTHRILVV
Trigger: AACTACTAGGATCCTGTGTGTGTTCAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGAAAGAGCACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGTTCTTTGATACACTCTaGAGGTTGCATTTTGGACAC +
Preference number: 2 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLFFDTL*RLHFGH
Trigger: GTGTCCAAAATGCAACCTTCAGAGTGTATCAAAGAA...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCTTCCAAGTTGATGTTTaGAACCACGGGTATACTGAA +
Preference number: 2 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVFQVDV*NHGYTE
Trigger: TTCAGTATACCCGTGGTTTCAAACATCAACTTGGAA...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGAGAAGAGGAGAATTTTaGTGCGTGTATTCATTCAGG +
Preference number: 2 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLRRGEF*CVYSFR
Trigger: CCTGAATGAATACACGCAGCAAAATTCTCCTCTTCT...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACGTTTCCCATAATACTTaGGTGGGTGCCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYVSHNT*VGANGL
Trigger: AAGGCCATTGGCACCCACCCAAGTATTATGGGAAAC...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CAA 90 bp GAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTaGAACACACACAGGATCCTAGTAGTTTCAGTTGGCGAAAGCATC +
Preference number: 2 (lower is better)
Translates to: ERSDRFTLGLLMALS*NTHRILVVSVGESI
Trigger: GATGCTTTCGCCAACTGAAACTACTAGGATCCTGTGTGTGTTCAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCCTATCTAATAGGGTATaGCTTCATTCAGGCCTATCC +
Preference number: 2 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPLSNRV*LHSGLS
Trigger: GGATAGGCCTGAATGAAGTCATACCCTATTAGATAG...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR GCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTCCACAAGTGAGGCTTaGTGGGTCCTTTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLSTSEA*WVLFIL
Trigger: CAAAATGAAAAGGACCCAGCAAGCCTCACTTGTGGA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTAGTCCCTCCCCTCTCTaGAGGTTTCCCATAATACTT +
Preference number: 2 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLSPSPL*RFPIIL
Trigger: AAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACT...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGAAAGACCAACCTGGATaGAAAGGAGATTGGGAAATC +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLKDQPG*KGDWEI
Trigger: GATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACAGAGGAGAATTTTGCTaGGTGTATTCATTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYRGEFC*VYSFRH
Trigger: GTGCCTGAATGAATACACGCAGCAAAATTCTCCTCT...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAGAAGAGGAGAATTTTaGTGCGTGTATTCATTCAGG +
Preference number: 2 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCRRGEF*CVYSFR
Trigger: CCTGAATGAATACACGCAGCAAAATTCTCCTCTTCT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CAA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATaGCCTATACAGCTGACATACTGTGGGGCCAGGACAGGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLL*PIQLTYCGARTGAF
Trigger: GAAAGCACCTGTCCTGGCCCCACAGTATGTCAGCTGTATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTTCTCTGATTCACAGTaGGGGTTTACTTCTGGGACT +
Preference number: 2 (lower is better)
Translates to: KARHQACPRNDIHFVVTGFSDSQ*GFTSGT
Trigger: AGTCCCAGAAGTAAACCCTCACTGTGAATCAGAGAA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTCCAAGAATTCCAAGTTaGTGTTTGAAACCACGGGTA +
Preference number: 2 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLPRIPS*CLKPRV
Trigger: TACCCGTGGTTTCAAACATCAACTTGGAATTCTTGG...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGAAGGCACACTTACGTTaGACTGCACAGTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKKAHLR*TAQWLL
Trigger: GAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTT...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTA +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLRSGKR*YIISLL
Trigger: TAGAAGGGAAATAATGTATCACCTCTTTCCAGAACG...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTACAACATGCCAGAAATaGTCTTGCAATTTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCTTCQK*SCNFRP
Trigger: TGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATGAACTGCACAGTGGCTaGTCACCATTCAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNELHSG*SPFSQK
Trigger: CTTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTC...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCTGAAGGTTGCATTTTaGACACAATTCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYLKVAF*TQFFLH
Trigger: ATGCAGGAAGAATTGTGTCCAAAATGCAACCTTCAG...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAAGCCTGTGTGATGTGTaGGAGCTATCTAATAGGGTA +
Preference number: 2 (lower is better)
Translates to: HPSARVKDHELLRRSTRQSLCDV*ELSNRV
Trigger: TACCCTATTAGATAGCTCCCACACATCACACAGGCT...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCAGCCTGTGTGATGTGTaGGAGCTATCTAATAGGGTA +
Preference number: 2 (lower is better)
Translates to: LVPCHIKARHQACPRNDISLCDV*ELSNRV
Trigger: TACCCTATTAGATAGCTCCCACACATCACACAGGCT...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACTCTGGACTATGTGCCTaGAGTAAAATGAAATTGGTG +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYSGLCA*SKMKLV
Trigger: CACCAATTTCATTTTACTCCAGGCACATAGTCCAGA...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGCACATAATGTTCAACTaGGAAAGACACAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: STERSDRFTLGLLMALSLHIMFN*ERHRRG
Trigger: TCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTG...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAAGCCCTGTATCAGGTaGTACTATCAATTTCATTAC +
Preference number: 2 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCKPCIR*YYQFHY
Trigger: GTAATGAAATTGATAGTACCACCTGATACAGGGCTT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CAA 90 bp GAGAATTTTGCTGCGTGTATTCATTCAGGCACAGACTTCTTTATCTaGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: ENFAACIHSGTDFFI*YHATLKHGTKLVLE
Trigger: TTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGCAAAATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATATTGGGTGGGTGCCAATaGCCTTTGGAGCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPILGGCQ*PLEPGK
Trigger: TTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAA...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCCCATAATACTTGGGTaGGTGCCAATGGCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFPIILG*VPMAFG
Trigger: TCCAAAGGCCATTGGCACCCACCCAAGTATTATGGG...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCAACTTTGCTTCGTTCTaGAAAGAGGTGATACATTAT +
Preference number: 2 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPNFASF*KEVIHY
Trigger: ATAATGTATCACCTCTTTCCAGAACGAAGCAAAGTT...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTTGTGCCCTCTGATTaGCTTAAGCCTGGCTTACAC +
Preference number: 2 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFVPSD*LKPGLH
Trigger: GTGTAAGCCAGGCTTAAGTCAATCAGAGGGCACAAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTGCCAGAAATGCTCTTaGAATTTCAGGCCATTATTT +
Preference number: 2 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCCQKCS*NFRPLF
Trigger: AAATAATGGCCTGAAATTGCAAGAGCATTTCTGGCA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTACACTTACGTTGAACTaGACAGTGGCTGCTCACCAT +
Preference number: 2 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFTLTLN*TVAAHH
Trigger: ATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATCTAAGCCAGCAACTTTaGTTCGTTCTGGAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDLSQQL*FVLERG
Trigger: ACCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAG...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACGCATTCATCTTCATCTaGTTTCTTTCCTATGTGAAT +
Preference number: 2 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYAFIFI*FLSYVN
Trigger: ATTCACATAGGAAAGAAACCAGATGAAGATGAATGC...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGGTGCCAATGGCCTTTaGAGCCAGGGAAAACTCCTT +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIGANGL*SQGKLL
Trigger: AAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAGAAAGATGGGTATTATaGTTCCTATACATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: HPSARVKDHELLRRSTRQERWVL*FLYMPV
Trigger: GACTGGCATGTATAGGAACCATAATACCCATCTTTC...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CAA 90 bp TGCTCACATAATGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTaGCTGCGTGTATTCATTCAGGCACAGACTTCTTTATCTTGTACC +
Preference number: 2 (lower is better)
Translates to: CSHNVQLGKTQKRRI*LRVFIQAQTSLSCT
Trigger: GGTACAAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTCTCTGATTCACAGTaGGGGTTTACTTCTGGGACT +
Preference number: 2 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFSDSQ*GFTSGT
Trigger: AGTCCCAGAAGTAAACCCTCACTGTGAATCAGAGAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGAACTGCACAGTGGCTaGTCACCATTCAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIELHSG*SPFSQK
Trigger: CTTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCATCTGGACTATGTGCCTaGAGTAAAATGAAATTGGTG +
Preference number: 2 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPSGLCA*SKMKLV
Trigger: CACCAATTTCATTTTACTCCAGGCACATAGTCCAGA...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCCAAGAATTCCAAGTTaGTGTTTGAAACCACGGGTA +
Preference number: 2 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFPRIPS*CLKPRV
Trigger: TACCCGTGGTTTCAAACATCAACTTGGAATTCTTGG...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTA +
Preference number: 2 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDRSGKR*YIISLL
Trigger: TAGAAGGGAAATAATGTATCACCTCTTTCCAGAACG...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTCTTATGTTTCAGACTaGGATGTGATATACATCATG +
Preference number: 2 (lower is better)
Translates to: KARHQACPRNDIHFVVTGSYVSD*DVIYIM
Trigger: CATGATGTATATCACATCCCAGTCTGAAACATAAGA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTCTTTGATACACTCTaGAGGTTGCATTTTGGACAC +
Preference number: 2 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFFDTL*RLHFGH
Trigger: GTGTCCAAAATGCAACCTTCAGAGTGTATCAAAGAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATCTACTCAGAATCGGGTaGAGTTTAAAATGTAGGAAT +
Preference number: 2 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNLLRIG*SLKCRN
Trigger: ATTCCTACATTTTAAACTGCACCCGATTCTGAGTAG...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR GCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAACAACATGCCAGAAATaGTCTTGCAATTTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPITTCQK*SCNFRP
Trigger: TGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGT...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR GCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGCTTAACTACAAGGAATaGTCTCCAAGAATTCCAAGT +
Preference number: 2 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKLNYKE*SPRIPS
Trigger: ACTTGGAATTCTTGGAGAGCATTCCTTGTAGTTAAG...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATATTCCAAGTTGATGTTTaGAACCACGGGTATACTGAA +
Preference number: 2 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIFQVDV*NHGYTE
Trigger: TTCAGTATACCCGTGGTTTCAAACATCAACTTGGAA...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGATCTTATGTTTCAGACTaGGATGTGATATACATCATG +
Preference number: 2 (lower is better)
Translates to: CIHCGYARLRNDSITLMGSYVSD*DVIYIM
Trigger: CATGATGTATATCACATCCCAGTCTGAAACATAAGA...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTACACATAATGTTCAACTaGGAAAGACACAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLHIMFN*ERHRRG
Trigger: TCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTG...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR TCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAAAAACAAGGGTTACTTaGATACAAGCACTGTCATAC +
Preference number: 2 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLKTRVT*IQALSY
Trigger: GTATGACAGTGCTTGTATTCAAGTAACCCTTGTTTT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp TATCCTGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTaGAGCCTGAGTCCCCAGTCATGGGGCTTTGCCACC +
Preference number: 3 (lower is better)
Translates to: YPVGRPLLRDSR*SLSPQSWGFAT
Trigger: GGTGGCAAAGCCCCATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACAGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CCA 72 bp CCCTCCCCTCTCTGGAGGTTTCCCATAATACTTGGGTaGGTGCCAATGGCCTTTGGAGCCAGGGAAAACTCC +
Preference number: 3 (lower is better)
Translates to: PSPLWRFPIILG*VPMAFGARENS
Trigger: GGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAACCTCCAGAGAGGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp GAGTCCCTCCCCTCTCTGGAGGTTTCCCATAATACTTaGGTGGGTGCCAATGGCCTTTGGAGCCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: ESLPSLEVSHNT*VGANGLWSQGK
Trigger: TTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 72 bp GACATACTGTGGGGCCAGGACAGGTGCTTTCCTGAATaGCCCATTTTCATTCCACAAGTGAGGCTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: DILWGQDRCFPE*PIFIPQVRLAG
Trigger: CCCAGCAAGCCTCACTTGTGGAATGAAAATGGGGCATTCAGGAAAGCACCTGTCCTGGCCCCACAGTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp GGGCAGTACCTCTGTGCAATTAAGGCACACTTACGTTaGACTGCACAGTGGCTGCTCACCATTCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: GQYLCAIKAHLR*TAQWLLTIQPK
Trigger: TTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTTAATTGCACAGAGGTACTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp TACATGACTAGAGCACAGACCATGGTCTCCAGTTGGTaGTGTATTGTATGGAAAGGTATCCTGTGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: YMTRAQTMVSSW*CIVWKGILWAA
Trigger: GGCGGCCCACAGGATACCTTTCCATACAATACATCACCAACTGGAGACCATGGTCTGTGCTCTAGTCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CCA 72 bp AGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTaGGGGCAGTACCTCTGTGCAATTAAGGCACACTTA +
Preference number: 3 (lower is better)
Translates to: RYSWGIWRCQEV*GQYLCAIKAHL
Trigger: TAAGTGTGCCTTAATTGCACAGAGGTACTGCCCCCACACCTCCTGACACCTCCATATACCCCAGCTATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTaGACCTGGTACCCTTGTCAGGGAACCAAGTCAATC +
Preference number: 3 (lower is better)
Translates to: PKSKLTAAFQKG*TWYPCQGTKSI
Trigger: GATTGACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTCCAAGAATTCCAAGTaGATGTTTGAAACCACGGGT +
Preference number: 3 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCSKNSK*MFETTG
Trigger: ACCCGTGGTTTCAAACATCAACTTGGAATTCTTGGA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp GTTTCCCATAATACTTGGGTGGGTGCCAATGGCCTTTaGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCT +
Preference number: 3 (lower is better)
Translates to: VSHNTWVGANGL*SQGKLLKADIA
Trigger: AGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAAGTATTATGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTAAGGGCTGCCCCCTTTaGCCAGAAGTTTCAACCCAC +
Preference number: 3 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFKGCPL*PEVSTH
Trigger: GTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCTT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp CAGGATCCTAGTAGTTTCAGTTGGCGAAAGCATCAGTaGGCCAGGCCCAATTACAGTAACCTCTATGAATTG +
Preference number: 3 (lower is better)
Translates to: QDPSSFSWRKHQ*ARPNYSNLYEL
Trigger: CAATTCATAGAGGTTACTGTAATTGGGCCTGGCTCACTGATGCTTTCGCCAACTGAAACTACTAGGATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCACAGACTTCTTTATCTaGTACCATGCCACATTAAAG +
Preference number: 3 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPTDFFI*YHATLK
Trigger: CTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGT...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR TCA 72 bp CCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTaGTTCCAGTCAGTCTTATCAGAAAATAGTCTCTTA +
Preference number: 3 (lower is better)
Translates to: PSQSGWRKLSAA*FQSVLSENSLL
Trigger: TAAGAGACTATTTTCTGATAAGACTGACTGGAATCAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 72 bp CAATTAAGGCACACTTACGTTGAACTGCACAGTGGCTaGTCACCATTCAGCCAAAAGACTTTTAGGTTCATG +
Preference number: 3 (lower is better)
Translates to: QLRHTYVELHSG*SPFSQKTFRFM
Trigger: CATGAACCTAAAAGTCTTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp CATCCACATCTTAGTAGCCAGTCACAAAGACCAACCTaGATGAAAAGGAGATTGGGAAATCTGGACTATGTG +
Preference number: 3 (lower is better)
Translates to: HPHLSSQSQRPT*MKRRLGNLDYV
Trigger: CACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGACTGGCTACTAAGATGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp TTTTCTATCTTTATTAGCTTGAAGGCCCTTAGTGGGTaGGCAGACAGAAAATCAGCTCCTCCAGAGTCTCTA +
Preference number: 3 (lower is better)
Translates to: FSIFISLKALSG*ADRKSAPPESL
Trigger: TAGAGACTCTGGAGGAGCTGATTTTCTGTCTGCCCACCCACTAAGGGCCTTCAAGCTAATAAAGATAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CAA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATACTAAGCCAGCAACTTaGCTTCGTTCTGGAAAGAGG +
Preference number: 3 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDTKPAT*LRSGKR
Trigger: CCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAGT...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTTGGAGTAAAATGAAATaGGTGCTGGTGAAGAGATTA +
Preference number: 3 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLWSKMK*VLVKRL
Trigger: TAATCTCTTCACCAGCACCAATTTCATTTTACTCCA...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp ACTAAGCCAGCAACTTTGCTTCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTAAGAGACAGCTACTAC +
Preference number: 3 (lower is better)
Translates to: TKPATLLRSGKR*YIISLLRDSYY
Trigger: GTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp TCCTTCTGTGAAAAATTCAGTAGCAGGCCAGAAAGATaGGTATTATGGTTCCTATACATGCCAGTCCTATTC +
Preference number: 3 (lower is better)
Translates to: SFCEKFSSRPER*VLWFLYMPVLF
Trigger: GAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCCTGCTACTGAATTTTTCACAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR-3UTR CAA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGGCCTGTCTGAATTCTTaGATACACTCTGAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERACLNS*IHSEGC
Trigger: GCAACCTTCAGAGTGTATCAAAGAATTCAGACAGGC...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGAGCCTGTCTGAATTCTTaGATACACTCTGAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: CIHCGYARLRNDSITLMGACLNS*IHSEGC
Trigger: GCAACCTTCAGAGTGTATCAAAGAATTCAGACAGGC...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGATGGATGAAAAGGAGATaGGGAAATCTGGACTATGTG +
Preference number: 3 (lower is better)
Translates to: CIHCGYARLRNDSITLMGWMKRR*GNLDYV
Trigger: CACATAGTCCAGATTTCCCAATCTCCTTTTCATCCA...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGCAGAAGAGGAGAATTTaGCTGCGTGTATTCATTCAG +
Preference number: 3 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKQKRRI*LRVFIQ
Trigger: CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTG...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATATGCCAGAAATGCTCTaGCAATTTCAGGCCATTATT +
Preference number: 3 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNMPEML*QFQAII
Trigger: AATAATGGCCTGAAATTGCAAGAGCATTTCTGGCAT...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR TCA 72 bp ACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTaGCAGGGCCCTGGTAATTTATTAGGGAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: TKLVLEMISILL*QGPGNLLGKSL
Trigger: AAGAGACTTCCCTAATAAATTACCAGGGCCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp TTATCAGAAAATAGTCTCTTATTATGGGCATCTACTTaGGCAACCCAGATGGTTGTACTAAGCAGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: LSENSLLLWAST*ATQMVVLSSCD
Trigger: GTCACAGCTGCTTAGTACAACCATCTGGGTTGCTCAAGTAGATGCCCATAATAAGAGACTATTTTCTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp TTTCAGTTTGATAACTGTACCTTCAGCAAGTATTTCTaGGTGCCTAATACGAAGAGGGACTGCTTCATGTGT +
Preference number: 3 (lower is better)
Translates to: FQFDNCTFSKYF*VPNTKRDCFMC
Trigger: ACACATGAAGCAGTCCCTCTTCGTATTAGGCACTCAGAAATACTTGCTGAAGGTACAGTTATCAAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR GCA 72 bp TTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTaGGTGTATTCATTCAGGCACAGACTTCTTTATCTT +
Preference number: 3 (lower is better)
Translates to: FNWERHRRGEFC*VYSFRHRLLYL
Trigger: AAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR GCA 72 bp CAAACATGTGAAAGCTCAACAGAATACAGTAGTCCCTaGTTAACTACAAGGAATGCTCTCCAAGAATTCCAA +
Preference number: 3 (lower is better)
Translates to: QTCESSTEYSSP*LTTRNALQEFQ
Trigger: TTGGAATTCTTGGAGAGCATTCCTTGTAGTTAAGCAGGGACTACTGTATTCTGTTGAGCTTTCACATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CCA 72 bp AGAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTaGACCTCAGAGGTATCTTTACATACAATTATTCCT +
Preference number: 3 (lower is better)
Translates to: RERLEAQNDQSC*TSEVSLHTIIP
Trigger: AGGAATAATTGTATGTAAAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCATGGAGTAAAATGAAATaGGTGCTGGTGAAGAGATTA +
Preference number: 3 (lower is better)
Translates to: CSTGKDTEEENFAACIHSWSKMK*VLVKRL
Trigger: TAATCTCTTCACCAGCACCAATTTCATTTTACTCCA...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR TCA 72 bp ACAAGGAATGCTCTCCAAGAATTCCAAGTTGATGTTTaGAACCACGGGTATACTGAACCCTGTATATACTAT +
Preference number: 3 (lower is better)
Translates to: TRNALQEFQVDV*NHGYTEPCIYY
Trigger: ATAGTATATACAGGGTTCAGTATACCCGTGGTTTCAAACATCAACTTGGAATTCTTGGAGAGCATTCCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTACAGACTTCTTTATCTaGTACCATGCCACATTAAAG +
Preference number: 3 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFTDFFI*YHATLK
Trigger: CTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGCGCGTTCCCGCCCCCTaGACACTAGCACATCCCTCC +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLRVPAP*TLAHPS
Trigger: GGAGGGATGTGCTAGTGTCCAGGGGGCGGGAACGCG...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACGGGCTCCCTCCTTCCTaGGCTGCGAACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYGLPPS*AANPLH
Trigger: GTGCAGAGGGTTCGCAGCTCAGGAAGGAGGGAGCCC...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTCCCGGCGCTCTCACCTaGGCTGCGAACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPPGALT*AANPLH
Trigger: GTGCAGAGGGTTCGCAGCTCAGGTGAGAGCGCCGGG...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR GCA 90 bp TGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTGAAGCCTGAGTCCCCAGTCATGAGGTGCTTTCCTGAATaGCCCATTTTCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: CGPPSAKGQQVKPESPVMRCFPE*PIFIPQ
Trigger: TTGTGGAATGAAAATGGGGCATTCAGGAAAGCACCT...CATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGACTCTGGGCAAGGGGATaGAGAAGTGCCGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGLWARG*RSAAGW
Trigger: CCAACCAGCGGCACTTCTTCATCCCCTTGCCCAGAG...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAACAGCAGGTGAAGCCTaGGTCCCCAGTCATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGTAGEA*VPSHGA
Trigger: AGCCCCATGACTGGGGACTCAGGCTTCACCTGCTGT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCCCAGCTCCCAAGGGCTaGCCCCTTTTGCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPPAPKG*PLLPEV
Trigger: AACTTCTGGCAAAAGGGGGCAGCCCTTGGGAGCTGG...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCCAGAAGGGGTGGACCTaGTACCCTTGTCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPQKGWT*YPCQGT
Trigger: GGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTG...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTGGGGCTTTGCCACCTaGCCTCCCAATGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLWGFAT*PPNDSG
Trigger: GCCTGAGTCATTGGGAGGCCAGGTGGCAAAGCCCCA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CAA 72 bp CTAGAGCACAGACCATGGTCTCCAGTTGGTGATGTATaGTATGGAAAGGTATCCTGTGGGCCGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LEHRPWSPVGDV*YGKVSCGPPSA
Trigger: AGCAGAGGGCGGCCCACAGGATACCTTTCCATACAATACATCACCAACTGGAGACCATGGTCTGTGCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGAGATCACCTCTGGTTTaGAACAGCAGTACCCCACTG +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLRSPLV*NSSTPL
Trigger: CAGTGGGGTACTGCTGTTTCAAACCAGAGGTGATCT...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGGGACAGGTGCTTTCCTaGATGCCCCATTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLGQVLS*MPHFHS
Trigger: GGAATGAAAATGGGGCATTCAGGAAAGCACCTGTCC...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGTATTGCCTATACAGCTaGCATACTGTGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLYCLYS*HTVGPG
Trigger: TCCTGGCCCCACAGTATGTCAGCTGTATAGGCAATA...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAAGGTGTCAGGAGGTGTaGGGGCAGTACCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGRCQEV*GQYLCA
Trigger: TGCACAGAGGTACTGCCCCCACACCTCCTGACACCT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGGGGCAAATCAAGACCTaGTCCTTTCTGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLGQIKT*SFLGSS
Trigger: AGAAGAACCCAGAAAGGAGCAGGTCTTGATTTGCCC...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTTTCCGACGCCTGGCTaGATTCTGGCGCCCATACCT +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCFPTPG*ILAPIP
Trigger: AGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTGAAGCCTGAGTCCCCAGTCATGGCATTCATCTTCATCTaGTTTCTTTCCTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: CGPPSAKGQQVKPESPVMAFIFI*FLSYVN
Trigger: ATTCACATAGGAAAGAAACCAGATGAAGATGAATGC...CATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGGTTTCCCATAATACTTaGGTGGGTGCCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLVSHNT*VGANGL
Trigger: AAGGCCATTGGCACCCACCCAAGTATTATGGGAAAC...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGACCAAGTCAATCCCCTaGCCCCCAGCTCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQTKSIP*PPAPKG
Trigger: GCCCTTGGGAGCTGGGGGCCAGGGGATTGACTTGGT...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGGCGTTTTCCGACGCCTaGCTGCATTCTGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGAFSDA*LHSGAH
Trigger: ATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGC...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTCTATGACAGCTGTTTaGGGATCAGTGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCSMTAV*GSVRCA
Trigger: GGCACACCTCACTGATCCTCAAACAGCTGTCATAGA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTTCTTTGATGCACTCTaGGGGTTGATGTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCFFDAL*GLMSGQ
Trigger: TTGCCCGGACATCAACCCTCAGAGTGCATCAAAGAA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAAAGGCACACTTACGTTaGACTGCACAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGKAHLR*TAQWLL
Trigger: GAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTGGACAGGTGCTTTCCTaGATGCCCCATTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCGQVLS*MPHFHS
Trigger: GGAATGAAAATGGGGCATTCAGGAAAGCACCTGTCC...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTGGTGTTTCTTCCCTGTaGCAGTTCTCCTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCGVSSL*QFSCGQ
Trigger: TTGACCACAGGAGAACTGGCACAGGGAAGAAACACC...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCGACATCACCAAGTCTaGTGCTCTCTGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIRHHQV*CSLGKG
Trigger: CCCCTTGCCCAGAGAGCACCAGACTTGGTGATGTCG...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCAGCCTGTGTGATGTGTaGGAGCTATCTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVSLCDV*ELSNRV
Trigger: TACCCTATTAGATAGCTCCCACACATCACACAGGCT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCTGTAGTATACTCTACTaGCCCAAAGTACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVCSILY*PKVPHP
Trigger: TGGGTGAGGTACTTTGGGCCAGTAGAGTATACTACA...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATACCAAGTCAATCCCCTaGCCCCCAGCTCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDTKSIP*PPAPKG
Trigger: GCCCTTGGGAGCTGGGGGCCAGGGGATTGACTTGGT...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGGCTTTTCAGAAGGGGTaGACCTGGTACCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLAFQKG*TWYPCQ
Trigger: CTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGC...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAGGTCCGCAATCCGCGTaGAGGCCCGGCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLGPQSA*RPGALT
Trigger: GGTGAGAGCGCCGGGCCTCCACGCGGATTGCGGACC...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR CCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCATGGGACTCCTGTTCCTaGGGCTCCCTCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPWDSCS*GSLLPL
Trigger: CAGAGGAAGGAGGGAGCCCCAGGAACAGGAGTCCCA...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTACAGCAGTACCCCACTaGGACGAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLTAVPH*DEVAVV
Trigger: AACTACAGCAACCTCGTCTCAGTGGGGTACTGCTGT...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTATGCACTCTGAGGGTTaGTGTCCGGGCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCMHSEG*CPGKSF
Trigger: AAAACTTTTGCCCGGACATCAACCCTCAGAGTGCAT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTGGCGAAAGCATCAGTaGGCCAGGCCCAATTACAGT +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCWRKHQ*ARPNYS
Trigger: ACTGTAATTGGGCCTGGCTCACTGATGCTTTCGCCA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAAGCTGTCGGCAGCTTaGTTCCAGTCAGTCTTATCA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCKLSAA*FQSVLS
Trigger: TGATAAGACTGACTGGAATCAAGCTGCCGACAGCTT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTGAGAGGGAGCATACATaGCTAGAGCACAGACCATGG +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLEREHT*LEHRPW
Trigger: CCATGGTCTGTGCTCTAGTCATGTATGCTCCCTCTC...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACAAGGGGATGAAGAAGTaGCGCTGGTTGGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYKGMKK*RWLGKS
Trigger: TGATTTGCCCAACCAGCGGCACTTCTTCATCCCCTT...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTCATCACCAAGTCTGGTaGTCTCTGGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPHHQVW*SLGKGM
Trigger: CATCCCCTTGCCCAGAGAGCACCAGACTTGGTGATG...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGAGACTTTTAGGTTCATaGAAAGCCCTGTATCAGGTG +
Preference number: 4 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLRLLGS*KALYQV
Trigger: CACCTGATACAGGGCTTTGCATGAACCTAAAAGTCT...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATTGGGACTCCTGTTCCTaGGGCTCCCTCCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDWDSCS*GSLLPE
Trigger: CTCAGGAAGGAGGGAGCCCCAGGAACAGGAGTCCCA...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAAGAGCAGTTCTTCGGTaGGACTCCTGTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPRAVLR*DSCSWG
Trigger: GCCCCAGGAACAGGAGTCCCACCGAAGAACTGCTCT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTACGCCTGGCTGCATTCTaGCGCCCATACCTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLRLAAF*RPYLGP
Trigger: CGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCG...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAGTTTGGAAGCCCTGGTaGGGAGGTCTCTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPVWKPW*GGLCSV
Trigger: GACAGAACAGAGACCTCCTCACCAGGGCTTCCAAAC...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGACTCTGGGCAAGGGGATaGAGAAGTGCCGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGLWARG*RSAAGW
Trigger: CCAACCAGCGGCACTTCTTCATCCCCTTGCCCAGAG...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCGGTGTGCCTTTCTGTTaGAATTATTTCCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVGVPFC*NYFHLD
Trigger: ATCCAAGTGGAAATAATTTCAACAGAAAGGCACACC...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTTCTATGACAGCTGTTTaGGGATCAGTGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLSMTAV*GSVRCA
Trigger: GGCACACCTCACTGATCCTCAAACAGCTGTCATAGA...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTATGGGTTCTCTTCTATaGCAGCTGTTTGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCMGSLL*QLFEDQ
Trigger: CTGATCCTCAAACAGCTGTCATAGAAGAGAACCCAT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCTTCTGTGATGATCTCTaGGGGTGGACTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPFCDDL*GWTSEQ
Trigger: TTGTTCAGAAGTCCACCCTCAGAGATCATCACAGAA...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTTCTTTGATGCACTCTaGGGGTTGATGTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCFFDAL*GLMSGQ
Trigger: TTGCCCGGACATCAACCCTCAGAGTGCATCAAAGAA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTGGCGAAAGCATCAGTaGGCCAGGCCCAATTACAGT +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIWRKHQ*ARPNYS
Trigger: ACTGTAATTGGGCCTGGCTCACTGATGCTTTCGCCA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATCTCAGGCCACCTCGGTaGATCAGTTCCACCCTACAG +
Preference number: 4 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNLRPPR*ISSTLQ
Trigger: CTGTAGGGTGGAACTGATTCACCGAGGTGGCCTGAG...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATCGCGCATTCCCCTCCTaGAGCCAGCACCGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNRAFPS*SQHRVF
Trigger: GAAAACGCGGTGCTGGCTTCAGGAGGGGAATGCGCG...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR GCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGCATCACCAAGTCTGGTaGTCTCTGGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQHHQVW*SLGKGM
Trigger: CATCCCCTTGCCCAGAGAGCACCAGACTTGGTGATG...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCGAACTAGTAAGATGTTaGCTTGGGCATGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVELVRC*LGHGFN
Trigger: ATTGAATCCATGCCCAAGGCAACATCTTACTAGTTC...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCCACCTTCTGCAAGTTaGCCCACAGTGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIPPSAS*PTVFSV
Trigger: GACACTGAACACTGTGGGCCAACTTGCAGAAGGTGG...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTGTAGTATACTCTACTaGCCCAAAGTACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCCSILY*PKVPHP
Trigger: TGGGTGAGGTACTTTGGGCCAGTAGAGTATACTACA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCACAGAAGGGGTGGACCTaGTACCCTTGTCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSQKGWT*YPCQGT
Trigger: GGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTG...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTGCTTTTCAGAAGGGGTaGACCTGGTACCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPAFQKG*TWYPCQ
Trigger: CTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGC...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAAGCGACGGCCTGCTTTaGGGGAGTTCCCGGGACGTC +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLSDGLL*GSSRDV
Trigger: GACGTCCCGGGAACTCCCCCAAAGCAGGCCGTCGCT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACGCTTGCTCCAAAGTTTaGAACTTTGGATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYACSKV*NFGCLG
Trigger: TCCCAAGCATCCAAAGTTTCAAACTTTGGAGCAAGC...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTTCTGTGATGATCTCTaGGGGTGGACTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLFCDDL*GWTSEQ
Trigger: TTGTTCAGAAGTCCACCCTCAGAGATCATCACAGAA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTATGCACTCTGAGGGTTaGTGTCCGGGCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLMHSEG*CPGKSF
Trigger: AAAACTTTTGCCCGGACATCAACCCTCAGAGTGCAT...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACTTCTCTGATTCACAGTaGGGGTTTACTTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYFSDSQ*GFTSGT
Trigger: AGTCCCAGAAGTAAACCCTCACTGTGAATCAGAGAA...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTCTATCTTTATTAGCTTaGAGGCCCTTAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLLSLLA*RPLVGG
Trigger: CCCACCCACTAAGGGCCTTCAAGCTAATAAAGATAG...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCATGGGGCCAGGACAGGTaGTTTCCTGAATGCCCCATT +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSWGQDR*FPECPI
Trigger: AATGGGGCATTCAGGAAAGCACCTGTCCTGGCCCCA...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGCCAGGGGTAACCTTATaGTCTCCTATTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLPGVTL*SPIVNA
Trigger: TGCATTGACAATAGGAGAGCATAAGGTTACCCCTGG...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTAGAGCAGTTCTTCGGTaGGACTCCTGTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFRAVLR*DSCSWG
Trigger: GCCCCAGGAACAGGAGTCCCACCGAAGAACTGCTCT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGACGACATCACCAAGTCTaGTGCTCTCTGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGRHHQV*CSLGKG
Trigger: CCCCTTGCCCAGAGAGCACCAGACTTGGTGATGTCG...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATTTGGGTGGGTGCCAATaGCCTTTGGAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDLGGCQ*PLEPGK
Trigger: TTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAA...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTAGTCCCTCCCCTCTCTaGAGGTTTCCCATAATACTT +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCSPSPL*RFPIIL
Trigger: AAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAGCAGGCCAGAAAGATaGGTATTATGGTTCCTATAC +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCSRPER*VLWFLY
Trigger: GTATAGGAACCATAATACCCATCTTTCTGGCCTGCT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATCTGAGTCCCCAGTCATaGGGCTTTGCCACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNLSPQS*GFATWP
Trigger: AGGCCAGGTGGCAAAGCCCCATGACTGGGGACTCAG...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CAA 72 bp CTTTCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTaGTTAATGGCACTGAGTTTGAACACACACAGGATC +
Preference number: 4 (lower is better)
Translates to: LSTERSDRFTLG*LMALSLNTHRI
Trigger: GATCCTGTGTGTGTTCAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGAGATCACCTCTGGTTTaGAACAGCAGTACCCCACTG +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQRSPLV*NSSTPL
Trigger: CAGTGGGGTACTGCTGTTTCAAACCAGAGGTGATCT...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTTTTCTTGTTCTGCTTaGTCAGGTCATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLFSCSA*SGHHLC
Trigger: ACAGAGGTGATGACCTGATCAAGCAGAACAAGAAAA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGATATTCCTCCACAGTTaGCTTCTCAAAGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLIFLHS*LLKGFP
Trigger: GGGAAATCCTTTGAGAAGTCAACTGTGGAGGAATAT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTTCTTTGATGTCCCCTaGGGGTTGACTTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGFFDVP*GLTSGQ
Trigger: TTGTCCAGAAGTCAACCCTCAGGGGACATCAAAGAA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTTCTTTGATACACTCTaGAGGTTGCATTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCFFDTL*RLHFGH
Trigger: GTGTCCAAAATGCAACCTTCAGAGTGTATCAAAGAA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCTATCTAATAGGGTATaGCTTCATTCAGGCCTATCC +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYLSNRV*LHSGLS
Trigger: GGATAGGCCTGAATGAAGTCATACCCTATTAGATAG...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTTTGTGCCCTCTGATTaGCTTAAGCCTGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGFVPSD*LKPGLH
Trigger: GTGTAAGCCAGGCTTAAGTCAATCAGAGGGCACAAA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCTGGTTGACAAAGATCTaGAGAACAGTTCTGTACACT +
Preference number: 4 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPWLTKI*RTVLYT
Trigger: AGTGTACAGAACTGTTCTTCAGATCTTTGTCAACCA...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTCTTTCTGGGTTCTTCTaGATCTGTTTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPLSGFF*ICLEAL
Trigger: CAGGGCTTCCAAACAGATGCAGAAGAACCCAGAAAG...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGGCAACAGCAGCTACATaGAGAGTAAATGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGATAAT*RVNGFP
Trigger: GGGGAAACCATTTACTCTGCATGTAGCTGCTGTTGC...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAAGAGGAGAATTTTGCTaGGTGTATTCATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGRGEFC*VYSFRH
Trigger: GTGCCTGAATGAATACACGCAGCAAAATTCTCCTCT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAACACTTACGTTGAACTaGACAGTGGCTGCTCACCAT +
Preference number: 4 (lower is better)
Translates to: HPSARVKDHELLRRSTRQTLTLN*TVAAHH
Trigger: ATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGT...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGATGTTTGCCTTCCCATTaGCAAACCCCATTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGCLPSH*QTPLAK
Trigger: TTTAGCTAATGGGGTTTGGCAATGGGAAGGCAAACA...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATAGGGCTGCCCCCTTTTaGCAGAAGTTTCAACCCACA +
Preference number: 4 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNRAAPF*QKFQPT
Trigger: TGTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCT...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTTCCACAAGTGAGGCTTaGTGGGTCCTTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLSTSEA*WVLFIL
Trigger: CAAAATGAAAAGGACCCAGCAAGCCTCACTTGTGGA...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTCTAAGCCAGCAACTTTaGTTCGTTCTGGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCLSQQL*FVLERG
Trigger: ACCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAG...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTTCTTCCTGTCATATCTaGTTCTCTCCAGGGGTAACC +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPSSCHI*FSPGVT
Trigger: GGTTACCCCTGGAGAGAAGCAGATATGACAGGAAGA...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATAGGTGTCAGGAGGTGTaGGGGCAGTACCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNRCQEV*GQYLCA
Trigger: TGCACAGAGGTACTGCCCCCACACCTCCTGACACCT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATGGTGCCAATGGCCTTTaGAGCCAGGGAAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNGANGL*SQGKLL
Trigger: AAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACC...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTTTGGGTGGGTGCCAATaGCCTTTGGAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFLGGCQ*PLEPGK
Trigger: TTTCCCTGGCTCCAAAGGCCATTGGCACCCACCCAA...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTACAAGTGAGGCTTGCTaGGTCCTTTTCATTTTGTTA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCTSEAC*VLFILL
Trigger: TAACAAAATGAAAAGGACCCAGCAAGCCTCACTTGT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCGAAAGATGGGTATTATaGTTCCTATACATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPERWVL*FLYMPV
Trigger: GACTGGCATGTATAGGAACCATAATACCCATCTTTC...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGCTAGAGCACAGACCATaGTCTCCAGTTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGLEHRP*SPVGDV
Trigger: TACATCACCAACTGGAGACCATGGTCTGTGCTCTAG...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CAA 72 bp GCTGCGTGTATTCATTCAGGCACAGACTTCTTTATCTaGTACCATGCCACATTAAAGCACGGCACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: AACIHSGTDFFI*YHATLKHGTKL
Trigger: AAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGTGCCTGAATGAATACACGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
3UTR CAA 72 bp GACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTaGAACACACACAGGATCCTAGTAGTTTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: DRFTLGLLMALS*NTHRILVVSVG
Trigger: GCCAACTGAAACTACTAGGATCCTGTGTGTGTTCAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGACAGCAGTACCCCACTaGGACGAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERTAVPH*DEVAVV
Trigger: AACTACAGCAACCTCGTCTCAGTGGGGTACTGCTGT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTGATGTTTCTCCTGTGTaGGAACTGTTATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCDVSPV*ELLCLT
Trigger: TGTTAAACATAACAGTTCTCACACAGGAGAAACATC...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACTTCTTTGATACACTCTaGAGGTTGCATTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYFFDTL*RLHFGH
Trigger: GTGTCCAAAATGCAACCTTCAGAGTGTATCAAAGAA...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTAAAGACCAACCTGGATaGAAAGGAGATTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCKDQPG*KGDWEI
Trigger: GATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTTCCAAGTTGATGTTTaGAACCACGGGTATACTGAA +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLFQVDV*NHGYTE
Trigger: TTCAGTATACCCGTGGTTTCAAACATCAACTTGGAA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCATTTGTGCCCTCTGATTaGCTTAAGCCTGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPFVPSD*LKPGLH
Trigger: GTGTAAGCCAGGCTTAAGTCAATCAGAGGGCACAAA...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGACATTTTGTTAGTTGTTaGGTCCAAGACGACAAACTC +
Preference number: 4 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGHFVSC*VQDDKL
Trigger: GAGTTTGTCGTCTTGGACTCAACAACTAACAAAATG...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAGCCATACCAGTAAAATaGTGGATCCAGGTAGCAACC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPAIPVK*WIQVAT
Trigger: GGTTGCTACCTGGATCCATCATTTTACTGGTATGGC...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGCTCCCTCCTTCCTCTaGACGACACAAAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSAPSFL*TTQSSF
Trigger: AAAACTGCTTTGTGTCGTTCAGAGGAAGGAGGGAGC...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR GCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAGCAACAGCAGCTACATaGAGAGTAAATGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPATAAT*RVNGFP
Trigger: GGGGAAACCATTTACTCTGCATGTAGCTGCTGTTGC...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTAGAGGAGAATTTTGCTaGGTGTATTCATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCRGEFC*VYSFRH
Trigger: GTGCCTGAATGAATACACGCAGCAAAATTCTCCTCT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCTACTCAGAATCGGGTaGAGTTTAAAATGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCLLRIG*SLKCRN
Trigger: ATTCCTACATTTTAAACTGCACCCGATTCTGAGTAG...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTGCCAGAAATGCTCTTaGAATTTCAGGCCATTATTT +
Preference number: 4 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCCQKCS*NFRPLF
Trigger: AAATAATGGCCTGAAATTGCAAGAGCATTTCTGGCA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGACACTTACGTTGAACTaGACAGTGGCTGCTCACCAT +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQTLTLN*TVAAHH
Trigger: ATGGTGAGCAGCCACTGTGCAGTTCAACGTAAGTGT...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGCCACCTTCTGCAAGTTaGCCCACAGTGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERPPSAS*PTVFSV
Trigger: GACACTGAACACTGTGGGCCAACTTGCAGAAGGTGG...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTCTTGAAGATCACCTCTaGTTTGAAACAGCAGTACCC +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPLEDHL*FETAVP
Trigger: GGGTACTGCTGTTTCAAACCAGAGGTGATCTTCAAG...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGTGCCAATGGCCTTTaGAGCCAGGGAAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKGANGL*SQGKLL
Trigger: AAGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACC...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATCCCATAATACTTGGGTaGGTGCCAATGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDPIILG*VPMAFG
Trigger: TCCAAAGGCCATTGGCACCCACCCAAGTATTATGGG...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAAGTCCCTCCCCTCTCTaGAGGTTTCCCATAATACTT +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPSPSPL*RFPIIL
Trigger: AAGTATTATGGGAAACCTCCAGAGAGGGGAGGGACT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTGCAACCGTCACAATCTaGATGGAGAAAGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFATVTI*MEKAVG
Trigger: GCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGC...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCTAACAGGTACTAACTaGGCTTGTGTACCATTAATC +
Preference number: 4 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYLTGTN*ACVPLI
Trigger: GATTAATGGTACACAAGCCCAGTTAGTACCTGTTAG...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTTTTCTTGTTCTGCTTaGTCAGGTCATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGFSCSA*SGHHLC
Trigger: ACAGAGGTGATGACCTGATCAAGCAGAACAAGAAAA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAATAGGGTTTCATCATTaGGTGACTTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPIGFHH*VTSSAN
Trigger: GTTCGCCGAAGAAGTCACTCAATGATGAAACCCTAT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCAAAGACCAACCTGGATaGAAAGGAGATTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIKDQPG*KGDWEI
Trigger: GATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTT...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATAAGGCACACTTACGTTaGACTGCACAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNKAHLR*TAQWLL
Trigger: GAGCAGCCACTGTGCAGTTCAACGTAAGTGTGCCTT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGATATTGCCTATACAGCTaGCATACTGTGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGYCLYS*HTVGPG
Trigger: TCCTGGCCCCACAGTATGTCAGCTGTATAGGCAATA...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCRSGKR*YIISLL
Trigger: TAGAAGGGAAATAATGTATCACCTCTTTCCAGAACG...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGAATTCTTATATCCAATaGCATCAATGGAAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLNSYIQ*HQWKRQ
Trigger: CTGACGCTTCCATTGATGTCATTGGATATAAGAATT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGAAACAGAGTAAACAGTaGTGTTTTGATTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLKQSKQ*CFDSQG
Trigger: TCCCTGAGAATCAAAACATCACTGTTTACTCTGTTT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCATGGTCTCCAGTTGGTaGTGTATTGTATGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIMVSSW*CIVWKG
Trigger: ACCTTTCCATACAATACATCACCAACTGGAGACCAT...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR TCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTTCAGCAAGTATTTCTaGGTGCCTAATACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIFSKYF*VPNTKR
Trigger: CCTCTTCGTATTAGGCACTCAGAAATACTTGCTGAA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGCTTAACTACAAGGAATaGTCTCCAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: STERSDRFTLGLLMALSLLNYKE*SPRIPS
Trigger: ACTTGGAATTCTTGGAGAGCATTCCTTGTAGTTAAG...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGGAACTGCACAGTGGCTaGTCACCATTCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERELHSG*SPFSQK
Trigger: CTTTTGGCTGAATGGTGAGCAGCCACTGTGCAGTTC...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTGTTTGCCTTCCCATTaGCAAACCCCATTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDICLPSH*QTPLAK
Trigger: TTTAGCTAATGGGGTTTGGCAATGGGAAGGCAAACA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTATGGGGCCAGGACAGGTaGTTTCCTGAATGCCCCATT +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLWGQDR*FPECPI
Trigger: AATGGGGCATTCAGGAAAGCACCTGTCCTGGCCCCA...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCACTAAGCCAGCAACTTTaGTTCGTTCTGGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPLSQQL*FVLERG
Trigger: ACCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAG...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGTATAGCTGGGGTATATaGAGGTGTCAGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKYSWGI*RCQEVW
Trigger: CCACACCTCCTGACACCTCCATATACCCCAGCTATA...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGTTTCCCATAATACTTaGGTGGGTGCCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSVSHNT*VGANGL
Trigger: AAGGCCATTGGCACCCACCCAAGTATTATGGGAAAC...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAATATGAAATGGAGTATTaGCCAGAGCTGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: HPSARVKDHELLRRSTRQYEMEY*PELRTS
Trigger: GGATGTTCTCAGCTCTGGCCAATACTCCATTTCATA...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGCAACCGTCACAATCTaGATGGAGAAAGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNATVTI*MEKAVG
Trigger: GCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGAAGGCCCTTAGTGGGTaGGCAGACAGAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERKALSG*ADRKSA
Trigger: AGCTGATTTTCTGTCTGCCCACCCACTAAGGGCCTT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
3UTR CAA 72 bp ATACATTATTTCCCTTCTAAGAGACAGCTACTACTATaGCCTATACAGCTGACATACTGTGGGGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: IHYFPSKRQLLL*PIQLTYCGART
Trigger: TGTCCTGGCCCCACAGTATGTCAGCTGTATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATGCTTGCTCCAAAGTTTaGAACTTTGGATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDACSKV*NFGCLG
Trigger: TCCCAAGCATCCAAAGTTTCAAACTTTGGAGCAAGC...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAATAGGGTTTCATCATTaGGTGACTTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSIGFHH*VTSSAN
Trigger: GTTCGCCGAAGAAGTCACTCAATGATGAAACCCTAT...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTCTTTGATGTCCCCTaGGGGTTGACTTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFFDVP*GLTSGQ
Trigger: TTGTCCAGAAGTCAACCCTCAGGGGACATCAAAGAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGGATTCCCCTCTCCCTaGATTTTCTGGTATAAGCTT +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSGFPSP*IFWYKL
Trigger: AAGCTTATACCAGAAAATTCAGGGAGAGGGGAATCC...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTAAAACAAGGGTTACTTaGATACAAGCACTGTCATAC +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLKTRVT*IQALSY
Trigger: GTATGACAGTGCTTGTATTCAAGTAACCCTTGTTTT...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCACCAAGAATTCCAAGTTaGTGTTTGAAACCACGGGTA +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPPRIPS*CLKPRV
Trigger: TACCCGTGGTTTCAAACATCAACTTGGAATTCTTGG...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGAAGCTGTCGGCAGCTTaGTTCCAGTCAGTCTTATCA +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERKLSAA*FQSVLS
Trigger: TGATAAGACTGACTGGAATCAAGCTGCCGACAGCTT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATTCCAGAGTCTCTAGATaGGGCATCCATCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNSRVSR*GIHLLE
Trigger: CTCTAGCAGATGGATGCCTCATCTAGAGACTCTGGA...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGCTTTCTGGGTTCTTCTaGATCTGTTTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKLSGFF*ICLEAL
Trigger: CAGGGCTTCCAAACAGATGCAGAAGAACCCAGAAAG...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGCAAATCAAGACCTaGTCCTTTCTGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKGQIKT*SFLGSS
Trigger: AGAAGAACCCAGAAAGGAGCAGGTCTTGATTTGCCC...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAAGAAGAGGAGAATTTTaGTGCGTGTATTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: HPSARVKDHELLRRSTRQRRGEF*CVYSFR
Trigger: CCTGAATGAATACACGCAGCAAAATTCTCCTCTTCT...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAAGGGCTGCCCCCTTTTaGCAGAAGTTTCAACCCACA +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLRAAPF*QKFQPT
Trigger: TGTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCATCCACAAGTGAGGCTTaGTGGGTCCTTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSSTSEA*WVLFIL
Trigger: CAAAATGAAAAGGACCCAGCAAGCCTCACTTGTGGA...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGATGAAGAAGTGCCGCTaGTTGGGCAAATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERMKKCR*LGKSRP
Trigger: AGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCAT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTTCTGGACTATGTGCCTaGAGTAAAATGAAATTGGTG +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPSGLCA*SKMKLV
Trigger: CACCAATTTCATTTTACTCCAGGCACATAGTCCAGA...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTCTGGACTATGTGCCTaGAGTAAAATGAAATTGGTG +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDISGLCA*SKMKLV
Trigger: CACCAATTTCATTTTACTCCAGGCACATAGTCCAGA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGTATGAAATGGAGTATTaGCCAGAGCTGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQYEMEY*PELRTS
Trigger: GGATGTTCTCAGCTCTGGCCAATACTCCATTTCATA...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTATGGGTTCTCTTCTATaGCAGCTGTTTGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFMGSLL*QLFEDQ
Trigger: CTGATCCTCAAACAGCTGTCATAGAAGAGAACCCAT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGGTTTCATCATTGAGTaGCTTCTTCGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNGFIIE*LLRRTL
Trigger: CAGAGTTCGCCGAAGAAGTCACTCAATGATGAAACC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGATGTCCCCTGAGGGTTaGCTTCTGGACAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKMSPEG*LLDKCF
Trigger: AAAACATTTGTCCAGAAGTCAACCCTCAGGGGACAT...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGTTCTCTGATTCACAGTaGGGGTTTACTTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKFSDSQ*GFTSGT
Trigger: AGTCCCAGAAGTAAACCCTCACTGTGAATCAGAGAA...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCAAAACAAGGGTTACTTaGATACAAGCACTGTCATAC +
Preference number: 4 (lower is better)
Translates to: LVPCHIKARHQACPRNDIKTRVT*IQALSY
Trigger: GTATGACAGTGCTTGTATTCAAGTAACCCTTGTTTT...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGCCATACCAGTAAAATaGTGGATCCAGGTAGCAACC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNAIPVK*WIQVAT
Trigger: GGTTGCTACCTGGATCCATCATTTTACTGGTATGGC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGGTGTTTCTTCCCTGTaGCAGTTCTCCTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIGVSSL*QFSCGQ
Trigger: TTGACCACAGGAGAACTGGCACAGGGAAGAAACACC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTATGATCACTAAGGATTaGTTTCCGGACAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLMITKD*FPDKFL
Trigger: AAGAAATTTGTCCGGAAAGCAATCCTTAGTGATCAT...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGCTCCTGAAAGAGTGTaGAGAACCGTAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKAPERV*RTVKDN
Trigger: GTTATCCTTTACGGTTCTCCACACTCTTTCAGGAGC...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCTTGAAGATCACCTCTaGTTTGAAACAGCAGTACCC +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFLEDHL*FETAVP
Trigger: GGGTACTGCTGTTTCAAACCAGAGGTGATCTTCAAG...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGAGCCTGTGTGATGTGTaGGAGCTATCTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKSLCDV*ELSNRV
Trigger: TACCCTATTAGATAGCTCCCACACATCACACAGGCT...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGCACATAATGTTCAACTaGGAAAGACACAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQHIMFN*ERHRRG
Trigger: TCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTG...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTAAGCCCTGTATCAGGTaGTACTATCAATTTCATTAC +
Preference number: 4 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPKPCIR*YYQFHY
Trigger: GTAATGAAATTGATAGTACCACCTGATACAGGGCTT...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTATATAGCTGGGGTATATaGAGGTGTCAGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLYSWGI*RCQEVW
Trigger: CCACACCTCCTGACACCTCCATATACCCCAGCTATA...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAGCTGTACGCGCTTTGTaGCAGGTTCATGGTCAATAC +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLAVRAL*QVHGQY
Trigger: GTATTGACCATGAACCTGCCACAAAGCGCGTACAGC...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAAATGACACTGATGCCTaGGATATGTTCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSNDTDA*DMFIFC
Trigger: GCAGAAAATGAACATATCTCAGGCATCAGTGTCATT...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGGTTTCATCATTGAGTaGCTTCTTCGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIGFIIE*LLRRTL
Trigger: CAGAGTTCGCCGAAGAAGTCACTCAATGATGAAACC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCTATCTAATAGGGTATaGCTTCATTCAGGCCTATCC +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFLSNRV*LHSGLS
Trigger: GGATAGGCCTGAATGAAGTCATACCCTATTAGATAG...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGCCAAGAATTCCAAGTTaGTGTTTGAAACCACGGGTA +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERPRIPS*CLKPRV
Trigger: TACCCGTGGTTTCAAACATCAACTTGGAATTCTTGG...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAACCCTACAGGGTTCCTaGTCCTTAATACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPITLQGS*SLIPNP
Trigger: TGGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGT...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGACAACATGCCAGAAATaGTCTTGCAATTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKTTCQK*SCNFRP
Trigger: TGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGT...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTACAACATGCCAGAAATaGTCTTGCAATTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFTTCQK*SCNFRP
Trigger: TGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGAGGTGCTTTCCTGAATaGCCCATTTTCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKRCFPE*PIFIPQ
Trigger: TTGTGGAATGAAAATGGGGCATTCAGGAAAGCACCT...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAATGAAGAAGTGCCGCTaGTTGGGCAAATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIMKKCR*LGKSRP
Trigger: AGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCAT...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGCTCCTGAAAGAGTGTaGAGAACCGTAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNAPERV*RTVKDN
Trigger: GTTATCCTTTACGGTTCTCCACACTCTTTCAGGAGC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTGTGCCAGTTCTCCTGTaGTCAAAGAGAGTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFVPVLL*SKRVFL
Trigger: TAAGAAAACTCTCTTTGACCACAGGAGAACTGGCAC...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAAAGCCCTGTATCAGGTaGTACTATCAATTTCATTAC +
Preference number: 4 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPKPCIR*YYQFHY
Trigger: GTAATGAAATTGATAGTACCACCTGATACAGGGCTT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGAACTTTGCTTCGTTCTaGAAAGAGGTGATACATTAT +
Preference number: 4 (lower is better)
Translates to: KARHQACPRNDIHFVVTGNFASF*KEVIHY
Trigger: ATAATGTATCACCTCTTTCCAGAACGAAGCAAAGTT...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGAAGGATTTCCCACATTaGTTAAGATGCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERKDFPH*LRCRCF
Trigger: GAAACACCTGCATCTTAATCAATGTGGGAAATCCTT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTAAGGATTTCCCACATTaGTTAAGATGCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFKDFPH*LRCRCF
Trigger: GAAACACCTGCATCTTAATCAATGTGGGAAATCCTT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATATATTCCTCCACAGTTaGCTTCTCAAAGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNIFLHS*LLKGFP
Trigger: GGGAAATCCTTTGAGAAGTCAACTGTGGAGGAATAT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGTGTGCCTTTCTGTTaGAATTATTTCCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKGVPFC*NYFHLD
Trigger: ATCCAAGTGGAAATAATTTCAACAGAAAGGCACACC...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAATGTCCCCTGAGGGTTaGCTTCTGGACAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLMSPEG*LLDKCF
Trigger: AAAACATTTGTCCAGAAGTCAACCCTCAGGGGACAT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAGGATTCCCCTCTCCCTaGATTTTCTGGTATAAGCTT +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLGFPSP*IFWYKL
Trigger: AAGCTTATACCAGAAAATTCAGGGAGAGGGGAATCC...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGTTCCAAGTTGATGTTTaGAACCACGGGTATACTGAA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKFQVDV*NHGYTE
Trigger: TTCAGTATACCCGTGGTTTCAAACATCAACTTGGAA...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGACATTTTGTTAGTTGTTaGGTCCAAGACGACAAACTC +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGHFVSC*VQDDKL
Trigger: GAGTTTGTCGTCTTGGACTCAACAACTAACAAAATG...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCGTTCTGGAAAGAGGTaGTACATTATTTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFRSGKR*YIISLL
Trigger: TAGAAGGGAAATAATGTATCACCTCTTTCCAGAACG...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGAAGAAGAGGAGAATTTTaGTGCGTGTATTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGRRGEF*CVYSFR
Trigger: CCTGAATGAATACACGCAGCAAAATTCTCCTCTTCT...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATCTTAACTACAAGGAATaGTCTCCAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDLNYKE*SPRIPS
Trigger: ACTTGGAATTCTTGGAGAGCATTCCTTGTAGTTAAG...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATAGACTTTTAGGTTCATaGAAAGCCCTGTATCAGGTG +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNRLLGS*KALYQV
Trigger: CACCTGATACAGGGCTTTGCATGAACCTAAAAGTCT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGCACATAATGTTCAACTaGGAAAGACACAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKHIMFN*ERHRRG
Trigger: TCCTCTTCTGTGTCTTTCCCAGTTGAACATTATGTG...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTAATGATCAGAGCTGTTaGACCTCAGAGGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFNDQSC*TSEVSL
Trigger: TAAAGATACCTCTGAGGTCCAACAGCTCTGATCATT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGAACAAGTGAGGCTTGCTaGGTCCTTTTCATTTTGTTA +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGTSEAC*VLFILL
Trigger: TAACAAAATGAAAAGGACCCAGCAAGCCTCACTTGT...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGTTTTCTGATGTTGAATaGGATGATCTTTTCGCCAGA +
Preference number: 4 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKFSDVE*DDLFAR
Trigger: TCTGGCGAAAAGATCATCTCATTCAACATCAGAAAA...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTTTCTGATGTTGAATaGGATGATCTTTTCGCCAGA +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFSDVE*DDLFAR
Trigger: TCTGGCGAAAAGATCATCTCATTCAACATCAGAAAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTTTCCACAATTCTCTaGTCATATTTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERFSTIL*SYLRFS
Trigger: GGAGAACCTCAAATATGATCAGAGAATTGTGGAAAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGAGGATCAGTGAGGTGTaGCTTTCTGTTGAAATTATT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERRISEV*LSVEII
Trigger: AATAATTTCAACAGAAAGGCACACCTCACTGATCCT...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GGCCAGAAAGATGGGTATTATGGTTCCTATACATGCCAGTCCTATTCACAAAATATGATCACTAAGGATTaGTTTCCGGACAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GQKDGYYGSYTCQSYSQNMITKD*FPDKFL
Trigger: AAGAAATTTGTCCGGAAAGCAATCCTTAGTGATCAT...ATTTTGTGAATAGGACTGGCATGTATAGGAACCATAATACCCATCTTTCTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR GCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGCTACTCAGAATCGGGTaGAGTTTAAAATGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERLLRIG*SLKCRN
Trigger: ATTCCTACATTTTAAACTGCACCCGATTCTGAGTAG...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTGCCAGAAATGCTCTTaGAATTTCAGGCCATTATTT +
Preference number: 4 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERCQKCS*NFRPLF
Trigger: AAATAATGGCCTGAAATTGCAAGAGCATTTCTGGCA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGTGCCAGTTCTCCTGTaGTCAAAGAGAGTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIVPVLL*SKRVFL
Trigger: TAAGAAAACTCTCTTTGACCACAGGAGAACTGGCAC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATTCTTATGTTTCAGACTaGGATGTGATATACATCATG +
Preference number: 4 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDSYVSD*DVIYIM
Trigger: CATGATGTATATCACATCCCAGTCTGAAACATAAGA...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATAATGATCAGAGCTGTTaGACCTCAGAGGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNNDQSC*TSEVSL
Trigger: TAAAGATACCTCTGAGGTCCAACAGCTCTGATCATT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp TGTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAAACTTTGCTTCGTTCTaGAAAGAGGTGATACATTAT +
Preference number: 4 (lower is better)
Translates to: CSTGKDTEEENFAACIHSNFASF*KEVIHY
Trigger: ATAATGTATCACCTCTTTCCAGAACGAAGCAAAGTT...TGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGATTGATACATATTGCTTaGTCCAAGTGTTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CIHCGYARLRNDSITLMGLIHIA*SKCLSL
Trigger: CAAAGACAAACACTTGGAGCAAGCAATATGTATCAA...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATAGGATCAGTGAGGTGTaGCTTTCTGTTGAAATTATT +
Preference number: 4 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNRISEV*LSVEII
Trigger: AATAATTTCAACAGAAAGGCACACCTCACTGATCCT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAGAACTAGTAAGATGTTaGCTTGGGCATGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIELVRC*LGHGFN
Trigger: ATTGAATCCATGCCCAAGGCAACATCTTACTAGTTC...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTACTCTCCTATTGTCAATaGATTTTCTTGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLLSYCQ*IFLVRL
Trigger: CAGCCTTACCAAGAAAATGCATTGACAATAGGAGAG...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CCA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTTCTTATGTTTCAGACTaGGATGTGATATACATCATG +
Preference number: 4 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFSYVSD*DVIYIM
Trigger: CATGATGTATATCACATCCCAGTCTGAAACATAAGA...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR TCA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATATTTTCCACAATTCTCTaGTCATATTTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIFSTIL*SYLRFS
Trigger: GGAGAACCTCAAATATGATCAGAGAATTGTGGAAAA...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR GCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTATTGATACATATTGCTTaGTCCAAGTGTTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLLIHIA*SKCLSL
Trigger: CAAAGACAAACACTTGGAGCAAGCAATATGTATCAA...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CCA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAGCATTCATCTTCATCTaGTTTCTTTCCTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLAFIFI*FLSYVN
Trigger: ATTCACATAGGAAAGAAACCAGATGAAGATGAATGC...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS CCA 90 bp CGGCCTGCTTTGGGGGAGTTCCCGGGACGTCGCGTTCCCGCCCCCTaGACACTAGCACATCCCTCCCTGCAGGTCCGCAATCCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: RPALGEFPGRRVPAP*TLAHPSLQVRNPRG
Trigger: TCCACGCGGATTGCGGACCTGCAGGGAGGGATGTGCTAGTGTCCAGGGGGCGGGAACGCGACGTCCCGGGAACTCCCCCAAAGCAGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS GCA 90 bp CGCATTCCCCTCCTGAAGCCAGCACCGCGTTTTCCGACGCCTGGCTaGATTCTGGCGCCCATACCTCGGCCCGCACCGAGCATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RIPLLKPAPRFPTPG*ILAPIPRPAPSIFQ
Trigger: TTGGAAGATGCTCGGTGCGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAGGGGAATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CCA 90 bp AACGCGCATTCCCCTCCTGAAGCCAGCACCGCGTTTTCCGACGCCTaGCTGCATTCTGGCGCCCATACCTCGGCCCGCACCGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: NAHSPPEASTAFSDA*LHSGAHTSARTEHL
Trigger: AAGATGCTCGGTGCGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAGGGGAATGCGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS TCA 90 bp TTGTGGCAGGTTCATGGTCAATACAATAAACGCGCATTCCCCTCCTaGAGCCAGCACCGCGTTTTCCGACGCCTGGCTGCATTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: LWQVHGQYNKRAFPS*SQHRVFRRLAAFWR
Trigger: GCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAGGGGAATGCGCGTTTATTGTATTGACCATGAACCTGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR CAA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGGGGTGCCAATGGCCTTaGGAGCCAGGGAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLGCQWP*EPGKTP
Trigger: AGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCC...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TGTGGGCCGCCCTCTGCTAAGGGACAGCAGGTGAAGCCTGAGTCCCCAGTCATGTGTCAATGCATTTTCTaGGTAAGGCTGCTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: CGPPSAKGQQVKPESPVMCQCIF*VRLLAV
Trigger: AACTGCCAGCAGCCTTACCAAGAAAATGCATTGACA...CATGACTGGGGACTCAGGCTTCACCTGCTGTCCCTTAGCAGAGGGCGGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCACCACCTTCTGCAAGTaGGCCCACAGTGTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVTTFCK*AHSVQC
Trigger: ACACTGAACACTGTGGGCCAACTTGCAGAAGGTGGT...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGACTAAGCCAGCAACTTaGCTTCGTTCTGGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLTKPAT*LRSGKR
Trigger: CCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAGT...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGGAGCGACGGCCTGCTTaGGGGGAGTTCCCGGGACGT +
Preference number: 5 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERERRPA*GEFPGR
Trigger: ACGTCCCGGGAACTCCCCCAAAGCAGGCCGTCGCTC...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR CAA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGCACCTCTGTAATCTTTaGGGTGACTCTGGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLHLCNL*GDSGLR
Trigger: TCTCAAACCAGAGTCACCCAAAAGATTACAGAGGTG...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TGGATCCAGGTAGCAACCGTCACAATCTGGATGGAGAAAGCTGTCGGCAGCTTGGGAACTAGTAAGATGTaGCCTTGGGCATGGATTCAA +
Preference number: 5 (lower is better)
Translates to: WIQVATVTIWMEKAVGSLGTSKM*PWAWIQ
Trigger: TTGAATCCATGCCCAAGGCAACATCTTACTAGTTCC...CAAGCTGCCGACAGCTTTCTCCATCCAGATTGTGACGGTTGCTACCTGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCAAGATCACCTCTGGTTaGAAACAGCAGTACCCCACT +
Preference number: 5 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPKITSG*KQQYPT
Trigger: AGTGGGGTACTGCTGTTTCAAACCAGAGGTGATCTT...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp AACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGGGAACCAAGTCTGCAGGACATTTTTGTaGAAGCAACAGCAGCTACAT +
Preference number: 5 (lower is better)
Translates to: NSCFSEGVDLVPLSGNQVCRTFL*KQQQLH
Trigger: ATGTAGCTGCTGTTGCTTCAACAAAAATGTCCTGCA...GACTTGGTTCCCTGACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp ACCTCGGTGAATCAGTTCCACCCTACAGGGTTCCTGATCCTTAATACCAAACCCTTCTATGACAGCTGTTaGAGGATCAGTGAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TSVNQFHPTGFLILNTKPFYDSC*RISEVC
Trigger: GCACACCTCACTGATCCTCAAACAGCTGTCATAGAA...GGGTTTGGTATTAAGGATCAGGAACCCTGTAGGGTGGAACTGATTCACCGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTGTGGACCTGGTACCCTaGTCAGGGAACCAAGTCAAT +
Preference number: 5 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLVDLVP*SGNQVN
Trigger: ATTGACTTGGTTCCCTGACAAGGGTACCAGGTCCAC...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGACCACCTTCTGCAAGTaGGCCCACAGTGTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KARHQACPRNDIHFVVTGTTFCK*AHSVQC
Trigger: ACACTGAACACTGTGGGCCAACTTGCAGAAGGTGGT...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGTTGGGTGACTCTGGTTaGAGAATTCCTCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: STERSDRFTLGLLMALSLLGDSG*RIPPLR
Trigger: TCTCAGAGGAGGAATTCTCAAACCAGAGTCACCCAA...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACTTGGGTGACTCTGGTTaGAGAATTCCTCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYLGDSG*RIPPLR
Trigger: TCTCAGAGGAGGAATTCTCAAACCAGAGTCACCCAA...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAAAGGGCTGCCCCCTTTaGCCAGAAGTTTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPKGCPL*PEVSTH
Trigger: GTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCTT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTAGTAACCTCTATGAATaGAGGGCTCTACTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCSNLYE*RALLSQ
Trigger: CTGGCTTAGTAGAGCCCTCAATTCATAGAGGTTACT...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTGACCATGGTCTCCAGTaGGTGATGTATTGTATGGAA +
Preference number: 5 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCDHGLQ*VMYCME
Trigger: TTCCATACAATACATCACCAACTGGAGACCATGGTC...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAAGCTTGCTCCAAAGTTaGAAACTTTGGATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGSLLQS*KLWMLG
Trigger: CCCAAGCATCCAAAGTTTCAAACTTTGGAGCAAGCT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGAGCTTGCTCCAAAGTTaGAAACTTTGGATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: STERSDRFTLGLLMALSLSLLQS*KLWMLG
Trigger: CCCAAGCATCCAAAGTTTCAAACTTTGGAGCAAGCT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTCAGAAGAGGAGAATTTaGCTGCGTGTATTCATTCAG +
Preference number: 5 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCQKRRI*LRVFIQ
Trigger: CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTG...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TACTGTAAAAGTACCATGTACTTTTACCATGTCACCCAGTGTCACATGGGTGATAAGGGCTGCCCCCTTTaGCCAGAAGTTTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: YCKSTMYFYHVTQCHMGDKGCPL*PEVSTH
Trigger: GTGGGTTGAAACTTCTGGCAAAAGGGGGCAGCCCTT...ATCACCCATGTGACACTGGGTGACATGGTAAAAGTACATGGTACTTTTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTAGTGACCGCTTCACTTaGGGTTTGTTAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCSDRFT*GLLMAL
Trigger: CAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACATTATGGGCATCTACTaGAGCAACCCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYIMGIY*SNPDGC
Trigger: ACAACCATCTGGGTTGCTCAAGTAGATGCCCATAAT...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATACCCAGTCATGGGGCTTaGCCACCTGGCCTCCCAATG +
Preference number: 5 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIPSHGA*PPGLPM
Trigger: CATTGGGAGGCCAGGTGGCAAAGCCCCATGACTGGG...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGCGGGCTGTACGCGCTTaGTGGCAGGTTCATGGTCAA +
Preference number: 5 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKRAVRA*WQVHGQ
Trigger: TTGACCATGAACCTGCCACAAAGCGCGTACAGCCCG...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS-3UTR CAA 90 bp TCCACTGAGAGGAGTGACCGCTTCACTTTGGGTTTGTTAATGGCACTGAGTTTGATTTTCTTGTTCTGCTaGATCAGGTCATCACCTCTG +
Preference number: 5 (lower is better)
Translates to: STERSDRFTLGLLMALSLIFLFC*IRSSPL
Trigger: CAGAGGTGATGACCTGATCAAGCAGAACAAGAAAAT...CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACTCCTCTCAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCCTTGTTATATTCCTCCACAGTaGACTTCTCAAAGGATTTCC +
Preference number: 5 (lower is better)
Translates to: PKSKLTAAFQKGWTWYPCYIPPQ*TSQRIS
Trigger: GGAAATCCTTTGAGAAGTCAACTGTGGAGGAATATA...ACAAGGGTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGGGGTGGACCTGGTACCAGAAGAGGAGAATTTaGCTGCGTGTATTCATTCAG +
Preference number: 5 (lower is better)
Translates to: KEPKSKLTAAFQKGWTWYQKRRI*LRVFIQ
Trigger: CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTG...GTACCAGGTCCACCCCTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGGGTGCCAATGGCCTTaGGAGCCAGGGAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNGCQWP*EPGKTP
Trigger: AGGAGTTTTCCCTGGCTCCAAAGGCCATTGGCACCC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTGGAACTAGTAAGATGTaGCCTTGGGCATGGATTCAA +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCGTSKM*PWAWIQ
Trigger: TTGAATCCATGCCCAAGGCAACATCTTACTAGTTCC...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTACTAAGCCAGCAACTTaGCTTCGTTCTGGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPTKPAT*LRSGKR
Trigger: CCTCTTTCCAGAACGAAGCAAAGTTGCTGGCTTAGT...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTTCTATCTTTATTAGCTaGAAGGCCCTTAGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLSIFIS*KALSGW
Trigger: CCACCCACTAAGGGCCTTCAAGCTAATAAAGATAGA...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTAAGAAGTGCCGCTGGTaGGGCAAATCAAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFKKCRW*GKSRPA
Trigger: AGCAGGTCTTGATTTGCCCAACCAGCGGCACTTCTT...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTCACCTCTGTAATCTTTaGGGTGACTCTGGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPHLCNL*GDSGLR
Trigger: TCTCAAACCAGAGTCACCCAAAAGATTACAGAGGTG...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTATTTTCTTGTTCTGCTaGATCAGGTCATCACCTCTG +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCIFLFC*IRSSPL
Trigger: CAGAGGTGATGACCTGATCAAGCAGAACAAGAAAAT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTGCCTGTCTGAATTCTTaGATACACTCTGAAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPACLNS*IHSEGC
Trigger: GCAACCTTCAGAGTGTATCAAAGAATTCAGACAGGC...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTGGATGAAAAGGAGATaGGGAAATCTGGACTATGTG +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCWMKRR*GNLDYV
Trigger: CACATAGTCCAGATTTCCCAATCTCCTTTTCATCCA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAAGTAACCTCTATGAATaGAGGGCTCTACTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: HPSARVKDHELLRRSTRQSNLYE*RALLSQ
Trigger: CTGGCTTAGTAGAGCCCTCAATTCATAGAGGTTACT...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GAGAGAGACTTGAAGCCCAAAATGATCAGAGCTGTTGGACCTCAGAGGTATCTTTTAATGGCACTGAGTTaGAACACACACAGGATCCTA +
Preference number: 5 (lower is better)
Translates to: ERDLKPKMIRAVGPQRYLLMALS*NTHRIL
Trigger: TAGGATCCTGTGTGTGTTCAAACTCAGTGCCATTAA...AAGATACCTCTGAGGTCCAACAGCTCTGATCATTTTGGGCTTCAAGTCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTGCAGGACATTTTTGTaGAAGCAACAGCAGCTACAT +
Preference number: 5 (lower is better)
Translates to: LVPCHIKARHQACPRNDICRTFL*KQQQLH
Trigger: ATGTAGCTGCTGTTGCTTCAACAAAAATGTCCTGCA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAAAAGGATTTCCCACATaGATTAAGATGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGKGFPT*IKMQVF
Trigger: AAACACCTGCATCTTAATCAATGTGGGAAATCCTTT...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTTATATTCCTCCACAGTaGACTTCTCAAAGGATTTCC +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCYIPPQ*TSQRIS
Trigger: GGAAATCCTTTGAGAAGTCAACTGTGGAGGAATATA...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTATAGGGTTTCATCATaGAGTGACTTCTTCGGCGAA +
Preference number: 5 (lower is better)
Translates to: KARHQACPRNDIHFVVTGYRVSS*SDFFGE
Trigger: TTCGCCGAAGAAGTCACTCAATGATGAAACCCTATA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGGCCTGTCTGAATTCTTaGATACACTCTGAAGGTTGC +
Preference number: 5 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQACLNS*IHSEGC
Trigger: GCAACCTTCAGAGTGTATCAAAGAATTCAGACAGGC...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGCCTTTGGAGCCAGGGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGATGGAGTAAAATGAAATaGGTGCTGGTGAAGAGATTA +
Preference number: 5 (lower is better)
Translates to: GLWSQGKLLKADIAGVYGWSKMK*VLVKRL
Trigger: TAATCTCTTCACCAGCACCAATTTCATTTTACTCCA...TCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCCCTGGCTCCAAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAAACTCCTTAAAGCAGATATAGCTGGGGTATATGGAGGTGTCAGGAGGTGTATGCCAGAAATGCTCTaGCAATTTCAGGCCATTATT +
Preference number: 5 (lower is better)
Translates to: GKLLKADIAGVYGGVRRCMPEML*QFQAII
Trigger: AATAATGGCCTGAAATTGCAAGAGCATTTCTGGCAT...ACACCTCCTGACACCTCCATATACCCCAGCTATATCTGCTTTAAGGAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAATCCAAGAATTCCAAGTaGATGTTTGAAACCACGGGT +
Preference number: 5 (lower is better)
Translates to: HPSARVKDHELLRRSTRQSKNSK*MFETTG
Trigger: ACCCGTGGTTTCAAACATCAACTTGGAATTCTTGGA...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATGTGGACCTGGTACCCTaGTCAGGGAACCAAGTCAAT +
Preference number: 5 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNVDLVP*SGNQVN
Trigger: ATTGACTTGGTTCCCTGACAAGGGTACCAGGTCCAC...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTAGACAGCTACTACTATaGCCTATACAGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPRQLLL*PIQLTY
Trigger: GTATGTCAGCTGTATAGGCAATAGTAGTAGCTGTCT...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGAGGTGATACATTATTTCCCTTCTAAGAGACAGCTACTACTATTGCCTATAAAGAAGTGCCGCTGGTaGGGCAAATCAAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: KEVIHYFPSKRQLLLLPIKKCRW*GKSRPA
Trigger: AGCAGGTCTTGATTTGCCCAACCAGCGGCACTTCTT...TATAGGCAATAGTAGTAGCTGTCTCTTAGAAGGGAAATAATGTATCACCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGATTTGCAGGACATTTTaGTTGAAGCAACAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: KARHQACPRNDIHFVVTGICRTF*LKQQQL
Trigger: TAGCTGCTGTTGCTTCAACAAAAATGTCCTGCAAAT...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTTTCTATGACAGCTGTTaGAGGATCAGTGAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFFYDSC*RISEVC
Trigger: GCACACCTCACTGATCCTCAAACAGCTGTCATAGAA...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCATGGATGAAAAGGAGATaGGGAAATCTGGACTATGTG +
Preference number: 5 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPWMKRR*GNLDYV
Trigger: CACATAGTCCAGATTTCCCAATCTCCTTTTCATCCA...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCAAGACAGCTACTACTATaGCCTATACAGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPRQLLL*PIQLTY
Trigger: GTATGTCAGCTGTATAGGCAATAGTAGTAGCTGTCT...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGCCTTATGCTCTCCTATaGTCAATGCATTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: KARHQACPRNDIHFVVTGPYALL*SMHFLG
Trigger: ACCAAGAAAATGCATTGACAATAGGAGAGCATAAGG...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGCCAGTTGGTGATGTATaGTATGGAAAGGTATCCTGT +
Preference number: 5 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQPVGDV*YGKVSC
Trigger: ACAGGATACCTTTCCATACAATACATCACCAACTGG...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp AAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCCATTTTGTTGTGACAGGGTCCAAGTGTTTGTCTTaGATTTTCTTGTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: KARHQACPRNDIHFVVTGSKCLS*IFLFCL
Trigger: CAAGCAGAACAAGAAAATCAAAGACAAACACTTGGA...CCCTGTCACAACAAAATGGATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CTTGTACCATGCCACATTAAAGCACGGCACCAAGCTTGTCCTAGAAATGATATCTCCAAGTGTTTGTCTTaGATTTTCTTGTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LVPCHIKARHQACPRNDISKCLS*IFLFCL
Trigger: CAAGCAGAACAAGAAAATCAAAGACAAACACTTGGA...GATATCATTTCTAGGACAAGCTTGGTGCCGTGCTTTAATGTGGCATGGTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCAACTGGGAAAGACACAGAAGAGGAGAATTTTGCTGCGTGTATTCATTCAGATTTGCAGGACATTTTaGTTGAAGCAACAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: VQLGKTQKRRILLRVFIQICRTF*LKQQQL
Trigger: TAGCTGCTGTTGCTTCAACAAAAATGTCCTGCAAAT...CTGAATGAATACACGCAGCAAAATTCTCCTCTTCTGTGTCTTTCCCAGTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TCACAAAGACCAACCTGGATGAAAAGGAGATTGGGAAATCTGGACTATGTGCCTAAAGGATTTCCCACATaGATTAAGATGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SQRPTWMKRRLGNLDYVPKGFPT*IKMQVF
Trigger: AAACACCTGCATCTTAATCAATGTGGGAAATCCTTT...AGGCACATAGTCCAGATTTCCCAATCTCCTTTTCATCCAGGTTGGTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp CATCCATCTGCTAGAGTAAAAGACCATGAGTTGCTAAGGAGATCAACCAGGCAAACAGACTTCTTTATCTaGTACCATGCCACATTAAAG +
Preference number: 5 (lower is better)
Translates to: HPSARVKDHELLRRSTRQTDFFI*YHATLK
Trigger: CTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGT...TTGCCTGGTTGATCTCCTTAGCAACTCATGGTCTTTTACTCTAGCAGATGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGACGCTTCACTTTGGGTTaGTTAATGGCACTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: CIHCGYARLRNDSITLMGRFTLG*LMALSL
Trigger: CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCG...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TGTATACACTGTGGATATGCTAGACTAAGGAATGATTCAATAACCCTCATGGGAATTATGGGCATCTACTaGAGCAACCCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: CIHCGYARLRNDSITLMGIMGIY*SNPDGC
Trigger: ACAACCATCTGGGTTGCTCAAGTAGATGCCCATAAT...TCCCATGAGGGTTATTGAATCATTCCTTAGTCTAGCATATCCACAGTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS TCA 90 bp GTTCTGTCATTACTTACCAATGGGTTCTCTTCTATGACAGCTGTTTaGGGATCAGTGAGGTGTGCCTTTCTGTTGAAATTATTTCCACTT +
Preference number: 5 (lower is better)
Translates to: VLSLLTNGFSSMTAV*GSVRCAFLLKLFPL
Trigger: AAGTGGAAATAATTTCAACAGAAAGGCACACCTCACTGATCCTCAAACAGCTGTCATAGAAGAGAACCCATTGGTAAGTAATGACAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTATAGGGTTTCATCATaGAGTGACTTCTTCGGCGAA +
Preference number: 5 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERYRVSS*SDFFGE
Trigger: TTCGCCGAAGAAGTCACTCAATGATGAAACCCTATA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGATGTGATATACATCATGGACATCCACATCTTAGTAGCCAGTCACAAAGACCATGGAGTAAAATGAAATaGGTGCTGGTGAAGAGATTA +
Preference number: 5 (lower is better)
Translates to: GCDIHHGHPHLSSQSQRPWSKMK*VLVKRL
Trigger: TAATCTCTTCACCAGCACCAATTTCATTTTACTCCA...TGGTCTTTGTGACTGGCTACTAAGATGTGGATGTCCATGATGTATATCACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTTCCAAGAATTCCAAGTaGATGTTTGAAACCACGGGT +
Preference number: 5 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFSKNSK*MFETTG
Trigger: ACCCGTGGTTTCAAACATCAACTTGGAATTCTTGGA...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGTTAATGGCACTGAGTTaGAACACACACAGGATCCTA +
Preference number: 5 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERLMALS*NTHRIL
Trigger: TAGGATCCTGTGTGTGTTCAAACTCAGTGCCATTAA...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATCGCTTCACTTTGGGTTaGTTAATGGCACTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNRFTLG*LMALSL
Trigger: CAAACTCAGTGCCATTAACAAACCCAAAGTGAAGCG...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAAGTGACCGCTTCACTTaGGGTTTGTTAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLSDRFT*GLLMAL
Trigger: CAGTGCCATTAACAAACCCAAAGTGAAGCGGTCACT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GGAAGAGATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTTCCCATGAGTTGCATTaGCAGGACATTTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRDIQCVKEPKSKLTAAFSHELH*QDIFVE
Trigger: TTCAACAAAAATGTCCTGCAAATGCAACTCATGGGA...AAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATCTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GATATCCAATGTGTAAAAGAGCCCAAGAGTAAACTAACAGCTGCTTTTCAGAAGTGCTCAGATTTCAGTTaGATAACTGTACCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: DIQCVKEPKSKLTAAFQKCSDFS*ITVPSA
Trigger: TGCTGAAGGTACAGTTATCAAACTGAAATCTGAGCA...CTTCTGAAAAGCAGCTGTTAGTTTACTCTTGGGCTCTTTTACACATTGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATTCCCATGAGTTGCATTaGCAGGACATTTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNSHELH*QDIFVE
Trigger: TTCAACAAAAATGTCCTGCAAATGCAACTCATGGGA...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp TTGGACACAATTCTTCCTGCATTCATCTTCATCTGGTTTCTTTCCTATGTGAATATGCCAGAAATGCTCTaGCAATTTCAGGCCATTATT +
Preference number: 5 (lower is better)
Translates to: LDTILPAFIFIWFLSYVNMPEML*QFQAII
Trigger: AATAATGGCCTGAAATTGCAAGAGCATTTCTGGCAT...ATTCACATAGGAAAGAAACCAGATGAAGATGAATGCAGGAAGAATTGTGTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS-3UTR CAA 90 bp GTTCATGCAAAGCCCTGTATCAGGTGGTACTATCAATTTCATTACATTGAAAGGGACTGCTTCATGTGTTaGAGATACACTGTGAATAAA +
Preference number: 5 (lower is better)
Translates to: VHAKPCIRWYYQFHYIERDCFMC*RYTVNK
Trigger: TTTATTCACAGTGTATCTCAAACACATGAAGCAGTC...CCTTTCAATGTAATGAAATTGATAGTACCACCTGATACAGGGCTTTGCATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223428.9
CDS-3UTR CAA 90 bp AATGGAATAATTACAACAACATGCCAGAAATGCTCTTGCAATTTCAGGCCATTAACAGACTTCTTTATCTaGTACCATGCCACATTAAAG +
Preference number: 5 (lower is better)
Translates to: NGIITTTCQKCSCNFRPLTDFFI*YHATLK
Trigger: CTTTAATGTGGCATGGTACAAGATAAAGAAGTCTGT...TAATGGCCTGAAATTGCAAGAGCATTTCTGGCATGTTGTTGTAATTATTCCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS CAA 72 bp CCGGGCCGGCCGAGGCACAGGGAGCGACGGCCTGCTTaGGGGGAGTTCCCGGGACGTCGCGTTCCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: PGRPRHRERRPA*GEFPGRRVPAP
Trigger: GGGGGCGGGAACGCGACGTCCCGGGAACTCCCCCAAAGCAGGCCGTCGCTCCCTGTGCCTCGGCCGGCCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS GCA 72 bp GGTCCCGGGCCGGCCGAGGCACAGGGAGCGACGGCCTaGTTTGGGGGAGTTCCCGGGACGTCGCGTTCCCGC +
Preference number: 6 (lower is better)
Translates to: GPGPAEAQGATA*FGGVPGTSRSR
Trigger: GCGGGAACGCGACGTCCCGGGAACTCCCCCAAAGCAGGCCGTCGCTCCCTGTGCCTCGGCCGGCCCGGGACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CCA 72 bp CGGGCCGGCCGAGGCACAGGGAGCGACGGCCTGCTTTaGGGGAGTTCCCGGGACGTCGCGTTCCCGCCCCCT +
Preference number: 6 (lower is better)
Translates to: RAGRGTGSDGLL*GSSRDVAFPPP
Trigger: AGGGGGCGGGAACGCGACGTCCCGGGAACTCCCCCAAAGCAGGCCGTCGCTCCCTGTGCCTCGGCCGGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS GCA 72 bp CTCCTGAAGCCAGCACCGCGTTTTCCGACGCCTGGCTaGATTCTGGCGCCCATACCTCGGCCCGCACCGAGC +
Preference number: 6 (lower is better)
Translates to: LLKPAPRFPTPG*ILAPIPRPAPS
Trigger: GCTCGGTGCGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CCA 72 bp TCCCCTCCTGAAGCCAGCACCGCGTTTTCCGACGCCTaGCTGCATTCTGGCGCCCATACCTCGGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: SPPEASTAFSDA*LHSGAHTSART
Trigger: GGTGCGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CCA 72 bp AGCCAGCACCGCGTTTTCCGACGCCTGGCTGCATTCTaGCGCCCATACCTCGGCCCGCACCGAGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: SQHRVFRRLAAF*RPYLGPHRASS
Trigger: GGAAGATGCTCGGTGCGGGCCGAGGTATGGGCGCCAGAATGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CAA 72 bp CGGCCTCTCACCGCAGACCCACGGGCTGTACGCGCTTaGTGGCAGGTTCATGGTCAATACAATAAACGCGCA +
Preference number: 6 (lower is better)
Translates to: RPLTADPRAVRA*WQVHGQYNKRA
Trigger: TGCGCGTTTATTGTATTGACCATGAACCTGCCACAAAGCGCGTACAGCCCGTGGGTCTGCGGTGAGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS TCA 72 bp GACATCACCAAGTCTGGTGCTCTCTGGGCAAGGGGATaGAGAAGTGCCGCTGGTTGGGCAAATCAAGACCTG +
Preference number: 6 (lower is better)
Translates to: DITKSGALWARG*RSAAGWANQDL
Trigger: CAGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCATCCCCTTGCCCAGAGAGCACCAGACTTGGTGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223428.9
ENST00000374641.3
ENST00000375231.5
CDS TCA 72 bp GTTCATGGTCAATACAATAAACGCGCATTCCCCTCCTaGAGCCAGCACCGCGTTTTCCGACGCCTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: VHGQYNKRAFPS*SQHRVFRRLAA
Trigger: TGCAGCCAGGCGTCGGAAAACGCGGTGCTGGCTTCAGGAGGGGAATGCGCGTTTATTGTATTGACCATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CCA 72 bp CCTCTCACCGCAGACCCACGGGCTGTACGCGCTTTGTaGCAGGTTCATGGTCAATACAATAAACGCGCATTC +
Preference number: 6 (lower is better)
Translates to: PLTADPRAVRAL*QVHGQYNKRAF
Trigger: GAATGCGCGTTTATTGTATTGACCATGAACCTGCCACAAAGCGCGTACAGCCCGTGGGTCTGCGGTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375231.5
CDS CAA 72 bp TGCTCTCTGGGCAAGGGGATGAAGAAGTGCCGCTGGTaGGGCAAATCAAGACCTGCTCCTTTCTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: CSLGKGMKKCRW*GKSRPAPFWVL
Trigger: AAGAACCCAGAAAGGAGCAGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCATCCCCTTGCCCAGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223428.9
ENST00000374641.3
ENST00000375231.5
CDS GCA 72 bp GATGAAGAAGTGCCGCTGGTTGGGCAAATCAAGACCTaGTCCTTTCTGGGTTCTTCTGCATCTGTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: DEEVPLVGQIKT*SFLGSSASVWK
Trigger: CTTCCAAACAGATGCAGAAGAACCCAGAAAGGAGCAGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223428.9
ENST00000374641.3
ENST00000375231.5
CDS CAA 90 bp TGTTCTGTCATTACTTACCAATGGGTTCTCTTCTATGACAGCTGTTaGAGGATCAGTGAGGTGTGCCTTTCTGTTGAAATTATTTCCACT +
Preference number: 6 (lower is better)
Translates to: CSVITYQWVLFYDSC*RISEVCLSVEIIST
Trigger: AGTGGAAATAATTTCAACAGAAAGGCACACCTCACTGATCCTCAAACAGCTGTCATAGAAGAGAACCCATTGGTAAGTAATGACAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS CAA 72 bp ATTACTTACCAATGGGTTCTCTTCTATGACAGCTGTTaGAGGATCAGTGAGGTGTGCCTTTCTGTTGAAATT +
Preference number: 6 (lower is better)
Translates to: ITYQWVLFYDSC*RISEVCLSVEI
Trigger: AATTTCAACAGAAAGGCACACCTCACTGATCCTCAAACAGCTGTCATAGAAGAGAACCCATTGGTAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5
CDS CAA 90 bp ATAAATTCAGAAATACTTTGCAAATTCACTTCCCATGAGTTGCATTaGCAGGACATTTTTGTTGAAGCAACAGCAGCTACATGCAGAGTA +
Preference number: 6 (lower is better)
Translates to: INSEILCKFTSHELH*QDIFVEATAATCRV
Trigger: TACTCTGCATGTAGCTGCTGTTGCTTCAACAAAAATGTCCTGCAAATGCAACTCATGGGAAGTGAATTTGCAAAGTATTTCTGAATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223428.9
ENST00000375231.5