RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF507 (Homo sapiens)

Ensembl gene IDs: ENSG00000168813

Ensembl transcript IDs: ENST00000311921.8, ENST00000355898.6, ENST00000544431.5, ENST00000586664.1, ENST00000587084.5

Found 655 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTaGCCTTGGTCACTTTCAACTGAGGTGACCCAGGATTCTAGGGCA +
Preference number: 1 (lower is better)
Translates to: GDMIMLSLGSMGRNI*PWSLSTEVTQDSRA
Trigger: TGCCCTAGAATCCTGGGTCACCTCAGTTGAAAGTGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR TCA 90 bp GAAGCATGGGACGAAATATTTGGCCTTGGTCACTTTCAACTGAGGTaGCCCAGGATTCTAGGGCACAAATGGATAACCAGACCCACGATA +
Preference number: 1 (lower is better)
Translates to: EAWDEIFGLGHFQLR*PRILGHKWITRPTI
Trigger: TATCGTGGGTCTGGTTATCCATTTGTGCCCTAGAATCCTGGGTCACCTCAGTTGAAAGTGACCAAGGCCAAATATTTCGTCCCATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR TCA 90 bp CCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACTGTGGTGAAGGAATCCTCTTCTACT +
Preference number: 1 (lower is better)
Translates to: PQKSHQRLLLWQEVV*QRKGETVVKESSST
Trigger: AGTAGAAGAGGATTCCTTCACCACAGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 90 bp AGGAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTaGACTATCTGGCCAAAGAACTTGGACTACCGATCAAATGGAATA +
Preference number: 1 (lower is better)
Translates to: RKKDPEQRLRSVSQH*TIWPKNLDYRSNGI
Trigger: TATTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 90 bp TCTGAGAACACGGAAGACGATTTAGCATTACTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAATTCACCTGTTTCGTCCTCTGCTCAC +
Preference number: 1 (lower is better)
Translates to: SENTEDDLALLRIEI*FESGENSPVSSSAH
Trigger: GTGAGCAGAGGACGAAACAGGTGAATTCTCACCAGACTCAAACCAGATCTCAATTCGTAGTAATGCTAAATCGTCTTCCGTGTTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CCA 90 bp ACAACATTGCACTATCTGGCCAAAGAACTTGGACTACCGATCAAATaGAATATTAGCATGATACTGTTGAACACTGGGACACCCGCCATA +
Preference number: 1 (lower is better)
Translates to: TTLHYLAKELGLPIK*NISMILLNTGTPAI
Trigger: TATGGCGGGTGTCCCAGTGTTCAACAGTATCATGCTAATATTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR TCA 90 bp GTTAGTGACACAGTTTCAGATTGGGTTTTTCAAAGACAGGGGATATaGTTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTT +
Preference number: 1 (lower is better)
Translates to: VSDTVSDWVFQRQGI*LCCPWEAWDEIFGL
Trigger: AAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATCCCCTGTCTTTGAAAAACCCAATCTGAAACTGTGTCACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 90 bp TATTATAGTGGCTGCCACACTGGACCATACGTTCTAGAGCTTCCATaGTCGGATTCTTTAATTTGGAGGTTAGTGACACAGTTTCAGATT +
Preference number: 1 (lower is better)
Translates to: YYSGCHTGPYVLELP*SDSLIWRLVTQFQI
Trigger: AATCTGAAACTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGTGTGGCAGCCACTATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 90 bp GTCTTTGCAACTGCTATGTATTTTACACTTAGATATTATAGTGGCTaGCACACTGGACCATACGTTCTAGAGCTTCCATGCTCGGATTCT +
Preference number: 1 (lower is better)
Translates to: VFATAMYFTLRYYSG*HTGPYVLELPCSDS
Trigger: AGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAGCAGTTGCAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 90 bp ACTGGACCATACGTTCTAGAGCTTCCATGCTCGGATTCTTTAATTTaGAGGTTAGTGACACAGTTTCAGATTGGGTTTTTCAAAGACAGG +
Preference number: 1 (lower is better)
Translates to: TGPYVLELPCSDSLI*RLVTQFQIGFFKDR
Trigger: CCTGTCTTTGAAAAACCCAATCTGAAACTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 90 bp TTGCCACAAAATGATAATGGGAAGGGAAAGAACCTCCTTGATATATaGTTCCTCCTATCGGCCAGGAGAAAGCTTTTAAGGACAATTCTA +
Preference number: 1 (lower is better)
Translates to: LPQNDNGKGKNLLDI*FLLSARRKLLRTIL
Trigger: TAGAATTGTCCTTAAAAGCTTTCTCCTGGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATTTTGTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 90 bp ATCCAATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTaGCTACAGCGTATCCCATTCGAAAACCTTTACAGTGTTCCAAGT +
Preference number: 1 (lower is better)
Translates to: IQSYLDFRNRILLKT*LQRIPFENLYSVPS
Trigger: ACTTGGAACACTGTAAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR TCA 90 bp AATATGTCAATAGCTGTCTGTATAGACGACAGAGTGATCAAGGTGTaGACATATCACTGTAGTTTTTGGCCTTCACTAAGGAATGCTAAT +
Preference number: 1 (lower is better)
Translates to: NMSIAVCIDDRVIKV*TYHCSFWPSLRNAN
Trigger: ATTAGCATTCCTTAGTGAAGGCCAAAAACTACAGTGATATGTTCACACCTTGATCACTCTGTCGTCTATACAGACAGCTATTGACATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR TCA 90 bp TCTAATAAGCTTTTATTAATAAATACACTCGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGATTACACCTCTACTTCCTCTTTGAC +
Preference number: 1 (lower is better)
Translates to: SNKLLLINTLDTKKG*QRVNTGLHLYFLFD
Trigger: GTCAAAGAGGAAGTAGAGGTGTAATCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTCGAGTGTATTTATTAATAAAAGCTTATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACACCCCCTCCCAGAACTaGCTCCCATTTCTCACTGGA +
Preference number: 2 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHTPSQN*LPFLTG
Trigger: TCCAGTGAGAAATGGGAGGCAGTTCTGGGAGGGGGT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGGAATCCTCTTCTACTaGTTTCCTGCTCGAGTCATT +
Preference number: 2 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHGILFY*FPARVI
Trigger: AATGACTCGAGCAGGAAAGCAGTAGAAGAGGATTCC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGATCTGTCACCCCGGTTaGAGTGCAATGGTGCCATCA +
Preference number: 2 (lower is better)
Translates to: EERSRTKASVGVTTLHYLICHPG*SAMVPS
Trigger: TGATGGCACCATTGCACTCCAACCGGGGTGACAGAT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTACAGTGTTCCAAGTTaGTCGGTCACAGCCTCATCC +
Preference number: 2 (lower is better)
Translates to: EERSRTKASVGVTTLHYLYSVPS*SVTASS
Trigger: GGATGAGGCTGTGACCGATCAACTTGGAACACTGTA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSPPISH*RPHSLH
Trigger: ATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGA +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSADTKKG*QRVNTG
Trigger: TCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAACCTCCTTGATATATaGTTCCTCCTATCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSNLLDI*FLLSAR
Trigger: CCTGGCCGATAGGAGGAAGCATATATCAAGGAGGTT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFPPISH*RPHSLH
Trigger: ATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAACCTCCCAAGTAGCTaGTGCTACAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: LCILHLDIIVAATLDHTFNLPSS*CYRHVP
Trigger: TGGCACGTGCCTGTAGCACCAGCTACTTGGGAGGTT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCGGAAATAGCACCGTaGGGATGGTGCACAGAAGAG +
Preference number: 2 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSEIAP*GWCTEE
Trigger: CTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATCGGTGTCACAACATTaGACTATCTGGCCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSSVSQH*TIWPKN
Trigger: GTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: LCILHLDIIVAATLDHTFPPISH*RPHSLH
Trigger: ATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGATGTTGCAAGATGCCTaGCCCCACTTAAATAATTCC +
Preference number: 2 (lower is better)
Translates to: EERSRTKASVGVTTLHYLMLQDA*PHLNNS
Trigger: GGAATTATTTAAGTGGGGCCAGGCATCTTGCAACAT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 90 bp CACAGTTTCAGATTGGGTTTTTCAAAGACAGGGGATATGATTATGTaGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACTT +
Preference number: 2 (lower is better)
Translates to: HSFRLGFSKTGDMIM*SLGSMGRNIWPWSL
Trigger: AAGTGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATCCCCTGTCTTTGAAAAACCCAATCTGAAACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAGTTCTGACAGACACTaGAAAGAACCTCTGAGAACA +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSSSDRH*KEPLRT
Trigger: TGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: EERSRTKASVGVTTLHYLLRIEI*FESGEN
Trigger: ATTCTCACCAGACTCAAACCAGATCTCAATTCGTAG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATGTTGCAAGATGCCTaGCCCCACTTAAATAATTCC +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAMLQDA*PHLNNS
Trigger: GGAATTATTTAAGTGGGGCCAGGCATCTTGCAACAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CAA 90 bp CACTGGACCATACGTTCTAGAGCTTCCATGCTCGGATTCTTTAATTaGGAGGTTAGTGACACAGTTTCAGATTGGGTTTTTCAAAGACAG +
Preference number: 2 (lower is better)
Translates to: HWTIRSRASMLGFFN*EVSDTVSDWVFQRQ
Trigger: CTGTCTTTGAAAAACCCAATCTGAAACTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACT +
Preference number: 2 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVWQEVV*QRKGET
Trigger: AGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACT +
Preference number: 2 (lower is better)
Translates to: LCILHLDIIVAATLDHTFWQEVV*QRKGET
Trigger: AGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACTCACAGTCTGCATTTaGCAAGTGAGAAGAAAACTA +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSLTVCI*QVRRKL
Trigger: TAGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCTCACAGTCTGCATTTaGCAAGTGAGAAGAAAACTA +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSALTVCI*QVRRKL
Trigger: TAGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATACTTCTTAAAACGTaGCTACAGCGTATCCCATTC +
Preference number: 2 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSILLKT*LQRIPF
Trigger: GAATGGGATACGCTGTAGGCACGTTTTAAGAAGTAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATACTTCTTAAAACGTaGCTACAGCGTATCCCATTC +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAILLKT*LQRIPF
Trigger: GAATGGGATACGCTGTAGGCACGTTTTAAGAAGTAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAAGGTCTACGTACTATaGAGAAAGTATGCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAKVYVL*RKYAKF
Trigger: GAACTTGGCATACTTTCTCCATAGTACGTAGACCTT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CAA 90 bp AAAGAACTTGGACTACCGATCAAATGGAATATTAGCATGATACTGTaGAACACTGGGACACCCGCCATATTCTGGATGATTAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: KELGLPIKWNISMIL*NTGTPAIFWMIRER
Trigger: CCTTTCTCTAATCATCCAGAATATGGCGGGTGTCCCAGTGTTCAACAGTATCATGCTAATATTCCATTTGATCGGTAGTCCAAGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACT +
Preference number: 2 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVWQEVV*QRKGET
Trigger: AGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 2 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAAGGCCAGAATCAGATaGAACTTTAAAGGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAKARIR*NFKGFE
Trigger: TTCAAAGCCTTTAAAGTTTCATCTGATTCTGGCCTT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGGAATCCTCTTCTACTaGTTTCCTGCTCGAGTCATT +
Preference number: 2 (lower is better)
Translates to: LCILHLDIIVAATLDHTFGILFY*FPARVI
Trigger: AATGACTCGAGCAGGAAAGCAGTAGAAGAGGATTCC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACCCTTTCTTAACTCTTaGTGGCATTTCTACACTCTA +
Preference number: 2 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPPFLNS*WHFYTL
Trigger: TAGAGTGTAGAAATGCCAGCAAGAGTTAAGAAAGGG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTACCTGTTTCGTCCTCTaGTCACAAGAAATTCATCGT +
Preference number: 2 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFTCFVL*SQEIHR
Trigger: ACGATGAATTTCTTGTGAGCAGAGGACGAAACAGGT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAAAGGTCTACGTACTATaGAGAAAGTATGCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPKVYVL*RKYAKF
Trigger: GAACTTGGCATACTTTCTCCATAGTACGTAGACCTT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CAA 90 bp AAAACTAAAAACACAATAAGTCTCAACAGAGAAGCCTGCTTGTCTTaGTCAAGCCAATTACAGCACGGGAAGGTGCAATGTAAACATGGA +
Preference number: 2 (lower is better)
Translates to: KTKNTISLNREACLS*SSQLQHGKVQCKHG
Trigger: TCCATGTTTACATTGCACCTTCCCGTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAGACTTATTGTGTTTTTAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGA +
Preference number: 2 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPDTKKG*QRVNTG
Trigger: TCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTGGAATCCTCTTCTACTaGTTTCCTGCTCGAGTCATT +
Preference number: 2 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVGILFY*FPARVI
Trigger: AATGACTCGAGCAGGAAAGCAGTAGAAGAGGATTCC...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAACCTGTTTCGTCCTCTaGTCACAAGAAATTCATCGT +
Preference number: 2 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVTCFVL*SQEIHR
Trigger: ACGATGAATTTCTTGTGAGCAGAGGACGAAACAGGT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTACCTGTTTCGTCCTCTaGTCACAAGAAATTCATCGT +
Preference number: 2 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVTCFVL*SQEIHR
Trigger: ACGATGAATTTCTTGTGAGCAGAGGACGAAACAGGT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVLRIEI*FESGEN
Trigger: ATTCTCACCAGACTCAAACCAGATCTCAATTCGTAG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAGTTCTGACAGACACTaGAAAGAACCTCTGAGAACA +
Preference number: 2 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPSSDRH*KEPLRT
Trigger: TGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGGACTACCGATCAAATaGAATATTAGCATGATACTG +
Preference number: 2 (lower is better)
Translates to: LCILHLDIIVAATLDHTFGLPIK*NISMIL
Trigger: CAGTATCATGCTAATATTCCATTTGATCGGTAGTCC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 90 bp TCGTCAATAGCAGAACTAGTCTTTAGCACTTTGACTATATCAGAATaGAAAGCATATAAGCGTGTCACATTTGGAAGAGAAACTGAACTG +
Preference number: 2 (lower is better)
Translates to: SSIAELVFSTLTISE*KAYKRVTFGRETEL
Trigger: CAGTTCAGTTTCTCTTCCAAATGTGACACGCTTATATGCTTTCAATTCTGATATAGTCAAAGTGCTAAAGACTAGTTCTGCTATTGACGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 90 bp GGAATGCTAATTCCTTCGTCAATAGCAGAACTAGTCTTTAGCACTTaGACTATATCAGAATTGAAAGCATATAAGCGTGTCACATTTGGA +
Preference number: 2 (lower is better)
Translates to: GMLIPSSIAELVFST*TISELKAYKRVTFG
Trigger: TCCAAATGTGACACGCTTATATGCTTTCAATTCTGATATAGTCAAAGTGCTAAAGACTAGTTCTGCTATTGACGAAGGAATTAGCATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 72 bp GTAAACAGAGGACCTCATCTGTCACCCCGGTTGGAGTaGAATGGTGCCATCACGGCTCACTGCAAGCCTCTA +
Preference number: 3 (lower is better)
Translates to: VNRGPHLSPRLE*NGAITAHCKPL
Trigger: TAGAGGCTTGCAGTGAGCCGTGATGGCACCATTGCACTCCAACCGGGGTGACAGATGAGGTCCTCTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 72 bp AAAAACCCCCTCCCAGAACTGCCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCATTTGACAAGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: KNPLPELPPISH*RPHSLHLTSEK
Trigger: CTTCTCACTTGTCAAATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGGCAGTTCTGGGAGGGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAACCTCTACTTCCTCTTaGACCCACTCCCCCTCACTC +
Preference number: 3 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSTSTSS*THSPSL
Trigger: GAGTGAGGGGGAGTGGGTCAAAGAGGAAGTAGAGGT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 3 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 72 bp GATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTaGACTATCTGGCCAAAGAACTTGGACTACCGATCA +
Preference number: 3 (lower is better)
Translates to: DPEQRLRSVSQH*TIWPKNLDYRS
Trigger: TGATCGGTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 72 bp GGCTGCCACACTGGACCATACGTTCTAGAGCTTCCATaGTCGGATTCTTTAATTTGGAGGTTAGTGACACAG +
Preference number: 3 (lower is better)
Translates to: GCHTGPYVLELP*SDSLIWRLVTQ
Trigger: CTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGTGTGGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTTCTGTGGCAGGAAGTaGTCTGACAGCGTAAAGGTG +
Preference number: 3 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAFCGRK*SDSVKV
Trigger: CACCTTTACGCTGTCAGACAACTTCCTGCCACAGAA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 3 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR TCA 72 bp TCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACTGTGGTGAAGGAATCC +
Preference number: 3 (lower is better)
Translates to: SHQRLLLWQEVV*QRKGETVVKES
Trigger: GGATTCCTTCACCACAGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CCA 72 bp ATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTaGCCTTGGTCACTTTCAACTGAGGTGACCCAGGAT +
Preference number: 3 (lower is better)
Translates to: IMLSLGSMGRNI*PWSLSTEVTQD
Trigger: ATCCTGGGTCACCTCAGTTGAAAGTGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 72 bp CAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTaGCCAAAGAACTTGGACTACCGATCAAATGGAATA +
Preference number: 3 (lower is better)
Translates to: QRLRSVSQHCTI*PKNLDYRSNGI
Trigger: TATTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 3 (lower is better)
Translates to: EERSRTKASVGVTTLHYLPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATTCTGTGGCAGGAAGTaGTCTGACAGCGTAAAGGTG +
Preference number: 3 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVFCGRK*SDSVKV
Trigger: CACCTTTACGCTGTCAGACAACTTCCTGCCACAGAA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAACCTCTACTTCCTCTTaGACCCACTCCCCCTCACTC +
Preference number: 3 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPTSTSS*THSPSL
Trigger: GAGTGAGGGGGAGTGGGTCAAAGAGGAAGTAGAGGT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 3 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR TCA 72 bp AAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACCTCTGAGAACACGGAA +
Preference number: 3 (lower is better)
Translates to: KVYVLWRKYAKF*QTLKRTSENTE
Trigger: TTCCGTGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTTTCTCCATAGTACGTAGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 72 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATaGTTCCTCCTATCGGCCAGGAGAAAGCTTTTAAGG +
Preference number: 3 (lower is better)
Translates to: NDNGKGKNLLDI*FLLSARRKLLR
Trigger: CCTTAAAAGCTTTCTCCTGGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CCA 72 bp ACGGAAGACGATTTAGCATTACTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAATTCACCTGTTTCGTCC +
Preference number: 3 (lower is better)
Translates to: TEDDLALLRIEI*FESGENSPVSS
Trigger: GGACGAAACAGGTGAATTCTCACCAGACTCAAACCAGATCTCAATTCGTAGTAATGCTAAATCGTCTTCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTTCTGTGGCAGGAAGTaGTCTGACAGCGTAAAGGTG +
Preference number: 3 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVFCGRK*SDSVKV
Trigger: CACCTTTACGCTGTCAGACAACTTCCTGCCACAGAA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 3 (lower is better)
Translates to: NDNGKGKNLLDICFLLSANYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGTCGGTGTCACAACATaGCACTATCTGGCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LCILHLDIIVAATLDHTFVGVTT*HYLAKE
Trigger: TTCTTTGGCCAGATAGTGCAATGTTGTGACACCGAC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR TCA 72 bp ACAGTTTCAGATTGGGTTTTTCAAAGACAGGGGATATaGTTATGTTGTCCCTGGGAAGCATGGGACGAAATA +
Preference number: 3 (lower is better)
Translates to: TVSDWVFQRQGI*LCCPWEAWDEI
Trigger: TATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATCCCCTGTCTTTGAAAAACCCAATCTGAAACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR GCA 72 bp ACTGCTATGTATTTTACACTTAGATATTATAGTGGCTaGCACACTGGACCATACGTTCTAGAGCTTCCATGC +
Preference number: 3 (lower is better)
Translates to: TAMYFTLRYYSG*HTGPYVLELPC
Trigger: GCATGGAAGCTCTAGAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 72 bp CACTATCTGGCCAAAGAACTTGGACTACCGATCAAATaGAATATTAGCATGATACTGTTGAACACTGGGACA +
Preference number: 3 (lower is better)
Translates to: HYLAKELGLPIK*NISMILLNTGT
Trigger: TGTCCCAGTGTTCAACAGTATCATGCTAATATTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 3 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 3 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 72 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTaGCTACAGCGTATCCCATTCGAAAACCTTTACAGT +
Preference number: 3 (lower is better)
Translates to: YLDFRNRILLKT*LQRIPFENLYS
Trigger: ACTGTAAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR GCA 72 bp AAAACTAAAAACACAATAAGTCTCAACAGAGAAGCCTaGTTGTCTTTGTCAAGCCAATTACAGCACGGGAAG +
Preference number: 3 (lower is better)
Translates to: KTKNTISLNREA*LSLSSQLQHGK
Trigger: CTTCCCGTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAGACTTATTGTGTTTTTAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CCA 72 bp TACGTTCTAGAGCTTCCATGCTCGGATTCTTTAATTTaGAGGTTAGTGACACAGTTTCAGATTGGGTTTTTC +
Preference number: 3 (lower is better)
Translates to: YVLELPCSDSLI*RLVTQFQIGFF
Trigger: GAAAAACCCAATCTGAAACTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 3 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 3 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 3 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVNYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR TCA 72 bp CTTTTATTAATAAATACACTCGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGATTACACCTCTACTTC +
Preference number: 3 (lower is better)
Translates to: LLLINTLDTKKG*QRVNTGLHLYF
Trigger: GAAGTAGAGGTGTAATCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTCGAGTGTATTTATTAATAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 3 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPNYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 3 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPSNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCGGTCAGGCGGCGGCTaGTGCTTCCGCGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLRSGGG*CFREPR
Trigger: ACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCGGTCAGGCGGCGGCTaGTGCTTCCGCGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTARSGGG*CFREPR
Trigger: ACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCCTCGCCCTCGTCCTTaGCCACCTCTCTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAPRPRP*PPLSRL
Trigger: GAGCCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGTGTGTTGCAGCACTTaGACGTGGGCGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHVCCST*TWAFLP
Trigger: GGGAAGAAACGCCCACGTTCAAGTGCTGCAACACAC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAATAGCAATGACGACTaGATCGACCCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHNSNDD*IDPTRR
Trigger: GCGCCTGGTGGGGTCGATGCAGTCGTCATTGCTATT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATCCGCGAGCCTCGTTTaGCCAGCCAGGACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSASLV*PARTRP
Trigger: CGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGTCCTTCTCCGGCCTaGTGGGGCATTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHCPSPA*WGILIS
Trigger: ACTGATGAGAATGCCCCACCAGGCCGGAGAAGGACA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTCGGAAATAGCACCGTaGGGATGGTGCACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSEIAP*GWCTEE
Trigger: CTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCACTTTCAACTGAGGTaGCCCAGGATTCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHHFQLR*PRILGH
Trigger: GTGCCCTAGAATCCTGGGTCACCTCAGTTGAAAGTG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACCTCGCCCTCGTCCTTaGCCACCTCTCTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPPRPRP*PPLSRL
Trigger: GAGCCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGCCTTCCCTTCATTCTaGGCAAGAGTGTCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHAFPSF*ARVSGV
Trigger: TACCCCTGACACTCTTGCCCAGAATGAAGGGAAGGC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTCCGACACAAAGAGCTaGAGGGGCTTACGCACTGTT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSDTKS*RGLRTV
Trigger: AACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGGCTGTCTCTGTCGATaGACTCGTAAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHGCLCR*TRKCCL
Trigger: CAAGCAGCACTTACGAGTCCATCGACAGAGACAGCC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCTGCAAATCTGCACTTaGACTGATGGCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHLQICT*TDGPLW
Trigger: CCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCGCGAGCCTCGTTTaGCCAGCCAGGACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSASLV*PARTRP
Trigger: CGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAATCTGCACTTGCACTaGTGGCCCATTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHNLHLH*WPIVDT
Trigger: AGTATCCACAATGGGCCATCAGTGCAAGTGCAGATT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTCCAGGGTAACTGACTaGCTTAGGTGTACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSRVTD*LRCTPL
Trigger: AAGAGGAGTACACCTAAGTCAGTCAGTTACCCTGGA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCAGTGGTGGATCATGTaGCTCTCCAAATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHQWWIM*LSKSLL
Trigger: CAGCAAAGATTTGGAGAGTCACATGATCCACCACTG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHWQEVV*QRKGET
Trigger: AGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHDTKKG*QRVNTG
Trigger: TCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGCCGTACTGTTCGTATaGATACCATTTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHAVLFV*IPFPPT
Trigger: GGTAGGAGGAAATGGTATGCATACGAACAGTACGGC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGTATCGCTGTTGGGTTaGCACTGGGCGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLVSLLG*HWALSC
Trigger: GCAGGACAACGCCCAGTGCCAACCCAACAGCGATAC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGCAGTTTGGACAGTATaGGTCTGTAGATTGTCCACA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHAVWTV*VCRLST
Trigger: TGTGGACAATCTACAGACTCATACTGTCCAAACTGC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGGCGACATCATTTTTaGGTACGCTGCCAATGTACT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHWRHHF*VRCQCT
Trigger: AGTACATTGGCAGCGTACTCAAAAATGATGTCGCCA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCAAAATGTCATCGTCTaGAGCGTTTTGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHQNVIV*SVLVCP
Trigger: AGGACAGACCAAAACGCTTCAGACGATGACATTTTG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAATAGCAATGACGACTaGATCGACCCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLNSNDD*IDPTRR
Trigger: GCGCCTGGTGGGGTCGATGCAGTCGTCATTGCTATT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCCTACCCTCTGGGAGTaGTACCAAGGTGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAPTLWE*YQGGVA
Trigger: AGCAACTCCACCTTGGTAGCACTCCCAGAGGGTAGG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTCCGGAGCTCCAAAATaGCGGCGCTGGGGACGGATC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSGAPK*RRWGRI
Trigger: GATCCGTCCCCAGCGCCGCCATTTTGGAGCTCCGGA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCCTTCTCCGGCCTGGTaGGGCATTCTCATCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAPSPAW*GILISS
Trigger: GCTACTGATGAGAATGCCCCACCAGGCCGGAGAAGG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTGTCCTTCTCCGGCCTaGTGGGGCATTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLCPSPA*WGILIS
Trigger: ACTGATGAGAATGCCCCACCAGGCCGGAGAAGGACA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTTCCTGCCTACCCTCTaGGAGTGCTACCAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAFLPTL*ECYQGG
Trigger: TCCACCTTGGTAGCACTCCCAGAGGGTAGGCAGGAA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCTGTTGGGTTGGCACTaGGCGTTGTCCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTALLGWH*ALSCNS
Trigger: AGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHGLSEL*IRLWFL
Trigger: CAGAAACCACAGGCGAATCCATAACTCTGATAAGCC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACACTTCACTGGGAGTCTaGGACATCAGTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHTSLGV*DISSED
Trigger: ATCTTCAGAACTGATGTCCCAGACTCCCAGTGAAGT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGAACCTCCCAAGTAGCTaGTGCTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTANLPSS*CYRHVP
Trigger: TGGCACGTGCCTGTAGCACCAGCTACTTGGGAGGTT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTGTGTTGCAGCACTTaGACGTGGGCGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVCCST*TWAFLP
Trigger: GGGAAGAAACGCCCACGTTCAAGTGCTGCAACACAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCTTAACCTGCCCATCTaGCAATTCCTGCCTACCCTC +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTALNLPI*QFLPTL
Trigger: GAGGGTAGGCAGGAATTGTCAGATGGGCAGGTTAAG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAGTTCTGACAGACACTaGAAAGAACCTCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSSDRH*KEPLRT
Trigger: TGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAAAAACAGAAAATTATaGAGCCACCAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHKNRKL*SHQQPP
Trigger: AGGTGGCTGCTGGTGGCTTCATAATTTTCTGTTTTT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACCTACCCTCTGGGAGTaGTACCAAGGTGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSPTLWE*YQGGVA
Trigger: AGCAACTCCACCTTGGTAGCACTCCCAGAGGGTAGG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCCATCTGACAATTCCTaGCTACCCTCTGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLPSDNS*LPSGSA
Trigger: AGCACTCCCAGAGGGTAGGCAGGAATTGTCAGATGG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCCATCTGACAATTCCTaGCTACCCTCTGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAPSDNS*LPSGSA
Trigger: AGCACTCCCAGAGGGTAGGCAGGAATTGTCAGATGG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAACCCCCTCCCAGAACTaGCTCCCATTTCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSTPSQN*LPFLTG
Trigger: TCCAGTGAGAAATGGGAGGCAGTTCTGGGAGGGGGT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGCCATCACGGCTCACTaGAAGCCTCTATCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPAITAH*KPLSPR
Trigger: CCTGGGAGATAGAGGCTTGCAGTGAGCCGTGATGGC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCCAACATGGCAACACTaGTACTTTCTTCCATATCCA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHPTWQH*YFLPYP
Trigger: TGGATATGGAAGAAAGTAGCAGTGTTGCCATGTTGG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGCTTCAAGTTCCTCCTaGCTTCTAGATGTAATATGG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHASSSS*LLDVIW
Trigger: CCATATTACATCTAGAAGCCAGGAGGAACTTGAAGC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGCTTTGGATTGGGTGTaGATATTGGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHALDWV*ILASLS
Trigger: TGACAATGATGCCAATATCCACACCCAATCCAAAGC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGGGCTTACGCACTGTTaGGCTTTGGATTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSGLTHC*ALDWVW
Trigger: CCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACCTTCTCCGGCCTGGTaGGGCATTCTCATCAGTAGC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPPSPAW*GILISS
Trigger: GCTACTGATGAGAATGCCCCACCAGGCCGGAGAAGG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCATAGTGCCCCAGGTTaGCTCTTGTCAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAHSAPG*LLSTLQ
Trigger: CTGCAGAGTTGACAAGAGCCAACCTGGGGCACTATG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGTATCGCTGTTGGGTTaGCACTGGGCGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPVSLLG*HWALSC
Trigger: GCAGGACAACGCCCAGTGCCAACCCAACAGCGATAC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLPPISH*RPHSLH
Trigger: ATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCCTCCCATTTCTCACTaGAGGCCTCACAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAPPISH*RPHSLH
Trigger: ATGCAGACTGTGAGGCCTCCAGTGAGAAATGGGAGG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CAA 72 bp AGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATaGCACTATCTGGCCAAAGAACTTGGACTACCGATC +
Preference number: 4 (lower is better)
Translates to: RSRTKASVGVTT*HYLAKELGLPI
Trigger: GATCGGTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACTCGTAAGTGCTGCTTaGTGTAGCCCTTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSLVSAA*CSPCCH
Trigger: GTGGCAACAAGGGCTACATCAAGCAGCACTTACGAG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTCGTGCTCTTTCATATaGTCCAAGAGGTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHSCSFI*SKRFSL
Trigger: CAAAGAAAACCTCTTGGATCATATGAAAGAGCACGA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCTGCAAATCTGCACTTaGACTGATGGCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTALQICT*TDGPLW
Trigger: CCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCTGCACTCTCTTCACTaGTCTTTAATTGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHLHSLH*SLIESF
Trigger: GAAAGACTCAATTAAAGAGCAGTGAAGAGAGTGCAG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTTGGAGTGCAATGGTaGCATCACGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVGVQW*HHGSLQ
Trigger: TTGCAGTGAGCCGTGATGGCACCATTGCACTCCAAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGTTGGAGTGCAATGGTaGCATCACGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSVGVQW*HHGSLQ
Trigger: TTGCAGTGAGCCGTGATGGCACCATTGCACTCCAAC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTCTTCAAAATCCAGCTaGGGTCAGGCGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSSKSS*GQAAAA
Trigger: AGCAGCCGCCGCCTGACCGCAGCTGGATTTTGAAGA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTGGTCATTCACCACGTaGGCTTCAAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAWSFTT*ASSSSW
Trigger: CCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGGGCTTACGCACTGTTaGGCTTTGGATTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPGLTHC*ALDWVW
Trigger: CCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATCCGACACAAAGAGCTaGAGGGGCTTACGCACTGTT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSSDTKS*RGLRTV
Trigger: AACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCCTGCCTACCCTCTaGGAGTGCTACCAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPFLPTL*ECYQGG
Trigger: TCCACCTTGGTAGCACTCCCAGAGGGTAGGCAGGAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACTGTTGGGTTGGCACTaGGCGTTGTCCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLLGWH*ALSCNS
Trigger: AGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHLRIEI*FESGEN
Trigger: ATTCTCACCAGACTCAAACCAGATCTCAATTCGTAG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAAGGTCTACGTACTATaGAGAAAGTATGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHKVYVL*RKYAKF
Trigger: GAACTTGGCATACTTTCTCCATAGTACGTAGACCTT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATCTGTCACCCCGGTTaGAGTGCAATGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAICHPG*SAMVPS
Trigger: TGATGGCACCATTGCACTCCAACCGGGGTGACAGAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGTGTGTTGCAGCACTTaGACGTGGGCGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFVCCST*TWAFLP
Trigger: GGGAAGAAACGCCCACGTTCAAGTGCTGCAACACAC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTCCAGGGTAACTGACTaGCTTAGGTGTACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTASRVTD*LRCTPL
Trigger: AAGAGGAGTACACCTAAGTCAGTCAGTTACCCTGGA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTTTCTGAACTTCCAGTaGCGGGATCTGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAFLNFQ*RDLHSL
Trigger: AAGAGAGTGCAGATCCCGTCACTGGAAGTTCAGAAA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATCGGAAATAGCACCGTaGGGATGGTGCACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSEIAP*GWCTEE
Trigger: CTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTACAGTGTTCCAAGTTaGTCGGTCACAGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAYSVPS*SVTASS
Trigger: GGATGAGGCTGTGACCGATCAACTTGGAACACTGTA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGGCCGTACTGTTCGTATaGATACCATTTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAAVLFV*IPFPPT
Trigger: GGTAGGAGGAAATGGTATGCATACGAACAGTACGGC...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCTGAGCTGCAAATCTaGACTTGCACTGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASELQI*TCTDGP
Trigger: TGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAACCTCCTTGATATATaGTTCCTCCTATCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLNLLDI*FLLSAR
Trigger: CCTGGCCGATAGGAGGAAGCATATATCAAGGAGGTT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTACAGCACGGGAAGGTaGAATGTAAACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLYSTGR*NVNMDA
Trigger: GGCATCCATGTTTACATTGCACCTTCCCGTGCTGTA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCTTCAAAATCCAGCTaGGGTCAGGCGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSSKSS*GQAAAA
Trigger: AGCAGCCGCCGCCTGACCGCAGCTGGATTTTGAAGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCTGTTCCCCAATATCTaGCACCAACATGGCAACACT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLLFPNI*HQHGNT
Trigger: AGTGTTGCCATGTTGGTGCCAGATATTGGGGAACAG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACATCTCACAAAGTTCTTaGGTTTCAAGAGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHISQSS*VSRECV
Trigger: AACACACTCTCTTGAAACCCAAGAACTTTGTGAGAT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTTTCATTTCTTTCTGTaGTTTTCCGACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHFHFFL*FSDTKS
Trigger: GCTCTTTGTGTCGGAAAACCACAGAAAGAAATGAAA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTGTCCTTCTCCGGCCTaGTGGGGCATTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFCPSPA*WGILIS
Trigger: ACTGATGAGAATGCCCCACCAGGCCGGAGAAGGACA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTTCCTGCCTACCCTCTaGGAGTGCTACCAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFFLPTL*ECYQGG
Trigger: TCCACCTTGGTAGCACTCCCAGAGGGTAGGCAGGAA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAACTTGTATCGCTGTTaGGTTGGCACTGGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSNLYRC*VGTGRC
Trigger: ACAACGCCCAGTGCCAACCCAACAGCGATACAAGTT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGGCTGTCTCTGTCGATaGACTCGTAAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPGCLCR*TRKCCL
Trigger: CAAGCAGCACTTACGAGTCCATCGACAGAGACAGCC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGGACTACCGATCAAATaGAATATTAGCATGATACTG +
Preference number: 4 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHGLPIK*NISMIL
Trigger: CAGTATCATGCTAATATTCCATTTGATCGGTAGTCC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAATCTGCACTTGCACTaGTGGCCCATTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSANLHLH*WPIVDT
Trigger: AGTATCCACAATGGGCCATCAGTGCAAGTGCAGATT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGATGATTTTCTGTGCTaGTGTAAGCAGGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLDDFLC*CKQAIR
Trigger: CCTGATAGCCTGCTTACATCAGCACAGAAAATCATC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCCATTTCAGTGTTCATaGGGAAGCGCTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAPFQCS*GSASVK
Trigger: TTTCACAGAAGCGCTTCCTCATGAACACTGAAATGG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAACTGCTCCAGCCTATaGTCAATCCCCCAATATCAA +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLNCSSL*SIPQYQ
Trigger: TTGATATTGGGGGATTGATCATAGGCTGGAGCAGTT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTGGCGACATCATTTTTaGGTACGCTGCCAATGTACT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAWRHHF*VRCQCT
Trigger: AGTACATTGGCAGCGTACTCAAAAATGATGTCGCCA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCTCGTAAGTGCTGCTTaGTGTAGCCCTTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFLVSAA*CSPCCH
Trigger: GTGGCAACAAGGGCTACATCAAGCAGCACTTACGAG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACAGTGGTGGATCATGTaGCTCTCCAAATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSQWWIM*LSKSLL
Trigger: CAGCAAAGATTTGGAGAGTCACATGATCCACCACTG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTTCGCCTGTGGTTTCTaGCACCAACATATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAFACGF*HQHMLY
Trigger: GTACAACATATGTTGGTGTCAGAAACCACAGGCGAA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAACTCTGCCACTTTGTaGAATCGCGTCGTTAATAGC +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLNSATL*NRVVNS
Trigger: GCTATTAACGACGCGATTTCACAAAGTGGCAGAGTT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATTTCTGAACTTCCAGTaGCGGGATCTGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSFLNFQ*RDLHSL
Trigger: AAGAGAGTGCAGATCCCGTCACTGGAAGTTCAGAAA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTGGCAGGAAGTTGTCTaGCAGCGTAAAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAWQEVV*QRKGET
Trigger: AGTTTCACCTTTACGCTGTCAGACAACTTCCTGCCA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGGGGAAAGAACCTCCTTaGTATATGCTTCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAGKEPP*YMLPPI
Trigger: GATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCC...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGGACTCTCCAAATCTTTaGTGTTGTCCGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTADSPNL*CCPLCA
Trigger: AGCACATAGCGGACAACAGCAAAGATTTGGAGAGTC...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCAGCAGCAGGTGACTaGATTACTTTAGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASAAGD*ITLAGI
Trigger: GATTCCGGCTAAAGTAATCCAGTCACCTGCTGCTGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGCCTTCCCTTCATTCTaGGCAAGAGTGTCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFAFPSF*ARVSGV
Trigger: TACCCCTGACACTCTTGCCCAGAATGAAGGGAAGGC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACGCACTGTTGGGCTTTaGATTGGGTGTGGATATTGG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPRTVGL*IGCGYW
Trigger: CCAATATCCACACCCAATCCAAAGCCCAACAGTGCG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGACTGATGGCCCATTGTaGATACTCAGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLTDGPL*ILSSLS
Trigger: AGAGAGTGAACTGAGTATCCACAATGGGCCATCAGT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGACTGATGGCCCATTGTaGATACTCAGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTATDGPL*ILSSLS
Trigger: AGAGAGTGAACTGAGTATCCACAATGGGCCATCAGT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGGTTTCTTCAGCACTTaGCAATCGCTCCACTATCAC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAGFFST*QSLHYH
Trigger: GTGATAGTGGAGCGATTGCCAAGTGCTGAAGAAACC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLGLSEL*IRLWFL
Trigger: CAGAAACCACAGGCGAATCCATAACTCTGATAAGCC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTACCCAGAACTTCACTaGGAGTCTGGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAYPELH*ESGTSV
Trigger: AACTGATGTCCCAGACTCCCAGTGAAGTTCTGGGTA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACTGGTCTTAAACTTCTaGACTCAAGCAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSLVLNF*TQAVLQ
Trigger: CTGGAGGACTGCTTGAGTCCAGAAGTTTAAGACCAG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGACACCCGCCATATTCTaGATGATTAGAGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTATPAIF*MIRERE
Trigger: CTCCCTTTCTCTAATCATCCAGAATATGGCGGGTGT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTGTCCCTGGGAAGCATaGGACGAAATATTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSACPWEA*DEIFGL
Trigger: AAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 72 bp GCGTATCCCATTCGAAAACCTTTACAGTGTTCCAAGTaGATCGGTCACAGCCTCATCCAGGTGTTAGAAATC +
Preference number: 4 (lower is better)
Translates to: AYPIRKPLQCSK*IGHSLIQVLEI
Trigger: GATTTCTAACACCTGGATGAGGCTGTGACCGATCAACTTGGAACACTGTAAAGGTTTTCGAATGGGATACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAGTATCAGCAGCAGGTaGCTGGATTACTTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSISSR*LDYFSR
Trigger: CCGGCTAAAGTAATCCAGTCACCTGCTGCTGATACT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATCCAGGGTAACTGACTaGCTTAGGTGTACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSRVTD*LRCTPL
Trigger: AAGAGGAGTACACCTAAGTCAGTCAGTTACCCTGGA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAACTGCTCCAGCCTATaGTCAATCCCCCAATATCAA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSANCSSL*SIPQYQ
Trigger: TTGATATTGGGGGATTGATCATAGGCTGGAGCAGTT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTCGGAAATAGCACCGTaGGGATGGTGCACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSEIAP*GWCTEE
Trigger: CTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACAAAGACAGGGGATATaGTTATGTTGTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSQRQGI*LCCPWE
Trigger: TTCCCAGGGACAACATAATCATATCCCCTGTCTTTG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGCCGTACTGTTCGTATaGATACCATTTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPAVLFV*IPFPPT
Trigger: GGTAGGAGGAAATGGTATGCATACGAACAGTACGGC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGATAACTGTTCTGAGCTaGAAATCTGCACTTGCACTG +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAITVLS*KSALAL
Trigger: CAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTAT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGACTCTCCAAATCTTTaGTGTTGTCCGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSDSPNL*CCPLCA
Trigger: AGCACATAGCGGACAACAGCAAAGATTTGGAGAGTC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGACTCTCCAAATCTTTaGTGTTGTCCGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSADSPNL*CCPLCA
Trigger: AGCACATAGCGGACAACAGCAAAGATTTGGAGAGTC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCTTCTACTGCTTTCCTaGTCGAGTCATTATTCCACC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSALLLLS*SSHYST
Trigger: GGTGGAATAATGACTCGAGCAGGAAAGCAGTAGAAG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGGAATCCTCTTCTACTaGTTTCCTGCTCGAGTCATT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSGILFY*FPARVI
Trigger: AATGACTCGAGCAGGAAAGCAGTAGAAGAGGATTCC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTACCCCCTCCCAGAACTaGCTCCCATTTCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVTPSQN*LPFLTG
Trigger: TCCAGTGAGAAATGGGAGGCAGTTCTGGGAGGGGGT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGACCTGTTTCGTCCTCTaGTCACAAGAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTATCFVL*SQEIHR
Trigger: ACGATGAATTTCTTGTGAGCAGAGGACGAAACAGGT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATACAGCACGGGAAGGTaGAATGTAAACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPYSTGR*NVNMDA
Trigger: GGCATCCATGTTTACATTGCACCTTCCCGTGCTGTA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACTCAACAGAGAAGCCTaGTTGTCTTTGTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSLNREA*LSLSSQ
Trigger: TTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCTGAACAGATGAACTaGTCTCCCATGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASEQMN*SPMNTV
Trigger: GACTGTGTTCATGGGAGAGCAGTTCATCTGTTCAGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATCTGAACAGATGAACTaGTCTCCCATGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSSEQMN*SPMNTV
Trigger: GACTGTGTTCATGGGAGAGCAGTTCATCTGTTCAGA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGAGATATTATAGTGGCTaGCACACTGGACCATACGTT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTARYYSG*HTGPYV
Trigger: AACGTATGGTCCAGTGTGGCAGCCACTATAATATCT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATCAGCAGCAGGTGACTaGATTACTTTAGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSAAGD*ITLAGI
Trigger: GATTCCGGCTAAAGTAATCCAGTCACCTGCTGCTGA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGCCTTCCCTTCATTCTaGGCAAGAGTGTCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVAFPSF*ARVSGV
Trigger: TACCCCTGACACTCTTGCCCAGAATGAAGGGAAGGC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGCTTCAAGTTCCTCCTaGCTTCTAGATGTAATATGG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLASSSS*LLDVIW
Trigger: CCATATTACATCTAGAAGCCAGGAGGAACTTGAAGC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTGGCATCATTGTCATaGTCATTCACCACGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLASLS*SFTTWA
Trigger: AGCCCACGTGGTGAATGACCATGACAATGATGCCAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCGACACAAAGAGCTaGAGGGGCTTACGCACTGTT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSDTKS*RGLRTV
Trigger: AACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCATAGTGCCCCAGGTTaGCTCTTGTCAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFHSAPG*LLSTLQ
Trigger: CTGCAGAGTTGACAAGAGCCAACCTGGGGCACTATG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTCGTCTGAAGCGTTTTaGTCTGTCCTTTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTASSEAF*SVLSLN
Trigger: ATTGAGAGAAAGGACAGACCAAAACGCTTCAGACGA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCTGTTGGGTTGGCACTaGGCGTTGTCCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVLLGWH*ALSCNS
Trigger: AGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGTATCGCTGTTGGGTTaGCACTGGGCGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPVSLLG*HWALSC
Trigger: GCAGGACAACGCCCAGTGCCAACCCAACAGCGATAC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGGCTGTCTCTGTCGATaGACTCGTAAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFGCLCR*TRKCCL
Trigger: CAAGCAGCACTTACGAGTCCATCGACAGAGACAGCC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAACTTCACTGGGAGTCTaGGACATCAGTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSTSLGV*DISSED
Trigger: ATCTTCAGAACTGATGTCCCAGACTCCCAGTGAAGT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAACCTCCCAAGTAGCTaGTGCTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVNLPSS*CYRHVP
Trigger: TGGCACGTGCCTGTAGCACCAGCTACTTGGGAGGTT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCACACCCGCCATATTCTaGATGATTAGAGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSATPAIF*MIRERE
Trigger: CTCCCTTTCTCTAATCATCCAGAATATGGCGGGTGT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTCTGGCCAAAGAACTTaGACTACCGATCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLSGQRT*TTDQME
Trigger: TTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGATTCTAGGGCACAAATaGATAACCAGACCCACGATA +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLILGHK*ITRPTI
Trigger: TATCGTGGGTCTGGTTATCCATTTGTGCCCTAGAAT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGACACAGTTTCAGATTaGGTTTTTCAAAGACAGGGG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLDTVSD*VFQRQG
Trigger: CCCCTGTCTTTGAAAAACCCAATCTGAAACTGTGTC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTACATGGCTGTTAAGTaGCAGAGCCAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAYMAVK*QSQCLS
Trigger: TGAAAGACACTGGCTCTGCCACTTAACAGCCATGTA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
3UTR CAA 72 bp AACACAATAAGTCTCAACAGAGAAGCCTGCTTGTCTTaGTCAAGCCAATTACAGCACGGGAAGGTGCAATGT +
Preference number: 4 (lower is better)
Translates to: NTISLNREACLS*SSQLQHGKVQC
Trigger: ACATTGCACCTTCCCGTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAGACTTATTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATGTAATATGGCACTCTaGGCACATCAGTATCACTTC +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSCNMAL*AHQYHF
Trigger: GAAGTGATACTGATGTGCTCAGAGTGCCATATTACA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAATCTGCACTTGCACTaGTGGCCCATTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFNLHLH*WPIVDT
Trigger: AGTATCCACAATGGGCCATCAGTGCAAGTGCAGATT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAAACTGCTCCAGCCTATaGTCAATCCCCCAATATCAA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPNCSSL*SIPQYQ
Trigger: TTGATATTGGGGGATTGATCATAGGCTGGAGCAGTT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCTTAACCTGCCCATCTaGCAATTCCTGCCTACCCTC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVLNLPI*QFLPTL
Trigger: GAGGGTAGGCAGGAATTGTCAGATGGGCAGGTTAAG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACAAAATGTCATCGTCTaGAGCGTTTTGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPQNVIV*SVLVCP
Trigger: AGGACAGACCAAAACGCTTCAGACGATGACATTTTG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGCATGTTTCCACATATaGGACTTCAAAGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAACFHI*DFKEGG
Trigger: TCCTCCTTCTTTGAAGTCTCATATGTGGAAACATGC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCACTGCTCTTTAATTaGGTCTTTCCAGGGGATTTC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASLLFN*VFPGDF
Trigger: GAAATCCCCTGGAAAGACTCAATTAAAGAGCAGTGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGGTCCTTATTCAGGATaGTGTTTACAATTTCACCCT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLGPYSG*CLQFHP
Trigger: AGGGTGAAATTGTAAACATCATCCTGAATAAGGACC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGCTCACAGTCTGCATTTaGCAAGTGAGAAGAAAACTA +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLLTVCI*QVRRKL
Trigger: TAGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAG...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTACAGTGTTCCAAGTTaGTCGGTCACAGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFYSVPS*SVTASS
Trigger: GGATGAGGCTGTGACCGATCAACTTGGAACACTGTA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACCAACATGGCAACACTaGTACTTTCTTCCATATCTG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSPTWQH*YFLPYL
Trigger: CAGATATGGAAGAAAGTAGCAGTGTTGCCATGTTGG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311921.8
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCACAAGCATCGATACATaGCGTACTGTTCGTATGCAT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSATSIDT*RTVRMH
Trigger: ATGCATACGAACAGTACGGCATGTATCGATGCTTGT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAATAGCAATGACGACTaGATCGACCCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPNSNDD*IDPTRR
Trigger: GCGCCTGGTGGGGTCGATGCAGTCGTCATTGCTATT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATAACTGTTCTGAGCTaGAAATCTGCACTTGCACTG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSITVLS*KSALAL
Trigger: CAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCAGTGACGGGATCTaGACTCTCTTCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSSDGI*TLFTAL
Trigger: AAGAGCAGTGAAGAGAGTGCAGATCCCGTCACTGGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACTTCTACTGCTTTCCTaGTCGAGTCATTATTCCACC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLLLLS*SSHYST
Trigger: GGTGGAATAATGACTCGAGCAGGAAAGCAGTAGAAG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAACCTCCTTGATATATaGTTCCTCCTATCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFNLLDI*FLLSAR
Trigger: CCTGGCCGATAGGAGGAAGCATATATCAAGGAGGTT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACTCAACAGAGAAGCCTaGTTGTCTTTGTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLNREA*LSLSSQ
Trigger: TTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGTTCTAGAGCTTCCATaGTCGGATTCTTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLVLELP*SDSLIW
Trigger: CCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAAC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGCTTCTAGATGTAATATaGCACTCTGAGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTALLDVI*HSEHIS
Trigger: ACTGATGTGCTCAGAGTGCCATATTACATCTAGAAG...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATGTTGGGCTTTGGATTaGGTGTGGATATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPCWALD*VWILAS
Trigger: TGATGCCAATATCCACACCCAATCCAAAGCCCAACA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGGGCTTACGCACTGTTaGGCTTTGGATTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPGLTHC*ALDWVW
Trigger: CCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGGTTTCTTCAGCACTTaGCAATCGCTCCACTATCAC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFGFFST*QSLHYH
Trigger: GTGATAGTGGAGCGATTGCCAAGTGCTGAAGAAACC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAACTTGTATCGCTGTTaGGTTGGCACTGGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFNLYRC*VGTGRC
Trigger: ACAACGCCCAGTGCCAACCCAACAGCGATACAAGTT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAACCTCCCAAGTAGCTaGTGCTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPNLPSS*CYRHVP
Trigger: TGGCACGTGCCTGTAGCACCAGCTACTTGGGAGGTT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGATACTGTTGAACACTaGGACACCCGCCATATTCTG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFDTVEH*DTRHIL
Trigger: CAGAATATGGCGGGTGTCCCAGTGTTCAACAGTATC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCTGGCCAAAGAACTTaGACTACCGATCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASGQRT*TTDQME
Trigger: TTCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCAACATTGCACTATCTaGCCAAAGAACTTGGACTAC +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAQHCTI*PKNLDY
Trigger: GTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTGTCCCTGGGAAGCATaGGACGAAATATTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFCPWEA*DEIFGL
Trigger: AAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGACACAGTTTCAGATTaGGTTTTTCAAAGACAGGGG +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSDTVSD*VFQRQG
Trigger: CCCCTGTCTTTGAAAAACCCAATCTGAAACTGTGTC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATACATGGCTGTTAAGTaGCAGAGCCAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPYMAVK*QSQCLS
Trigger: TGAAAGACACTGGCTCTGCCACTTAACAGCCATGTA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
3UTR CAA 72 bp GGACTACCGATCAAATGGAATATTAGCATGATACTGTaGAACACTGGGACACCCGCCATATTCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: GLPIKWNISMIL*NTGTPAIFWMI
Trigger: AATCATCCAGAATATGGCGGGTGTCCCAGTGTTCAACAGTATCATGCTAATATTCCATTTGATCGGTAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 72 bp ACTAAAAACACAATAAGTCTCAACAGAGAAGCCTGCTaGTCTTTGTCAAGCCAATTACAGCACGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TKNTISLNREAC*SLSSQLQHGKV
Trigger: CACCTTCCCGTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTTGAGACTTATTGTGTTTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 72 bp AGATTGGGTTTTTCAAAGACAGGGGATATGATTATGTaGTCCCTGGGAAGCATGGGACGAAATATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLGFSKTGDMIM*SLGSMGRNIWP
Trigger: AGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATCCCCTGTCTTTGAAAAACCCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAGTATCAGCAGCAGGTaGCTGGATTACTTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSISSR*LDYFSR
Trigger: CCGGCTAAAGTAATCCAGTCACCTGCTGCTGATACT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGCAGTTTGGACAGTATaGGTCTGTAGATTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFAVWTV*VCRLST
Trigger: TGTGGACAATCTACAGACTCATACTGTCCAAACTGC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGATGATTTTCTGTGCTaGTGTAAGCAGGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFDDFLC*CKQAIR
Trigger: CCTGATAGCCTGCTTACATCAGCACAGAAAATCATC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACTCGTAAGTGCTGCTTaGTGTAGCCCTTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPLVSAA*CSPCCH
Trigger: GTGGCAACAAGGGCTACATCAAGCAGCACTTACGAG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACAGTGGTGGATCATGTaGCTCTCCAAATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVQWWIM*LSKSLL
Trigger: CAGCAAAGATTTGGAGAGTCACATGATCCACCACTG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGATTAGAAGTTGCTATTaGCAAGGTATCTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAIRSCY*QGIWKT
Trigger: AGTCTTCCAGATACCTTGTCAATAGCAACTTCTAAT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATATTGTTTCTGGACTaGAGACTTATTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAILFLD*RLIPFL
Trigger: CAGGAAGGGAATAAGTCTTCAGTCCAGAAACAATAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGACACTAAGAAGGGGTaGCAGAGGGTTAATACAGGA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVDTKKG*QRVNTG
Trigger: TCCTGTATTAACCCTCTGTCACCCCTTCTTAGTGTC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTACAGTGTTCCAAGTTaGTCGGTCACAGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVYSVPS*SVTASS
Trigger: GGATGAGGCTGTGACCGATCAACTTGGAACACTGTA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGAAGGCCAGAATCAGATaGAACTTTAAAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAKARIR*NFKGFE
Trigger: TTCAAAGCCTTTAAAGTTTCATCTGATTCTGGCCTT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAAAAAACAGAAAATTATaGAGCCACCAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPKNRKL*SHQQPP
Trigger: AGGTGGCTGCTGGTGGCTTCATAATTTTCTGTTTTT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAATAACTGTTCTGAGCTaGAAATCTGCACTTGCACTG +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPITVLS*KSALAL
Trigger: CAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTAT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATGCCTGTCTTAACCTaGCCATCTGACAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVMPVLT*PSDNSC
Trigger: GCAGGAATTGTCAGATGGGCAGGTTAAGACAGGCAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCACTGGGCGTTGTCCTaGAACTCTTTCAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFHWALS*NSFKMS
Trigger: TGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGATTCTTCACACTGCTTaGACTGGTATATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLILHTA*TGIFLS
Trigger: AGACAAGAATATACCAGTGCAAGCAGTGTGAAGAAT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTCCAGTGACGGGATCTaGACTCTCTTCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSSDGI*TLFTAL
Trigger: AAGAGCAGTGAAGAGAGTGCAGATCCCGTCACTGGA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGGAATCCTCTTCTACTaGTTTCCTGCTCGAGTCATT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFGILFY*FPARVI
Trigger: AATGACTCGAGCAGGAAAGCAGTAGAAGAGGATTCC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCACCCTTTCTTAACTCTTaGTGGCATTTCTACACTCTA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSPFLNS*WHFYTL
Trigger: TAGAGTGTAGAAATGCCAGCAAGAGTTAAGAAAGGG...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCCCTTTCTTAACTCTTaGTGGCATTTCTACACTCTA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAPFLNS*WHFYTL
Trigger: TAGAGTGTAGAAATGCCAGCAAGAGTTAAGAAAGGG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTTCTAGAGCTTCCATaGTCGGATTCTTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVLELP*SDSLIW
Trigger: CCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACCAACATGGCAACACTaGTACTTTCTTCCATATCCA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPPTWQH*YFLPYP
Trigger: TGGATATGGAAGAAAGTAGCAGTGTTGCCATGTTGG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCTGTTCCCCAATATCTaGCACCAACATGGCAACACT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFLFPNI*HQHGNT
Trigger: AGTGTTGCCATGTTGGTGCCAGATATTGGGGAACAG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGGTCATTCACCACGTaGGCTTCAAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPWSFTT*ASSSSW
Trigger: CCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATTGGCATCATTGTCATaGTCATTCACCACGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVLASLS*SFTTWA
Trigger: AGCCCACGTGGTGAATGACCATGACAATGATGCCAA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCGCACTGTTGGGCTTTaGATTGGGTGTGGATATTGG +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVRTVGL*IGCGYW
Trigger: CCAATATCCACACCCAATCCAAAGCCCAACAGTGCG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTTTCATTTCTTTCTGTaGTTTTCCGACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLFHFFL*FSDTKS
Trigger: GCTCTTTGTGTCGGAAAACCACAGAAAGAAATGAAA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCTGGGATATCTGGAATaGTTTCATTTCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSALGYLE*FHFFLW
Trigger: CCACAGAAAGAAATGAAACCATTCCAGATATCCCAG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATTGTCCACACTTACTaGGATATCTGGAATGGTTTC +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSIVHTY*DIWNGF
Trigger: GAAACCATTCCAGATATCCCAGTAAGTGTGGACAAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTACTGATGGCCCATTGTaGATACTCAGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFTDGPL*ILSSLS
Trigger: AGAGAGTGAACTGAGTATCCACAATGGGCCATCAGT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACATAGTGCCCCAGGTTaGCTCTTGTCAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPHSAPG*LLSTLQ
Trigger: CTGCAGAGTTGACAAGAGCCAACCTGGGGCACTATG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAAGGTGGAGTTGCTTTaGTTAAGACTAGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLKVELL*LRLVNP
Trigger: TGGATTAACTAGTCTTAACCAAAGCAACTCCACCTT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAACTTGTATCGCTGTTaGGTTGGCACTGGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVNLYRC*VGTGRC
Trigger: ACAACGCCCAGTGCCAACCCAACAGCGATACAAGTT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATACCCAGAACTTCACTaGGAGTCTGGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVYPELH*ESGTSV
Trigger: AACTGATGTCCCAGACTCCCAGTGAAGTTCTGGGTA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTACCCAGAACTTCACTaGGAGTCTGGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFYPELH*ESGTSV
Trigger: AACTGATGTCCCAGACTCCCAGTGAAGTTCTGGGTA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTTTAGAGCTGTATTGTaGTCCTTATTCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLFRAVL*SLFRMM
Trigger: CATCATCCTGAATAAGGACCACAATACAGCTCTAAA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAATGTTGCAAGATGCCTaGCCCCACTTAAATAATTCC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPMLQDA*PHLNNS
Trigger: GGAATTATTTAAGTGGGGCCAGGCATCTTGCAACAT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACTGGTCTTAAACTTCTaGACTCAAGCAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVLVLNF*TQAVLQ
Trigger: CTGGAGGACTGCTTGAGTCCAGAAGTTTAAGACCAG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAATCTGTCACCCCGGTTaGAGTGCAATGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPICHPG*SAMVPS
Trigger: TGATGGCACCATTGCACTCCAACCGGGGTGACAGAT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGATACTGTTGAACACTaGGACACCCGCCATATTCTG +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVDTVEH*DTRHIL
Trigger: CAGAATATGGCGGGTGTCCCAGTGTTCAACAGTATC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGGGACTACCGATCAAATaGAATATTAGCATGATACTG +
Preference number: 4 (lower is better)
Translates to: EERSRTKASVGVTTLHYLGLPIK*NISMIL
Trigger: CAGTATCATGCTAATATTCCATTTGATCGGTAGTCC...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAATTCTAGGGCACAAATaGATAACCAGACCCACGATA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPILGHK*ITRPTI
Trigger: TATCGTGGGTCTGGTTATCCATTTGTGCCCTAGAAT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATGGGACGAAATATTTaGCCTTGGTCACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSMGRNI*PWSLST
Trigger: AGTTGAAAGTGACCAAGGCCAAATATTTCGTCCCAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCTATCTACTTGCCTTTaGCTAGTATCTGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSALSTCL*LVSGSK
Trigger: TTTAGATCCAGATACTAGTCAAAGGCAAGTAGATAG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACAAAATGTCATCGTCTaGAGCGTTTTGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVQNVIV*SVLVCP
Trigger: AGGACAGACCAAAACGCTTCAGACGATGACATTTTG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTTCGCCTGTGGTTTCTaGCACCAACATATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFFACGF*HQHMLY
Trigger: GTACAACATATGTTGGTGTCAGAAACCACAGGCGAA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATTCGCCTGTGGTTTCTaGCACCAACATATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVFACGF*HQHMLY
Trigger: GTACAACATATGTTGGTGTCAGAAACCACAGGCGAA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGCATGTTTCCACATATaGGACTTCAAAGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFACFHI*DFKEGG
Trigger: TCCTCCTTCTTTGAAGTCTCATATGTGGAAACATGC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAACTCTGCCACTTTGTaGAATCGCGTCGTTAATAGC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVNSATL*NRVVNS
Trigger: GCTATTAACGACGCGATTTCACAAAGTGGCAGAGTT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTTTCTGAACTTCCAGTaGCGGGATCTGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVFLNFQ*RDLHSL
Trigger: AAGAGAGTGCAGATCCCGTCACTGGAAGTTCAGAAA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGGTCCTTATTCAGGATaGTGTTTACAATTTCACCCT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPGPYSG*CLQFHP
Trigger: AGGGTGAAATTGTAAACATCATCCTGAATAAGGACC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACTCACAGTCTGCATTTaGCAAGTGAGAAGAAAACTA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLTVCI*QVRRKL
Trigger: TAGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGGGAAAGAACCTCCTTaGTATATGCTTCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVGKEPP*YMLPPI
Trigger: GATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTTTCCAGGAAAAGAATaGACACAACCTGTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAFPGKE*TQPVVN
Trigger: ATTAACCACAGGTTGTGTTCATTCTTTTCCTGGAAA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACAAAGACAGGGGATATaGTTATGTTGTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVQRQGI*LCCPWE
Trigger: TTCCCAGGGACAACATAATCATATCCCCTGTCTTTG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACTGCAAATCTGCACTTaGACTGATGGCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPLQICT*TDGPLW
Trigger: CCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATGCCTGTCTTAACCTaGCCATCTGACAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVMPVLT*PSDNSC
Trigger: GCAGGAATTGTCAGATGGGCAGGTTAAGACAGGCAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCACTGGGCGTTGTCCTaGAACTCTTTCAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFHWALS*NSFKMS
Trigger: TGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATTCTTCACACTGCTTaGACTGGTATATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAILHTA*TGIFLS
Trigger: AGACAAGAATATACCAGTGCAAGCAGTGTGAAGAAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATCCAGTGACGGGATCTaGACTCTCTTCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPSSDGI*TLFTAL
Trigger: AAGAGCAGTGAAGAGAGTGCAGATCCCGTCACTGGA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCGGTGTCACAACATTaGACTATCTGGCCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSVSQH*TIWPKN
Trigger: GTTCTTTGGCCAGATAGTGCAATGTTGTGACACCGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTTCCGCTTTAAGGCATaGAGCTTGATGTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFFRFKA*SLMCRI
Trigger: TATCCTGCACATCAAGCTGCATGCCTTAAAGCGGAA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTTGGCATCATTGTCATaGTCATTCACCACGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVLASLS*SFTTWA
Trigger: AGCCCACGTGGTGAATGACCATGACAATGATGCCAA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATGTTGGGCTTTGGATTaGGTGTGGATATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVCWALD*VWILAS
Trigger: TGATGCCAATATCCACACCCAATCCAAAGCCCAACA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACGCACTGTTGGGCTTTaGATTGGGTGTGGATATTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPRTVGL*IGCGYW
Trigger: CCAATATCCACACCCAATCCAAAGCCCAACAGTGCG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAATTGTCCACACTTACTaGGATATCTGGAATGGTTTC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPIVHTY*DIWNGF
Trigger: GAAACCATTCCAGATATCCCAGTAAGTGTGGACAAT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTCGTCTGAAGCGTTTTaGTCTGTCCTTTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSSEAF*SVLSLN
Trigger: ATTGAGAGAAAGGACAGACCAAAACGCTTCAGACGA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTTCAAAGAAGGAGGATaGCTACACACATACCCACAC +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFFKEGG*LHTYPH
Trigger: GTGTGGGTATGTGTGTAGCCATCCTCCTTCTTTGAA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGAGAGGTTTTCTTTGCTaGTTGATTCAAAACCACAAA +
Preference number: 4 (lower is better)
Translates to: SSKITSTTSSVAGSCLTARGFLC*LIQNHK
Trigger: TTTGTGGTTTTGAATCAACCAGCAAAGAAAACCTCT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCCATTTCAGTGTTCATaGGGAAGCGCTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVPFQCS*GSASVK
Trigger: TTTCACAGAAGCGCTTCCTCATGAACACTGAAATGG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACTATCTACTTGCCTTTaGCTAGTATCTGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPLSTCL*LVSGSK
Trigger: TTTAGATCCAGATACTAGTCAAAGGCAAGTAGATAG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAACTCTGCCACTTTGTaGAATCGCGTCGTTAATAGC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVNSATL*NRVVNS
Trigger: GCTATTAACGACGCGATTTCACAAAGTGGCAGAGTT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTCACTGCTCTTTAATTaGGTCTTTCCAGGGGATTTC +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSLLFN*VFPGDF
Trigger: GAAATCCCCTGGAAAGACTCAATTAAAGAGCAGTGA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTCGTGCTCTTTCATATaGTCCAAGAGGTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSCSFI*SKRFSL
Trigger: CAAAGAAAACCTCTTGGATCATATGAAAGAGCACGA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGGTCCTTATTCAGGATaGTGTTTACAATTTCACCCT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFGPYSG*CLQFHP
Trigger: AGGGTGAAATTGTAAACATCATCCTGAATAAGGACC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAGTTCTGACAGACACTaGAAAGAACCTCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSSDRH*KEPLRT
Trigger: TGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAGTTCTGACAGACACTaGAAAGAACCTCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSSDRH*KEPLRT
Trigger: TGTTCTCAGAGGTTCTTTTCAGTGTCTGTCAGAACT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTTCCAGGAAAAGAATaGACACAACCTGTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPFPGKE*TQPVVN
Trigger: ATTAACCACAGGTTGTGTTCATTCTTTTCCTGGAAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAACAAGCATCGATACATaGCGTACTGTTCGTATGCAT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVTSIDT*RTVRMH
Trigger: ATGCATACGAACAGTACGGCATGTATCGATGCTTGT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTAATTTTGGTCACTTaGATGTTTCCACATATGAGA +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVILVT*MFPHMR
Trigger: TCTCATATGTGGAAACATGCAAGTGACCAAAATTAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCTGCACTCTCTTCACTaGTCTTTAATTGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFLHSLH*SLIESF
Trigger: GAAAGACTCAATTAAAGAGCAGTGAAGAGAGTGCAG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCTTCTACTGCTTTCCTaGTCGAGTCATTATTCCACC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVLLLLS*SSHYST
Trigger: GGTGGAATAATGACTCGAGCAGGAAAGCAGTAGAAG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCCCTTTCTTAACTCTTaGTGGCATTTCTACACTCTA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFPFLNS*WHFYTL
Trigger: TAGAGTGTAGAAATGCCAGCAAGAGTTAAGAAAGGG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAGATATTATAGTGGCTaGCACACTGGACCATACGTT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFRYYSG*HTGPYV
Trigger: AACGTATGGTCCAGTGTGGCAGCCACTATAATATCT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATCAGCAGCAGGTGACTaGATTACTTTAGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPSAAGD*ITLAGI
Trigger: GATTCCGGCTAAAGTAATCCAGTCACCTGCTGCTGA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCTTCTAGATGTAATATaGCACTCTGAGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFLLDVI*HSEHIS
Trigger: ACTGATGTGCTCAGAGTGCCATATTACATCTAGAAG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGCTTTGGATTGGGTGTaGATATTGGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFALDWV*ILASLS
Trigger: TGACAATGATGCCAATATCCACACCCAATCCAAAGC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCGTCTGAAGCGTTTTaGTCTGTCCTTTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSSEAF*SVLSLN
Trigger: ATTGAGAGAAAGGACAGACCAAAACGCTTCAGACGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCATCTATATTGTTTCTaGACTGAAGACTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAHLYCF*TEDLFP
Trigger: AGGGAATAAGTCTTCAGTCCAGAAACAATATAGATG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTACTTCACTGGGAGTCTaGGACATCAGTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVTSLGV*DISSED
Trigger: ATCTTCAGAACTGATGTCCCAGACTCCCAGTGAAGT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAGAGGTTTTCTTTGCTaGTTGATTCAAAACCACAAA +
Preference number: 4 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSRGFLC*LIQNHK
Trigger: TTTGTGGTTTTGAATCAACCAGCAAAGAAAACCTCT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACTGGTCTTAAACTTCTaGACTCAAGCAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPLVLNF*TQAVLQ
Trigger: CTGGAGGACTGCTTGAGTCCAGAAGTTTAAGACCAG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAATGAACACAACCTGTaGTTAATAGAACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFNEHNL*LIELGA
Trigger: GGCTCCAAGTTCTATTAACCACAGGTTGTGTTCATT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGCAGTTTGGACAGTATaGGTCTGTAGATTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPAVWTV*VCRLST
Trigger: TGTGGACAATCTACAGACTCATACTGTCCAAACTGC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGATGATTTTCTGTGCTaGTGTAAGCAGGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPDDFLC*CKQAIR
Trigger: CCTGATAGCCTGCTTACATCAGCACAGAAAATCATC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACCATTTCAGTGTTCATaGGGAAGCGCTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPPFQCS*GSASVK
Trigger: TTTCACAGAAGCGCTTCCTCATGAACACTGAAATGG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGGCGACATCATTTTTaGGTACGCTGCCAATGTACT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPWRHHF*VRCQCT
Trigger: AGTACATTGGCAGCGTACTCAAAAATGATGTCGCCA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCATATTGTTTCTGGACTaGAGACTTATTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFILFLD*RLIPFL
Trigger: CAGGAAGGGAATAAGTCTTCAGTCCAGAAACAATAT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATATTGTTTCTGGACTaGAGACTTATTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVILFLD*RLIPFL
Trigger: CAGGAAGGGAATAAGTCTTCAGTCCAGAAACAATAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTCGTGCTCTTTCATATaGTCCAAGAGGTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSCSFI*SKRFSL
Trigger: CAAAGAAAACCTCTTGGATCATATGAAAGAGCACGA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCTCACAGTCTGCATTTaGCAAGTGAGAAGAAAACTA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFLTVCI*QVRRKL
Trigger: TAGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAGAGTGATCAAGGTGTaGACATATCACTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFRVIKV*TYHCSF
Trigger: AAAACTACAGTGATATGTTCACACCTTGATCACTCT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTACAAGCATCGATACATaGCGTACTGTTCGTATGCAT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVTSIDT*RTVRMH
Trigger: ATGCATACGAACAGTACGGCATGTATCGATGCTTGT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACACTGGGCGTTGTCCTaGAACTCTTTCAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPHWALS*NSFKMS
Trigger: TGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTATTCTTCACACTGCTTaGACTGGTATATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFILHTA*TGIFLS
Trigger: AGACAAGAATATACCAGTGCAAGCAGTGTGAAGAAT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGTAATTTTGGTCACTTaGATGTTTCCACATATGAGA +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPVILVT*MFPHMR
Trigger: TCTCATATGTGGAAACATGCAAGTGACCAAAATTAC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATACTTCTTAAAACGTaGCTACAGCGTATCCCATTC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVILLKT*LQRIPF
Trigger: GAATGGGATACGCTGTAGGCACGTTTTAAGAAGTAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR GCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCATACTTCTTAAAACGTaGCTACAGCGTATCCCATTC +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFILLKT*LQRIPF
Trigger: GAATGGGATACGCTGTAGGCACGTTTTAAGAAGTAT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTGCTTCAAGTTCCTCCTaGCTTCTAGATGTAATATGG +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVASSSS*LLDVIW
Trigger: CCATATTACATCTAGAAGCCAGGAGGAACTTGAAGC...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGTTGGGCTTTGGATTaGGTGTGGATATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPCWALD*VWILAS
Trigger: TGATGCCAATATCCACACCCAATCCAAAGCCCAACA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAACTTACTGGGATATCTaGAATGGTTTCATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPTYWDI*NGFISF
Trigger: GAAAGAAATGAAACCATTCCAGATATCCCAGTAAGT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATTGTCCACACTTACTaGGATATCTGGAATGGTTTC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVIVHTY*DIWNGF
Trigger: GAAACCATTCCAGATATCCCAGTAAGTGTGGACAAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAAGGTGGAGTTGCTTTaGTTAAGACTAGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFKVELL*LRLVNP
Trigger: TGGATTAACTAGTCTTAACCAAAGCAACTCCACCTT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPGLSEL*IRLWFL
Trigger: CAGAAACCACAGGCGAATCCATAACTCTGATAAGCC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATTCAAAGAAGGAGGATaGCTACACACATACCCACAC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPFKEGG*LHTYPH
Trigger: GTGTGGGTATGTGTGTAGCCATCCTCCTTCTTTGAA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTTTAGAGCTGTATTGTaGTCCTTATTCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFFRAVL*SLFRMM
Trigger: CATCATCCTGAATAAGGACCACAATACAGCTCTAAA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCTACGAATTGAGATCTaGTTTGAGTCTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFLRIEI*FESGEN
Trigger: ATTCTCACCAGACTCAAACCAGATCTCAATTCGTAG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATGTTGCAAGATGCCTaGCCCCACTTAAATAATTCC +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVMLQDA*PHLNNS
Trigger: GGAATTATTTAAGTGGGGCCAGGCATCTTGCAACAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
3UTR CAA 72 bp ATACGTTCTAGAGCTTCCATGCTCGGATTCTTTAATTaGGAGGTTAGTGACACAGTTTCAGATTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IRSRASMLGFFN*EVSDTVSDWVF
Trigger: AAAAACCCAATCTGAAACTGTGTCACTAACCTCCAAATTAAAGAATCCGAGCATGGAAGCTCTAGAACGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGTAATATGGCACTCTaGGCACATCAGTATCACTTC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPCNMAL*AHQYHF
Trigger: GAAGTGATACTGATGTGCTCAGAGTGCCATATTACA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCTATCTACTTGCCTTTaGCTAGTATCTGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFLSTCL*LVSGSK
Trigger: TTTAGATCCAGATACTAGTCAAAGGCAAGTAGATAG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATTAGAAGTTGCTATTaGCAAGGTATCTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVIRSCY*QGIWKT
Trigger: AGTCTTCCAGATACCTTGTCAATAGCAACTTCTAAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAAGTATGCCAAGTTCTaGCAGACACTGAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPKYAKF*QTLKRT
Trigger: GGTTCTTTTCAGTGTCTGTCAGAACTTGGCATACTT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAAGGCCAGAATCAGATaGAACTTTAAAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVKARIR*NFKGFE
Trigger: TTCAAAGCCTTTAAAGTTTCATCTGATTCTGGCCTT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR TCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAGAGTGATCAAGGTGTaGACATATCACTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFRVIKV*TYHCSF
Trigger: AAAACTACAGTGATATGTTCACACCTTGATCACTCT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR GCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAACCTGTTTCGTCCTCTaGTCACAAGAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPTCFVL*SQEIHR
Trigger: ACGATGAATTTCTTGTGAGCAGAGGACGAAACAGGT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATCTCACAAAGTTCTTaGGTTTCAAGAGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVISQSS*VSRECV
Trigger: AACACACTCTCTTGAAACCCAAGAACTTTGTGAGAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGCTTTGGATTGGGTGTaGATATTGGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPALDWV*ILASLS
Trigger: TGACAATGATGCCAATATCCACACCCAATCCAAAGC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTACTTACTGGGATATCTaGAATGGTTTCATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFTYWDI*NGFISF
Trigger: GAAAGAAATGAAACCATTCCAGATATCCCAGTAAGT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTTTAGAGCTGTATTGTaGTCCTTATTCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFFRAVL*SLFRMM
Trigger: CATCATCCTGAATAAGGACCACAATACAGCTCTAAA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACAACATTGCACTATCTaGCCAAAGAACTTGGACTAC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPQHCTI*PKNLDY
Trigger: GTAGTCCAAGTTCTTTGGCCAGATAGTGCAATGTTG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATGGGACGAAATATTTaGCCTTGGTCACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVMGRNI*PWSLST
Trigger: AGTTGAAAGTGACCAAGGCCAAATATTTCGTCCCAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR TCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATTAGAAGTTGCTATTaGCAAGGTATCTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVIRSCY*QGIWKT
Trigger: AGTCTTCCAGATACCTTGTCAATAGCAACTTCTAAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATCTCACAAAGTTCTTaGGTTTCAAGAGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVISQSS*VSRECV
Trigger: AACACACTCTCTTGAAACCCAAGAACTTTGTGAGAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACTGGGATATCTGGAATaGTTTCATTTCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPLGYLE*FHFFLW
Trigger: CCACAGAAAGAAATGAAACCATTCCAGATATCCCAG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAACTTACTGGGATATCTaGAATGGTTTCATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVTYWDI*NGFISF
Trigger: GAAAGAAATGAAACCATTCCAGATATCCCAGTAAGT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAAGGTGGAGTTGCTTTaGTTAAGACTAGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVKVELL*LRLVNP
Trigger: TGGATTAACTAGTCTTAACCAAAGCAACTCCACCTT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCATCACTGGAAATTCTTaGCTCATTAGAAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFITGNS*LIRSCY
Trigger: ATAGCAACTTCTAATGAGCCAAGAATTTCCAGTGAT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATCACTGGAAATTCTTaGCTCATTAGAAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVITGNS*LIRSCY
Trigger: ATAGCAACTTCTAATGAGCCAAGAATTTCCAGTGAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCATCTATATTGTTTCTaGACTGAAGACTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: LCILHLDIIVAATLDHTFHLYCF*TEDLFP
Trigger: AGGGAATAAGTCTTCAGTCCAGAAACAATATAGATG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAAAGGTCTACGTACTATaGAGAAAGTATGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPKVYVL*RKYAKF
Trigger: GAACTTGGCATACTTTCTCCATAGTACGTAGACCTT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTCGGATTCTTTAATTTaGAGGTTAGTGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSDSLI*RLVTQF
Trigger: AAACTGTGTCACTAACCTCCAAATTAAAGAATCCGA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
3UTR CAA 72 bp GCAGAACTAGTCTTTAGCACTTTGACTATATCAGAATaGAAAGCATATAAGCGTGTCACATTTGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AELVFSTLTISE*KAYKRVTFGRE
Trigger: TTCTCTTCCAAATGTGACACGCTTATATGCTTTCAATTCTGATATAGTCAAAGTGCTAAAGACTAGTTCTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAATCACTGGAAATTCTTaGCTCATTAGAAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPITGNS*LIRSCY
Trigger: ATAGCAACTTCTAATGAGCCAAGAATTTCCAGTGAT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACATCTATATTGTTTCTaGACTGAAGACTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPHLYCF*TEDLFP
Trigger: AGGGAATAAGTCTTCAGTCCAGAAACAATATAGATG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CCA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATCGGATTCTTTAATTTaGAGGTTAGTGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPSDSLI*RLVTQF
Trigger: AAACTGTGTCACTAACCTCCAAATTAAAGAATCCGA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS CCA 90 bp TCCAGCTGCGGTCAGGCGGCGGCTGCTGCTTCCGCGAGCCTCGTTTaGCCAGCCAGGACCCGGCCGTGCCCTCGCCCTCGTCCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSCGQAAAAASASLV*PARTRPCPRPRPCP
Trigger: TGGGCAAGGACGAGGGCGAGGGCACGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCGCAGCTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp CATATCTGCGGTCAGGCGGCGGCTGCTGCTTCCGCGAGCCTCGTTTaGCCAGCCAGGACCCGGCCGTGCCCTCGCCCTCGTCCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: HICGQAAAAASASLV*PARTRPCPRPRPCP
Trigger: TGGGCAAGGACGAGGGCGAGGGCACGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCGCAGATATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311921.8
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCCCTCGCCCTCGTCCTaGCCCACCTCTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAPSPSS*PTSLPA
Trigger: AGCCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGGG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGTATCGCTGTTGGGTaGGCACTGGGCGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHCIAVG*ALGVVL
Trigger: CAGGACAACGCCCAGTGCCAACCCAACAGCGATACA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCCGCGAGCCTCGTTaGGCCAGCCAGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPFREPR*ASQDPA
Trigger: GGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCCCTCGCCCTCGTCCTaGCCCACCTCTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFPSPSS*PTSLPA
Trigger: AGCCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGGG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTTCCGCGAGCCTCGTTaGGCCAGCCAGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFFREPR*ASQDPA
Trigger: GGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS TCA 90 bp GACACTGATAAGGCTGTCTCTGTCGATGGACTCGTAAGTGCTGCTTaGTGTAGCCCTTGTTGCCACTTGTGTAGTGACACAGGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: DTDKAVSVDGLVSAA*CSPCCHLCSDTGGN
Trigger: GTTGCCGCCTGTGTCACTACACAAGTGGCAACAAGGGCTACATCAAGCAGCACTTACGAGTCCATCGACAGAGACAGCCTTATCAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp CGACACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTGGATTaGGTGTGGATATTGGCATCATTGTCATGGTCATTCACCACGTGG +
Preference number: 5 (lower is better)
Translates to: RHKELEGLTHCWALD*VWILASLSWSFTTW
Trigger: CCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTACCCTCGCCCTCGTCCTaGCCCACCTCTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVPSPSS*PTSLPA
Trigger: AGCCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGGG...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGCACTGATGGCCCATaGTGGATACTCAGTTCACTC +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHCTDGP*WILSSL
Trigger: GAGTGAACTGAGTATCCACAATGGGCCATCAGTGCA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTGTTTCCGGACAAACTaGTATCGCTGTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHCFRTN*YRCWVG
Trigger: GCCAACCCAACAGCGATACAAGTTTGTCCGGAAACA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACTTCTGTGGCAGGAAGTaGTCTGACAGCGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHFCGRK*SDSVKV
Trigger: CACCTTTACGCTGTCAGACAACTTCCTGCCACAGAA...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACATTAGCATGATACTGTaGAACACTGGGACACCCGCC +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHISMIL*NTGTPA
Trigger: GGCGGGTGTCCCAGTGTTCAACAGTATCATGCTAAT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS CCA 90 bp TGGAGGGGCTTACGCACTGTTGGGCTTTGGATTGGGTGTGGATATTaGCATCATTGTCATGGTCATTCACCACGTGGGCTTCAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: WRGLRTVGLWIGCGY*HHCHGHSPRGLQVP
Trigger: AGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp AAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTGGATTGGGTGTaGATATTGGCATCATTGTCATGGTCATTCACCACGTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: KELEGLTHCWALDWV*ILASLSWSFTTWAS
Trigger: TGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACGTGGCGACATCATTTTaGAGTACGCTGCCAATGTAC +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHVATSF*STLPMY
Trigger: GTACATTGGCAGCGTACTCAAAAATGATGTCGCCAC...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS TCA 90 bp AAAGGGCTTTGCTTGCGGCTCTATTTGAGCTCCTGCGGTATCTGCTaGCATACCCATCAGCCTCGTTCTGTCTTCTTCACTGAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: KGLCLRLYLSSCGIC*HTHQPRSVFFTELD
Trigger: ATCCAACTCAGTGAAGAAGACAGAACGAGGCTGATGGGTATGTCAGCAGATACCGCAGGAGCTCAAATAGAGCCGCAAGCAAAGCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS GCA 90 bp TTTTCAATGACGGTGAGTAAGGACATGCTGATGCCTGTCTTAACCTaGCCATCTGACAATTCCTGCCTACCCTCTGGGAGTGCTACCAAG +
Preference number: 5 (lower is better)
Translates to: FSMTVSKDMLMPVLT*PSDNSCLPSGSATK
Trigger: CTTGGTAGCACTCCCAGAGGGTAGGCAGGAATTGTCAGATGGGCAGGTTAAGACAGGCATCAGCATGTCCTTACTCACCGTCATTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 90 bp CCGGACAAACTTGTATCGCTGTTGGGTTGGCACTGGGCGTTGTCCTaGAACTCTTTCAAAATGTCATCGTCTGAAGCGTTTTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PDKLVSLLGWHWALS*NSFKMSSSEAFWSV
Trigger: GACAGACCAAAACGCTTCAGACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp TCTGTGGTTTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTaGGCTTTGGATTGGGTGTGGATATTGGCATCATTGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: SVVFRHKELEGLTHC*ALDWVWILASLSWS
Trigger: TGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGGGGCTTACGCACTGTaGGGCTTTGGATTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAGAYAL*GFGLGV
Trigger: CACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATGTATCGCTGTTGGGTaGGCACTGGGCGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSCIAVG*ALGVVL
Trigger: CAGGACAACGCCCAGTGCCAACCCAACAGCGATACA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGACCTCTACTTCCTCTTaGACCCACTCCCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTATSTSS*THSPSL
Trigger: GAGTGAGGGGGAGTGGGTCAAAGAGGAAGTAGAGGT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS CCA 90 bp GCAGCAGGTGACTGGATTACTTTAGCCGGAATCTCACAAAGTTCTTaGGTTTCAAGAGAGTGTGTTGCAGCACTTGAACGTGGGCGTTTC +
Preference number: 5 (lower is better)
Translates to: AAGDWITLAGISQSS*VSRECVAALERGRF
Trigger: GAAACGCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAACCCAAGAACTTTGTGAGATTCCGGCTAAAGTAATCCAGTCACCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp CACTGTTGGGCTTTGGATTGGGTGTGGATATTGGCATCATTGTCATaGTCATTCACCACGTGGGCTTCAAGTTCCTCCTGGCTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: HCWALDWVWILASLS*SFTTWASSSSWLLD
Trigger: ATCTAGAAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp TTTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTaGATTGGGTGTGGATATTGGCATCATTGTCATGGTCATTCACCA +
Preference number: 5 (lower is better)
Translates to: FSDTKSWRGLRTVGL*IGCGYWHHCHGHSP
Trigger: TGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp ACCACATTGTTTCCGGACAAACTTGTATCGCTGTTGGGTTGGCACTaGGCGTTGTCCTGCAACTCTTTCAAAATGTCATCGTCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: TTLFPDKLVSLLGWH*ALSCNSFKMSSSEA
Trigger: CGCTTCAGACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGAGTGTGTTGCAGCACTaGAACGTGGGCGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTASVLQH*NVGVSS
Trigger: GGAAGAAACGCCCACGTTCAAGTGCTGCAACACACT...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGGGGCTTACGCACTGTaGGGCTTTGGATTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPGAYAL*GFGLGV
Trigger: CACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGGAAGAGACTCAGAATTaGTCCTTCTCCGGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAEETQN*SFSGLV
Trigger: CACCAGGCCGGAGAAGGACAAATTCTGAGTCTCTTC...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS TCA 90 bp GTCCTTCCCTTCTTCCATTTCAGTGTTCATGAGGAAGCGCTTCTGTaGAAGGGTTTCTTCAGCACTTGGCAATCGCTCCACTATCACGTT +
Preference number: 5 (lower is better)
Translates to: VLPFFHFSVHEEALL*KGFFSTWQSLHYHV
Trigger: AACGTGATAGTGGAGCGATTGCCAAGTGCTGAAGAAACCCTTTCACAGAAGCGCTTCCTCATGAACACTGAAATGGAAGAAGGGAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 90 bp GAACTTCCAGTGACGGGATCTGCACTCTCTTCACTGCTCTTTAATTaGGTCTTTCCAGGGGATTTCCCCAGAACTCTGCCACTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: ELPVTGSALSSLLFN*VFPGDFPRTLPLCE
Trigger: TTCACAAAGTGGCAGAGTTCTGGGGAAATCCCCTGGAAAGACTCAATTAAAGAGCAGTGAAGAGAGTGCAGATCCCGTCACTGGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS CCA 90 bp TGTCCACACTTACTGGGATATCTGGAATGGTTTCATTTCTTTCTGTaGTTTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTGGG +
Preference number: 5 (lower is better)
Translates to: CPHLLGYLEWFHFFL*FSDTKSWRGLRTVG
Trigger: CCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAACCACAGAAAGAAATGAAACCATTCCAGATATCCCAGTAAGTGTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp AACTGTTCTGAGCTGCAAATCTGCACTTGCACTGATGGCCCATTGTaGATACTCAGTTCACTCTCTCCAATAGCAATGACGACTGCATCG +
Preference number: 5 (lower is better)
Translates to: NCSELQICTCTDGPL*ILSSLSPIAMTTAS
Trigger: CGATGCAGTCGTCATTGCTATTGGAGAGAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp GAGCCAGTGTCTTTCAAATCAATTCCTGAAATTAATACAGTCCCTTaGATCAATCTTCAAAATCCAGCTGCGGTCAGGCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EPVSFKSIPEINTVP*INLQNPAAVRRRLL
Trigger: CAGCAGCCGCCGCCTGACCGCAGCTGGATTTTGAAGATTGATCCAAGGGACTGTATTAATTTCAGGAATTGATTTGAAAGACACTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCAGTGTGTTGCAGCACTaGAACGTGGGCGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASVLQH*NVGVSS
Trigger: GGAAGAAACGCCCACGTTCAAGTGCTGCAACACACT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTTTCAAGAGAGTGTGTaGCAGCACTTGAACGTGGGC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAFQESV*QHLNVG
Trigger: GCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGGGGCTTACGCACTGTaGGGCTTTGGATTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFGAYAL*GFGLGV
Trigger: CACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTGCACTGATGGCCCATaGTGGATACTCAGTTCACTC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTACTDGP*WILSSL
Trigger: GAGTGAACTGAGTATCCACAATGGGCCATCAGTGCA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAGCATTTCTTCCTCATaGGGGTCCAGGGTAACTGAC +
Preference number: 5 (lower is better)
Translates to: EERSRTKASVGVTTLHYLSISSS*GSRVTD
Trigger: GTCAGTTACCCTGGACCCCAATGAGGAAGAAATGCT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTGTTTCCGGACAAACTaGTATCGCTGTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTACFRTN*YRCWVG
Trigger: GCCAACCCAACAGCGATACAAGTTTGTCCGGAAACA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAGCCCTTGTTGCCACTaGTGTAGTGACACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSPCCH*CSDTGG
Trigger: GCCGCCTGTGTCACTACACAAGTGGCAACAAGGGCT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHNYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGGGGGATATGATTATGTaGTCCCTGGGAAGCATGGGA +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTAGDMIM*SLGSMG
Trigger: TCCCATGCTTCCCAGGGACAACATAATCATATCCCC...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TTCGGAAATAGCACCGTGAGGATGGTGCACAGAAGAGCGCACCGACCTTTTCACCTCGGATTCTTTAATTaGGAGGTTAGTGACACAGTT +
Preference number: 5 (lower is better)
Translates to: FGNSTVRMVHRRAHRPFHLGFFN*EVSDTV
Trigger: AACTGTGTCACTAACCTCCAAATTAAAGAATCCGAG...GTGAAAAGGTCGGTGCGCTCTTCTGTGCACCATCCTCACGGTGCTATTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS CCA 90 bp GCATCATTGTCATGGTCATTCACCACGTGGGCTTCAAGTTCCTCCTaGCTTCTAGATGTAATATGGCACTCTGAGCACATCAGTATCACT +
Preference number: 5 (lower is better)
Translates to: ASLSWSFTTWASSSS*LLDVIWHSEHISIT
Trigger: AGTGATACTGATGTGCTCAGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp GATTGGGTGTGGATATTGGCATCATTGTCATGGTCATTCACCACGTaGGCTTCAAGTTCCTCCTGGCTTCTAGATGTAATATGGCACTCT +
Preference number: 5 (lower is better)
Translates to: DWVWILASLSWSFTT*ASSSSWLLDVIWHS
Trigger: AGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp TATTCCACCACATTGTTTCCGGACAAACTTGTATCGCTGTTGGGTTaGCACTGGGCGTTGTCCTGCAACTCTTTCAAAATGTCATCGTCT +
Preference number: 5 (lower is better)
Translates to: YSTTLFPDKLVSLLG*HWALSCNSFKMSSS
Trigger: AGACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp GGATGTATTCCACCACATTGTTTCCGGACAAACTTGTATCGCTGTTaGGTTGGCACTGGGCGTTGTCCTGCAACTCTTTCAAAATGTCAT +
Preference number: 5 (lower is better)
Translates to: GCIPPHCFRTNLYRC*VGTGRCPATLSKCH
Trigger: ATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAAGTGTGTTGCAGCACTaGAACGTGGGCGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSVLQH*NVGVSS
Trigger: GGAAGAAACGCCCACGTTCAAGTGCTGCAACACACT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAACGCACTGTTGGGCTTaGGATTGGGTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSTHCWA*DWVWIL
Trigger: CAATATCCACACCCAATCCAAAGCCCAACAGTGCGT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCACGCACTGTTGGGCTTaGGATTGGGTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSATHCWA*DWVWIL
Trigger: CAATATCCACACCCAATCCAAAGCCCAACAGTGCGT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGCCCCAGGTTGGCTCTaGTCAACTCTGCAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFAPGWL*STLQLL
Trigger: TAAGAGCTGCAGAGTTGACAAGAGCCAACCTGGGGC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCAGCCCTTGTTGCCACTaGTGTAGTGACACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSPCCH*CSDTGG
Trigger: GCCGCCTGTGTCACTACACAAGTGGCAACAAGGGCT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCTCCAAATCTTTGCTGTaGTCCGCTATGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSASKSLL*SAMCSQ
Trigger: CTGCGAGCACATAGCGGACAACAGCAAAGATTTGGA...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGTTACAGTGTTCCAAGTaGATCGGTCACAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: EERSRTKASVGVTTLHYLLQCSK*IGHSLI
Trigger: GATGAGGCTGTGACCGATCAACTTGGAACACTGTAA...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTTACAGTGTTCCAAGTaGATCGGTCACAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTALQCSK*IGHSLI
Trigger: GATGAGGCTGTGACCGATCAACTTGGAACACTGTAA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATTAGCATGATACTGTaGAACACTGGGACACCCGCC +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSISMIL*NTGTPA
Trigger: GGCGGGTGTCCCAGTGTTCAACAGTATCATGCTAAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp CACTGCTTGCACTGGTATATTCTTGTCTTACAGTGGTGGATCATGTaGCTCTCCAAATCTTTGCTGTTGTCCGCTATGTGCTCGCAGATA +
Preference number: 5 (lower is better)
Translates to: HCLHWYILVLQWWIM*LSKSLLLSAMCSQI
Trigger: TATCTGCGAGCACATAGCGGACAACAGCAAAGATTTGGAGAGTCACATGATCCACCACTGTAAGACAAGAATATACCAGTGCAAGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAACGCACTGTTGGGCTTaGGATTGGGTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPTHCWA*DWVWIL
Trigger: CAATATCCACACCCAATCCAAAGCCCAACAGTGCGT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGCCCCAGGTTGGCTCTaGTCAACTCTGCAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFAPGWL*STLQLL
Trigger: TAAGAGCTGCAGAGTTGACAAGAGCCAACCTGGGGC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAAACTTGTATCGCTGTaGGGTTGGCACTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFKLVSL*GWHWAL
Trigger: CAACGCCCAGTGCCAACCCAACAGCGATACAAGTTT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAGCCCTTGTTGCCACTaGTGTAGTGACACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSPCCH*CSDTGG
Trigger: GCCGCCTGTGTCACTACACAAGTGGCAACAAGGGCT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATCCAAATCTTTGCTGTaGTCCGCTATGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPSKSLL*SAMCSQ
Trigger: CTGCGAGCACATAGCGGACAACAGCAAAGATTTGGA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCTGTGGCAGGAAGTaGTCTGACAGCGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPFCGRK*SDSVKV
Trigger: CACCTTTACGCTGTCAGACAACTTCCTGCCACAGAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCACCTCTACTTCCTCTTaGACCCACTCCCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFTSTSS*THSPSL
Trigger: GAGTGAGGGGGAGTGGGTCAAAGAGGAAGTAGAGGT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGTCGGTGTCACAACATaGCACTATCTGGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSVGVTT*HYLAKE
Trigger: TTCTTTGGCCAGATAGTGCAATGTTGTGACACCGAC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTCGGTGTCACAACATaGCACTATCTGGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVGVTT*HYLAKE
Trigger: TTCTTTGGCCAGATAGTGCAATGTTGTGACACCGAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGAAGCCTGCTTGTCTTaGTCAAGCCAATTACAGCAC +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSEACLS*SSQLQH
Trigger: GTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp CATTTCCTCCTACCCATTTCTGCCACAGATGCAGTTTGGACAGTATaGGTCTGTAGATTGTCCACACTTACTGGGATATCTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: HFLLPISATDAVWTV*VCRLSTLTGISGMV
Trigger: AACCATTCCAGATATCCCAGTAAGTGTGGACAATCTACAGACTCATACTGTCCAAACTGCATCTGTGGCAGAAATGGGTAGGAGGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 90 bp ATCACTTCTAGCATTTCTTCCTCATTGGGGTCCAGGGTAACTGACTaGCTTAGGTGTACTCCTCTTTCTGCACTCTGTTCTAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: ITSSISSSLGSRVTD*LRCTPLSALCSKGD
Trigger: ATCTCCTTTAGAACAGAGTGCAGAAAGAGGAGTACACCTAAGTCAGTCAGTTACCCTGGACCCCAATGAGGAAGAAATGCTAGAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 90 bp CTGCACTCTGTTCTAAAGGAGATGAAGATGATAACTGTTCTGAGCTaGAAATCTGCACTTGCACTGATGGCCCATTGTGGATACTCAGTT +
Preference number: 5 (lower is better)
Translates to: LHSVLKEMKMITVLS*KSALALMAHCGYSV
Trigger: AACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATCATCTTCATCTCCTTTAGAACAGAGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp GTTATGACTGACATGAATATGCAGCTCTCCGAAACGCAGGAGACATaGATCCAACGAAAAGTAGCCATGTTACTAAACTCACTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: VMTDMNMQLSETQET*IQRKVAMLLNSLCN
Trigger: GTTGCAGAGTGAGTTTAGTAACATGGCTACTTTTCGTTGGATCCATGTCTCCTGCGTTTCGGAGAGCTGCATATTCATGTCAGTCATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCTGTTGGGCTTTGGATaGGGTGTGGATATTGGCATC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFLLGFG*GVDIGI
Trigger: GATGCCAATATCCACACCCAATCCAAAGCCCAACAG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAGCATTTCTTCCTCATaGGGGTCCAGGGTAACTGAC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFSISSS*GSRVTD
Trigger: GTCAGTTACCCTGGACCCCAATGAGGAAGAAATGCT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGAAGAGACTCAGAATTaGTCCTTCTCCGGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFEETQN*SFSGLV
Trigger: CACCAGGCCGGAGAAGGACAAATTCTGAGTCTCTTC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGCTACCAAGGTGGAGTaGCTTTGGTTAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSATKVE*LWLRLV
Trigger: AACTAGTCTTAACCAAAGCAACTCCACCTTGGTAGC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGGTTGGCACTGGGCGTaGTCCTGCAACTCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVGWHWA*SCNSFK
Trigger: TTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGTATCGCTGTTGGGTaGGCACTGGGCGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPCIAVG*ALGVVL
Trigger: CAGGACAACGCCCAGTGCCAACCCAACAGCGATACA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAAACTTGTATCGCTGTaGGGTTGGCACTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVKLVSL*GWHWAL
Trigger: CAACGCCCAGTGCCAACCCAACAGCGATACAAGTTT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTGCACTGGTATATTCTaGTCTTACAGTGGTGGATCA +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTACTGIF*SYSGGS
Trigger: TGATCCACCACTGTAAGACAAGAATATACCAGTGCA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS TCA 90 bp GTGGGCTTCAAGTTCCTCCTGGCTTCTAGATGTAATATGGCACTCTaGGCACATCAGTATCACTTCATTTTGCTGACCATGTTGCTTAAT +
Preference number: 5 (lower is better)
Translates to: VGFKFLLASRCNMAL*AHQYHFILLTMLLN
Trigger: ATTAAGCAACATGGTCAGCAAAATGAAGTGATACTGATGTGCTCAGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 90 bp TTCTCTGCTGGCCACAAGTATAACTACAAAACAAGCATCGATACATaGCGTACTGTTCGTATGCATACCATTTCCTCCTACCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: FSAGHKYNYKTSIDT*RTVRMHTISSYPFL
Trigger: CAGAAATGGGTAGGAGGAAATGGTATGCATACGAACAGTACGGCATGTATCGATGCTTGTTTTGTAGTTATACTTGTGGCCAGCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 90 bp AAAGGAGATGAAGATGATAACTGTTCTGAGCTGCAAATCTGCACTTaGACTGATGGCCCATTGTGGATACTCAGTTCACTCTCTCCAATA +
Preference number: 5 (lower is better)
Translates to: KGDEDDNCSELQICT*TDGPLWILSSLSPI
Trigger: TATTGGAGAGAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATCATCTTCATCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 90 bp TGTTCTAAAGGAGATGAAGATGATAACTGTTCTGAGCTGCAAATCTaGACTTGCACTGATGGCCCATTGTGGATACTCAGTTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: CSKGDEDDNCSELQI*TCTDGPLWILSSLS
Trigger: AGAGAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATCATCTTCATCTCCTTTAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp TTTGTTTGTGACATCTCAGCCCTTCTAGTATCAGCAGCAGGTGACTaGATTACTTTAGCCGGAATCTCACAAAGTTCTTGGGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: FVCDISALLVSAAGD*ITLAGISQSSWVSR
Trigger: TCTTGAAACCCAAGAACTTTGTGAGATTCCGGCTAAAGTAATCCAGTCACCTGCTGCTGATACTAGAAGGGCTGAGATGTCACAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp CAGTATGAGTCTGTAGATTGTCCACACTTACTGGGATATCTGGAATaGTTTCATTTCTTTCTGTGGTTTTCCGACACAAAGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QYESVDCPHLLGYLE*FHFFLWFSDTKSWR
Trigger: CCTCCAGCTCTTTGTGTCGGAAAACCACAGAAAGAAATGAAACCATTCCAGATATCCCAGTAAGTGTGGACAATCTACAGACTCATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 90 bp CACAGAGAGCATCTGAACTCTTTCCTGTACGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTGACACCAACATATGTTGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: HREHLNSFLYGLSEL*IRLWFLTPTYVVLV
Trigger: TACAAGTACAACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGTACAGGAAAGAGTTCAGATGCTCTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCTGTTGGGCTTTGGATaGGGTGTGGATATTGGCATC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFLLGFG*GVDIGI
Trigger: GATGCCAATATCCACACCCAATCCAAAGCCCAACAG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATGCACTGATGGCCCATaGTGGATACTCAGTTCACTC +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVCTDGP*WILSSL
Trigger: GAGTGAACTGAGTATCCACAATGGGCCATCAGTGCA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGCCCCAGGTTGGCTCTaGTCAACTCTGCAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPAPGWL*STLQLL
Trigger: TAAGAGCTGCAGAGTTGACAAGAGCCAACCTGGGGC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGTGGCGACATCATTTTaGAGTACGCTGCCAATGTAC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFVATSF*STLPMY
Trigger: GTACATTGGCAGCGTACTCAAAAATGATGTCGCCAC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAAACTTGTATCGCTGTaGGGTTGGCACTGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVKLVSL*GWHWAL
Trigger: CAACGCCCAGTGCCAACCCAACAGCGATACAAGTTT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCATGCACTGGTATATTCTaGTCTTACAGTGGTGGATCA +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSCTGIF*SYSGGS
Trigger: TGATCCACCACTGTAAGACAAGAATATACCAGTGCA...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCGTGTTTAGAGCTGTATaGTGGTCCTTATTCAGGATG +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAVFRAV*WSLFRM
Trigger: CATCCTGAATAAGGACCACAATACAGCTCTAAACAC...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GAAGAAAGATCCAGAACAAAGGCTTCGGTCGGTGTCACAACATTGCACTATCTGAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 5 (lower is better)
Translates to: EERSRTKASVGVTTLHYLNYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...CAGATAGTGCAATGTTGTGACACCGACCGAAGCCTTTGTTCTGGATCTTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTTTACAGTGTTCCAAGTaGATCGGTCACAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFLQCSK*IGHSLI
Trigger: GATGAGGCTGTGACCGATCAACTTGGAACACTGTAA...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGAAGCCTGCTTGTCTTaGTCAAGCCAATTACAGCAC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFEACLS*SSQLQH
Trigger: GTGCTGTAATTGGCTTGACAAAGACAAGCAGGCTTC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAAACAGAGAAGCCTGCTaGTCTTTGTCAAGCCAATTA +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSNREAC*SLSSQL
Trigger: TAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp CTGAAACATGCCCTAAGGTATCTGTGCTATCTGAATGGCAGAGACTaGGGATCACAGAGGCACAAATCTCTCTTCTTGTTTAACAAGTTT +
Preference number: 5 (lower is better)
Translates to: LKHALRYLCYLNGRD*GSQRHKSLFLFNKF
Trigger: AAACTTGTTAAACAAGAAGAGAGATTTGTGCCTCTGTGATCCTCAGTCTCTGCCATTCAGATAGCACAGATACCTTAGGGCATGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS TCA 90 bp ACGAAAAGTAGCCATGTTACTAAACTCACTCTGCAACAACAGGGCTaGGTAATTCAAGTTGGGGTAAGCTTATGTCAACACGAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: TKSSHVTKLTLQQQG*VIQVGVSLCQHELS
Trigger: ACTCAACTCGTGTTGACATAAGCTTACCCCAACTTGAATTACTCAGCCCTGTTGTTGCAGAGTGAGTTTAGTAACATGGCTACTTTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS GCA 90 bp AGTATAACTACAAAACAAGCATCGATACATGCCGTACTGTTCGTATaGATACCATTTCCTCCTACCCATTTCTGCCACAGATGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SITTKQASIHAVLFV*IPFPPTHFCHRCSL
Trigger: CAAACTGCATCTGTGGCAGAAATGGGTAGGAGGAAATGGTATGCATACGAACAGTACGGCATGTATCGATGCTTGTTTTGTAGTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGATTGGGTGTGGATATaGGCATCATTGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFDWVWI*ASLSWS
Trigger: TGACCATGACAATGATGCCAATATCCACACCCAATC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTAGCATTTCTTCCTCATaGGGGTCCAGGGTAACTGAC +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSISSS*GSRVTD
Trigger: GTCAGTTACCCTGGACCCCAATGAGGAAGAAATGCT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCCAATGTACTATCTACTaGCCTTTGACTAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAQCTIY*PLTSIW
Trigger: CCAGATACTAGTCAAAGGCAAGTAGATAGTACATTG...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGTGGCGACATCATTTTaGAGTACGCTGCCAATGTAC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFVATSF*STLPMY
Trigger: GTACATTGGCAGCGTACTCAAAAATGATGTCGCCAC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGCTACCAAGGTGGAGTaGCTTTGGTTAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFATKVE*LWLRLV
Trigger: AACTAGTCTTAACCAAAGCAACTCCACCTTGGTAGC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGGTTGGCACTGGGCGTaGTCCTGCAACTCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPGWHWA*SCNSFK
Trigger: TTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GATATGATTATGTTGTCCCTGGGAAGCATGGGACGAAATATTTGGCCTTGGTCAATGTATTCCACCACATaGTTTCCGGACAAACTTGTA +
Preference number: 5 (lower is better)
Translates to: DMIMLSLGSMGRNIWPWSMYSTT*FPDKLV
Trigger: TACAAGTTTGTCCGGAAACAATGTGGTGGAATACAT...TGACCAAGGCCAAATATTTCGTCCCATGCTTCCCAGGGACAACATAATCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATGATAATGGGAAGGGAAAGAACCTCCTTGATATATGCTTCCTCCTATCGGCCATGTATTCCACCACATaGTTTCCGGACAAACTTGTA +
Preference number: 5 (lower is better)
Translates to: NDNGKGKNLLDICFLLSAMYSTT*FPDKLV
Trigger: TACAAGTTTGTCCGGAAACAATGTGGTGGAATACAT...GGCCGATAGGAGGAAGCATATATCAAGGAGGTTCTTTCCCTTCCCATTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTTCCAAATCTTTGCTGTaGTCCGCTATGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVSKSLL*SAMCSQ
Trigger: CTGCGAGCACATAGCGGACAACAGCAAAGATTTGGA...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGTGTTTAGAGCTGTATaGTGGTCCTTATTCAGGATG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPVFRAV*WSLFRM
Trigger: CATCCTGAATAAGGACCACAATACAGCTCTAAACAC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCCTCAAAAATCACATCAACGACTTCTTCTGTGGCAGGAAGTTGTCTGACAGCGTCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: SSKITSTTSSVAGSCLTASNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...CGCTGTCAGACAACTTCCTGCCACAGAAGAAGTCGTTGATGTGATTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAATAAGCGTGTCACATTaGGAAGAGAAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPISVSH*EEKLNW
Trigger: CCAGTTCAGTTTCTCTTCCAAATGTGACACGCTTAT...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTCATGGGACGAAATATTaGGCCTTGGTCACTTTCAAC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFHGTKY*ALVTFN
Trigger: GTTGAAAGTGACCAAGGCCAAATATTTCGTCCCATG...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp AGCATCTGTACGGCTTATCAGAGTTATGGATTCGCCTGTGGTTTCTaGCACCAACATATGTTGTACTTGTATAATCACACACATCACATC +
Preference number: 5 (lower is better)
Translates to: SICTAYQSYGFACGF*HQHMLYLYNHTHHI
Trigger: GATGTGATGTGTGTGATTATACAAGTACAACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGTACAGATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp CTTTCCTGTACGGCTTATCAGAGTTATGGATTCGCCTGTGGTTTCTaGCACCAACATATGTTGTACTTGTATAATCACACACATCACATC +
Preference number: 5 (lower is better)
Translates to: LSCTAYQSYGFACGF*HQHMLYLYNHTHHI
Trigger: GATGTGATGTGTGTGATTATACAAGTACAACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGTACAGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544431.5
CDS GCA 90 bp GGTTCCTCAATTGACTCTTATAATGGAAGGATTCTTCACACTGCTTaGACTGGTATATTCTTGTCTTACAGTGGTGGATCATGTGACTCT +
Preference number: 5 (lower is better)
Translates to: GSSIDSYNGRILHTA*TGIFLSYSGGSCDS
Trigger: AGAGTCACATGATCCACCACTGTAAGACAAGAATATACCAGTGCAAGCAGTGTGAAGAATCCTTCCATTATAAGAGTCAATTGAGGAACC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATTTCAAGAGAGTGTGTaGCAGCACTTGAACGTGGGC +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPFQESV*QHLNVG
Trigger: GCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCACAATGTACTATCTACTaGCCTTTGACTAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPQCTIY*PLTSIW
Trigger: CCAGATACTAGTCAAAGGCAAGTAGATAGTACATTG...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGTTTCCGGACAAACTaGTATCGCTGTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPCFRTN*YRCWVG
Trigger: GCCAACCCAACAGCGATACAAGTTTGTCCGGAAACA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAATCTGGCCAAAGAACTaGGACTACCGATCAAATGGA +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVIWPKN*DYRSNG
Trigger: TCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGAT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCATGGGACGAAATATTaGGCCTTGGTCACTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFHGTKY*ALVTFN
Trigger: GTTGAAAGTGACCAAGGCCAAATATTTCGTCCCATG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTGATTGGGTGTGGATATaGGCATCATTGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVDWVWI*ASLSWS
Trigger: TGACCATGACAATGATGCCAATATCCACACCCAATC...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTGCTACCAAGGTGGAGTaGCTTTGGTTAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVATKVE*LWLRLV
Trigger: AACTAGTCTTAACCAAAGCAACTCCACCTTGGTAGC...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCAGGTTTTCTTTGCTGGTaGATTCAAAACCACAAATAC +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPGFLCW*IQNHKY
Trigger: GTATTTGTGGTTTTGAATCAACCAGCAAAGAAAACC...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTAATTATGTTTCCTTGTaGACTCTGTTGGTGACACTG +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFNYVSL*TLLVTL
Trigger: CAGTGTCACCAACAGAGTCAACAAGGAAACATAATT...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTATCTGGCCAAAGAACTaGGACTACCGATCAAATGGA +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVIWPKN*DYRSNG
Trigger: TCCATTTGATCGGTAGTCCAAGTTCTTTGGCCAGAT...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTAAACAGAGAAGCCTGCTaGTCTTTGTCAAGCCAATTA +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVNREAC*SLSSQL
Trigger: TAATTGGCTTGACAAAGACAAGCAGGCTTCTCTGTT...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTTAAGGCATGCAGCTaGATGTGCAGGATAATTTTA +
Preference number: 5 (lower is better)
Translates to: YLDFRNRILLKTCLQRIPFKACS*MCRIIL
Trigger: TAAAATTATCCTGCACATCAAGCTGCATGCCTTAAA...TGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp CCACCTAATTTGTGTTTAGAGCTGTATTGTGGTCCTTATTCAGGATaGTGTTTACAATTTCACCCTCGTGCTCTTTCATATGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: PPNLCLELYCGPYSG*CLQFHPRALSYDPR
Trigger: TCTTGGATCATATGAAAGAGCACGAGGGTGAAATTGTAAACATCATCCTGAATAAGGACCACAATACAGCTCTAAACACAAATTAGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS CCA 90 bp AACACTGCTACTTTCTTCCATATCCAAGGTTACATGGCTGTTAAGTaGCAGAGCCAGTGTCTTTCAAATCAATTCCTGAAATTAATACAG +
Preference number: 5 (lower is better)
Translates to: NTATFFHIQGYMAVK*QSQCLSNQFLKLIQ
Trigger: CTGTATTAATTTCAGGAATTGATTTGAAAGACACTGGCTCTGCCACTTAACAGCCATGTAACCTTGGATATGGAAGAAAGTAGCAGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCCAATGTACTATCTACTaGCCTTTGACTAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFQCTIY*PLTSIW
Trigger: CCAGATACTAGTCAAAGGCAAGTAGATAGTACATTG...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCATGTATTCCACCACATaGTTTCCGGACAAACTTGTA +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFMYSTT*FPDKLV
Trigger: TACAAGTTTGTCCGGAAACAATGTGGTGGAATACAT...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp GGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCCCATTCGAAAACCTTTGGTTTTCTTTGCTGGTaGATTCAAAACCACAAATAC +
Preference number: 5 (lower is better)
Translates to: GTEYFLKRAYSVSHSKTFGFLCW*IQNHKY
Trigger: GTATTTGTGGTTTTGAATCAACCAGCAAAGAAAACC...AAAGGTTTTCGAATGGGATACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTGAATTGAGATCTGGTTaGAGTCTGGTGAGAATTCAC +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVELRSG*SLVRIH
Trigger: GTGAATTCTCACCAGACTCAAACCAGATCTCAATTC...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS CCA 90 bp GTCACCCCAATATGTCTTATCTCCCATAAACATTATGTGCCACACTaGAGACATTTAAAGTATATCAATTTAAGTGAGCTGAACCAAAGC +
Preference number: 5 (lower is better)
Translates to: VTPICLISHKHYVPH*RHLKYINLSELNQS
Trigger: GCTTTGGTTCAGCTCACTTAAATTGATATACTTTAAATGTCTCCAGTGTGGCACATAATGTTTATGGGAGATAAGACATATTGGGGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCATGCACTGGTATATTCTaGTCTTACAGTGGTGGATCA +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPCTGIF*SYSGGS
Trigger: TGATCCACCACTGTAAGACAAGAATATACCAGTGCA...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCGGTTTTCTTTGCTGGTaGATTCAAAACCACAAATAC +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFGFLCW*IQNHKY
Trigger: GTATTTGTGGTTTTGAATCAACCAGCAAAGAAAACC...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAGTGTTTAGAGCTGTATaGTGGTCCTTATTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPVFRAV*WSLFRM
Trigger: CATCCTGAATAAGGACCACAATACAGCTCTAAACAC...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACCTCACAGTCTGCATTaGACAAGTGAGAAGAAAACT +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPPHSLH*TSEKKT
Trigger: AGTTTTCTTCTCACTTGTCAAATGCAGACTGTGAGG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTATGTATTTTACACTTAGATATTATAGTGGCTGCCACACTGGACCATACGTTCTCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LCILHLDIIVAATLDHTFSNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...GAACGTATGGTCCAGTGTGGCAGCCACTATAATATCTAAGTGTAAAATACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp AATCATACCTGGACTTTAGGAACAGAATACTTCTTAAAACGTGCCTACAGCGTATCTAATTATGTTTCCTaGTTGACTCTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: NHTWTLGTEYFLKRAYSVSNYVS*LTLLVT
Trigger: TGTCACCAACAGAGTCAACAAGGAAACATAATTAGA...TACGCTGTAGGCACGTTTTAAGAAGTATTCTGTTCCTAAAGTCCAGGTATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCAATAAGCGTGTCACATTaGGAAGAGAAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPISVSH*EEKLNW
Trigger: CCAGTTCAGTTTCTCTTCCAAATGTGACACGCTTAT...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCTCGGATTCTTTAATTaGGAGGTTAGTGACACAGTT +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVLGFFN*EVSDTV
Trigger: AACTGTGTCACTAACCTCCAAATTAAAGAATCCGAG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 90 bp ACATTATGTGCCACACTGGAGACATTTAAAGTATATCAATTTAAGTaGGCTGAACCAAAGCGGCACAGCTTAGTACACTTTATCCTTAAT +
Preference number: 5 (lower is better)
Translates to: TLCATLETFKVYQFK*AEPKRHSLVHFILN
Trigger: ATTAAGGATAAAGTGTACTAAGCTGTGCCGCTTTGGTTCAGCTCACTTAAATTGATATACTTTAAATGTCTCCAGTGTGGCACATAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS TCA 90 bp CTGAGTAATTCAAGTTGGGGTAAGCTTATGTCAACACGAGTTGAGTaGCTTGATCATATAAAACGATTTCTTGAAGATATTCAACGCTTC +
Preference number: 5 (lower is better)
Translates to: LSNSSWGKLMSTRVE*LDHIKRFLEDIQRF
Trigger: GAAGCGTTGAATATCTTCAAGAAATCGTTTTATATGATCAAGTCACTCAACTCGTGTTGACATAAGCTTACCCCAACTTGAATTACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS-3UTR CAA 90 bp TCATTTAGCAGAGTATTAGAAGGTCTACGTACTATGGAGAAAGTATGCCAAGTTCAGTATCACTTCATTTaGCTGACCATGTTGCTTAAT +
Preference number: 5 (lower is better)
Translates to: SFSRVLEGLRTMEKVCQVQYHFI*LTMLLN
Trigger: ATTAAGCAACATGGTCAGCAAAATGAAGTGATACTG...AACTTGGCATACTTTCTCCATAGTACGTAGACCTTCTAATACTCTGCTAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS TCA 90 bp TTATTCAGGATGATGTTTACAATTTCACCCTCGTGCTCTTTCATATaGTCCAAGAGGTTTTCTTTGCTGGTTGATTCAAAACCACAAATA +
Preference number: 5 (lower is better)
Translates to: LFRMMFTISPSCSFI*SKRFSLLVDSKPQI
Trigger: TATTTGTGGTTTTGAATCAACCAGCAAAGAAAACCTCTTGGATCATATGAAAGAGCACGAGGGTGAAATTGTAAACATCATCCTGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS-3UTR CAA 90 bp CTTTGTGTTGGTTTTCCATATGTCCTATCGCACTCTAACAAAATAGAATTTCCACAGTATCACTTCATTTaGCTGACCATGTTGCTTAAT +
Preference number: 5 (lower is better)
Translates to: LCVGFPYVLSHSNKIEFPQYHFI*LTMLLN
Trigger: ATTAAGCAACATGGTCAGCAAAATGAAGTGATACTG...TGGAAATTCTATTTTGTTAGAGTGCGATAGGACATATGGAAAACCAACACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS GCA 72 bp TCCGCGAGCCTCGTTTGGCCAGCCAGGACCCGGCCGTaGCCTCGCCCTCGTCCTTGCCCACCTCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SASLVWPARTRP*PRPRPCPPLSR
Trigger: CCGGGAGAGAGGTGGGCAAGGACGAGGGCGAGGGCACGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp ATCCAGCTGCGGTCAGGCGGCGGCTGCTGCTTCCGCGAGCCTCGTTaGGCCAGCCAGGACCCGGCCGTGCCCTCGCCCTCGTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: IQLRSGGGCCFREPR*ASQDPAVPSPSSLP
Trigger: GGGCAAGGACGAGGGCGAGGGCACGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCGCAGCTGGAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp CCATATCTGCGGTCAGGCGGCGGCTGCTGCTTCCGCGAGCCTCGTTaGGCCAGCCAGGACCCGGCCGTGCCCTCGCCCTCGTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: PYLRSGGGCCFREPR*ASQDPAVPSPSSLP
Trigger: GGGCAAGGACGAGGGCGAGGGCACGGCCGGGTCCTGGCTGGCCAAACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCGCAGATATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311921.8
CDS GCA 72 bp TGCTACTTTCTTCCATATCTGCGGTCAGGCGGCGGCTaGTGCTTCCGCGAGCCTCGTTTGGCCAGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: CYFLPYLRSGGG*CFREPRLASQD
Trigger: GTCCTGGCTGGCCAAACGAGGCTCGCGGAAGCAGCAGCCGCCGCCTGACCGCAGATATGGAAGAAAGTAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311921.8
CDS GCA 72 bp CCTGTTCCCCAATATCTGGCACCAACATGGCAACACTaGTACTTTCTTCCATATCTGCGGTCAGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PVPQYLAPTWQH*YFLPYLRSGGG
Trigger: GCCGCCGCCTGACCGCAGATATGGAAGAAAGTAGCAGTGTTGCCATGTTGGTGCCAGATATTGGGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311921.8
CDS GCA 72 bp ACGGTGAGTAAGGACATGCTGATGCCTGTCTTAACCTaGCCATCTGACAATTCCTGCCTACCCTCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: TVSKDMLMPVLT*PSDNSCLPSGS
Trigger: ACTCCCAGAGGGTAGGCAGGAATTGTCAGATGGGCAGGTTAAGACAGGCATCAGCATGTCCTTACTCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp CTGGAGGGGCTTACGCACTGTTGGGCTTTGGATTGGGTGTGGATATaGGCATCATTGTCATGGTCATTCACCACGTGGGCTTCAAGTTCC +
Preference number: 6 (lower is better)
Translates to: LEGLTHCWALDWVWI*ASLSWSFTTWASSS
Trigger: GGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp CCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTGGATaGGGTGTGGATATTGGCATCATTGTCATGGTCATTCACCACGTG +
Preference number: 6 (lower is better)
Translates to: PTQRAGGAYALLGFG*GVDIGIIVMVIHHV
Trigger: CACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp TGCTTGCGGCTCTATTTGAGCTCCTGCGGTATCTGCTaGCATACCCATCAGCCTCGTTCTGTCTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: CLRLYLSSCGIC*HTHQPRSVFFT
Trigger: AGTGAAGAAGACAGAACGAGGCTGATGGGTATGTCAGCAGATACCGCAGGAGCTCAAATAGAGCCGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS CCA 72 bp GAGGGGCTTACGCACTGTTGGGCTTTGGATTGGGTGTaGATATTGGCATCATTGTCATGGTCATTCACCACG +
Preference number: 6 (lower is better)
Translates to: EGLTHCWALDWV*ILASLSWSFTT
Trigger: CGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp GAGCTGGAGGGGCTTACGCACTGTTGGGCTTTGGATTaGGTGTGGATATTGGCATCATTGTCATGGTCATTC +
Preference number: 6 (lower is better)
Translates to: ELEGLTHCWALD*VWILASLSWSF
Trigger: GAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTaGGCTTTGGATTGGGTGTGGATATTGGCATCATTG +
Preference number: 6 (lower is better)
Translates to: FRHKELEGLTHC*ALDWVWILASL
Trigger: CAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp CCACCACATTGTTTCCGGACAAACTTGTATCGCTGTTaGGTTGGCACTGGGCGTTGTCCTGCAACTCTTTCA +
Preference number: 6 (lower is better)
Translates to: PPHCFRTNLYRC*VGTGRCPATLS
Trigger: TGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp CACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTaGGATTGGGTGTGGATATTGGCATCATTGTCATGG +
Preference number: 6 (lower is better)
Translates to: HKELEGLTHCWA*DWVWILASLSW
Trigger: CCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp TCCACCACATTGTTTCCGGACAAACTTGTATCGCTGTaGGGTTGGCACTGGGCGTTGTCCTGCAACTCTTTC +
Preference number: 6 (lower is better)
Translates to: STTLFPDKLVSL*GWHWALSCNSF
Trigger: GAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp TCGGGATGTATTCCACCACATTGTTTCCGGACAAACTaGTATCGCTGTTGGGTTGGCACTGGGCGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SGCIPPHCFRTN*YRCWVGTGRCP
Trigger: AGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATACATCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp CTTACGCACTGTTGGGCTTTGGATTGGGTGTGGATATTGGCATCATaGTCATGGTCATTCACCACGTGGGCTTCAAGTTCCTCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LTHCWALDWVWILAS*SWSFTTWASSSSWL
Trigger: AAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GTTTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTaGGATTGGGTGTGGATATTGGCATCATTGTCATGGTCATTCACC +
Preference number: 6 (lower is better)
Translates to: VFRHKELEGLTHCWA*DWVWILASLSWSFT
Trigger: GGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp TTCTGTGGTTTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTaGGGCTTTGGATTGGGTGTGGATATTGGCATCATTGTCATGGTC +
Preference number: 6 (lower is better)
Translates to: FCGFPTQRAGGAYAL*GFGLGVDIGIIVMV
Trigger: GACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAACCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GTTCAGCATTCGGGATGTATTCCACCACATTGTTTCCGGACAAACTaGTATCGCTGTTGGGTTGGCACTGGGCGTTGTCCTGCAACTCTT +
Preference number: 6 (lower is better)
Translates to: VQHSGCIPPHCFRTN*YRCWVGTGRCPATL
Trigger: AAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATACATCCCGAATGCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp AAGGCTGTCTCTGTCGATGGACTCGTAAGTGCTGCTTaGTGTAGCCCTTGTTGCCACTTGTGTAGTGACACA +
Preference number: 6 (lower is better)
Translates to: KAVSVDGLVSAA*CSPCCHLCSDT
Trigger: TGTGTCACTACACAAGTGGCAACAAGGGCTACATCAAGCAGCACTTACGAGTCCATCGACAGAGACAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp GCTTTGGATTGGGTGTGGATATTGGCATCATTGTCATaGTCATTCACCACGTGGGCTTCAAGTTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ALDWVWILASLS*SFTTWASSSSW
Trigger: CCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp ACAAAGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTaGATTGGGTGTGGATATTGGCATCATTGTCATGGT +
Preference number: 6 (lower is better)
Translates to: TKSWRGLRTVGL*IGCGYWHHCHG
Trigger: ACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TCGAAGAGACTCAGAATTTGTCCTTCTCCGGCCTGGTaGGGCATTCTCATCAGTAGCCAGGCCTTTATTCAT +
Preference number: 6 (lower is better)
Translates to: SKRLRICPSPAW*GILISSQAFIH
Trigger: ATGAATAAAGGCCTGGCTACTGATGAGAATGCCCCACCAGGCCGGAGAAGGACAAATTCTGAGTCTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp AGAGCTGGAGGGGCTTACGCACTGTTGGGCTTTGGATaGGGTGTGGATATTGGCATCATTGTCATGGTCATT +
Preference number: 6 (lower is better)
Translates to: RAGGAYALLGFG*GVDIGIIVMVI
Trigger: AATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp TTTCCGACACAAAGAGCTGGAGGGGCTTACGCACTGTaGGGCTTTGGATTGGGTGTGGATATTGGCATCATT +
Preference number: 6 (lower is better)
Translates to: FPTQRAGGAYAL*GFGLGVDIGII
Trigger: AATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp CTGCAGCTAATGAGTGTAATCGAAGAGACTCAGAATTaGTCCTTCTCCGGCCTGGTGGGGCATTCTCATCAG +
Preference number: 6 (lower is better)
Translates to: LQLMSVIEETQN*SFSGLVGHSHQ
Trigger: CTGATGAGAATGCCCCACCAGGCCGGAGAAGGACAAATTCTGAGTCTCTTCGATTACACTCATTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 72 bp CTTGTATCGCTGTTGGGTTGGCACTGGGCGTTGTCCTaGAACTCTTTCAAAATGTCATCGTCTGAAGCGTTT +
Preference number: 6 (lower is better)
Translates to: LVSLLGWHWALS*NSFKMSSSEAF
Trigger: AAACGCTTCAGACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TCATGGTCATTCACCACGTGGGCTTCAAGTTCCTCCTaGCTTCTAGATGTAATATGGCACTCTGAGCACATC +
Preference number: 6 (lower is better)
Translates to: SWSFTTWASSSS*LLDVIWHSEHI
Trigger: GATGTGCTCAGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TTACGCACTGTTGGGCTTTGGATTGGGTGTGGATATTaGCATCATTGTCATGGTCATTCACCACGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: LRTVGLWIGCGY*HHCHGHSPRGL
Trigger: AAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCACACCCAATCCAAAGCCCAACAGTGCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TTTCATTTCTTTCTGTGGTTTTCCGACACAAAGAGCTaGAGGGGCTTACGCACTGTTGGGCTTTGGATTGGG +
Preference number: 6 (lower is better)
Translates to: FHFFLWFSDTKS*RGLRTVGLWIG
Trigger: CCCAATCCAAAGCCCAACAGTGCGTAAGCCCCTCCAGCTCTTTGTGTCGGAAAACCACAGAAAGAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp GAGCTGCAAATCTGCACTTGCACTGATGGCCCATTGTaGATACTCAGTTCACTCTCTCCAATAGCAATGACG +
Preference number: 6 (lower is better)
Translates to: ELQICTCTDGPL*ILSSLSPIAMT
Trigger: CGTCATTGCTATTGGAGAGAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TTTCCGGACAAACTTGTATCGCTGTTGGGTTGGCACTaGGCGTTGTCCTGCAACTCTTTCAAAATGTCATCG +
Preference number: 6 (lower is better)
Translates to: FPDKLVSLLGWH*ALSCNSFKMSS
Trigger: CGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp GAGGTATTACTTGTAGGGCTCAGTTTCTCATTCTCGTaGGTACCCAGAACTTCACTGGGAGTCTGGGACATC +
Preference number: 6 (lower is better)
Translates to: EVLLVGLSFSFS*VPRTSLGVWDI
Trigger: GATGTCCCAGACTCCCAGTGAAGTTCTGGGTACCAACGAGAATGAGAAACTGAGCCCTACAAGTAATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS CAA 90 bp TTGTTTCCGGACAAACTTGTATCGCTGTTGGGTTGGCACTGGGCGTaGTCCTGCAACTCTTTCAAAATGTCATCGTCTGAAGCGTTTTGG +
Preference number: 6 (lower is better)
Translates to: LFPDKLVSLLGWHWA*SCNSFKMSSSEAFW
Trigger: CCAAAACGCTTCAGACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GTATTCCACCACATTGTTTCCGGACAAACTTGTATCGCTGTTGGGTaGGCACTGGGCGTTGTCCTGCAACTCTTTCAAAATGTCATCGTC +
Preference number: 6 (lower is better)
Translates to: VFHHIVSGQTCIAVG*ALGVVLQLFQNVIV
Trigger: GACGATGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GGGATGTATTCCACCACATTGTTTCCGGACAAACTTGTATCGCTGTaGGGTTGGCACTGGGCGTTGTCCTGCAACTCTTTCAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: GMYSTTLFPDKLVSL*GWHWALSCNSFKMS
Trigger: TGACATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAATACATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GATAACTGTTCTGAGCTGCAAATCTGCACTTGCACTGATGGCCCATaGTGGATACTCAGTTCACTCTCTCCAATAGCAATGACGACTGCA +
Preference number: 6 (lower is better)
Translates to: DNCSELQICTCTDGP*WILSSLSPIAMTTA
Trigger: TGCAGTCGTCATTGCTATTGGAGAGAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp AGCATTTCTTCCTCATTGGGGTCCAGGGTAACTGACTaGCTTAGGTGTACTCCTCTTTCTGCACTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SISSSLGSRVTD*LRCTPLSALCS
Trigger: AGAACAGAGTGCAGAAAGAGGAGTACACCTAAGTCAGTCAGTTACCCTGGACCCCAATGAGGAAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 72 bp CCTGTTCCCCAATATCTGGCACCAACATGGCAACACTaGTACTTTCTTCCATATCCAAGGTTACATGGCTGT +
Preference number: 6 (lower is better)
Translates to: PVPQYLAPTWQH*YFLPYPRLHGC
Trigger: ACAGCCATGTAACCTTGGATATGGAAGAAAGTAGCAGTGTTGCCATGTTGGTGCCAGATATTGGGGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp GACATCTCAGCCCTTCTAGTATCAGCAGCAGGTGACTaGATTACTTTAGCCGGAATCTCACAAAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: DISALLVSAAGD*ITLAGISQSSW
Trigger: CCAAGAACTTTGTGAGATTCCGGCTAAAGTAATCCAGTCACCTGCTGCTGATACTAGAAGGGCTGAGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TCAGTTTCTCATTCTCGTTGGTACCCAGAACTTCACTaGGAGTCTGGGACATCAGTTCTGAAGATGACACTG +
Preference number: 6 (lower is better)
Translates to: SVSHSRWYPELH*ESGTSVLKMTL
Trigger: CAGTGTCATCTTCAGAACTGATGTCCCAGACTCCCAGTGAAGTTCTGGGTACCAACGAGAATGAGAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS CAA 72 bp CACATTGTTTCCGGACAAACTTGTATCGCTGTTGGGTaGGCACTGGGCGTTGTCCTGCAACTCTTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: HIVSGQTCIAVG*ALGVVLQLFQN
Trigger: ATTTTGAAAGAGTTGCAGGACAACGCCCAGTGCCAACCCAACAGCGATACAAGTTTGTCCGGAAACAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp ATTAGGTTTCATGGAGTAACACCATACGAAAGGGCTTaGCTTGCGGCTCTATTTGAGCTCCTGCGGTATCTG +
Preference number: 6 (lower is better)
Translates to: IRFHGVTPYERA*LAALFELLRYL
Trigger: CAGATACCGCAGGAGCTCAAATAGAGCCGCAAGCAAAGCCCTTTCGTATGGTGTTACTCCATGAAACCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS GCA 72 bp GAAGATGATAACTGTTCTGAGCTGCAAATCTGCACTTaGACTGATGGCCCATTGTGGATACTCAGTTCACTC +
Preference number: 6 (lower is better)
Translates to: EDDNCSELQICT*TDGPLWILSSL
Trigger: GAGTGAACTGAGTATCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TTCAGCAGTCAGTATAGCTTCCTGTTCCCCAATATCTaGCACCAACATGGCAACACTGCTACTTTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: FSSQYSFLFPNI*HQHGNTATFFH
Trigger: ATGGAAGAAAGTAGCAGTGTTGCCATGTTGGTGCCAGATATTGGGGAACAGGAAGCTATACTGACTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp CCACACAGAGAGCATCTGTACGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTGACACCAACATATGTT +
Preference number: 6 (lower is better)
Translates to: PHREHLYGLSEL*IRLWFLTPTYV
Trigger: AACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGTACAGATGCTCTCTGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311921.8
ENST00000355898.6
CDS TCA 72 bp CTACCCATTTCTGCCACAGATGCAGTTTGGACAGTATaGGTCTGTAGATTGTCCACACTTACTGGGATATCT +
Preference number: 6 (lower is better)
Translates to: LPISATDAVWTV*VCRLSTLTGIS
Trigger: AGATATCCCAGTAAGTGTGGACAATCTACAGACTCATACTGTCCAAACTGCATCTGTGGCAGAAATGGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp CACTGGTATATTCTTGTCTTACAGTGGTGGATCATGTaGCTCTCCAAATCTTTGCTGTTGTCCGCTATGTGC +
Preference number: 6 (lower is better)
Translates to: HWYILVLQWWIM*LSKSLLLSAMC
Trigger: GCACATAGCGGACAACAGCAAAGATTTGGAGAGTCACATGATCCACCACTGTAAGACAAGAATATACCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 72 bp ACAAAACAAGCATCGATACATGCCGTACTGTTCGTATaGATACCATTTCCTCCTACCCATTTCTGCCACAGA +
Preference number: 6 (lower is better)
Translates to: TKQASIHAVLFV*IPFPPTHFCHR
Trigger: TCTGTGGCAGAAATGGGTAGGAGGAAATGGTATGCATACGAACAGTACGGCATGTATCGATGCTTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 72 bp GTTCTAAAGGAGATGAAGATGATAACTGTTCTGAGCTaGAAATCTGCACTTGCACTGATGGCCCATTGTGGA +
Preference number: 6 (lower is better)
Translates to: VLKEMKMITVLS*KSALALMAHCG
Trigger: TCCACAATGGGCCATCAGTGCAAGTGCAGATTTGCAGCTCAGAACAGTTATCATCTTCATCTCCTTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp GACTGGATTACTTTAGCCGGAATCTCACAAAGTTCTTaGGTTTCAAGAGAGTGTGTTGCAGCACTTGAACGT +
Preference number: 6 (lower is better)
Translates to: DWITLAGISQSS*VSRECVAALER
Trigger: ACGTTCAAGTGCTGCAACACACTCTCTTGAAACCCAAGAACTTTGTGAGATTCCGGCTAAAGTAATCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TGGGCTTCAAGTTCCTCCTGGCTTCTAGATGTAATATaGCACTCTGAGCACATCAGTATCACTTCATTTTGC +
Preference number: 6 (lower is better)
Translates to: WASSSSWLLDVI*HSEHISITSFC
Trigger: GCAAAATGAAGTGATACTGATGTGCTCAGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CCA 72 bp TGGATATTGGCATCATTGTCATGGTCATTCACCACGTaGGCTTCAAGTTCCTCCTGGCTTCTAGATGTAATA +
Preference number: 6 (lower is better)
Translates to: WILASLSWSFTT*ASSSSWLLDVI
Trigger: TATTACATCTAGAAGCCAGGAGGAACTTGAAGCCCACGTGGTGAATGACCATGACAATGATGCCAATATCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp GAATCTCACAAAGTTCTTGGGTTTCAAGAGAGTGTGTaGCAGCACTTGAACGTGGGCGTTTCTTCCCAATTA +
Preference number: 6 (lower is better)
Translates to: ESHKVLGFQESV*QHLNVGVSSQL
Trigger: TAATTGGGAAGAAACGCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAACCCAAGAACTTTGTGAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp AAACTATATGAGGTATTACTTGTAGGGCTCAGTTTCTCATTCTCGTaGGTACCCAGAACTTCACTGGGAGTCTGGGACATCAGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: KLYEVLLVGLSFSFS*VPRTSLGVWDISSE
Trigger: TTCAGAACTGATGTCCCAGACTCCCAGTGAAGTTCTGGGTACCAACGAGAATGAGAAACTGAGCCCTACAAGTAATACCTCATATAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS TCA 72 bp AAGTTCCTCCTGGCTTCTAGATGTAATATGGCACTCTaGGCACATCAGTATCACTTCATTTTGCTGACCATG +
Preference number: 6 (lower is better)
Translates to: KFLLASRCNMAL*AHQYHFILLTM
Trigger: CATGGTCAGCAAAATGAAGTGATACTGATGTGCTCAGAGTGCCATATTACATCTAGAAGCCAGGAGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp GTTCTGAAGATGACACTGCATTTTCTGAACTTCCAGTaGCGGGATCTGCACTCTCTTCACTGCTCTTTAATT +
Preference number: 6 (lower is better)
Translates to: VLKMTLHFLNFQ*RDLHSLHCSLI
Trigger: AATTAAAGAGCAGTGAAGAGAGTGCAGATCCCGTCACTGGAAGTTCAGAAAATGCAGTGTCATCTTCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS TCA 72 bp TCCCTGAGGATAAGGATCTGCTTGTTTTGTTTAGACTaGATCCCCAGCGCTTGGCAAATTATAGGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: SLRIRICLFCLD*IPSAWQIIGFQ
Trigger: TTGGAAACCTATAATTTGCCAAGCGCTGGGGATTCAGTCTAAACAAAACAAGCAGATCCTTATCCTCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS TCA 72 bp AGCCATGTTACTAAACTCACTCTGCAACAACAGGGCTaGGTAATTCAAGTTGGGGTAAGCTTATGTCAACAC +
Preference number: 6 (lower is better)
Translates to: SHVTKLTLQQQG*VIQVGVSLCQH
Trigger: GTGTTGACATAAGCTTACCCCAACTTGAATTACTCAGCCCTGTTGTTGCAGAGTGAGTTTAGTAACATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS GCA 72 bp GGCCACAAGTATAACTACAAAACAAGCATCGATACATaGCGTACTGTTCGTATGCATACCATTTCCTCCTAC +
Preference number: 6 (lower is better)
Translates to: GHKYNYKTSIDT*RTVRMHTISSY
Trigger: GTAGGAGGAAATGGTATGCATACGAACAGTACGGCATGTATCGATGCTTGTTTTGTAGTTATACTTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS GCA 72 bp AGGGCACTTTTATGTCATGTGCAAGTCACTGCAGCCTaGATAACAAAATACATAGATACCTTCCTGGACACA +
Preference number: 6 (lower is better)
Translates to: RALLCHVQVTAA*ITKYIDTFLDT
Trigger: TGTGTCCAGGAAGGTATCTATGTATTTTGTTATGCAGGCTGCAGTGACTTGCACATGACATAAAAGTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS CCA 72 bp CATCTGAACTCTTTCCTGTACGGCTTATCAGAGTTATaGATTCGCCTGTGGTTTCTGACACCAACATATGTT +
Preference number: 6 (lower is better)
Translates to: HLNSFLYGLSEL*IRLWFLTPTYV
Trigger: AACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGTACAGGAAAGAGTTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544431.5
CDS CAA 72 bp GGAAGGATTCTTCACACTGCTTGCACTGGTATATTCTaGTCTTACAGTGGTGGATCATGTGACTCTCCAAAT +
Preference number: 6 (lower is better)
Translates to: GRILHTACTGIF*SYSGGSCDSPN
Trigger: ATTTGGAGAGTCACATGATCCACCACTGTAAGACAAGAATATACCAGTGCAAGCAGTGTGAAGAATCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp AGCTGTCTATTCCCTGAGGATAAGGATCTGCTTGTTTaGTTTAGACTGAATCCCCAGCGCTTGGCAAATTAT +
Preference number: 6 (lower is better)
Translates to: SCLFPEDKDLLV*FRLNPQRLANY
Trigger: ATAATTTGCCAAGCGCTGGGGATTCAGTCTAAACAAAACAAGCAGATCCTTATCCTCAGGGAATAGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS CAA 72 bp AAAGTTCTTGGGTTTCAAGAGAGTGTGTTGCAGCACTaGAACGTGGGCGTTTCTTCCCAATTAAAAGACATT +
Preference number: 6 (lower is better)
Translates to: KVLGFQESVLQH*NVGVSSQLKDI
Trigger: AATGTCTTTTAATTGGGAAGAAACGCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAACCCAAGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GAATCTCACAAAGTTCTTGGGTTTCAAGAGAGTGTGTTGCAGCACTaGAACGTGGGCGTTTCTTCCCAATTAAAAGACATTTTTGTGACT +
Preference number: 6 (lower is better)
Translates to: ESHKVLGFQESVLQH*NVGVSSQLKDIFVT
Trigger: AGTCACAAAAATGTCTTTTAATTGGGAAGAAACGCCCACGTTCAAGTGCTGCAACACACTCTCTTGAAACCCAAGAACTTTGTGAGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp TCTTATAATGGAAGGATTCTTCACACTGCTTGCACTGGTATATTCTaGTCTTACAGTGGTGGATCATGTGACTCTCCAAATCTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SYNGRILHTACTGIF*SYSGGSCDSPNLCC
Trigger: ACAGCAAAGATTTGGAGAGTCACATGATCCACCACTGTAAGACAAGAATATACCAGTGCAAGCAGTGTGAAGAATCCTTCCATTATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp ACGGCTTATCAGAGTTATGGATTCGCCTGTGGTTTCTaGCACCAACATATGTTGTACTTGTATAATCACACA +
Preference number: 6 (lower is better)
Translates to: TAYQSYGFACGF*HQHMLYLYNHT
Trigger: TGTGTGATTATACAAGTACAACATATGTTGGTGTCAGAAACCACAGGCGAATCCATAACTCTGATAAGCCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
CDS CCA 72 bp ACTTTCTTCCATATCCAAGGTTACATGGCTGTTAAGTaGCAGAGCCAGTGTCTTTCAAATCAATTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: TFFHIQGYMAVK*QSQCLSNQFLK
Trigger: TTTCAGGAATTGATTTGAAAGACACTGGCTCTGCCACTTAACAGCCATGTAACCTTGGATATGGAAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 72 bp TACTGCTTTCCTGCTCGAGTCATTATTCCACCTAATTaGTGTTTAGAGCTGTATTGTGGTCCTTATTCAGGA +
Preference number: 6 (lower is better)
Translates to: YCFPARVIIPPN*CLELYCGPYSG
Trigger: TCCTGAATAAGGACCACAATACAGCTCTAAACACAAATTAGGTGGAATAATGACTCGAGCAGGAAAGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000586664.1
CDS CAA 72 bp AAACGATTTCTTGAAGATATTCAACGCTTCATGTACTaGTCTGTCAGCATACAGTCCACAGGCTATTCACAC +
Preference number: 6 (lower is better)
Translates to: KRFLEDIQRFMY*SVSIQSTGYSH
Trigger: GTGTGAATAGCCTGTGGACTGTATGCTGACAGACAAGTACATGAAGCGTTGAATATCTTCAAGAAATCGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS GCA 72 bp ATTGACTCTTATAATGGAAGGATTCTTCACACTGCTTaGACTGGTATATTCTTGTCTTACAGTGGTGGATCA +
Preference number: 6 (lower is better)
Translates to: IDSYNGRILHTA*TGIFLSYSGGS
Trigger: TGATCCACCACTGTAAGACAAGAATATACCAGTGCAAGCAGTGTGAAGAATCCTTCCATTATAAGAGTCAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS CAA 90 bp GATCATATAAAACGATTTCTTGAAGATATTCAACGCTTCATGTACTaGTCTGTCAGCATACAGTCCACAGGCTATTCACACTCTGCTTTA +
Preference number: 6 (lower is better)
Translates to: DHIKRFLEDIQRFMY*SVSIQSTGYSHSAL
Trigger: TAAAGCAGAGTGTGAATAGCCTGTGGACTGTATGCTGACAGACAAGTACATGAAGCGTTGAATATCTTCAAGAAATCGTTTTATATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS TCA 72 bp TTTGAGTACGCTGCCAATGTACTATCTACTTGCCTTTaGCTAGTATCTGGATCTAAAAGGTTTATATCTCCA +
Preference number: 6 (lower is better)
Translates to: FEYAANVLSTCL*LVSGSKRFISP
Trigger: TGGAGATATAAACCTTTTAGATCCAGATACTAGTCAAAGGCAAGTAGATAGTACATTGGCAGCGTACTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311921.8
ENST00000355898.6
ENST00000544431.5
ENST00000587084.5
CDS TCA 72 bp TTTGTTTCAGAGAGTTTTACAGGGATGACATCTGTTTaGCATGAGAATTTTGGTGCTACAGTGGTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: FVSESFTGMTSV*HENFGATVVSK
Trigger: TTTTGACACCACTGTAGCACCAAAATTCTCATGTCAAACAGATGTCATCCCTGTAAAACTCTCTGAAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5
CDS TCA 72 bp TCAAGTTGGGGTAAGCTTATGTCAACACGAGTTGAGTaGCTTGATCATATAAAACGATTTCTTGAAGATATT +
Preference number: 6 (lower is better)
Translates to: SSWGKLMSTRVE*LDHIKRFLEDI
Trigger: AATATCTTCAAGAAATCGTTTTATATGATCAAGTCACTCAACTCGTGTTGACATAAGCTTACCCCAACTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587084.5