RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF502 (Homo sapiens)

Ensembl gene IDs: ENSG00000196653

Ensembl transcript IDs: ENST00000296091.8, ENST00000411443.1, ENST00000436624.7, ENST00000449836.5, ENST00000626630.2, ENST00000628995.3, ENST00000629892.1, ENST00000630464.2

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGAGCCTCCCCCATGGTAGCATGGTCAGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTACATCAGAGCTGTGCCACTTCACAC +
Preference number: 1 (lower is better)
Translates to: LGASPMVAWSGLPQI*RLDLALHQSCATSH
Trigger: GTGTGAAGTGGCACAGCTCTGATGTAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCCTGACCATGCTACCATGGGGGAGGCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR CCA 90 bp TCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATCTGGAGGCTAGACTTAGCACTACAT +
Preference number: 1 (lower is better)
Translates to: SQDHFHRLGASPMVA*SGLPQIWRLDLALH
Trigger: ATGTAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCCTGACCATGCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR TCA 90 bp TGGAGGCTAGACTTAGCACTACATCAGAGCTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACG +
Preference number: 1 (lower is better)
Translates to: WRLDLALHQSCATSH*QAVFKKNISTCQPT
Trigger: CGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGTGCTAAGTCTAGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR GCA 90 bp CTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCTGCATTCCCTAAGCTCCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: LYLKSRNFFLPCIPR*PPQVGSAFPKLPPP
Trigger: TGGAGGTGGGAGCTTAGGGAATGCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR TCA 90 bp CGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAATGCCTCCTCAAGCTGTAAGAGTCAC +
Preference number: 1 (lower is better)
Translates to: RKWVTSQNVGQDVVK*TEVLTNASSSCKSH
Trigger: GTGACTCTTACAGCTTGAGGAGGCATTTGTTAGCACTTCTGTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCCCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGCCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGCTGTAAGAGTCACATaGGGAGACAGTGGCAATGTG +
Preference number: 2 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSAVRVT*GDSGNV
Trigger: CACATTGCCACTGTCTCCCCATGTGACTCTTACAGC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR CAA 90 bp CTCTTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTAGCATGGTCAGGGCTGCCTCAAATC +
Preference number: 2 (lower is better)
Translates to: LLLVSVSFSQDHFHR*GASPMVAWSGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 2 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSCATSH*QAVFKK
Trigger: TTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACA...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWCATSH*QAVFKK
Trigger: TTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: PPFLETFLSEYSSQGSFISRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGAAAAACATCTCAACCTaGCAGCCAACGAAAATGGGT +
Preference number: 2 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWKNIST*QPTKMG
Trigger: ACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTT...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTA +
Preference number: 2 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASGLPQI*RLDLAL
Trigger: TAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGCTGTAAGAGTCACATaGGGAGACAGTGGCAATGTG +
Preference number: 2 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGAVRVT*GDSGNV
Trigger: CACATTGCCACTGTCTCCCCATGTGACTCTTACAGC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACACCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR GCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAACTACATCAGAGCTGTaGCACTTCACACTGACAGGC +
Preference number: 2 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLTTSEL*HFTLTG
Trigger: GCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGT...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAGCTGTAAGAGTCACATaGGGAGACAGTGGCAATGTG +
Preference number: 2 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTAVRVT*GDSGNV
Trigger: CACATTGCCACTGTCTCCCCATGTGACTCTTACAGC...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR CCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACACACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 2 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACACAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAAT +
Preference number: 2 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTQDVVK*TEVLTN
Trigger: ATTTGTTAGCACTTCTGTTCACTTTACTACATCCTG...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR CCA 72 bp CACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATCTGGAGGCTAGACTTA +
Preference number: 3 (lower is better)
Translates to: HFHRLGASPMVA*SGLPQIWRLDL
Trigger: TAAGTCTAGCCTCCAGATTTGAGGCAGCCCTGACCATGCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR CCA 72 bp TCCCCCATGGTAGCATGGTCAGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTACATCAGAGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: SPMVAWSGLPQI*RLDLALHQSCA
Trigger: GGCACAGCTCTGATGTAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR GCA 72 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCTGCATTCCCTAAGCTC +
Preference number: 3 (lower is better)
Translates to: KSRNFFLPCIPR*PPQVGSAFPKL
Trigger: GAGCTTAGGGAATGCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR TCA 72 bp GTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAATGCCTCCTCAAGCTGT +
Preference number: 3 (lower is better)
Translates to: VTSQNVGQDVVK*TEVLTNASSSC
Trigger: ACAGCTTGAGGAGGCATTTGTTAGCACTTCTGTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
3UTR CCA 72 bp TCAAAGGCTATCCTCAATCTTCTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATGAAAGGAATTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SKAILNLLKLNF*VAVKNMKGIWE
Trigger: TTCCCAAATTCCTTTCATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAGAAGATTGAGGATAGCCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCAAAACTGGGAACCTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSKTGNL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGGTTCCCAGTTTT...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436624.7
ENST00000628995.3
3UTR CAA 72 bp GTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTAGCATGGTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSVSFSQDHFHR*GASPMVAWSGL
Trigger: CAGCCCTGACCATGCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGTCTTCCTGGTTCTCTaGACAGGTATGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSVFLVL*TGMTAS
Trigger: GGAGGCAGTCATACCTGTTCAGAGAACCAGGAAGAC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCTCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTACTACATCAGAGCTGTaGCACTTCACACTGACAGGC +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPTTSEL*HFTLTG
Trigger: GCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETSPMVA*SGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTTCCTGGAAAAGGCATaGTTCAGCAATCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWFLEKA*FSNLPR
Trigger: CCTAGGGAGATTGCTGAATCATGCCTTTTCCAGGAA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGTGTTCAGTGAGATGTaGGTGATTGCGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSVFSEM*VIAEGI
Trigger: AATTCCTTCCGCAATCACTCACATCTCACTGAACAC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSILQTS*SRAGLF
Trigger: GAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAAT...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCCTGAACAGGTATGACTaGCTCCCCATAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSLNRYD*LPINQY
Trigger: ATACTGGTTTATGGGGAGGCAGTCATACCTGTTCAG...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPTCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSPMVA*SGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSIVSSL*LENTSG
Trigger: ACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGAT...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCACGTGTAACAAGGCTTaGGGTCAAAAGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSTCNKA*GQKQAF
Trigger: AAAAGCTTGCTTTTGACCTCAAGCCTTGTTACACGT...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTGTGTTCAGTGAGATGTaGGTGATTGCGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPVFSEM*VIAEGI
Trigger: AATTCCTTCCGCAATCACTCACATCTCACTGAACAC...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPCATSH*QAVFKK
Trigger: TTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGTCTTCCTGGTTCTCTaGACAGGTATGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASVFLVL*TGMTAS
Trigger: GGAGGCAGTCATACCTGTTCAGAGAACCAGGAAGAC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCGTCTTCCTGGTTCTCTaGACAGGTATGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCVFLVL*TGMTAS
Trigger: GGAGGCAGTCATACCTGTTCAGAGAACCAGGAAGAC...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACACTGGGAACCTCACTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTLGTSL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGTGAGGTTCCCAG...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449836.5
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGAAAACTGGGAACCTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGKTGNL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGGTTCCCAGTTTT...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436624.7
ENST00000628995.3
CDS-3UTR GCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWILQTS*SRAGLF
Trigger: GAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAAT...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCCCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCTGAACAGGTATGACTaGCTCCCCATAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPLNRYD*LPINQY
Trigger: ATACTGGTTTATGGGGAGGCAGTCATACCTGTTCAG...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGCTGTAAGAGTCACATaGGGAGACAGTGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETAVRVT*GDSGNV
Trigger: CACATTGCCACTGTCTCCCCATGTGACTCTTACAGC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPLLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGTGAGTGGGGTGCTCTaGGTAAACGCTTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGVSGVL*VNALPH
Trigger: ATGTGGCAAAGCGTTTACTCAGAGCACCCCACTCAC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGTGAGGCAGGTGTTCTaGTTAAAGCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETVRQVF*LKPFPH
Trigger: ATGTGGAAAGGGCTTTAATCAGAACACCTGCCTCAC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGTCTTCCTGGTTCTCTaGACAGGTATGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGVFLVL*TGMTAS
Trigger: GGAGGCAGTCATACCTGTTCAGAGAACCAGGAAGAC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTAAAAACATCTCAACCTaGCAGCCAACGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPKNIST*QPTKMG
Trigger: ACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCGTCAGTAGCAAAATGTaGTATCCTGATTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSVSSKM*YPDFQG
Trigger: TCCCTGAAAATCAGGATAGCACATTTTGCTACTGAC...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTCTCTTCGCTTTGATTaGAAAACACTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWSLRFD*KTLQVW
Trigger: CCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNSPMVA*SGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSPMVA*SGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTAGTCACCTCAAAGCTTaGAAGAATCAGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPSHLKA*KNQERP
Trigger: AGGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTGTGTCTCTCTCCTCTaGTCTCTGTACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCCVSLL*SLYTNS
Trigger: GCTGTTGGTGTACAGAGACCAGAGGAGAGAGACACA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCCTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATG +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSLKLNF*VAVKNM
Trigger: CATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAG...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCAAACATTTTTCACTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCKHFSL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGTGAAAAATGTTT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTTCCTGGAAAAGGCATaGTTCAGCAATCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASFLEKA*FSNLPR
Trigger: CCTAGGGAGATTGCTGAATCATGCCTTTTCCAGGAA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGTGAGTGGGGTGCTCTaGGTAAACGCTTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLVSGVL*VNALPH
Trigger: ATGTGGCAAAGCGTTTACTCAGAGCACCCCACTCAC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCGTGAGTGGGGTGCTCTaGGTAAACGCTTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGVSGVL*VNALPH
Trigger: ATGTGGCAAAGCGTTTACTCAGAGCACCCCACTCAC...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGCCAACGAAAATGGGTaGCAAGTCAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLANENG*QVRMWG
Trigger: GCCCCACATTCTGACTTGTCACCCATTTTCGTTGGC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCTGGGAACCTCACTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPLGTSL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGTGAGGTTCCCAG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449836.5
ENST00000630464.2
CDS-3UTR GCA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCAATAATTTCAGGGGGTaGTTCTTTGTGGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSNNFRG*FFVDES
Trigger: ACTTTCATCCACAAAGAAGCACCCCCTGAAATTATT...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCCCCTGTATTCCCAGATaGCCACCTCAAGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFPCIPR*PPQVGS
Trigger: AGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGG...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCTCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCTGATGTTTAGTGAGTaGGGTGCTCTGAGTAAACGC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASLMFSE*GALSKR
Trigger: GCGTTTACTCAGAGCACCCCACTCACTAAACATCAG...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTA +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIGLPQI*RLDLAL
Trigger: TAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTA +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGGLPQI*RLDLAL
Trigger: TAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTCAGGTCTGGAAAACTaGGAACCTGTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGSGLEN*EPVRST
Trigger: CGTGGATCTCACAGGTTCCCAGTTTTCCAGACCTGA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436624.7
ENST00000628995.3
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTTCCTGGAAAAGGCATaGTTCAGCAATCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGFLEKA*FSNLPR
Trigger: CCTAGGGAGATTGCTGAATCATGCCTTTTCCAGGAA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETLLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCGTGTTCAGTGAGATGTaGGTGATTGCGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCVFSEM*VIAEGI
Trigger: AATTCCTTCCGCAATCACTCACATCTCACTGAACAC...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCGTGAGTGGGGTGCTCTaGGTAAACGCTTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFVSGVL*VNALPH
Trigger: ATGTGGCAAAGCGTTTACTCAGAGCACCCCACTCAC...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGTGAGGCAGGTGTTCTaGTTAAAGCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIVRQVF*LKPFPH
Trigger: ATGTGGAAAGGGCTTTAATCAGAACACCTGCCTCAC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWQDVVK*TEVLTN
Trigger: ATTTGTTAGCACTTCTGTTCACTTTACTACATCCTG...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAGTCTTCCTGGTTCTCTaGACAGGTATGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTVFLVL*TGMTAS
Trigger: GGAGGCAGTCATACCTGTTCAGAGAACCAGGAAGAC...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCACTACATCAGAGCTGTaGCACTTCACACTGACAGGC +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFTTSEL*HFTLTG
Trigger: GCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGT...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCTGAACAGGTATGACTaGCTCCCCATAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASLNRYD*LPINQY
Trigger: ATACTGGTTTATGGGGAGGCAGTCATACCTGTTCAG...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFITCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGTCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTCTTGTTTACCCAGCCTaGACAAGTCTCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETLVYPA*TSLSSN
Trigger: ATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAG...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTGATGTTTAGTGAGTaGGGTGCTCTGAGTAAACGC +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFILMFSE*GALSKR
Trigger: GCGTTTACTCAGAGCACCCCACTCACTAAACATCAG...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCGCTGTAAGAGTCACATaGGGAGACAGTGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGAVRVT*GDSGNV
Trigger: CACATTGCCACTGTCTCCCCATGTGACTCTTACAGC...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTGTGTCTCTCTCCTCTaGTCTCTGTACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFCVSLL*SLYTNS
Trigger: GCTGTTGGTGTACAGAGACCAGAGGAGAGAGACACA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCAAACATTTTTCACTGTaGGATCCACGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGKHFSL*DPRTLR
Trigger: GCGGAGAGTCCGTGGATCTCACAGTGAAAAATGTTT...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGTGCTTCTTTGTGGATaGAAGTTATTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETVLLCG*KLFSQN
Trigger: GTTTTGGGAGAATAACTTTCATCCACAAAGAAGCAC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGTGTTCAGTGAGATGTaGGTGATTGCGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIVFSEM*VIAEGI
Trigger: AATTCCTTCCGCAATCACTCACATCTCACTGAACAC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACGTGAGGCAGGTGTTCTaGTTAAAGCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNVRQVF*LKPFPH
Trigger: ATGTGGAAAGGGCTTTAATCAGAACACCTGCCTCAC...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGTGAGGCAGGTGTTCTaGTTAAAGCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLVRQVF*LKPFPH
Trigger: ATGTGGAAAGGGCTTTAATCAGAACACCTGCCTCAC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCGCAGGGTTATGTAGGTaGCTTGCTCAGTCACATGCA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFAGLCR*LAQSHA
Trigger: TGCATGTGACTGAGCAAGTCACCTACATAACCCTGC...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIILQTS*SRAGLF
Trigger: GAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAAT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTCCAGGAACTCTACCTaGCCCTCTACTCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPSRNST*PSTPSQ
Trigger: CTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCAAAAACATCTCAACCTaGCAGCCAACGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCKNIST*QPTKMG
Trigger: ACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCACTACATCAGAGCTGTaGCACTTCACACTGACAGGC +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFTTSEL*HFTLTG
Trigger: GCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGT...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAACTACATCAGAGCTGTaGCACTTCACACTGACAGGC +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTTTSEL*HFTLTG
Trigger: GCCTGTCAGTGTGAAGTGGCACAGCTCTGATGTAGT...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGTCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCTCTTCGCTTTGATTaGAAAACACTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSLRFD*KTLQVW
Trigger: CCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACTGATGTTTAGTGAGTaGGGTGCTCTGAGTAAACGC +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLLMFSE*GALSKR
Trigger: GCGTTTACTCAGAGCACCCCACTCACTAAACATCAG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCCTGATGTTTAGTGAGTaGGGTGCTCTGAGTAAACGC +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGLMFSE*GALSKR
Trigger: GCGTTTACTCAGAGCACCCCACTCACTAAACATCAG...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACCACATGGGGAGACAGTaGCAATGTGTAGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNHMGRQ*QCVGFI
Trigger: GATAAAGCCTACACATTGCCACTGTCTCCCCATGTG...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFGLPQI*RLDLAL
Trigger: TAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCC...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTCCCCCATGGTAGCATaGTCAGGGCTGCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPSPMVA*SGLPQI
Trigger: GATTTGAGGCAGCCCTGACCATGCTACCATGGGGGA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCAGTCACCTCAAAGCTTaGAAGAATCAGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSHLKA*KNQERP
Trigger: AGGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATGTGTCTCTCTCCTCTaGTCTCTGTACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTCVSLL*SLYTNS
Trigger: GCTGTTGGTGTACAGAGACCAGAGGAGAGAGACACA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTCTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATG +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETLKLNF*VAVKNM
Trigger: CATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAG...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTCAGGTCTGGAAAACTaGGAACCTCACTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFSGLEN*EPHCEI
Trigger: GATCTCACAGTGAGGTTCCCAGTTTTCCAGACCTGA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449836.5
ENST00000630464.2
CDS-3UTR TCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCACGTGTAACAAGGCTTaGGGTCAAAAGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFITCNKA*GQKQAF
Trigger: AAAAGCTTGCTTTTGACCTCAAGCCTTGTTACACGT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCTTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFILLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTCAGTGAGATGTGAGTaGTTGCGGAAGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFSVRCE*LRKEFP
Trigger: TGGGAATTCCTTCCGCAATCACTCACATCTCACTGA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETQDVVK*TEVLTN
Trigger: ATTTGTTAGCACTTCTGTTCACTTTACTACATCCTG...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGCATSH*QAVFKK
Trigger: TTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACA...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTGTGCCACTTCACACTaGCAGGCAGTGTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNCATSH*QAVFKK
Trigger: TTTCTTAAACACTGCCTGTCAGTGTGAAGTGGCACA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTCTCTGAACAGGTATaGCTGCCTCCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFFSEQV*LPPHKP
Trigger: TGGTTTATGGGGAGGCAGTCATACCTGTTCAGAGAA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNILQTS*SRAGLF
Trigger: GAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAAT...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTAATAATTTCAGGGGGTaGTTCTTTGTGGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETNNFRG*FFVDES
Trigger: ACTTTCATCCACAAAGAAGCACCCCCTGAAATTATT...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTGTATTCTGATTGAATaGCTTCCCACACCTATTGCA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCCILIE*LPTPIA
Trigger: TGCAATAGGTGTGGGAAGGCATTCAATCAGAATACA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACTGAACAGGTATGACTaGCTCCCCATAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLLNRYD*LPINQY
Trigger: ATACTGGTTTATGGGGAGGCAGTCATACCTGTTCAG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCACTTGCTCAGTCACATaGAGGCTTCCTGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFTCSVT*RLPVLS
Trigger: ACTCAGAACAGGAAGCCTGCATGTGACTGAGCAAGT...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCGTCAGTAGCAAAATGTaGTATCCTGATTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCVSSKM*YPDFQG
Trigger: TCCCTGAAAATCAGGATAGCACATTTTGCTACTGAC...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTCAGGTCTGGAAAACTaGGAACCGGAGAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFSGLEN*EPEKER
Trigger: TCTTTCTTTCTCCGGTTCCCAGTTTTCCAGACCTGA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCTCTCTTCGCTTTGATTaGAAAACACTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFISLRFD*KTLQVW
Trigger: CCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGA...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCTTGTTTACCCAGCCTaGACAAGTCTCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGLVYPA*TSLSSN
Trigger: ATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAG...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFPKPPS*KRHDSA
Trigger: TGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGG...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACGGGGGTGCTTCTTTGTaGATGAAAGTTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNGGASL*MKVILP
Trigger: TGGGAGAATAACTTTCATCCACAAAGAAGCACCCCC...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCAGTCACCTCAAAGCTTaGAAGAATCAGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFISHLKA*KNQERP
Trigger: AGGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTCAGGTCTGGAAAACTaGGAACCTCACTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFSGLEN*EPHCEI
Trigger: GATCTCACAGTGAGGTTCCCAGTTTTCCAGACCTGA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449836.5
ENST00000630464.2
CDS-3UTR TCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFIVSSL*LENTSG
Trigger: ACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGAT...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACACGTGTAACAAGGCTTaGGGTCAAAAGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNTCNKA*GQKQAF
Trigger: AAAAGCTTGCTTTTGACCTCAAGCCTTGTTACACGT...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCACGTGTAACAAGGCTTaGGGTCAAAAGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGTCNKA*GQKQAF
Trigger: AAAAGCTTGCTTTTGACCTCAAGCCTTGTTACACGT...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCATGTTGAACAAGGAATaGACTACGACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCMLNKE*TTTKGF
Trigger: AAAGCCTTTAGTCGTAGTTCATTCCTTGTTCAACAT...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCATGTTGAACAAGGAATaGACTACGACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASMLNKE*TTTKGF
Trigger: AAAGCCTTTAGTCGTAGTTCATTCCTTGTTCAACAT...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAGTGTTCAGTGAGATGTaGGTGATTGCGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTVFSEM*VIAEGI
Trigger: AATTCCTTCCGCAATCACTCACATCTCACTGAACAC...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTGTATTCTGATTGAATaGCTTCCCACACCTATTGCA +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGCILIE*LPTPIA
Trigger: TGCAATAGGTGTGGGAAGGCATTCAATCAGAATACA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCAAAAACATCTCAACCTaGCAGCCAACGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFKNIST*QPTKMG
Trigger: ACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTT...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACCTTGTTTACCCAGCCTaGACAAGTCTCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNLVYPA*TSLSSN
Trigger: ATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAG...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACTTGTTTACCCAGCCTaGACAAGTCTCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLLVYPA*TSLSSN
Trigger: ATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LPAPLLPVRFVVILARETSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCGGGCTGCCTCAAATCTaGAGGCTAGACTTAGCACTA +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPGLPQI*RLDLAL
Trigger: TAGTGCTAAGTCTAGCCTCCAGATTTGAGGCAGCCC...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACGAAAGCCTTCTTTACTaGCAGATCTATAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNESLLY*QIYRGQ
Trigger: CTGACCTCTATAGATCTGCCAGTAAAGAAGGCTTTC...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAAGTCACCTCAAAGCTTaGAAGAATCAGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSHLKA*KNQERP
Trigger: AGGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACT...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTGTGTCTCTCTCCTCTaGTCTCTGTACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPCVSLL*SLYTNS
Trigger: GCTGTTGGTGTACAGAGACCAGAGGAGAGAGACACA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATG +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFILKLNF*VAVKNM
Trigger: CATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAG...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTIVSSL*LENTSG
Trigger: ACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGAT...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGTGCTTCTTTGTGGATaGAAGTTATTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLVLLCG*KLFSQN
Trigger: GTTTTGGGAGAATAACTTTCATCCACAAAGAAGCAC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCGTGCTTCTTTGTGGATaGAAGTTATTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGVLLCG*KLFSQN
Trigger: GTTTTGGGAGAATAACTTTCATCCACAAAGAAGCAC...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTLLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFLLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTTCTCTGGTGTTCAGTaGGATGTGAGTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPFSGVQ*DVSDCG
Trigger: TCCGCAATCACTCACATCTCACTGAACACCAGAGAA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCGTGAGGCAGGTGTTCTaGTTAAAGCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPVRQVF*LKPFPH
Trigger: ATGTGGAAAGGGCTTTAATCAGAACACCTGCCTCAC...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGAGAGTTTTCCTTCATaGCCTCACATGCATATTTTT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIESFPS*PHMHIF
Trigger: AAAAATATGCATGTGAGGGCATGAAGGAAAACTCTC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCAATAATTTCAGGGGGTaGTTCTTTGTGGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: PPFLETFLSEYSSQGSFINNFRG*FFVDES
Trigger: ACTTTCATCCACAAAGAAGCACCCCCTGAAATTATT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTGTATTCTGATTGAATaGCTTCCCACACCTATTGCA +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNCILIE*LPTPIA
Trigger: TGCAATAGGTGTGGGAAGGCATTCAATCAGAATACA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCGTCAGTAGCAAAATGTaGTATCCTGATTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFVSSKM*YPDFQG
Trigger: TCCCTGAAAATCAGGATAGCACATTTTGCTACTGAC...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGTCAGTAGCAAAATGTaGTATCCTGATTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLVSSKM*YPDFQG
Trigger: TCCCTGAAAATCAGGATAGCACATTTTGCTACTGAC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATCTCTTCGCTTTGATTaGAAAACACTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTSLRFD*KTLQVW
Trigger: CCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCTGATGTTTAGTGAGTaGGGTGCTCTGAGTAAACGC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPLMFSE*GALSKR
Trigger: GCGTTTACTCAGAGCACCCCACTCACTAAACATCAG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCCTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATG +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFLKLNF*VAVKNM
Trigger: CATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAG...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACATGTTGAACAAGGAATaGACTACGACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNMLNKE*TTTKGF
Trigger: AAAGCCTTTAGTCGTAGTTCATTCCTTGTTCAACAT...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCATGTTCAGTAAGAGATaGGCTATGAGCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFMFSKR*AMSKGF
Trigger: AAAGCCTTTGCTCATAGCTCATCTCTTACTGAACAT...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNQDVVK*TEVLTN
Trigger: ATTTGTTAGCACTTCTGTTCACTTTACTACATCCTG...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAAATAATTTCAGGGGGTaGTTCTTTGTGGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLNNFRG*FFVDES
Trigger: ACTTTCATCCACAAAGAAGCACCCCCTGAAATTATT...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCAATAATTTCAGGGGGTaGTTCTTTGTGGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGNNFRG*FFVDES
Trigger: ACTTTCATCCACAAAGAAGCACCCCCTGAAATTATT...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATGTATTCTGATTGAATaGCTTCCCACACCTATTGCA +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTCILIE*LPTPIA
Trigger: TGCAATAGGTGTGGGAAGGCATTCAATCAGAATACA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCGTCAGTAGCAAAATGTaGTATCCTGATTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFVSSKM*YPDFQG
Trigger: TCCCTGAAAATCAGGATAGCACATTTTGCTACTGAC...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACACTGAAGCTCAATTTCTaGGTAGCAGTTAAGAACATG +
Preference number: 4 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTLKLNF*VAVKNM
Trigger: CATGTTCTTAACTGCTACCCAGAAATTGAGCTTCAG...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTTACTTGTTTCCCACTaGTGCAGACTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPLLVSH*CRLSSV
Trigger: TACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR GCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAAAAACATCTCAACCTaGCAGCCAACGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPKNIST*QPTKMG
Trigger: ACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTT...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCTTGTTTACCCAGCCTaGACAAGTCTCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPLVYPA*TSLSSN
Trigger: ATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCGTGCTTCTTTGTGGATaGAAGTTATTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPVLLCG*KLFSQN
Trigger: GTTTTGGGAGAATAACTTTCATCCACAAAGAAGCAC...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCAGGATGTAGTAAAGTaGACAGAAGTGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPQDVVK*TEVLTN
Trigger: ATTTGTTAGCACTTCTGTTCACTTTACTACATCCTG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR TCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCATAAACCAGTATCATaGATTCTAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPHKPVS*ILTWSP
Trigger: AGGAGACCAAGTTAGAATTCATGATACTGGTTTATG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTGGTATTCATCCTCTTaGAACCTCTTTACTACTATC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPWYSSS*NLFTTI
Trigger: GATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CCA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTCAAATGTAGAATCTTaGTATTCATCCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPSNVES*YSSSWN
Trigger: GTTCCAAGAGGATGAATACCAAGATTCTACATTTGA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: LPAPLLPVRFVVILARETDHFHR*GASPMV
Trigger: TACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASDHFHR*GASPMV
Trigger: TACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIDHFHR*GASPMV
Trigger: TACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTTGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LPAPLLPVRFVVILARETCSRAG*FLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCA...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTAGCTCAGGGGGTGCTTCTTaGTGGATGAAAGTTATTCTC +
Preference number: 5 (lower is better)
Translates to: CLLFTGPLPQVGSLPHGSSGGAS*WMKVIL
Trigger: GAGAATAACTTTCATCCACAAAGAAGCACCCCCTGA...GCTACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWDRLFA*IGKHFR
Trigger: CCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATC...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCCCCATGGTCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: FLSPFHRTTSTGWEPPPWSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...CCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASCSRAG*FLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTCAGGGGGTGCTTCTTaGTGGATGAAAGTTATTCTC +
Preference number: 5 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPSGGAS*WMKVIL
Trigger: GAGAATAACTTTCATCCACAAAGAAGCACCCCCTGA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTCTGTGTGCAGAGAGTaGGACATTTACTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPSVCRE*DIYFGL
Trigger: CAGACCAAAGTAAATGTCCAACTCTCTGCACACAGA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFDHFHR*GASPMV
Trigger: TACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTC...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCTGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PPFLETFLSEYSSQGSFICSRAG*FLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCA...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: LPAPLLPVRFVVILARETESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPAPLLPVRFVVILARETDRLFA*IGKHFR
Trigger: CCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATC...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLCSRAG*FLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCGACCACTTCCACAGGTaGGGAGCCTCCCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPDHFHR*GASPMV
Trigger: TACCATGGGGGAGGCTCCCAACCTGTGGAAGTGGTC...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TTACTTGTTTCTGTCTCCTTTTCACAGGACCACTTCCACAGGTTGGGAGCCTCCTCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: LLVSVSFSQDHFHRLGASSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...GGAGGCTCCCAACCTGTGGAAGTGGTCCTGTGAAAAGGAGACAGAAACAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCCTCCAGGAACTCTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTTTGGTATTCATCCTCTaGGAACCTCTTTACTACTAT +
Preference number: 5 (lower is better)
Translates to: PSRNSTCPSTPSQIRSHPLVFIL*EPLYYY
Trigger: ATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAA...AGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAGAGTTCCTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCAGGGGGTGCTTCTTaGTGGATGAAAGTTATTCTC +
Preference number: 5 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSGGAS*WMKVIL
Trigger: GAGAATAACTTTCATCCACAAAGAAGCACCCCCTGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCTCTGTGTGCAGAGAGTaGGACATTTACTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCSVCRE*DIYFGL
Trigger: CAGACCAAAGTAAATGTCCAACTCTCTGCACACAGA...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCTCCATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: PPFLETFLSEYSSQGSFIDRLFA*IGKHFR
Trigger: CCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATC...GATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACGAGTCACCTCAAAGCTaGGAAGAATCAGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNESPQS*EESGKT
Trigger: GGTCTTTCCTGATTCTTCCAAGCTTTGAGGTGACTC...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CTACCTGCCCCTCTACTCCCAGTCAGATTCGTAGTCATCCTCGCTAGAGAAACTCATTTTGTTAGGACATaGTTAGTCCTAGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LPAPLLPVRFVVILARETHFVRT*LVLVCL
Trigger: GAGACACACTAGGACTAACAATGTCCTAACAAAATG...AGTTTCTCTAGCGAGGATGACTACGAATCTGACTGGGAGTAGAGGGGCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS GCA 90 bp AACCTCTTTACTACTATCCCTGATGAGTCAATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTCTTGTTTACCCAGCCTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: NLFTTIPDESILQTS*SRAGLFLFTQPGQV
Trigger: GACTTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAATTGACTCATCAGGGATAGTAGTAAAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTAGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLDRLFA*IGKHFR
Trigger: CCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATC...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: KSRNFFLPCIPRCPPQVGDRLFA*IGKHFR
Trigger: CCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATC...GCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPCSRAG*FLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTATCAGGGGGTGCTTCTTaGTGGATGAAAGTTATTCTC +
Preference number: 5 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLSGGAS*WMKVIL
Trigger: GAGAATAACTTTCATCCACAAAGAAGCACCCCCTGA...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CATTTCTGGAAACATTCCTCTCAGAGTACAGTAGCCAAGGCTCCTTCATCCTTCTCAGGGGGTGCTTCTTaGTGGATGAAAGTTATTCTC +
Preference number: 5 (lower is better)
Translates to: HFWKHSSQSTVAKAPSSFSGGAS*WMKVIL
Trigger: GAGAATAACTTTCATCCACAAAGAAGCACCCCCTGA...GAAGGATGAAGGAGCCTTGGCTACTGTACTCTGAGAGGAATGTTTCCAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGGAATTTCTTTCTACCCTGTATTCCCAGATGCCCACCTCAAGTAGGCTCTGCCATTTTGTTAGGACATaGTTAGTCCTAGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: QEFLSTLYSQMPTSSRLCHFVRT*LVLVCL
Trigger: GAGACACACTAGGACTAACAATGTCCTAACAAAATG...GCAGAGCCTACTTGAGGTGGGCATCTGGGAATACAGGGTAGAAAGAAATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS TCA 90 bp TTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: FSSLHIQHPQIVSSL*LENTSGLENWEPEK
Trigger: TTTCTCCGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS TCA 90 bp TTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCTCACTGT +
Preference number: 5 (lower is better)
Translates to: FSSLHIQHPQIVSSL*LENTSGLENWEPHC
Trigger: ACAGTGAGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411443.1
ENST00000449836.5
ENST00000629892.1
ENST00000630464.2
CDS TCA 90 bp TTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTTaGTTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: FSSLHIQHPQIVSSL*LENTSGLENWEPVR
Trigger: TCTCACAGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436624.7
ENST00000628995.3
CDS-3UTR CAA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTCTCTCTTCAGCTCCTaGCATATTCAACATCCACAG +
Preference number: 5 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFSLFSS*HIQHPQ
Trigger: CTGTGGATGTTGAATATGCAAGGAGCTGAAGAGAGA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPRAGLF*FTQPGQ
Trigger: TTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCT...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp TCACATGGGGAGACAGTGGCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTCTGTGTGCAGAGAGTaGGACATTTACTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SHGETVAMCRLYLKSRNFSVCRE*DIYFGL
Trigger: CAGACCAAAGTAAATGTCCAACTCTCTGCACACAGA...GAAATTCCTGCTTTTCAGATAAAGCCTACACATTGCCACTGTCTCCCCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AGGCAGTGTTTAAGAAAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACATCTGTGTGCAGAGAGTaGGACATTTACTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: RQCLRKTSQPASQRKWVTSVCRE*DIYFGL
Trigger: CAGACCAAAGTAAATGTCCAACTCTCTGCACACAGA...TGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTTTCTTAAACACTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCATTTTGTTAGGACATaGTTAGTCCTAGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGHFVRT*LVLVCL
Trigger: GAGACACACTAGGACTAACAATGTCCTAACAAAATG...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp AAAACATCTCAACCTGCCAGCCAACGAAAATGGGTGACAAGTCAGAATGTGGGGTTGGTATTCATCCTCTaGGAACCTCTTTACTACTAT +
Preference number: 5 (lower is better)
Translates to: KTSQPASQRKWVTSQNVGLVFIL*EPLYYY
Trigger: ATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAA...CCCCACATTCTGACTTGTCACCCATTTTCGTTGGCTGGCAGGTTGAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp CAGCCTAGGCAAACTTACAATAGACAGGTGTACACCTTAGTACAGGCAGGGTTACATTTTGTTAGGACATaGTTAGTCCTAGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: QPRQTYNRQVYTLVQAGLHFVRT*LVLVCL
Trigger: GAGACACACTAGGACTAACAATGTCCTAACAAAATG...TAACCCTGCCTGTACTAAGGTGTACACCTGTCTATTGTAAGTTTGCCTAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS TCA 90 bp AAAGACATCTTGGTGATGACCACATCCTTCCAATCATGGATCATCTaGGCTGTCAGCAGTTTGTCAATGTCAAGGGTCAGCAAACATTTT +
Preference number: 5 (lower is better)
Translates to: KDILVMTTSFQSWII*AVSSLSMSRVSKHF
Trigger: AAAATGTTTGCTGACCCTTGACATTGACAAACTGCTGACAGCTCAGATGATCCATGATTGGAAGGATGTGGTCATCACCAAGATGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS-3UTR CAA 90 bp CCAACGAAAATGGGTGACAAGTCAGAATGTGGGGCAGGATGTAGTAAAGTGAACTTGGTATTCATCCTCTaGGAACCTCTTTACTACTAT +
Preference number: 5 (lower is better)
Translates to: PTKMGDKSECGAGCSKVNLVFIL*EPLYYY
Trigger: ATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAA...GTTCACTTTACTACATCCTGCCCCACATTCTGACTTGTCACCCATTTTCGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTCTGTGTGCAGAGAGTaGGACATTTACTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPSVCRE*DIYFGL
Trigger: CAGACCAAAGTAAATGTCCAACTCTCTGCACACAGA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCCATTTTGTTAGGACATaGTTAGTCCTAGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPHFVRT*LVLVCL
Trigger: GAGACACACTAGGACTAACAATGTCCTAACAAAATG...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS-3UTR CAA 90 bp GCAATGTGTAGGCTTTATCTGAAAAGCAGGAATTTCTTTCTACCCTGTATTCCCTTGGTATTCATCCTCTaGGAACCTCTTTACTACTAT +
Preference number: 5 (lower is better)
Translates to: AMCRLYLKSRNFFLPCIPLVFIL*EPLYYY
Trigger: ATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAA...GGGAATACAGGGTAGAAAGAAATTCCTGCTTTTCAGATAAAGCCTACACATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296091.8
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000630464.2
CDS TCA 72 bp TTGTCAATGTCAAGGGTCAGCAAACATTTTTCACTGTaGGATCCACGGACTCTCCGCGGAGCGGCGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LSMSRVSKHFSL*DPRTLRGAAQA
Trigger: CGCCTGCGCCGCTCCGCGGAGAGTCCGTGGATCTCACAGTGAAAAATGTTTGCTGACCCTTGACATTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS CAA 72 bp GAGTCAATTTTACAGACATCCTGCTCCAGAGCAGGCTaGTTCTTGTTTACCCAGCCTGGACAAGTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ESILQTSCSRAG*FLFTQPGQVSL
Trigger: AAGAGAGACTTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAATTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS CAA 90 bp CTTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCGGAGAA +
Preference number: 6 (lower is better)
Translates to: LQLLAYSTSTDRLFA*IGKHFRSGKLGTGE
Trigger: TTCTCCGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296091.8
ENST00000626630.2
CDS CAA 90 bp CTTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCTCACTG +
Preference number: 6 (lower is better)
Translates to: LQLLAYSTSTDRLFA*IGKHFRSGKLGTSL
Trigger: CAGTGAGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411443.1
ENST00000449836.5
ENST00000629892.1
ENST00000630464.2
CDS CAA 90 bp CTTCAGCTCCTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGGTCTGGAAAACTGGGAACCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LQLLAYSTSTDRLFA*IGKHFRSGKLGTCE
Trigger: CTCACAGGTTCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAGGAGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436624.7
ENST00000628995.3
CDS GCA 72 bp ACTACTATCCCTGATGAGTCAATTTTACAGACATCCTaGTCCAGAGCAGGCTTGTTCTTGTTTACCCAGCCT +
Preference number: 6 (lower is better)
Translates to: TTIPDESILQTS*SRAGLFLFTQP
Trigger: AGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAATTGACTCATCAGGGATAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS CAA 72 bp ATTTTACAGACATCCTGCTCCAGAGCAGGCTTGTTCTaGTTTACCCAGCCTGGACAAGTCTCTCTTCTAATG +
Preference number: 6 (lower is better)
Translates to: ILQTSCSRAGLF*FTQPGQVSLLM
Trigger: CATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAGAACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS CCA 72 bp TTGTGGATGAAAGTTATTCTCCCAAAACCTCCTTCCTaGAAAAGGCATGATTCAGCAATCTCCCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: LWMKVILPKPPS*KRHDSAISLGE
Trigger: CTCTCCTAGGGAGATTGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGGGAGAATAACTTTCATCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS CAA 72 bp CTTGCATATTCAACATCCACAGATCGTCTCTTCGCTTaGATTGGAAAACACTTCAGGTCTGGAAAACTGGGA +
Preference number: 6 (lower is better)
Translates to: LAYSTSTDRLFA*IGKHFRSGKLG
Trigger: TCCCAGTTTTCCAGACCTGAAGTGTTTTCCAATCAAAGCGAAGAGACGATCTGTGGATGTTGAATATGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2
CDS CCA 72 bp TTTTCTTCAAATGTAGAATCTTGGTATTCATCCTCTTaGAACCTCTTTACTACTATCCCTGATGAGTCAATT +
Preference number: 6 (lower is better)
Translates to: FSSNVESWYSSS*NLFTTIPDESI
Trigger: AATTGACTCATCAGGGATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAAGATTCTACATTTGAAGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296091.8
ENST00000411443.1
ENST00000436624.7
ENST00000449836.5
ENST00000626630.2
ENST00000628995.3
ENST00000629892.1
ENST00000630464.2