RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF500 (Homo sapiens)

Ensembl gene IDs: ENSG00000103199

Ensembl transcript IDs: ENST00000219478.11, ENST00000545009.1, ENST00000585977.1, ENST00000588602.1, ENST00000589422.1, ENST00000591026.1, ENST00000592425.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGAGCCACCGGCTGGAGCGTCGGCAAGGAGCCTGCCCCCATGTaGGTCCGCTGGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: PGATGWSVGKEPAPM*VRWCLCRSVPRRKP
Trigger: GGGCTTCCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 90 bp CCTGGTGATCAGGCTTTGGCACCGGGGCCTCCAGGAGCCACCGGCTaGAGCGTCGGCAAGGAGCCTGCCCCCATGTGGGTCCGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: PGDQALAPGPPGATG*SVGKEPAPMWVRWC
Trigger: GCACCAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR TCA 90 bp ACCTGGGACCAGGCCGAAAGGAAGGGCGAGGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGG +
Preference number: 1 (lower is better)
Translates to: TWDQAERKGEADAIS*CRGAGGPLSGHNSG
Trigger: CCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTGGTCCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 90 bp TGCCGCCAGAACCGGGCTCTGCCCCCATACGCTGCCCTCGCAGCCTaGCGGCCTCCGCTGTGGCTGCCTAGCTGTCAAGAGCAAAGGCTT +
Preference number: 1 (lower is better)
Translates to: CRQNRALPPYAALAA*RPPLWLPSCQEQRL
Trigger: AAGCCTTTGCTCTTGACAGCTAGGCAGCCACAGCGGAGGCCGCCAGGCTGCGAGGGCAGCGTATGGGGGCAGAGCCCGGTTCTGGCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 90 bp GAGGATGACGCCCATGAGATGGGGCCAAGCAGCAGGCAGCGACCATaGGATGGGGCCAAGCAGCAGCCAGTGGGAGGCCACAGCCTCGGC +
Preference number: 1 (lower is better)
Translates to: EDDAHEMGPSSRQRP*DGAKQQPVGGHSLG
Trigger: GCCGAGGCTGTGGCCTCCCACTGGCTGCTGCTTGGCCCCATCTCATGGTCGCTGCCTGCTGCTTGGCCCCATCTCATGGGCGTCATCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 90 bp CAAGTTCACGGGCACCTGGGACCAGGCCGAAAGGAAGGGCGAGGCTaGCGCCATCTCCTGATGCCGGGGAGCTGGAGGGCCTCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: QVHGHLGPGRKEGRG*RHLLMPGSWRASLW
Trigger: CCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTGGTCCCAGGTGCCCGTGAACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 90 bp CCTGCTGTCTGCCCCGTGGGAAGAGCAGAGAAATCATCACCACCTTaGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCCG +
Preference number: 1 (lower is better)
Translates to: PAVCPVGRAEKSSPP*APRCHGLRQHSRAP
Trigger: CGGCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp GGGGGCTCAGGCTGCGCTGGGGAGATGGGTGTCAGCAACGCTGGGTaGTTTGCTAGCTCCTGGAGTGTGGCCTGGCCACATCTAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GGSGCAGEMGVSNAG*FASSWSVAWPHLAG
Trigger: CCCAGCTAGATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGACACCCATCTCCCCAGCGCAGCCTGAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp CCAGTGCCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAA +
Preference number: 1 (lower is better)
Translates to: PVPSFLCGLGIPNVP*WPHTGPWEETGSWQ
Trigger: TTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR CCA 90 bp GAGAGGGGTTGGGACGTGGGGATGAGGCTGTATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAG +
Preference number: 1 (lower is better)
Translates to: ERGWDVGMRLYASSH*MLEAADGPSQALQE
Trigger: CTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATACAGCCTCATCCCCACGTCCCAACCCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR CCA 90 bp TCTGCTTGCCCCCTGCCAAGACCCGGCCCCTCCACAGGACAAGCCTaGTCTTCCTGGGTCCTGTTCCTTTGCCAGCACCGTCTTGCAGCC +
Preference number: 1 (lower is better)
Translates to: SACPLPRPGPSTGQA*SSWVLFLCQHRLAA
Trigger: GGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTGTCCTGTGGAGGGGCCGGGTCTTGGCAGGGGGCAAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 90 bp GATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTaGCACCGGGGCCTCCAGGAGCCACCGGCTGGAGCGTCGGCAAGG +
Preference number: 1 (lower is better)
Translates to: DESPGKGVSGLVIRL*HRGLQEPPAGASAR
Trigger: CCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR GCA 90 bp GCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTaGAGCAGACGAGGGGTCCCTCAAATTCATGTGCACCCAGACCTC +
Preference number: 1 (lower is better)
Translates to: AGDHVLGRLGYSRAP*SRRGVPQIHVHPDL
Trigger: GAGGTCTGGGTGCACATGAATTTGAGGGACCCCTCGTCTGCTGCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp TGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGAGCCTGTCCTTaGCCTTGTTCTGCACCCAGTGCCCAGCTTCCTCTGCGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: CVTCSGCHWTLRACP*PCSAPSAQLPLRPG
Trigger: CCCAGGCCGCAGAGGAAGCTGGGCACTGGGTGCAGAACAAGGGCAAGGACAGGCTCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR GCA 90 bp TCCAAAGCTGGCTCTGCCACCTGGGCAAGGTTTTCACGCTCCCAGTaGCCAGTTCCTCCACCCACAGAAGGAGAATCATGGCCGGGCGCG +
Preference number: 1 (lower is better)
Translates to: SKAGSATWARFSRSQ*PVPPPTEGESWPGA
Trigger: CGCGCCCGGCCATGATTCTCCTTCTGTGGGTGGAGGAACTGGGCACTGGGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 90 bp GGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATaGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCCGCCCTGC +
Preference number: 1 (lower is better)
Translates to: GRCQARHIPGNMSGR*NSGVLSRPRCLPPC
Trigger: GCAGGGCGGAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp CCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTaGTTTCCCGCCCCAGGTGTCTTCCGCCCTGCAGAGCAGCTATGG +
Preference number: 1 (lower is better)
Translates to: PVTSQATCQEDGTQG*FPAPGVFRPAEQLW
Trigger: CCATAGCTGCTCTGCAGGGCGGAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp AACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTaGGGTACAGCAGGGCTCCCTGCAGCAGACGAGGGGTCCCTCAAA +
Preference number: 1 (lower is better)
Translates to: NSGRMKKLETTSWEG*GTAGLPAADEGSLK
Trigger: TTTGAGGGACCCCTCGTCTGCTGCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp CCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTaGGAAGGCTGGGGTACAGCAGGGCTCCCTGCAGCAGACGAGGGG +
Preference number: 1 (lower is better)
Translates to: PFGNSGRMKKLETTS*EGWGTAGLPAADEG
Trigger: CCCCTCGTCTGCTGCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp GCTGGGGAGATGGGTGTCAGCAACGCTGGGTGCTTTGCTAGCTCCTaGAGTGTGGCCTGGCCACATCTAGCTGGGTACCTCATGCCCCAT +
Preference number: 1 (lower is better)
Translates to: AGEMGVSNAGCFASS*SVAWPHLAGYLMPH
Trigger: ATGGGGCATGAGGTACCCAGCTAGATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGACACCCATCTCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 90 bp GGAATGCTGCAGAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATaGAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAG +
Preference number: 1 (lower is better)
Translates to: GMLQSPGLHLETLAG*RSWRPRPGKAGVQQ
Trigger: CTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 90 bp GCAGGCACCTGGGACTCACAGCTCCTACAAAACTCTCCCATCACGTaGGTGCTGAGGATGACGCCCATGAGATGGGGCCAAGCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: AGTWDSQLLQNSPIT*VLRMTPMRWGQAAG
Trigger: GCCTGCTGCTTGGCCCCATCTCATGGGCGTCATCCTCAGCACTCACGTGATGGGAGAGTTTTGTAGGAGCTGTGAGTCCCAGGTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp AAGGGGAGTGAGGTAGGAAGTCAGACCTGCGTCCAAAGCTGGCTCTaGCACCTGGGCAAGGTTTTCACGCTCCCAGTGCCCAGTTCCTCC +
Preference number: 1 (lower is better)
Translates to: KGSEVGSQTCVQSWL*HLGKVFTLPVPSSS
Trigger: GGAGGAACTGGGCACTGGGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGACGCAGGTCTGACTTCCTACCTCACTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCAACTGGATCCCAGGTCCTTCATTCT +
Preference number: 1 (lower is better)
Translates to: PRALGTTPFSTGHPP*HHRRPPTGSQVLHS
Trigger: AGAATGAAGGACCTGGGATCCAGTTGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 90 bp GGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTaGAATGCTGCAGAGCCCCGGGCTCCATTTGGAAACTCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: GVFRPAEQLWICKGD*NAAEPRAPFGNSGR
Trigger: CCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp GGTGTCAGCAACGCTGGGTGCTTTGCTAGCTCCTGGAGTGTGGCCTaGCCACATCTAGCTGGGTACCTCATGCCCCATGAGAGATCCCAG +
Preference number: 1 (lower is better)
Translates to: GVSNAGCFASSWSVA*PHLAGYLMPHERSQ
Trigger: CTGGGATCTCTCATGGGGCATGAGGTACCCAGCTAGATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 90 bp ACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTaGATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACA +
Preference number: 1 (lower is better)
Translates to: TKDSITLLVLATHPP*MCTDQWLPRSTGQT
Trigger: TGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 90 bp AATGGAGCATCCCAGGCTGGGATGAAGGCCAAGGCCACCTACCTATaGGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGG +
Preference number: 1 (lower is better)
Translates to: NGASQAGMKAKATYL*GTTTAWLERSRTQW
Trigger: CCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCTTGGCCTTCATCCCAGCCTGGGATGCTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp TGCTGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATaGTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: CWPHTGPWEETGSWQ*FRTRLSSSFLNSVP
Trigger: GGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR GCA 90 bp CCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTaGAGAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAA +
Preference number: 1 (lower is better)
Translates to: PPCRAAMDLQRGLEC*RAPGSIWKLWQDEE
Trigger: TTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp CTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATaGTGCAGAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATGAA +
Preference number: 1 (lower is better)
Translates to: LPPCRAAMDLQRGLE*CRAPGSIWKLWQDE
Trigger: TTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTaGACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCT +
Preference number: 1 (lower is better)
Translates to: DSITLLVLATHPPWM*TDQWLPRSTGQTKA
Trigger: AGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp GGCTGGGATGAAGGCCAAGGCCACCTACCTATGAGGAACAACCACTaGCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCC +
Preference number: 1 (lower is better)
Translates to: GWDEGQGHLPMRNNH*LAGTFQNPVVSIAA
Trigger: GGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCTTGGCCTTCATCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp GGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGGCCCTaGTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGT +
Preference number: 1 (lower is better)
Translates to: GVSSHQALYQAKDRP*LAVVTGRQDQGYRC
Trigger: ACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp CCTGTTTGTCTCCCCAACCTTGTCTCCAGGATGTGTCCTGCTGTCTaGCCCGTGGGAAGAGCAGAGAAATCATCACCACCTTGGGCCCCA +
Preference number: 1 (lower is better)
Translates to: PVCLPNLVSRMCPAV*PVGRAEKSSPPWAP
Trigger: TGGGGCCCAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAGGACACATCCTGGAGACAAGGTTGGGGAGACAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 90 bp GATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCCATTTaGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGA +
Preference number: 1 (lower is better)
Translates to: DLQRGLECCRAPGSI*KLWQDEEAGDHVLG
Trigger: TCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp CTCATCAAGCCTTGTACCAGGCAAAAGACAGGCCCTGCTTGGCCGTaGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTG +
Preference number: 1 (lower is better)
Translates to: LIKPCTRQKTGPAWP*SLAAKIRATDVCSL
Trigger: CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGGTACAAGGCTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp TACTGTGTCTGTCAAGGCAAGGGGAGTGAGGTAGGAAGTCAGACCTaGGTCCAAAGCTGGCTCTGCCACCTGGGCAAGGTTTTCACGCTC +
Preference number: 1 (lower is better)
Translates to: YCVCQGKGSEVGSQT*VQSWLCHLGKVFTL
Trigger: GAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGACGCAGGTCTGACTTCCTACCTCACTCCCCTTGCCTTGACAGACACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp CTGGGCACCTGTTTGTCTCCCCAACCTTGTCTCCAGGATGTGTCCTaGTGTCTGCCCCGTGGGAAGAGCAGAGAAATCATCACCACCTTG +
Preference number: 1 (lower is better)
Translates to: LGTCLSPQPCLQDVS*CLPRGKSREIITTL
Trigger: CAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAGGACACATCCTGGAGACAAGGTTGGGGAGACAAACAGGTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 90 bp TCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGGCCCTGCTTaGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGC +
Preference number: 1 (lower is better)
Translates to: SLLIKPCTRQKTGPA*PWSLAAKIRATDVC
Trigger: GCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 90 bp ACAAGCCTGGTCTTCCTGGGTCCTGTTCCTTTGCCAGCACCGTCTTaGAGCCCCGTCTTCACGGGATGCTTTTGTAACTGCTGTGATCAG +
Preference number: 1 (lower is better)
Translates to: TSLVFLGPVPLPAPS*SPVFTGCFCNCCDQ
Trigger: CTGATCACAGCAGTTACAAAAGCATCCCGTGAAGACGGGGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 90 bp GACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTaGAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAACCGTGGAA +
Preference number: 1 (lower is better)
Translates to: DQWLPRSTGQTKAGR*RLLTLERQSGATVE
Trigger: TTCCACGGTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 90 bp CCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTaGCCTACGACTTCCGAGATGACTAAACCCACCAAGGACTCTATC +
Preference number: 1 (lower is better)
Translates to: PLPGWNVPEPSGFHS*PTTSEMTKPTKDSI
Trigger: GATAGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTaGAAGGTGAAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAAC +
Preference number: 1 (lower is better)
Translates to: VHRPVAPTQHRPDKS*KVKASYLRKTKWGN
Trigger: GTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 90 bp TCCAAGTTCAACTCTGAATTACTGTGTCTGTCAAGGCAAGGGGAGTaGGGTAGGAAGTCAGACCTGCGTCCAAAGCTGGCTCTGCCACCT +
Preference number: 1 (lower is better)
Translates to: SKFNSELLCLSRQGE*GRKSDLRPKLALPP
Trigger: AGGTGGCAGAGCCAGCTTTGGACGCAGGTCTGACTTCCTACCTCACTCCCCTTGCCTTGACAGACACAGTAATTCAGAGTTGAACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 90 bp TTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATaGCTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCA +
Preference number: 1 (lower is better)
Translates to: FQNPVVSIAALRLPR*LNPPRTLSHCLSWP
Trigger: TGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 90 bp GGCTGTGCCAAAAGGTCAAATGTGCACGTATATACAGTGACTAGGTaGCAAATGCAATGGAGCATCCCAGGCTGGGATGAAGGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: GCAKRSNVHVYTVTR*QMQWSIPGWDEGQG
Trigger: GCCTTGGCCTTCATCCCAGCCTGGGATGCTCCATTGCATTTGTCACCTAGTCACTGTATATACGTGCACATTTGACCTTTTGGCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 90 bp GGAACCTGGGCTGTGCCAAAAGGTCAAATGTGCACGTATATACAGTaGCTAGGTGACAAATGCAATGGAGCATCCCAGGCTGGGATGAAG +
Preference number: 1 (lower is better)
Translates to: GTWAVPKGQMCTYIQ*LGDKCNGASQAGMK
Trigger: CTTCATCCCAGCCTGGGATGCTCCATTGCATTTGTCACCTAGTCACTGTATATACGTGCACATTTGACCTTTTGGCACAGCCCAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR-3UTR CCA 90 bp GGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCCCGGCCACAGGCCGGGCAGGGCTTCCTCTGCGGCCTaGGCATCCCAAATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GACAGRCPGGSPGHRPGRASSAA*ASQMSP
Trigger: AGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC...CCTGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR TCA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCCATCCCAGGCTGGGATaGAGGCCAAGGCCACCTACC +
Preference number: 2 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRHPRLG*RPRPPT
Trigger: GGTAGGTGGCCTTGGCCTTCATCCCAGCCTGGGATG...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR TCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGGGGCCGCCTCTTGGCTaGTCAGGCCTGACCAAGCCC +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQGPPLG*SGLTKP
Trigger: GGGCTTGGTCAGGCCTGATCAGCCAAGAGGCGGCCC...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCTACAGCAGGGCTCCCTaGAGCAGACGAGGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRYSRAP*SRRGVP
Trigger: AGGGACCCCTCGTCTGCTGCAGGGAGCCCTGCTGTA...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGCTTGTGCAGGTCGGTaGCCCGGCGGAAGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTACAGR*PGGSPG
Trigger: GCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGC...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR TCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGGATGCTGGAGGCAGCTaGTGGACCCTCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQDAGGS*WTLPGP
Trigger: AGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATC...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR TCA 90 bp GCCTCTTGGCTGATCAGGCCTGACCAAGCCCCTGACTGGGGCTGGCCTCTGACCGATGCTGGAGGCAGCTaGTGGACCCTCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: ASWLIRPDQAPDWGWPLTDAGGS*WTLPGP
Trigger: AGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATC...GGTCAGAGGCCAGCCCCAGTCAGGGGCTTGGTCAGGCCTGATCAGCCAAGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCCCAGGAGCCACCGGCTaGAGCGTCGGCAAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ASSAAWASQMSPAGLILGPGATG*SVGKEP
Trigger: AGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGG...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp CTCCAGGAGCCACCGGCTGGAGCGTCGGCAAGGAGCCTGCCCCCATGTGGGTCCCTCAGAGCCTGTCCTTaGCCTTGTTCTGCACCCAGT +
Preference number: 2 (lower is better)
Translates to: LQEPPAGASARSLPPCGSLRACP*PCSAPS
Trigger: ACTGGGTGCAGAACAAGGGCAAGGACAGGCTCTGAG...GGACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GGCCCCGGCCCTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGGCTTCCTCTGCGGCCTaGGCATCCCAAATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GPGPGEMSGPSHPRQHVRASSAA*ASQMSP
Trigger: AGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC...CCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAGGGCCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp CGGGGCAGGTGTACGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTGGTGGGGACACAGGAGAGGGGTTaGGACGTGGGGATGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RGRCTACQPHGKPVFLVGTQERG*DVGMRL
Trigger: CAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGT...CCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGTGGGCTGGGGGCTGCTaGCTGGAGAATCGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQWAGGC*LENRAS
Trigger: AGAGGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCA...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCAGGCCCCTGGCATCGTaGCGAGAGCACTCGGTACCA +
Preference number: 2 (lower is better)
Translates to: ASSAAWASQMSPAGLILGRPLAS*REHSVP
Trigger: TGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCT...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCGGGTGGCCAGGCCCCTaGCATCGTGCCGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTGWPGP*HRAEST
Trigger: AGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCC...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCCTGGTGATCAGGCTTTaGCACCGGGGCCTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ASSAAWASQMSPAGLILGLVIRL*HRGLQE
Trigger: CTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAG...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR TCA 90 bp TGGCTGAAGCCCCTGCTCTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGAGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: WLKPLLCVTCSGCHWTLRADAIS*CRGAGG
Trigger: CCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGC...TCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAGAGCAGGGGCTTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCAAATGTCCCCTGCTaGCCTCATACTGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQPNVPC*PHTGPW
Trigger: CCATGGCCCAGTATGAGGCCAGCAGGGGACATTTGG...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCGCAGCCACTGGATGCTaGAGGCAGCTGATGGACCCT +
Preference number: 2 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCAATGC*RQLMDP
Trigger: AGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGC...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCCTGGGGGCTGCTGGCTaGAGAATCGAGCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ASSAAWASQMSPAGLILGLGAAG*RIEPLP
Trigger: AGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTGCCATCACTGGAGGGCCTCTCTCTaGCCACAACAGCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PRALGTTPFSTGHPPCHHWRASL*PQQRAP
Trigger: AGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCA...GTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTCCCATGTGGGTCCGCTaGTGCTTGTGCAGGTCGGTG +
Preference number: 2 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTPMWVR*CLCRSV
Trigger: CACCGACCTGCACAAGCACCAGCGGACCCACATGGG...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CAA 90 bp CTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGAGCCTGTCCTaGCCCTTGTTCTGCACCCAGTGCCCAGCTTCCTCTGCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LCHLFWLPLDTQSLS*PLFCTQCPASSAAW
Trigger: CCAGGCCGCAGAGGAAGCTGGGCACTGGGTGCAGAACAAGGGCAAGGACAGGCTCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR GCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQIPNVP*WPHTGP
Trigger: TGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGAT...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR CCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCTCATACTGGGCCATaGGAGGAAACGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: WKATFQTLRGQEQTQPWAPHTGP*EETGSW
Trigger: CCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGG...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGTATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQYASSH*MLEAAD
Trigger: ATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATA...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR TCA 90 bp CGGGGCAGGTGTACGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTGGTGGGGTGTCTAGCAGTTTCCTaGATTCTGTGCCCAGGGATG +
Preference number: 2 (lower is better)
Translates to: RGRCTACQPHGKPVFLVGCLAVS*ILCPGM
Trigger: CATCCCTGGGCACAGAATTCAGGAAACTGCTAGACA...CCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGCCAGCAGCCACTGGATaGTGGAGGCAGCTGATGGAC +
Preference number: 2 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLPAATG*WRQLMD
Trigger: GTCCATCAGCTGCCTCCAGCATCCAGTGGCTGCTGG...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTGCCATCACCCTCATACTGGGCCATaGGAGGAAACGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PRALGTTPFSTGHPPCHHPHTGP*EETGSW
Trigger: CCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGG...GTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGGCCACTCACCCACCGTaGATGTGCACAGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLATHPP*MCTDQW
Trigger: CCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGC...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGTGGGTCCATGCATCTTaGCTCCTCCCCAGAAAGGTA +
Preference number: 2 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQWVHAS*LLPRKV
Trigger: TACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCA...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp CGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCACGGGCAGCTGGCAATaGTTTCGGACCAGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: RPAEQLWICKGDWNAAEPTGSWQ*FRTRLS
Trigger: AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGT...GGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCGTGTGCACCCTCTGGTaGGTGCTGAAGTTGGAGCGG +
Preference number: 2 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSVCTLW*VLKLER
Trigger: CCGCTCCAACTTCAGCACGCACCAGAGGGTGCACAC...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTTGTTCTGGCTGCCACTaGACACTCAGAGCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTCSGCH*TLRACP
Trigger: AGGACAGGCTCTGAGTGTCCAGTGGCAGCCAGAACA...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR CCA 90 bp GCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCTGTGTCACCTGTTCTaGCTGCCACTGGACACTCAG +
Preference number: 2 (lower is better)
Translates to: APGIVPRALGTTPFSTGHLCHLF*LPLDTQ
Trigger: CTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAG...ATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp CCACATTCGGGGCAGGTGTACGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTCTGAGTGTGTCTCTGTaGCTGAAGCCCCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PHSGQVYGLSAPWEARLPLSVSL*LKPLLC
Trigger: ACAGAGCAGGGGCTTCAGCCACAGAGACACACTCAG...AGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCCCGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR GCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGAGGTGTCTTCCGCCCTaGAGAGCAGCTATGGATCTG +
Preference number: 2 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLRCLPP*RAAMDL
Trigger: CAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCT...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCCCTGCAGAGCAGCTATaGATCTGCAAAGGGGACTGG +
Preference number: 2 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTPAEQL*ICKGDW
Trigger: CCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGG...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp ACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCAGGAACAACCACTGCCTaGCTGGAACGTTCCAGAACC +
Preference number: 2 (lower is better)
Translates to: TRQPHSADTGQSTQGPEAGTTTA*LERSRT
Trigger: GGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCC...TGCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp ATCAGCCCTGACCTGGGCACCTGTTTGTCTCCCCAACCTTGTCTCCAGGATGTGCTTGGCCGTGGTCACTaGCCGCCAAGATCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: ISPDLGTCLSPQPCLQDVLGRGH*PPRSGL
Trigger: TAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAG...CACATCCTGGAGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTCAGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR TCA 90 bp GTGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCTGTCTAGCAGTTTCCTaGATTCTGTGCCCAGGGATG +
Preference number: 2 (lower is better)
Translates to: VEGHIPDTKGPGANAALGCLAVS*ILCPGM
Trigger: CATCCCTGGGCACAGAATTCAGGAAACTGCTAGACA...GCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSYASSH*MLEAAD
Trigger: ATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATA...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR-3UTR CCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCACACAGGAGAGGGGTTaGGACGTGGGGATGAGGCTG +
Preference number: 2 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCTQERG*DVGMRL
Trigger: CAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGT...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CCA 90 bp ATCAGCCCTGACCTGGGCACCTGTTTGTCTCCCCAACCTTGTCTCCAGGATGTGATCTGCAAAGGGGACTaGAATGCTGCAGAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: ISPDLGTCLSPQPCLQDVICKGD*NAAEPR
Trigger: CCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGAT...CACATCCTGGAGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTCAGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 90 bp GTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGGCCCTGCTaGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTG +
Preference number: 2 (lower is better)
Translates to: VSSHQALYQAKDRPC*AVVTGRQDQGYRCL
Trigger: CAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACGTGTGTGTGCGCTGGTaGTTGGTCAAGTGGGACGTC +
Preference number: 2 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHVCVRW*LVKWDV
Trigger: GACGTCCCACTTGACCAAGCACCAGCGCACACACAC...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGCTGAGTGTGTCTCTGTaGCTGAAGCCCCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRLSVSL*LKPLLC
Trigger: ACAGAGCAGGGGCTTCAGCCACAGAGACACACTCAG...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 90 bp TCCGAGATGACTAAACCCACCAAGGACTCTATCACACTGCTTGTCTaGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SEMTKPTKDSITLLV*ATHPPWMCTDQWLP
Trigger: TGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAGTCATCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CAA 90 bp GATGCTTTTGTAACTGCTGTGATCAGCCCTGACCTGGGCACCTGTTaGTCTCCCCAACCTTGTCTCCAGGATGTGTCCTGCTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: DAFVTAVISPDLGTC*SPQPCLQDVSCCLP
Trigger: GGGCAGACAGCAGGACACATCCTGGAGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTCAGGGCTGATCACAGCAGTTACAAAAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGAGGACTCTATCACACTaGTTGTCTTGGCCACTCACC +
Preference number: 2 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRRTLSH*LSWPLT
Trigger: GGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCAACATGTCAGGAAGATaGAACTCAGGGGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSNMSGR*NSGVLS
Trigger: GGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTT...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR TCA 90 bp ACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCATATACAGTGACTAGGTaGCAAATGCAATGGAGCATC +
Preference number: 2 (lower is better)
Translates to: TRQPHSADTGQSTQGPEAYTVTR*QMQWSI
Trigger: GATGCTCCATTGCATTTGTCACCTAGTCACTGTATA...TGCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp GGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACTCTATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCA +
Preference number: 2 (lower is better)
Translates to: GFHSCPTTSEMTKPTKDSIPNVP*WPHTGP
Trigger: TGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGAT...AGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR GCA 90 bp AGATTCTCAAGGCCTTTGACCTTTATGAATCTAGACAGAATACTGGAAACCCCTCTCCAGGATGTGTCCTaGTGTCTGCCCCGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: RFSRPLTFMNLDRILETPLQDVS*CLPRGK
Trigger: CTTCCCACGGGGCAGACAGCAGGACACATCCTGGAG...AGGGGTTTCCAGTATTCTGTCTAGATTCATAAAGGTCAAAGGCCTTGAGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR TCA 90 bp AGATTCTCAAGGCCTTTGACCTTTATGAATCTAGACAGAATACTGGAAACCCCTCCAGACCTCAGAATGTaGCCTTATTTGGAAACACGG +
Preference number: 2 (lower is better)
Translates to: RFSRPLTFMNLDRILETPPDLRM*PYLETR
Trigger: CCGTGTTTCCAAATAAGGTCACATTCTGAGGTCTGG...AGGGGTTTCCAGTATTCTGTCTAGATTCATAAAGGTCAAAGGCCTTGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp CTCCACTCCGGGGCCTGTGCCGCCAGAACCGGGCTCTaGCCCCATACGCTGCCCTCGCAGCCTGGCGGCCTC +
Preference number: 3 (lower is better)
Translates to: LHSGACAARTGL*PHTLPSQPGGL
Trigger: GAGGCCGCCAGGCTGCGAGGGCAGCGTATGGGGGCAGAGCCCGGTTCTGGCGGCACAGGCCCCGGAGTGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp AGCGTCGGCAAGGAGCCTGCCCCCATGTGGGTCCGCTaGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SVGKEPAPMWVR*CLCRSVPRRKP
Trigger: GGGCTTCCGCCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp ACCGGCTGGAGCGTCGGCAAGGAGCCTGCCCCCATGTaGGTCCGCTGGTGCTTGTGCAGGTCGGTGCCCCGG +
Preference number: 3 (lower is better)
Translates to: TGWSVGKEPAPM*VRWCLCRSVPR
Trigger: CCGGGGCACCGACCTGCACAAGCACCAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp CAGGCTTTGGCACCGGGGCCTCCAGGAGCCACCGGCTaGAGCGTCGGCAAGGAGCCTGCCCCCATGTGGGTC +
Preference number: 3 (lower is better)
Translates to: QALAPGPPGATG*SVGKEPAPMWV
Trigger: GACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCCAAAGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR TCA 72 bp CAGGCCGAAAGGAAGGGCGAGGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: QAERKGEADAIS*CRGAGGPLSGH
Trigger: GTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGCCTCGCCCTTCCTTTCGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR TCA 72 bp GCTGTATGCCAGCAGCCACTGGATGCTGGAGGCAGCTaGTGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: AVCQQPLDAGGS*WTLPGPSGASP
Trigger: GGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR CCA 72 bp CGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTGGTaGGGGGCCGCCTCTTGGCTGATCAGGCCTGACCAA +
Preference number: 3 (lower is better)
Translates to: RLVSPMGSPSSW*GAASWLIRPDQ
Trigger: TTGGTCAGGCCTGATCAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp CCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTaGCACCGGGGCCTCCAGGAGCCACCGGCTGGAGCG +
Preference number: 3 (lower is better)
Translates to: PGKGVSGLVIRL*HRGLQEPPAGA
Trigger: CGCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR-3UTR CAA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCGGGCAGGTGTACGGCTaGTCAGCCCCATGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: ASSAAWASQMSPAGLILGGQVYG*SAPWEA
Trigger: GGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCC...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp TGGGACGTGGGGATGAGGCTGTATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: WDVGMRLYASSH*MLEAADGPSQA
Trigger: GGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATACAGCCTCATCCCCACGTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR GCA 72 bp AGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCATGGGAGGAAACGGGC +
Preference number: 3 (lower is better)
Translates to: SFLCGLGIPNVP*WPHTGPWEETG
Trigger: GCCCGTTTCCTCCCATGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR GCA 72 bp GGCTGCGCTGGGGAGATGGGTGTCAGCAACGCTGGGTaGTTTGCTAGCTCCTGGAGTGTGGCCTGGCCACAT +
Preference number: 3 (lower is better)
Translates to: GCAGEMGVSNAG*FASSWSVAWPH
Trigger: ATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGACACCCATCTCCCCAGCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp AGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTaGGGTACAGCAGGGCTCCCTGCAGCAGACGAGGGG +
Preference number: 3 (lower is better)
Translates to: RMKKLETTSWEG*GTAGLPAADEG
Trigger: CCCCTCGTCTGCTGCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 72 bp CCCGCCCCAGGTGTCTTCCGCCCTGCAGAGCAGCTATaGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: PAPGVFRPAEQL*ICKGDWNAAEP
Trigger: GGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTGGGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 72 bp TGCCCCGTGGGAAGAGCAGAGAAATCATCACCACCTTaGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGT +
Preference number: 3 (lower is better)
Translates to: CPVGRAEKSSPP*APRCHGLRQHS
Trigger: ACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp AGACCCGGCCCCTCCACAGGACAAGCCTGGTCTTCCTaGGTCCTGTTCCTTTGCCAGCACCGTCTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: RPGPSTGQAWSS*VLFLCQHRLAA
Trigger: GGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTGTCCTGTGGAGGGGCCGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 72 bp TCCCAGGCCCTTCAGGAGCCAGCCCCACGAACACCTTaGGTGTCGGCTTCTGGCCTCCTGAGTGTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: SQALQEPAPRTP*VSASGLLSVSL
Trigger: CAGAGACACACTCAGGAGGCCAGAAGCCGACACTCAAGGTGTTCGTGGGGCTGGCTCCTGAAGGGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR TCA 72 bp ATCCCAGGTCCTTCATTCTCCAGCGGCGCGTCCCGCTaGGCTGGGTCCATGCATCTTGGCTCCTCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: IPGPSFSSGASR*AGSMHLGSSPE
Trigger: TTCTGGGGAGGAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATGAAGGACCTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR GCA 72 bp ACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTaGACAGACCAGTGGCTCCCACGCAGCACAGGCCAG +
Preference number: 3 (lower is better)
Translates to: TLLVLATHPPWM*TDQWLPRSTGQ
Trigger: CTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 72 bp CTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCAACTGGATCCCAGGTC +
Preference number: 3 (lower is better)
Translates to: LGTTPFSTGHPP*HHRRPPTGSQV
Trigger: GACCTGGGATCCAGTTGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp GGAGCCAGCCCCACGAACACCTTGAGTGTCGGCTTCTaGCCTCCTGAGTGTGTCTCTGTGGCTGAAGCCCCT +
Preference number: 3 (lower is better)
Translates to: GASPTNTLSVGF*PPECVSVAEAP
Trigger: AGGGGCTTCAGCCACAGAGACACACTCAGGAGGCCAGAAGCCGACACTCAAGGTGTTCGTGGGGCTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR CCA 72 bp ACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTaGGACGTGGGGATGAGGCTGTATGCCAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: TAHRVTDTQERG*DVGMRLYASSH
Trigger: GTGGCTGCTGGCATACAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 72 bp TCACAGACACACAGGAGAGGGGTTGGGACGTGGGGATaGGGCTGTATGCCAGCAGCCACTGGATGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: SQTHRRGVGTWG*GCMPAATGCWR
Trigger: CCTCCAGCATCCAGTGGCTGCTGGCATACAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGTGTCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTaGTTTCCCGCCCCAGGTGTCTTCCGCCCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SQATCQEDGTQG*FPAPGVFRPAE
Trigger: CTCTGCAGGGCGGAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 72 bp GAGGTAGGAAGTCAGACCTGCGTCCAAAGCTGGCTCTaGCACCTGGGCAAGGTTTTCACGCTCCCAGTGCCC +
Preference number: 3 (lower is better)
Translates to: EVGSQTCVQSWL*HLGKVFTLPVP
Trigger: GGGCACTGGGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGACGCAGGTCTGACTTCCTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp CATTCTCCAGCGGCGCGTCCCGCTGAGCTGGGTCCATaGATCTTGGCTCCTCCCCAGAAAGGTATACAGCCA +
Preference number: 3 (lower is better)
Translates to: HSPAARPAELGP*ILAPPQKGIQP
Trigger: TGGCTGTATACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR CCA 72 bp CCAGGCAAAAGACAGGCCCTGCTTGGCCGTGGTCACTaGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: PGKRQALLGRGH*PPRSGLQMSAL
Trigger: GAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp AGGTCCTTCATTCTCCAGCGGCGCGTCCCGCTGAGCTaGGTCCATGCATCTTGGCTCCTCCCCAGAAAGGTA +
Preference number: 3 (lower is better)
Translates to: RSFILQRRVPLS*VHASWLLPRKV
Trigger: TACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCTGGAGAATGAAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR GCA 72 bp GGCTCTGCCACCTGGGCAAGGTTTTCACGCTCCCAGTaGCCAGTTCCTCCACCCACAGAAGGAGAATCATGG +
Preference number: 3 (lower is better)
Translates to: GSATWARFSRSQ*PVPPPTEGESW
Trigger: CCATGATTCTCCTTCTGTGGGTGGAGGAACTGGGCACTGGGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp TCTCATCAAGCCTTGTACCAGGCAAAAGACAGGCCCTaGTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGC +
Preference number: 3 (lower is better)
Translates to: SHQALYQAKDRP*LAVVTGRQDQG
Trigger: GCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGCCTGGTACAAGGCTTGATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp ACAGGACAAGCCTGGTCTTCCTGGGTCCTGTTCCTTTaGCAGCACCGTCTTGCAGCCCCGTCTTCACGGGAT +
Preference number: 3 (lower is better)
Translates to: TGQAWSSWVLFL*QHRLAAPSSRD
Trigger: ATCCCGTGAAGACGGGGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp CAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATaGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: QARHIPGNMSGR*NSGVLSRPRCL
Trigger: AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 72 bp AACGCTGGGTGCTTTGCTAGCTCCTGGAGTGTGGCCTaGCCACATCTAGCTGGGTACCTCATGCCCCATGAG +
Preference number: 3 (lower is better)
Translates to: NAGCFASSWSVA*PHLAGYLMPHE
Trigger: CTCATGGGGCATGAGGTACCCAGCTAGATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp ATGGGTGTCAGCAACGCTGGGTGCTTTGCTAGCTCCTaGAGTGTGGCCTGGCCACATCTAGCTGGGTACCTC +
Preference number: 3 (lower is better)
Translates to: MGVSNAGCFASS*SVAWPHLAGYL
Trigger: GAGGTACCCAGCTAGATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGACACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp GAAGTCAGACCTGCGTCCAAAGCTGGCTCTGCCACCTaGGCAAGGTTTTCACGCTCCCAGTGCCCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: EVRPASKAGSAT*ARFSRSQCPVP
Trigger: AGGAACTGGGCACTGGGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGACGCAGGTCTGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR-3UTR CAA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACTGGTGCGTGCTGAAGTaGGAGCGGTCGCTAAAGCCC +
Preference number: 3 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHWCVLK*ERSLKP
Trigger: GGGCTTTAGCGACCGCTCCAACTTCAGCACGCACCA...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589422.1
3UTR TCA 72 bp TCCCAGGCTGGGATGAAGGCCAAGGCCACCTACCTATaGGGAACAACCACTGCCTGGCTGGAACGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: SQAGMKAKATYL*GTTTAWLERSR
Trigger: TCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCTTGGCCTTCATCCCAGCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 72 bp TCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTaGATGTGCACAGACCAGTGGCTCCCACGCAGCACA +
Preference number: 3 (lower is better)
Translates to: SITLLVLATHPP*MCTDQWLPRST
Trigger: TGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CCA 72 bp ACCTTGTCTCCAGGATGTGTCCTGCTGTCTGCCCCGTaGGAAGAGCAGAGAAATCATCACCACCTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: TLSPGCVLLSAP*EEQRNHHHLGP
Trigger: GGGCCCAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAGGACACATCCTGGAGACAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp TGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATaGTGCAGAGCCCCGGGCTCCATTTGGAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: CRAAMDLQRGLE*CRAPGSIWKLW
Trigger: CCAGAGTTTCCAAATGGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 72 bp TGGGACTCACAGCTCCTACAAAACTCTCCCATCACGTaGGTGCTGAGGATGACGCCCATGAGATGGGGCCAA +
Preference number: 3 (lower is better)
Translates to: WDSQLLQNSPIT*VLRMTPMRWGQ
Trigger: TTGGCCCCATCTCATGGGCGTCATCCTCAGCACTCACGTGATGGGAGAGTTTTGTAGGAGCTGTGAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp CATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATaGTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAAT +
Preference number: 3 (lower is better)
Translates to: HTGPWEETGSWQ*FRTRLSSSFLN
Trigger: ATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
3UTR CCA 72 bp AGGCCACCTACCTATGAGGAACAACCACTGCCTGGCTaGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGC +
Preference number: 3 (lower is better)
Translates to: RPPTYEEQPLPG*NVPEPSGFHSC
Trigger: GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 72 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTaGCCTACGACTTCCGAGATGACTAAACCCACCAAG +
Preference number: 3 (lower is better)
Translates to: GWNVPEPSGFHS*PTTSEMTKPTK
Trigger: CTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR GCA 72 bp TGTTTGTCTCCCCAACCTTGTCTCCAGGATGTGTCCTaGTGTCTGCCCCGTGGGAAGAGCAGAGAAATCATC +
Preference number: 3 (lower is better)
Translates to: CLSPQPCLQDVS*CLPRGKSREII
Trigger: GATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAGGACACATCCTGGAGACAAGGTTGGGGAGACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CCA 72 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTaGCCACTCACCCACCGTGGATGTGCACAGACCAGT +
Preference number: 3 (lower is better)
Translates to: LNPPRTLSHCLS*PLTHRGCAQTS
Trigger: ACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 72 bp CTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTaGAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: LPRSTGQTKAGR*RLLTLERQSGA
Trigger: TGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 72 bp TTCACGGGATGCTTTTGTAACTGCTGTGATCAGCCCTaGCCTGGGCACCTGTTTGTCTCCCCAACCTTGTCT +
Preference number: 3 (lower is better)
Translates to: FTGCFCNCCDQP*PGHLFVSPTLS
Trigger: AGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTCAGGGCTGATCACAGCAGTTACAAAAGCATCCCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 72 bp CCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATaGCTAAACCCACCAAGGACTCTATCACACTGCTTG +
Preference number: 3 (lower is better)
Translates to: PVVSIAALRLPR*LNPPRTLSHCL
Trigger: CAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 72 bp AACTCTGAATTACTGTGTCTGTCAAGGCAAGGGGAGTaGGGTAGGAAGTCAGACCTGCGTCCAAAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: NSELLCLSRQGE*GRKSDLRPKLA
Trigger: AGCCAGCTTTGGACGCAGGTCTGACTTCCTACCTCACTCCCCTTGCCTTGACAGACACAGTAATTCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR GCA 72 bp GAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTaGCAAAAGGTCAAATGTGCACGTATATACAGTGAC +
Preference number: 3 (lower is better)
Translates to: EKGQVTHLEPGL*QKVKCARIYSD
Trigger: GTCACTGTATATACGTGCACATTTGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR TCA 72 bp GCTGTGCCAAAAGGTCAAATGTGCACGTATATACAGTaGCTAGGTGACAAATGCAATGGAGCATCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: AVPKGQMCTYIQ*LGDKCNGASQA
Trigger: AGCCTGGGATGCTCCATTGCATTTGTCACCTAGTCACTGTATATACGTGCACATTTGACCTTTTGGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR-3UTR CAA 90 bp AGATTCTCAAGGCCTTTGACCTTTATGAATCTAGACAGAATACTGGAAACCCCTCAGCGGCCTCACTTGTaGATCACCAGCAAAAACTGG +
Preference number: 3 (lower is better)
Translates to: RFSRPLTFMNLDRILETPQRPHL*ITSKNW
Trigger: CCAGTTTTTGCTGGTGATCAACAAGTGAGGCCGCTG...AGGGGTTTCCAGTATTCTGTCTAGATTCATAAAGGTCAAAGGCCTTGAGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR TCA 72 bp AAAAGGTCAAATGTGCACGTATATACAGTGACTAGGTaGCAAATGCAATGGAGCATCCCAGGCTGGGATGAA +
Preference number: 3 (lower is better)
Translates to: KRSNVHVYTVTR*QMQWSIPGWDE
Trigger: TTCATCCCAGCCTGGGATGCTCCATTGCATTTGTCACCTAGTCACTGTATATACGTGCACATTTGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCCCGGCCACAGGCCGGGCAGGGGCTGGCCTCTGACCTaGGAGCGGGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GACAGRCPGGSPGHRPGRGWPLT*ERVARP
Trigger: GGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCC...CCTGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCCCGGCCACAGGCCGGGCAGGGGGTGGCCAGGCCCCTaGCATCGTGCCGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: GACAGRCPGGSPGHRPGRGWPGP*HRAEST
Trigger: AGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCC...CCTGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp GGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCCCGGCCACAGGCCGGGCAGGAGCGGCGCGTCCCGCTaGGCTGGGTCCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: GACAGRCPGGSPGHRPGRSGASR*AGSMHL
Trigger: AAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCT...CCTGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCTCACCGCTCTCCGGCTaGTGCTCGCGTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGSPLSG*CSRTRA
Trigger: GGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGA...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCGCCCCTGACTGGGGCTaGCCTCTGACCTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRAPDWG*PLTWER
Trigger: CCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGC...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp CTCCAGGAGCCACCGGCTGGAGCGTCGGCAAGGAGCCTGCCCCCATGTGGGTCCGTGTCCTGCGGTGGATaGCCAGGCTGGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LQEPPAGASARSLPPCGSVSCGG*PGWSSG
Trigger: GCCAGAGCTCCAGCCTGGTCATCCACCGCAGGACAC...GGACCCACATGGGGGCAGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GGTGCTTGTGCAGGTCGGTGCCCCGGCGGAAGCCCCGGCCACAGGCCGGGCAGGCCAAATGTCCCCTGCTaGCCTCATACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GACAGRCPGGSPGHRPGRPNVPC*PHTGPW
Trigger: CCATGGCCCAGTATGAGGCCAGCAGGGGACATTTGG...CCTGCCCGGCCTGTGGCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp AGCGGGTGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTGTCCGCTGGTGCTTGTaGAGGTCGGTGCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SGWPGPWHRAESTRYHSIVRWCL*RSVPRR
Trigger: CCGCCGGGGCACCGACCTGCACAAGCACCAGCGGAC...AATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTCCACTCCGGGGCCTGTaGCGCCAGAACCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPPLRGL*RQNRAL
Trigger: CAGAGCCCGGTTCTGGCGGCACAGGCCCCGGAGTGG...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCAAGCGCTGCCGGCCGTaGGCAGTTCGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCKRCRP*AVRGRT
Trigger: GGTCCTGCCCCGAACTGCCCACGGCCGGCAGCGCTT...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CGGGGCAGGTGTACGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTGGTGGGGGAGCCTGCCCCCATGTaGGTCCGCTGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RGRCTACQPHGKPVFLVGEPAPM*VRWCLC
Trigger: GCACAAGCACCAGCGGACCCACATGGGGGCAGGCTC...CCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCCTCATACTGGGCCATaGGAGGAAACGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGPHTGP*EETGSW
Trigger: CCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGG...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp GGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCTGTGAGTTTCAGGCCTGGTaGTCAGGCTTTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: GELEGLSLATTAGPSVACEFQAW*SGFGTG
Trigger: CCCGGTGCCAAAGCCTGATCACCAGGCCTGAAACTC...ACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp TGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGGCCGCTCTCCGGCTGCTaGTCGCGTACCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WGLLAGESSLFLQGQILWPLSGC*SRTRAW
Trigger: CCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGG...CCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCTTCCTGGGCTTCCGCTaGAGCCCTTCCACAAGGACC +
Preference number: 4 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRFLGFR*SPSTRT
Trigger: GGTCCTTGTGGAAGGGCTGCAGCGGAAGCCCAGGAA...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCCACGAACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MLEAADGPSQALQEPAPRTGHPP*HHRRPP
Trigger: TGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGT...TCGTGGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp GGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCTGTGTGTGCACCCTCTGGTaGGTGCTGAAGTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GELEGLSLATTAGPSVACVCTLW*VLKLER
Trigger: CCGCTCCAACTTCAGCACGCACCAGAGGGTGCACAC...ACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCAAGAGCCGGAAGAGCTaGCGGAAAGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGKSRKS*RKVSGL
Trigger: CAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTT...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp AGCGGGTGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTTGGAGGGCCTCTCTCTaGCCACAACAGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SGWPGPWHRAESTRYHSIWRASL*PQQRAP
Trigger: AGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCA...AATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCTGATGCCGGGGAGCTaGAGGGCCTCTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQLMPGS*RASLWP
Trigger: TGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAG...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp CAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTGGCTGGCCTCTGACCTaGGAGCGGGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QDEEAGDHVLGRLGYSRAGWPLT*ERVARP
Trigger: GGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCC...AGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCGTGTGCGTCCGGCGGTaGGCGCTGAAGTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCVCVRR*ALKCEL
Trigger: CAGCTCGCACTTCAGCGCCCACCGCCGGACGCACAC...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGGAGCCTGCCCCCATGTaGGTCCGCTGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQEPAPM*VRWCLC
Trigger: GCACAAGCACCAGCGGACCCACATGGGGGCAGGCTC...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR TCA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCGACAGATCCTCTGGCTaGGCCTCTGCCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGDRSSG*ASAWCF
Trigger: AAAACACCAGGCAGAGGCTCAGCCAGAGGATCTGTC...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp GCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APGIVPRALGTTPFSTGHADAIS*CRGAGG
Trigger: CCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGC...ATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCGGGCCGCCTCTTGGCTaGTCAGGCCTGACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRGPPLG*SGLTKP
Trigger: GGGCTTGGTCAGGCCTGATCAGCCAAGAGGCGGCCC...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp TGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACGGGCCGCCTCTTGGCTaGTCAGGCCTGACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: WPGPWHRAESTRYHSILNGPPLG*SGLTKP
Trigger: GGGCTTGGTCAGGCCTGATCAGCCAAGAGGCGGCCC...GTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp GAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGATGCTGGAGGCAGCTaGTGGACCCTCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGHIPDTKGPGANAALGPDAGGS*WTLPGP
Trigger: AGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATC...GGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCCATCTGCTTGCCCCCTaGCAAGACCCGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCHLLAP*QDPAPP
Trigger: TGGAGGGGCCGGGTCTTGGCAGGGGGCAAGCAGATG...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTCGCGTCCCGCTGAGCTaGGTCCATGCATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPRVPLS*VHASWL
Trigger: GAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCG...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACAGCCCGTCTTCCTGGTaGGGGGCCGCCTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WPGPWHRAESTRYHSILNSPSSW*GAASWL
Trigger: CAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCT...GTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGGTGTGCGTCCGGCGGTaGGCGCTGAAGTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGAAGWRIEPLPPGTDPLVCVRR*ALKCEL
Trigger: CAGCTCGCACTTCAGCGCCCACCGCCGGACGCACAC...CAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGCCAGGAGCCACCGGCTaGAGCGTCGGCAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGAAGWRIEPLPPGTDPLPGATG*SVGKEP
Trigger: AGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGG...CAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCTGTGTCACCTGTTCTaGCTGCCACTGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGLCHLF*LPLDTQ
Trigger: CTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAG...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGGGGCTCAGGCTGCGCTaGGGAGATGGGTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQGLRLR*GDGCQQ
Trigger: TTGCTGACACCCATCTCCCCAGCGCAGCCTGAGCCC...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGCTGCCCTCGCAGCCTaGCGGCCTCCGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGAALAA*RPPLWL
Trigger: CAGCCACAGCGGAGGCCGCCAGGCTGCGAGGGCAGC...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 72 bp CTGCCCCGTGGGAAGAGCAGAGAAATCATCACCACCTaGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: LPRGKSREIITT*GPTVPRAQAAQ
Trigger: CTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATGATTTCTCTGCTCTTCCCACGGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 72 bp TCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTaGGCACCGGGGCCTCCAGGAGCCACCGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SWKGSFRPGDQA*APGPPGATGWS
Trigger: GCTCCAGCCGGTGGCTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTGAGTTTCAGGCCTGGTaGTCAGGCTTTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPEFQAW*SGFGTG
Trigger: CCCGGTGCCAAAGCCTGATCACCAGGCCTGAAACTC...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCATCACCGCTCTCCGGCTaGTGCTCGCGTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: TRQPHSADTGQSTQGPEASPLSG*CSRTRA
Trigger: GGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGA...TGCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGGCTTGTGCAGGTCGGTaGCCCGGCGGAAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LAGTFQNPVVSIAALRLPACAGR*PGGSPG
Trigger: GCCGGGGCTTCCGCCGGGGCACCGACCTGCACAAGC...CGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTGTCCGCTGGTGCTTGTaGAGGTCGGTGCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAVRWCL*RSVPRR
Trigger: CCGCCGGGGCACCGACCTGCACAAGCACCAGCGGAC...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGTGCAAACCAGGCCGTaGGGGTGGGCCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRVQTRP*GWARRR
Trigger: CCGCCTGCGGGCCCACCCGCACGGCCTGGTTTGCAC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545009.1
CDS-3UTR CCA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCGGCCATTGCTTCCGGTaGGCCTTGTTCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRGHCFR*ALFLFR
Trigger: CCTGAAAAGGAACAAGGCCCACCGGAAGCAATGGCC...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTTCGCGTACCCGAGCCTaGATCTCCCCCGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTSRTRA*ISPGST
Trigger: TGTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGA...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp TGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACTCGCGTACCCGAGCCTaGATCTCCCCCGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: WPGPWHRAESTRYHSILNSRTRA*ISPGST
Trigger: TGTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGA...GTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTCTGGGGGCTGCTGGCTaGAGAATCGAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPLGAAG*RIEPLP
Trigger: AGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGGACCAAGCCCCTGACTaGGGCTGGCCTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LGAAGWRIEPLPPGTDPLDQAPD*GWPLTW
Trigger: CCAGGTCAGAGGCCAGCCCCAGTCAGGGGCTTGGTC...CAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGAGCCCGTCTTCCTGGTaGGGGGCCGCCTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLSPSSW*GAASWL
Trigger: CAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCT...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGGGCTTGTCAGCCCCATaGGAAGCCCGTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQGLSAP*EARLPG
Trigger: ACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCC...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCGTGTGTGTGCGCTaGTGCTTGGTCAAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQPVCVR*CLVKWD
Trigger: GTCCCACTTGACCAAGCACCAGCGCACACACACGGG...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCGTGTGCGTCCGGCGGTaGGCGCTGAAGTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTVCVRR*ALKCEL
Trigger: CAGCTCGCACTTCAGCGCCCACCGCCGGACGCACAC...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCCCCATGTGGGTCCGCTaGTGCTTGTGCAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCPMWVR*CLCRSV
Trigger: CACCGACCTGCACAAGCACCAGCGGACCCACATGGG...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCCACGACCTCATACTGGGCCATaGGAGGAAACGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MLEAADGPSQALQEPAPRPHTGP*EETGSW
Trigger: CCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGG...TCGTGGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCTGTCTGAGTGTGTCTCTGTaGCTGAAGCCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GELEGLSLATTAGPSVACLSVSL*LKPLLC
Trigger: ACAGAGCAGGGGCTTCAGCCACAGAGACACACTCAG...ACAGGCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp ATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCCACGAACACAGGAGAGGGGTTaGGACGTGGGGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MLEAADGPSQALQEPAPRTQERG*DVGMRL
Trigger: CAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGT...TCGTGGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCAGGGCGCCGGGCCTTTaGGACAGTGTCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRRAPGL*DSVPAS
Trigger: GGAAGCTGGGACACTGTCCCAAAGGCCCGGCGCCCT...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCCACGAAAATCATCACCACCTTaGGCCCCACGGTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: MLEAADGPSQALQEPAPRKSSPP*APRCHG
Trigger: CCCGTGGCACCGTGGGGCCCAAGGTGGTGATGATTT...TCGTGGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCCGCTCTCCGGCTGCTaGTCGCGTACCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMPLSGC*SRTRAW
Trigger: CCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGG...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GCCACTGGATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGACGGGCAGCTGGCAATaGTTTCGGACCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ATGCWRQLMDPPRPFRSQTGSWQ*FRTRLS
Trigger: AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGT...CTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATCCAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTGGCCTCCGCTGTGGCTaGCTAGCTGTCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPGLRCG*LAVKSK
Trigger: TTTGCTCTTGACAGCTAGGCAGCCACAGCGGAGGCC...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TGGCTGAAGCCCCTGCTCTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGATGCGGGCCTCAGGCTTaGCAGCCAGGGACGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WLKPLLCVTCSGCHWTLRCGPQA*QPGTPE
Trigger: CTCTGGCGTCCCTGGCTGCCAAGCCTGAGGCCCGCA...TCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAGAGCAGGGGCTTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTTGCGGGCCTCAGGCTTaGCAGCCAGGGACGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGCGPQA*QPGTPE
Trigger: CTCTGGCGTCCCTGGCTGCCAAGCCTGAGGCCCGCA...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCGGAGGCCAGGGACAGTaGCCATTGCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTGGQGQ*PLLPVG
Trigger: GCCCACCGGAAGCAATGGCCACTGTCCCTGGCCTCC...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCGGAAAGTCTCAGGGCTaGGGTCCTCCGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRGKSQG*GPPSPR
Trigger: CCGTGGAGACGGAGGACCCCAGCCCTGAGACTTTCC...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGCTGATGCCGGGGAGCTaGAGGGCCTCTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VHRPVAPTQHRPDKSWKVLMPGS*RASLWP
Trigger: TGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAG...CACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGCGGGTGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCCGCCGTCCTCCAACTaGATCCCAGGTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SGWPGPWHRAESTRYHSIPPSSN*IPGPSF
Trigger: GAATGAAGGACCTGGGATCCAGTTGGAGGACGGCGG...AATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACGCCCCTGACTGGGGCTaGCCTCTGACCTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LGRCQARHIPGNMSGRWNAPDWG*PLTWER
Trigger: CCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGC...GTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTGACCAAGCCCCTGACTaGGGCTGGCCTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: QDEEAGDHVLGRLGYSRADQAPD*GWPLTW
Trigger: CCAGGTCAGAGGCCAGCCCCAGTCAGGGGCTTGGTC...AGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCGACCAAGCCCCTGACTaGGGCTGGCCTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RPAEQLWICKGDWNAAEPDQAPD*GWPLTW
Trigger: CCAGGTCAGAGGCCAGCCCCAGTCAGGGGCTTGGTC...GGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCCCCGTGTGTGTGCGCTaGTGCTTGGTCAAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCPVCVR*CLVKWD
Trigger: GTCCCACTTGACCAAGCACCAGCGCACACACACGGG...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCTGGAGCATCCCAGGCTaGGATGAAGGCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCWSIPG*DEGQGH
Trigger: GTGGCCTTGGCCTTCATCCCAGCCTGGGATGCTCCA...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCGGCCCTGCTTGGCCGTaGTCACTGGCCGCCAAGATC +
Preference number: 4 (lower is better)
Translates to: NQAAPFCRHRTEHTGARSGPAWP*SLAAKI
Trigger: GATCTTGGCGGCCAGTGACCACGGCCAAGCAGGGCC...GCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCGATGCTGGAGGCAGCTaGTGGACCCTCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSDAGGS*WTLPGP
Trigger: AGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCATC...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR TCA 90 bp GGCCCCGGCCCTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGGGGATTATAGCACTGTaGGCTGCCAGCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GPGPGEMSGPSHPRQHVRGIIAL*AASLAF
Trigger: AAAAGCCAGGCTGGCAGCTCACAGTGCTATAATCCC...CCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAGGGCCGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGACCGCTCTCCGGCTGCTaGTCGCGTACCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGTFQNPVVSIAALRLPRPLSGC*SRTRAW
Trigger: CCAGGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGG...TCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGTCACCGCTCTCCGGCTaGTGCTCGCGTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LAGTFQNPVVSIAALRLPSPLSG*CSRTRA
Trigger: GGCTCGGGTACGCGAGCAGCAGCCGGAGAGCGGTGA...CGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTAGCTGGGCTGGGGGCTaGTGGCTGGAGAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKASWAGG*WLENRA
Trigger: GGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCAGCT...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp ATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MCTDQWLPRSTGQTKAGRTGHPP*HHRRPP
Trigger: TGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGT...CCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGAGGCCCCTGGCATCGTaGCGAGAGCACTCGGTACCA +
Preference number: 4 (lower is better)
Translates to: LQSSYGSAKGTGMLQSPGRPLAS*REHSVP
Trigger: TGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCT...CCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCAGCACAGTGTGCACCCTCTGGTaGGTGCTGAAGTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LATHPPWMCTDQWLPRSTVCTLW*VLKLER
Trigger: CCGCTCCAACTTCAGCACGCACCAGAGGGTGCACAC...TGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCGTGTGCACCCTCTGGTaGGTGCTGAAGTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWAVCTLW*VLKLER
Trigger: CCGCTCCAACTTCAGCACGCACCAGAGGGTGCACAC...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGCGTCGGCAAGGAGCCTaGCCCCATGTGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSERRQGA*PHVGPL
Trigger: CAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACG...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CTGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGCCAGCAGCCACTGGATaGTGGAGGCAGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: LGAAGWRIEPLPPGTDPLPAATG*WRQLMD
Trigger: GTCCATCAGCTGCCTCCAGCATCCAGTGGCTGCTGG...CAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp TTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCAGCACAGATGGAACTCAGGGGTaGTTTCCCGCCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LATHPPWMCTDQWLPRSTDGTQG*FPAPGV
Trigger: GACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATC...TGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp ATGCTGGAGGCAGCTGATGGACCCTCCCAGGCCCTTCAGGAGCCAGCCCCACGAGCCAAGATCGTGCCTTaGACTCCAGCCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: MLEAADGPSQALQEPAPRAKIVP*TPAWVM
Trigger: CATTACCCAGGCTGGAGTGCAAGGCACGATCTTGGC...TCGTGGGGCTGGCTCCTGAAGGGCCTGGGAGGGTCCATCAGCTGCCTCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGGCCAGAACCGGGCTCTaGCCCCATACGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMARTGL*PHTLPS
Trigger: CGAGGGCAGCGTATGGGGGCAGAGCCCGGTTCTGGC...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTGGAGGCCAGGGACAGTaGCCATTGCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAGGQGQ*PLLPVG
Trigger: GCCCACCGGAAGCAATGGCCACTGTCCCTGGCCTCC...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCTGGGCTGGGGGCTGCTaGCTGGAGAATCGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLWAGGC*LENRAS
Trigger: AGAGGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCA...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTTGGGCTGGGGGCTGCTaGCTGGAGAATCGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSWAGGC*LENRAS
Trigger: AGAGGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCA...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTTGGAGGGCCTCTCTCTaGCCACAACAGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGWRASL*PQQRAP
Trigger: AGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCA...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCAAGTTCACGGGCACCTaGGACCAGGCCGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGHIPDTKGPGANAALGPKFTGT*DQAERK
Trigger: CTTCCTTTCGGCCTGGTCCCAGGTGCCCGTGAACTT...GGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCAGGCTGGCCTCTGACCTaGGAGCGGGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSGWPLT*ERVARP
Trigger: GGGCCTGGCCACCCGCTCCCAGGTCAGAGGCCAGCC...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACGCCCCTGACTGGGGCTaGCCTCTGACCTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHAPDWG*PLTWER
Trigger: CCGCTCCCAGGTCAGAGGCCAGCCCCAGTCAGGGGC...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCCTGTGTGTCCTGCGGTaGATGACCAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRLCVLR*MTRLEL
Trigger: GAGCTCCAGCCTGGTCATCCACCGCAGGACACACAG...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTCCCATGTGGGTCCGCTaGTGCTTGTGCAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSPMWVR*CLCRSV
Trigger: CACCGACCTGCACAAGCACCAGCGGACCCACATGGG...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCCAGGAGCCACCGGCTaGAGCGTCGGCAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLPGATG*SVGKEP
Trigger: AGGCTCCTTGCCGACGCTCCAGCCGGTGGCTCCTGG...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCCTGGTGATCAGGCTTTaGCACCGGGGCCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTLVIRL*HRGLQE
Trigger: CTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAG...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp CTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGACGTCCTGGGAAGGCTaGGGTACAGCAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LQSSYGSAKGTGMLQSPGTSWEG*GTAGLP
Trigger: AGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGT...CCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACGAGCAAACGCAGCCCTaGGCCCCGGCCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDEQTQP*APALGR
Trigger: TCTCCCCAGGGCCGGGGCCCAGGGCTGCGTTTGCTC...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GTGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCACAGAAGGAGAATCATaGCCGGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VEGHIPDTKGPGANAALGTEGES*PGAVAH
Trigger: GTGAGCCACCGCGCCCGGCCATGATTCTCCTTCTGT...GCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTTGGCGGCCTCCGCTGTaGCTGCCTAGCTGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSWRPPL*LPSCQE
Trigger: CTCTTGACAGCTAGGCAGCCACAGCGGAGGCCGCCA...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTAAGACAGGCCCTGCTTaGCCGTGGTCACTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGKTGPA*PWSLAA
Trigger: GGCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTT...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGCCCCGGCCCTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGCGGTGTTGCCCAGGTTaGTCTGGAACTCCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GPGPGEMSGPSHPRQHVRRCCPG*SGTPLN
Trigger: ATTGAGAGGAGTTCCAGACCAACCTGGGCAACACCG...CCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAGGGCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 72 bp CTCCCAGGCCCTTCAGGAGCCAGCCCCACGAACACCTaGAGTGTCGGCTTCTGGCCTCCTGAGTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPGPSGASPTNT*SVGFWPPECVS
Trigger: AGAGACACACTCAGGAGGCCAGAAGCCGACACTCAAGGTGTTCGTGGGGCTGGCTCCTGAAGGGCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR TCA 90 bp GAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGACAGATCCTCTGGCTaGGCCTCTGCCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: EGHIPDTKGPGANAALGPDRSSG*ASAWCF
Trigger: AAAACACCAGGCAGAGGCTCAGCCAGAGGATCTGTC...GGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCADAIS*CRGAGG
Trigger: CCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGC...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GGCCACCTACCTATGAGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAAGCGGCGCGTCCCGCTaGGCTGGGTCCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: GHLPMRNNHCLAGTFQNPSGASR*AGSMHL
Trigger: AAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCT...TGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGTGTCCTGCGGTGGATaGCCAGGCTGGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RAPFGNSGRMKKLETTSWVSCGG*PGWSSG
Trigger: GCCAGAGCTCCAGCCTGGTCATCCACCGCAGGACAC...CCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGTGTCCTGCGGTGGATaGCCAGGCTGGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRVSCGG*PGWSSG
Trigger: GCCAGAGCTCCAGCCTGGTCATCCACCGCAGGACAC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTAGTGCGAGCTGTTGTTaGAGCGCTTCCCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QDEEAGDHVLGRLGYSRASASCC*SASRTG
Trigger: CCCAGTGCGGGAAGCGCTTCAACAACAGCTCGCACT...AGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp ACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCAGGCAGGAGGAACACTTaGGCCCAGGGATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TRQPHSADTGQSTQGPEAGRRNT*AQGFEA
Trigger: AGCCTCGAATCCCTGGGCTCAAGTGTTCCTCCTGCC...TGCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGGCACAGGCCTGGATATaGGAGAGGGGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSALQSSYGSAKGTGMLAQAWI*ERGLGA
Trigger: AGCCCCCAGGCCCCTCTCTCATATCCAGGCCTGTGC...CAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp ATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGAGCAGGCAGCGACCATaGGATGGGGCCAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MCTDQWLPRSTGQTKAGRSRQRP*DGAKQQ
Trigger: CTGCTGCTTGGCCCCATCTCATGGTCGCTGCCTGCT...CCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTTCTCTGGACCCCACGTaGTCTGGCCACTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLSLDPT*SGHWGP
Trigger: GGGTCCCCAGTGGCCAGATCACGTGGGGTCCAGAGA...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGCCAGACCTCAGAATGTaGCCTGTGTGCGTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EPRAPFGNSGRMKKLETTPDLRM*PVCVRR
Trigger: CCGCCGGACGCACACAGGTCACATTCTGAGGTCTGG...CGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545009.1
CDS-3UTR GCA 90 bp ACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCATCCTGTTCCAGGTCCTaGTCCAAGGTTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRQPHSADTGQSTQGPEASCSRS*SKVGRG
Trigger: GCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGA...TGCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTTTCCTGGGCTTCCGCTaGAGCCCTTCCACAAGGACC +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSFLGFR*SPSTRT
Trigger: GGTCCTTGTGGAAGGGCTGCAGCGGAAGCCCAGGAA...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp GTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGAGCTGGGCTGGGGGCTaGTGGCTGGAGAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: VSSALQSSYGSAKGTGMLSWAGG*WLENRA
Trigger: GGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCAGCT...CAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGGGTGTGTGTGCGCTGGTaGTTGGTCAAGTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: WGLLAGESSLFLQGQILWVCVRW*LVKWDV
Trigger: GACGTCCCACTTGACCAAGCACCAGCGCACACACAC...CCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACCGTCGGCAAGGAGCCTaGCCCCATGTGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHRRQGA*PHVGPL
Trigger: CAGCGGACCCACATGGGGGCAGGCTCCTTGCCGACG...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp ACACAGAGACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTGGGACGTGGCACCCACCGTGGATGTaGACAGACCAGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TQRQRTGSQTHRRGVGTWHPPWM*TDQWLP
Trigger: TGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTG...CCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGTCTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp AACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCGGTGAGCCAAGATCGTaGCTTGCACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NQAAPFCRHRTEHTGARSGEPRS*LALQPG
Trigger: CCCAGGCTGGAGTGCAAGGCACGATCTTGGCTCACC...GCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGGGGTTCACCCCTGGCTaGCAGGCCACTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSEGFTPG*QATEDG
Trigger: CCCATCCTCAGTGGCCTGGCAGCCAGGGGTGAACCC...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ACACAGAGACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTGGGACGTGGTTGCCAGCACCGTCTTaGAGCCCCGTCTTCACGGGA +
Preference number: 4 (lower is better)
Translates to: TQRQRTGSQTHRRGVGTWLPAPS*SPVFTG
Trigger: TCCCGTGAAGACGGGGCTGCAAGACGGTGCTGGCAA...CCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGTCTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGCTGGGGACATCTGCTTaGCCCCTGCCAAGACCCGGC +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSELGTSA*PLPRPG
Trigger: GCCGGGTCTTGGCAGGGGGCAAGCAGATGTCCCCAG...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTGAGGATGGGCAGGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGAAGCGCTGCCGGCCGTaGGCAGTTCGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LRMGRGLFSSSLVPGKRQKRCRP*AVRGRT
Trigger: GGTCCTGCCCCGAACTGCCCACGGCCGGCAGCGCTT...CTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCCTGCCCATCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGGGAAAGTCTCAGGGCTaGGGTCCTCCGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: MCTDQWLPRSTGQTKAGRGKSQG*GPPSPR
Trigger: CCGTGGAGACGGAGGACCCCAGCCCTGAGACTTTCC...CCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGTCGCGTACCCGAGCCTaGATCTCCCCCGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LAGTFQNPVVSIAALRLPSRTRA*ISPGST
Trigger: TGTGCTGCCGGGGGAGATCCAGGCTCGGGTACGCGA...CGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGGAAGTTCACGGGCACCTaGGACCAGGCCGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WGLLAGESSLFLQGQILWKFTGT*DQAERK
Trigger: CTTCCTTTCGGCCTGGTCCCAGGTGCCCGTGAACTT...CCAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCCCGCCGTCCTCCAACTaGATCCCAGGTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRPPSSN*IPGPSF
Trigger: GAATGAAGGACCTGGGATCCAGTTGGAGGACGGCGG...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCGGGTGGCCAGGCCCCTaGCATCGTGCCGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCGWPGP*HRAEST
Trigger: AGTGCTCTCGGCACGATGCCAGGGGCCTGGCCACCC...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAAGCCCGTCTTCCTGGTaGGGGGCCGCCTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LYHTACLGHSPTVDVHRPSPSSW*GAASWL
Trigger: CAGCCAAGAGGCGGCCCCCCACCAGGAAGACGGGCT...TGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTGTGTGTCCTGCGGTaGATGACCAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQSSYGSAKGTGMLQSPGLCVLR*MTRLEL
Trigger: GAGCTCCAGCCTGGTCATCCACCGCAGGACACACAG...CCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TGGCTGAAGCCCCTGCTCTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGACTGGTGATCAGGCTTTaGCACCGGGGCCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WLKPLLCVTCSGCHWTLRLVIRL*HRGLQE
Trigger: CTCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAG...TCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAGAGCAGGGGCTTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGGCTTCCTCTGCGGCCTaGGCATCCCAAATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VHRPVAPTQHRPDKSWKVASSAA*ASQMSP
Trigger: AGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC...CACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCTGTTCTGGCTGCCACTaGACACTCAGAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASSAAWASQMSPAGLILGCSGCH*TLRACP
Trigger: AGGACAGGCTCTGAGTGTCCAGTGGCAGCCAGAACA...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTGCCATCACGCAGCCACTGGATGCTaGAGGCAGCTGATGGACCCT +
Preference number: 4 (lower is better)
Translates to: PRALGTTPFSTGHPPCHHAATGC*RQLMDP
Trigger: AGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGC...GTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGCTGGAGACCACGTCCTaGGAAGGCTGGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: VHRPVAPTQHRPDKSWKVLETTS*EGWGTA
Trigger: TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAG...CACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCATCTGCAAAGGGGACTaGAATGCTGCAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRICKGD*NAAEPR
Trigger: CCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGAT...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTGGCAGGTCACGCACCTaGAACCTGGGCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSGRSRT*NLGCAK
Trigger: TTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCC...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGCTTGGCCGTGGTCACTaGCCGCCAAGATCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VHRPVAPTQHRPDKSWKVLGRGH*PPRSGL
Trigger: TAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAG...CACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTACCAGGCCGTGCGGGTaGGCCCGCAGGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIATRPCG*ARRRHC
Trigger: ACAATGCCGCCTGCGGGCCCACCCGCACGGCCTGGT...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545009.1
3UTR CAA 72 bp CACAGGACAAGCCTGGTCTTCCTGGGTCCTGTTCCTTaGCCAGCACCGTCTTGCAGCCCCGTCTTCACGGGA +
Preference number: 4 (lower is better)
Translates to: HRTSLVFLGPVP*PAPSCSPVFTG
Trigger: TCCCGTGAAGACGGGGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTGTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACAGCGGCGCGTCCCGCTaGGCTGGGTCCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDSGASR*AGSMHL
Trigger: AAGATGCATGGACCCAGCTCAGCGGGACGCGCCGCT...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGGCCGCCTCTTGGCTaGTCAGGCCTGACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRGPPLG*SGLTKP
Trigger: GGGCTTGGTCAGGCCTGATCAGCCAAGAGGCGGCCC...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACCATCCCAGGCTGGGATaGAGGCCAAGGCCACCTACC +
Preference number: 4 (lower is better)
Translates to: LGRCQARHIPGNMSGRWNHPRLG*RPRPPT
Trigger: GGTAGGTGGCCTTGGCCTTCATCCCAGCCTGGGATG...GTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCATCCCAGGCTGGGATaGAGGCCAAGGCCACCTACC +
Preference number: 4 (lower is better)
Translates to: VSSALQSSYGSAKGTGMLHPRLG*RPRPPT
Trigger: GGTAGGTGGCCTTGGCCTTCATCCCAGCCTGGGATG...CAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GTGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCGGCAGGAGAATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VEGHIPDTKGPGANAALGGRRIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCC...GCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCTGCTGTGATCAGCCCTaGCCTGGGCACCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPCCDQP*PGHLFV
Trigger: GACAAACAGGTGCCCAGGTCAGGGCTGATCACAGCA...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCAGGGACAGTGGCCATTaGTTCCGGTGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLRDSGH*FRWALF
Trigger: GAACAAGGCCCACCGGAAGCAATGGCCACTGTCCCT...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCATCCTGTTCCAGGTCCTaGTCCAAGGTTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGRMKKLETTSWEGWGTASCSRS*SKVGRG
Trigger: GCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGA...TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAAGCTCTGAGCCCCGCTaGCTGTGTTTCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGRMKKLETTSWEGWGTASSEPR*LCFLGF
Trigger: GAAGCCCAGGAAACACAGGCAGCGGGGCTCAGAGCT...TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TGGCCAGGCCCCTGGCATCGTGCCGAGAGCACTCGGTACCACTCCATTCTCAACCTCAGAGCCTGTCCTTaGCCTTGTTCTGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: WPGPWHRAESTRYHSILNLRACP*PCSAPS
Trigger: ACTGGGTGCAGAACAAGGGCAAGGACAGGCTCTGAG...GTTGAGAATGGAGTGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp GCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCTACAGCAGGGCTCCCTaGAGCAGACGAGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ATCQEDGTQGCFPAPGVFYSRAP*SRRGVP
Trigger: AGGGACCCCTCGTCTGCTGCAGGGAGCCCTGCTGTA...GAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGTACAGCAGGGCTCCCTaGAGCAGACGAGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMYSRAP*SRRGVP
Trigger: AGGGACCCCTCGTCTGCTGCAGGGAGCCCTGCTGTA...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCCAAAGGGGACTGGAATaGTGCAGAGCCCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ATCQEDGTQGCFPAPGVFQRGLE*CRAPGS
Trigger: GGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTG...GAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGTCCAAAGCTGGCTCTaGCACCTGGGCAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTVQSWL*HLGKVF
Trigger: GAAAACCTTGCCCAGGTGGCAGAGCCAGCTTTGGAC...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCGCAAAAGACAGGCCCTaGTTGGCCGTGGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSAKDRP*LAVVTG
Trigger: GCCAGTGACCACGGCCAAGCAGGGCCTGTCTTTTGC...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGATGTGTCCTGCTGTCTaGCCCGTGGGAAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLMCPAV*PVGRAE
Trigger: CTCTGCTCTTCCCACGGGGCAGACAGCAGGACACAT...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGTGGGTCCTGTTCCTTTaGCAGCACCGTCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VHRPVAPTQHRPDKSWKVWVLFL*QHRLAA
Trigger: GGCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCA...CACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ACACAGAGACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTGGGACGTGGGGGGTCTCACGGTGTTaGCCAGGTTGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TQRQRTGSQTHRRGVGTWGVSRC*PGWSGT
Trigger: AGTTCCAGACCAACCTGGGCAACACCGTGAGACCCC...CCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGTCTCTGTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp ATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGACCCTAAACCAGGGGTaGAAACCAGGCCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: MCTDQWLPRSTGQTKAGRTLNQG*KPGRAG
Trigger: ACCCGCACGGCCTGGTTTGCACCCCTGGTTTAGGGT...CCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545009.1
CDS-3UTR CCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCGGAGGCCAGGGACAGTaGCCATTGCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCGGQGQ*PLLPVG
Trigger: GCCCACCGGAAGCAATGGCCACTGTCCCTGGCCTCC...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGTGGGCTGGGGGCTGCTaGCTGGAGAATCGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSEWAGGC*LENRAS
Trigger: AGAGGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCA...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCTGATGCCGGGGAGCTaGAGGGCCTCTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDLMPGS*RASLWP
Trigger: TGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCATCAG...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCTGGGTCCATGCATCTTaGCTCCTCCCCAGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCWVHAS*LLPRKV
Trigger: TACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCA...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGGCTTGTCAGCCCCATaGGAAGCCCGTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGGLSAP*EARLPG
Trigger: ACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCC...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCCTGTGTGTCCTGCGGTaGATGACCAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSLCVLR*MTRLEL
Trigger: GAGCTCCAGCCTGGTCATCCACCGCAGGACACACAG...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCGCTTCCTCTGCGGCCTaGGCATCCCAAATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSASSAA*ASQMSP
Trigger: AGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCTGAGTGTGTCTCTGTaGCTGAAGCCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWALSVSL*LKPLLC
Trigger: ACAGAGCAGGGGCTTCAGCCACAGAGACACACTCAG...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCAGCACATATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LATHPPWMCTDQWLPRSTYASSH*MLEAAD
Trigger: ATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATA...TGTGCTGCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCGCCCCGGGCTCCATTTaGAAACTCTGGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWAAPGSI*KLWQDE
Trigger: TTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGC...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACTCTGAGCAAACGCAGCCCTaGGCCCCGGCCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GFHSCPTTSEMTKPTKDSEQTQP*APALGR
Trigger: TCTCCCCAGGGCCGGGGCCCAGGGCTGCGTTTGCTC...AGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTGCCACTCACCCACCGTaGATGTGCACAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAATHPP*MCTDQW
Trigger: CCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGC...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGCCACTCACCCACCGTaGATGTGCACAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGATHPP*MCTDQW
Trigger: CCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGC...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCAGCCTCTCAAGTAGCTaGGACTACAGGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWASLSSS*DYRHTP
Trigger: TGGGGTGTGCCTGTAGTCCCAGCTACTTGAGAGGCT...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGGCAGGGGGAGGGAAGTaGGCAGACCCCAACCACACT +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMAGGGK*ADPNHT
Trigger: AGTGTGGTTGGGGTCTGCCCACTTCCCTCCCCCTGC...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGGCACCTGGGACTCACAGCTCCTACAAAACTCTCCCATCACGTGAGTGCTGAGTGTCCCAGCTTCCCCTaGGGTTCACCCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RHLGLTAPTKLSHHVSAECPSFP*GSPLAA
Trigger: GGCAGCCAGGGGTGAACCCCAGGGGAAGCTGGGACA...CTCAGCACTCACGTGATGGGAGAGTTTTGTAGGAGCTGTGAGTCCCAGGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCTTGCCCAGGTTGGTCTaGAACTCCTCTCAATCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSAAWASQMSPAGLILGLPRLV*NSSQSS
Trigger: GGAGGATTGAGAGGAGTTCCAGACCAACCTGGGCAA...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACGCTGACGCCATCTCCTaGTGCCGGGGAGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDADAIS*CRGAGG
Trigger: CCCTCCAGCTCCCCGGCATCAGGAGATGGCGTCAGC...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CCCAGCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGATTCGAGGCTGCAGTaGGCTATGATCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: PSFLCGLGIPNVPCWPHTDSRLQ*AMIMAL
Trigger: CAGTGCCATGATCATAGCTCACTGCAGCCTCGAATC...AGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCAAGGCCACCTACCTATaGGGAACAACCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPKATYL*GTTTAW
Trigger: CCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCTT...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TGGCTGAAGCCCCTGCTCTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGAAGGGACAGTGGCCATTaGTTCCGGTGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: WLKPLLCVTCSGCHWTLRRDSGH*FRWALF
Trigger: GAACAAGGCCCACCGGAAGCAATGGCCACTGTCCCT...TCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAGAGCAGGGGCTTCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCTTCCTGGGCTTCCGCTaGAGCCCTTCCACAAGGACC +
Preference number: 4 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELFLGFR*SPSTRT
Trigger: GGTCCTTGTGGAAGGGCTGCAGCGGAAGCCCAGGAA...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTGAGGATGGGCAGGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRMGRGLFSSSLVPGKRQTGHPP*HHRRPP
Trigger: TGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGT...CTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCCTGCCCATCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACAGGCCCCTGGCATCGTaGCGAGAGCACTCGGTACCA +
Preference number: 4 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHRPLAS*REHSVP
Trigger: TGGTACCGAGTGCTCTCGGCACGATGCCAGGGGCCT...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR GCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPIPNVP*WPHTGP
Trigger: TGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGAT...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp AGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGCAAAGGGGACTGGAATaGTGCAGAGCCCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RTLSHCLSWPLTHRGCAQQRGLE*CRAPGS
Trigger: GGAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTG...CTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGATGGAACTCAGGGGTaGTTTCCCGCCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRDGTQG*FPAPGV
Trigger: GACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCATGAGGAACAACCACTaGCTGGCTGGAACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWAMRNNH*LAGTFQ
Trigger: CTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCAT...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCCTCCAGGATGTGTCCTaGTGTCTGCCCCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATCQEDGTQGCFPAPGVFLQDVS*CLPRGK
Trigger: CTTCCCACGGGGCAGACAGCAGGACACATCCTGGAG...GAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTTGGAGGGCCTCTCTCTaGCCACAACAGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIAWRASL*PQQRAP
Trigger: AGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCA...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACCGCGTCCCGCTGAGCTaGGTCCATGCATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHRVPLS*VHASWL
Trigger: GAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCG...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGGGCTTGTCAGCCCCATaGGAAGCCCGTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMGLSAP*EARLPG
Trigger: ACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCC...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCTGTTCTGGCTGCCACTaGACACTCAGAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NQAAPFCRHRTEHTGARSCSGCH*TLRACP
Trigger: AGGACAGGCTCTGAGTGTCCAGTGGCAGCCAGAACA...GCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTTATGCCAGCAGCCACTaGATGCTGGAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSYASSH*MLEAAD
Trigger: ATCAGCTGCCTCCAGCATCCAGTGGCTGCTGGCATA...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGCCCCGGGCTCCATTTaGAAACTCTGGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPAPGSI*KLWQDE
Trigger: TTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGC...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCCCTGCAGAGCAGCTATaGATCTGCAAAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLPAEQL*ICKGDW
Trigger: CCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGG...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCCTTAGAAAGACAAAGTaGGGCAACCGTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGHIPDTKGPGANAALGPLRKTK*GNRGRP
Trigger: TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAG...GGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCCAACCACTGCCTGGCTaGAACGTTCCAGAACCCAGT +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPQPLPG*NVPEPS
Trigger: ACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTG...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTGGAGCATCCCAGGCTaGGATGAAGGCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRWSIPG*DEGQGH
Trigger: GTGGCCTTGGCCTTCATCCCAGCCTGGGATGCTCCA...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGGCAGGTCACGCACCTaGAACCTGGGCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RAPFGNSGRMKKLETTSWGRSRT*NLGCAK
Trigger: TTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCC...CCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGGCTGCGCTGGGGAGATaGGTGTCAGCAACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RTLSHCLSWPLTHRGCAQAALGR*VSATLG
Trigger: ACCCAGCGTTGCTGACACCCATCTCCCCAGCGCAGC...CTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGCTGGCTCTGCCACCTaGGCAAGGTTTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRAGSAT*ARFSRS
Trigger: GGAGCGTGAAAACCTTGCCCAGGTGGCAGAGCCAGC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTCAGATGTCTGCTCTCTaGACCCCACGTGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAQMSAL*TPRDLA
Trigger: GGCCAGATCACGTGGGGTCCAGAGAGCAGACATCTG...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTTCCACAGGACAAGCCTaGTCTTCCTGGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSSTGQA*SSWVLF
Trigger: GAACAGGACCCAGGAAGACCAGGCTTGTCCTGTGGA...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCTGTCCTGTGTAGAATaGAGCAGCGGCCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWALSCVE*SSGLTC
Trigger: ACAAGTGAGGCCGCTGCTCCATTCTACACAGGACAG...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCATCAGAAAGCAGCTCTaGGCCCCGCTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSIRKQL*APLPVF
Trigger: AAACACAGGCAGCGGGGCTCAGAGCTGCTTTCTGAT...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGGGATGAGAGTCCTGGAAAGGGAGTTTCAGGCCTGGTGATCAGGCTTTGGCACAGTGCGAGCTGTTGTTaGAGCGCTTCCCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RDESPGKGVSGLVIRLWHSASCC*SASRTG
Trigger: CCCAGTGCGGGAAGCGCTTCAACAACAGCTCGCACT...GTGCCAAAGCCTGATCACCAGGCCTGAAACTCCCTTTCCAGGACTCTCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp CTGGGGGCTGCTGGCTGGAGAATCGAGCCTCTTCCTCCAGGGACAGATCCTCTGTGTCTAGCAGTTTCCTaGATTCTGTGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LGAAGWRIEPLPPGTDPLCLAVS*ILCPGM
Trigger: CATCCCTGGGCACAGAATTCAGGAAACTGCTAGACA...CAGAGGATCTGTCCCTGGAGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR TCA 90 bp TGGCTGAAGCCCCTGCTCTGTGTCACCTGTTCTGGCTGCCACTGGACACTCAGAGTACCTCATGCCCCATaGGAGATCCCAGAGCTAGTC +
Preference number: 4 (lower is better)
Translates to: WLKPLLCVTCSGCHWTLRVPHAP*EIPELV
Trigger: GACTAGCTCTGGGATCTCTCATGGGGCATGAGGTAC...TCTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAGAGCAGGGGCTTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTAGGGACAGTGGCCATTaGTTCCGGTGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLRDSGH*FRWALF
Trigger: GAACAAGGCCCACCGGAAGCAATGGCCACTGTCCCT...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCCAGGGATAGCTGGGCTGGGGGCTaGTGGCTGGAGAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: QCFRTRLSSSFLNSVPRDSWAGG*WLENRA
Trigger: GGCTCGATTCTCCAGCCAGCAGCCCCCAGCCCAGCT...ATCCCTGGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCATCCCAAATGTCCCCTaGTGGCCTCATACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSIPNVP*WPHTGP
Trigger: TGGCCCAGTATGAGGCCAGCAGGGGACATTTGGGAT...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR GCA 90 bp CTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCACACCCACCGTGGATGTaGACAGACCAGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LYHTACLGHSPTVDVHRPHPPWM*TDQWLP
Trigger: TGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTG...TGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTGAGGGGCATTTTCATTaGAAGTCAAAGGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: HIPDTKGPGANAALGPGPEGHFH*KSKARQ
Trigger: CTGTCTTGCCTTTGACTTGCAATGAAAATGCCCCTC...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACAAGAGCCGGAAGAGCTaGCGGAAAGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRCQARHIPGNMSGRWNKSRKS*RKVSGL
Trigger: CAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTT...GTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCTGGGGGCTGCTGGCTaGAGAATCGAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCLGAAG*RIEPLP
Trigger: AGGAAGAGGCTCGATTCTCCAGCCAGCAGCCCCCAG...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGAAGTTCACGGGCACCTaGGACCAGGCCGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMKFTGT*DQAERK
Trigger: CTTCCTTTCGGCCTGGTCCCAGGTGCCCGTGAACTT...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTGCCATCACTGGGTCCATGCATCTTaGCTCCTCCCCAGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRALGTTPFSTGHPPCHHWVHAS*LLPRKV
Trigger: TACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCA...GTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTCGCGTCCCGCTGAGCTaGGTCCATGCATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRRVPLS*VHASWL
Trigger: GAGCCAAGATGCATGGACCCAGCTCAGCGGGACGCG...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTACGTCCTGGGAAGGCTaGGGTACAGCAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIATSWEG*GTAGLP
Trigger: AGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGT...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCCCTGCAGAGCAGCTATaGATCTGCAAAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSPAEQL*ICKGDW
Trigger: CCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGG...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GCTTCCTCTGCGGCCTGGGCATCCCAAATGTCCCCTGCTGGCCTCATACTGGGCAACATGTCAGGAAGATaGAACTCAGGGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ASSAAWASQMSPAGLILGNMSGR*NSGVLS
Trigger: GGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTT...GCCCAGTATGAGGCCAGCAGGGGACATTTGGGATGCCCAGGCCGCAGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTTCACACTGCTTGTCTTaGCCACTCACCCACCGTGGA +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGSHCLS*PLTHRG
Trigger: TCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGA...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp ATGTGCACAGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGCAACCACTGCCTGGCTaGAACGTTCCAGAACCCAGT +
Preference number: 4 (lower is better)
Translates to: MCTDQWLPRSTGQTKAGRQPLPG*NVPEPS
Trigger: ACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTG...CCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCTGTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCTCCTGGAGTGTGGCCTaGCCACATCTAGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELSWSVA*PHLAGY
Trigger: GTACCCAGCTAGATGTGGCCAGGCCACACTCCAGGA...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGCACACGCAGGCACCTaGGACTCACAGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRAHAGT*DSQLLQ
Trigger: TTGTAGGAGCTGTGAGTCCCAGGTGCCTGCGTGTGC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCCAAGCCTGGTCTTCCTaGGTCCTGTTCCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSQAWSS*VLFLCQ
Trigger: CTGGCAAAGGAACAGGACCCAGGAAGACCAGGCTTG...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTGAAACTCTGGCAGGATaGAGAAGCTGGAGACCACGT +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAETLAG*RSWRPR
Trigger: ACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTC...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTAGCTCTGAGCCCCGCTaGCTGTGTTTCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRSSEPR*LCFLGF
Trigger: GAAGCCCAGGAAACACAGGCAGCGGGGCTCAGAGCT...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp AGGCACCTGGGACTCACAGCTCCTACAAAACTCTCCCATCACGTGAGTGCTGAGACGGGCAGCTGGCAATaGTTTCGGACCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RHLGLTAPTKLSHHVSAETGSWQ*FRTRLS
Trigger: AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGT...CTCAGCACTCACGTGATGGGAGAGTTTTGTAGGAGCTGTGAGTCCCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTCAGAGCCTGTCCTTaGCCTTGTTCTGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMLRACP*PCSAPS
Trigger: ACTGGGTGCAGAACAAGGGCAAGGACAGGCTCTGAG...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGAGGTGTCTTCCGCCCTaGAGAGCAGCTATGGATCTG +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSERCLPP*RAAMDL
Trigger: CAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCT...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGAGGTGTCTTCCGCCCTaGAGAGCAGCTATGGATCTG +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMRCLPP*RAAMDL
Trigger: CAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCT...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp ACACAGAGACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTGGGACGTGGAGTGGTTTCCATAGCTaGCCTACGACTTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: TQRQRTGSQTHRRGVGTWSGFHS*PTTSEM
Trigger: CATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT...CCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGTCTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCCTGGAACCTGGGCTGTaGCAAAAGGTCAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTLEPGL*QKVKCA
Trigger: TGCACATTTGACCTTTTGGCACAGCCCAGGTTCCAG...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGGTCTTCCAGGATGAGTaGAGTGGCACAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLVFQDE*SGTITA
Trigger: AGCTGTGATTGTGCCACTGCACTCATCCTGGAAGAC...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGGTCAGCAACGCTGGGTaGTTTGCTAGCTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSEVSNAG*FASSWS
Trigger: ACTCCAGGAGCTAGCAAAGCACCCAGCGTTGCTGAC...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGCCACCTACCTATGAGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCATTTTCACGCTCCCAGTaGCCAGTTCCTCCACCCACA +
Preference number: 4 (lower is better)
Translates to: GHLPMRNNHCLAGTFQNPFSRSQ*PVPPPT
Trigger: TGTGGGTGGAGGAACTGGGCACTGGGAGCGTGAAAA...TGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp TGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCCGTCTTCACGGGATaGTTTTGTAACTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: WKATFQTLRGQEQTQPWAPVFTG*FCNCCD
Trigger: ATCACAGCAGTTACAAAAGCATCCCGTGAAGACGGG...GGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GCTTGGCCGTGGTCACTGGCCGCCAAGATCAGGGCTACAGATGTCTGCTCTCTGCTAGGCCTTCCACAGTaGTGGGATTATAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AWPWSLAAKIRATDVCSLLGLPQ*WDYSTV
Trigger: CACAGTGCTATAATCCCAGCACTGTGGAAGGCCTAG...CAGAGAGCAGACATCTGTAGCCCTGATCTTGGCGGCCAGTGACCACGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCGGCCATTGCTTCCGGTaGGCCTTGTTCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELGHCFR*ALFLFR
Trigger: CCTGAAAAGGAACAAGGCCCACCGGAAGCAATGGCC...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCCAGGGATGGAAAGTCTCAGGGCTaGGGTCCTCCGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: QCFRTRLSSSFLNSVPRDGKSQG*GPPSPR
Trigger: CCGTGGAGACGGAGGACCCCAGCCCTGAGACTTTCC...ATCCCTGGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp AGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGCCGCCGTCCTCCAACTaGATCCCAGGTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: RTLSHCLSWPLTHRGCAQPPSSN*IPGPSF
Trigger: GAATGAAGGACCTGGGATCCAGTTGGAGGACGGCGG...CTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGGTGCTTGGTCAAGTaGGACGTCTTGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSWCLVK*DVLLKP
Trigger: AGGCTTCAGCAAGACGTCCCACTTGACCAAGCACCA...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CCA 90 bp AGGCACCTGGGACTCACAGCTCCTACAAAACTCTCCCATCACGTGAGTGCTGAGCCAAATGTCCCCTGCTaGCCTCATACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RHLGLTAPTKLSHHVSAEPNVPC*PHTGPW
Trigger: CCATGGCCCAGTATGAGGCCAGCAGGGGACATTTGG...CTCAGCACTCACGTGATGGGAGAGTTTTGTAGGAGCTGTGAGTCCCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGCAGCCACTGGATGCTaGAGGCAGCTGATGGACCCT +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRAATGC*RQLMDP
Trigger: AGGGTCCATCAGCTGCCTCCAGCATCCAGTGGCTGC...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTCTGGAGACCACGTCCTaGGAAGGCTGGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIALETTS*EGWGTA
Trigger: TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAG...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTAAAGTGGGGCAACCGTaGAAGGCCACATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGKVGQP*KATFQT
Trigger: TGTCTGGAATGTGGCCTTCCACGGTTGCCCCACTTT...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGGAACAACCACTGCCTaGCTGGAACGTTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRGTTTA*LERSRT
Trigger: GGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGTGCTTTGCTAGCTCCTaGAGTGTGGCCTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: RAPFGNSGRMKKLETTSWCFASS*SVAWPH
Trigger: ATGTGGCCAGGCCACACTCCAGGAGCTAGCAAAGCA...CCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCATCACCAGCAAAAACTaGGGACATCTGCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSITSKN*GHLLAP
Trigger: GGGGGCAAGCAGATGTCCCCAGTTTTTGCTGGTGAT...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 72 bp GTAACTGCTGTGATCAGCCCTGACCTGGGCACCTGTTaGTCTCCCCAACCTTGTCTCCAGGATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VTAVISPDLGTC*SPQPCLQDVSC
Trigger: GCAGGACACATCCTGGAGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTCAGGGCTGATCACAGCAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCGACAGATCCTCTGGCTaGGCCTCTGCCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCDRSSG*ASAWCF
Trigger: AAAACACCAGGCAGAGGCTCAGCCAGAGGATCTGTC...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACAGTGCGAGCTGTTGTTaGAGCGCTTCCCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDSASCC*SASRTG
Trigger: CCCAGTGCGGGAAGCGCTTCAACAACAGCTCGCACT...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp ACACAGAGACAGCGCACAGGGTCACAGACACACAGGAGAGGGGTTGGGACGTGGTGTCAGTTAAGGGAATaGGAAAAAGGGCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: TQRQRTGSQTHRRGVGTWCQLRE*EKGQVT
Trigger: CGTGACCTGCCCTTTTTCTCATTCCCTTAACTGACA...CCACGTCCCAACCCCTCTCCTGTGTGTCTGTGACCCTGTGCGCTGTCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCATGCCCAGGCTGCTCTTaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSCPGCS*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCAAGAGCAGCCTGGGCA...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCAGTGTGTGTGCGCTGGTaGTTGGTCAAGTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSVCVRW*LVKWDV
Trigger: GACGTCCCACTTGACCAAGCACCAGCGCACACACAC...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TCCCAGGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTAGGACTCTATCACACTaGTTGTCTTGGCCACTCACC +
Preference number: 4 (lower is better)
Translates to: SQATCQEDGTQGCFPAPGRTLSH*LSWPLT
Trigger: GGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT...ACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp TCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCACTGGAACCTGGGCTGTaGCAAAAGGTCAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: SGRMKKLETTSWEGWGTALEPGL*QKVKCA
Trigger: TGCACATTTGACCTTTTGGCACAGCCCAGGTTCCAG...TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGACAATCACAGCTCACTaGAGCCTCAACTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAGTFQNPVVSIAALRLPTITAH*SLNFLG
Trigger: GCCCAGGAAGTTGAGGCTGCAGTGAGCTGTGATTGT...CGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTCTCTCTCTATACCTCTaGCCAGACACAGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKALSLYL*PDTGRE
Trigger: CTCTCTTCCTGTGTCTGGCCAGAGGTATAGAGAGAG...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCAAAGAGCCGGAAGAGCTaGCGGAAAGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSKSRKS*RKVSGL
Trigger: CAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTT...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTTGGTGCTTGGTCAAGTaGGACGTCTTGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLWCLVK*DVLLKP
Trigger: AGGCTTCAGCAAGACGTCCCACTTGACCAAGCACCA...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTGGTGCTTGGTCAAGTaGGACGTCTTGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRWCLVK*DVLLKP
Trigger: AGGCTTCAGCAAGACGTCCCACTTGACCAAGCACCA...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACACACAGGAGAGGGGTTaGGACGTGGGGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDTQERG*DVGMRL
Trigger: CAGCCTCATCCCCACGTCCCAACCCCTCTCCTGTGT...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCAACATGTCAGGAAGATaGAACTCAGGGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPNMSGR*NSGVLS
Trigger: GGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTT...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACTCACACTGCTTGTCTTaGCCACTCACCCACCGTGGA +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDSHCLS*PLTHRG
Trigger: TCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGA...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGACACGCACCTGGAACCTaGGCTGTGCCAAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: AGTFQNPVVSIAALRLPRHAPGT*AVPKGQ
Trigger: TTGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTG...TCTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCACACGCACCTGGAACCTaGGCTGTGCCAAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LYHTACLGHSPTVDVHRPHAPGT*AVPKGQ
Trigger: TTGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTG...TGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGGGCCTTCCACAGTGCTaGGATTATAGCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSEGLPQC*DYSTVS
Trigger: GCTCACAGTGCTATAATCCCAGCACTGTGGAAGGCC...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTATCAGAAAGCAGCTCTaGGCCCCGCTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIAIRKQL*APLPVF
Trigger: AAACACAGGCAGCGGGGCTCAGAGCTGCTTTCTGAT...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGTGTCTAGCAGTTTCCTaGATTCTGTGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSECLAVS*ILCPGM
Trigger: CATCCCTGGGCACAGAATTCAGGAAACTGCTAGACA...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTAAGGCCACCTACCTATaGGGAACAACCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRKATYL*GTTTAW
Trigger: CCAGGCAGTGGTTGTTCCTCATAGGTAGGTGGCCTT...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACTCTTGCCCAGGCTGCTCTTaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GFHSCPTTSEMTKPTKDSCPGCS*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCAAGAGCAGCCTGGGCA...AGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCCAGGGATAACTCTCCCATCACGTaGGTGCTGAGGATGACGCCC +
Preference number: 4 (lower is better)
Translates to: QCFRTRLSSSFLNSVPRDNSPIT*VLRMTP
Trigger: GGGCGTCATCCTCAGCACTCACGTGATGGGAGAGTT...ATCCCTGGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCGCCTGGGTAATGAAGTaGGACTGTGTCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLAWVMK*DCVSKQ
Trigger: TTGTTTTGAGACACAGTCTCACTTCATTACCCAGGC...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp GGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACTCTGTGTGTGTGCGCTGGTaGTTGGTCAAGTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: GFHSCPTTSEMTKPTKDSVCVRW*LVKWDV
Trigger: GACGTCCCACTTGACCAAGCACCAGCGCACACACAC...AGAGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGGAGCAGCTATGGATCTaGAAAGGGGACTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSEEQLWI*KGDWNA
Trigger: AGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTC...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGGAGCAGCTATGGATCTaGAAAGGGGACTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKREQLWI*KGDWNA
Trigger: AGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTC...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp CTGGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACAGGACTCTATCACACTaGTTGTCTTGGCCACTCACC +
Preference number: 4 (lower is better)
Translates to: LGRCQARHIPGNMSGRWNRTLSH*LSWPLT
Trigger: GGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT...GTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCCCTACGACTTCCGAGAGTGGTTTCCATAGCTaGCCTACGACTTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: GWNVPEPSGFHSCPTTSESGFHS*PTTSEM
Trigger: CATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT...CTCGGAAGTCGTAGGGCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AAGGTGAAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAACCGTGGAAGGCCACCCGTGTGTGTGCGCTaGTGCTTGGTCAAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KVKASYLRKTKWGNRGRPPVCVR*CLVKWD
Trigger: GTCCCACTTGACCAAGCACCAGCGCACACACACGGG...TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp CAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCCAGGGATATCTGCAAAGGGGACTaGAATGCTGCAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QCFRTRLSSSFLNSVPRDICKGD*NAAEPR
Trigger: CCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGAT...ATCCCTGGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCTTAGAAAGACAAAGTaGGGCAACCGTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLLRKTK*GNRGRP
Trigger: TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAG...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CAA 72 bp ACTAAACCCACCAAGGACTCTATCACACTGCTTGTCTaGGCCACTCACCCACCGTGGATGTGCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: TKPTKDSITLLV*ATHPPWMCTDQ
Trigger: CTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
3UTR CAA 72 bp GCTGTCCTGTGTAGAATGGAGCAGCGGCCTCACTTGTaGATCACCAGCAAAAACTGGGGACATCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: AVLCRMEQRPHL*ITSKNWGHLLA
Trigger: GGCAAGCAGATGTCCCCAGTTTTTGCTGGTGATCAACAAGTGAGGCCGCTGCTCCATTCTACACAGGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCCAGACCTCAGAATGTaGCCTTATTTGGAAACACGG +
Preference number: 4 (lower is better)
Translates to: VSSALQSSYGSAKGTGMLPDLRM*PYLETR
Trigger: CCGTGTTTCCAAATAAGGTCACATTCTGAGGTCTGG...CAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTACAAAAGCTGGAAGGTaGAGGCTTCTTACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSTKAGR*RLLTLE
Trigger: TTCTAAGGTAAGAAGCCTTCACCTTCCAGCTTTTGT...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR GCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCAATGAGGAACAACCACTaGCTGGCTGGAACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSMRNNH*LAGTFQ
Trigger: CTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCTCAT...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGTCATGGGTCCATGCATCTTaGCTCCTCCCCAGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NEKKGRSRTWNLGCAKRSWVHAS*LLPRKV
Trigger: TACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCA...TGACCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACCTGTGTCACCTGTTCTaGCTGCCACTGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDLCHLF*LPLDTQ
Trigger: CTGAGTGTCCAGTGGCAGCCAGAACAGGTGACACAG...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTGAGGATGGGCAGGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGAAAGTGGGGCAACCGTaGAAGGCCACATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LRMGRGLFSSSLVPGKRQKVGQP*KATFQT
Trigger: TGTCTGGAATGTGGCCTTCCACGGTTGCCCCACTTT...CTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCCTGCCCATCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTAAACCCACCAAGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTCTGCTGTCTGCCCCGTaGGAAGAGCAGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: LNPPRTLSHCLSWPLTHRLLSAP*EEQRNH
Trigger: ATGATTTCTCTGCTCTTCCCACGGGGCAGACAGCAG...ACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCTTGGTGGGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTCTACGACTTCCGAGATaGCTAAACCCACCAAGGACT +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIALRLPR*LNPPRT
Trigger: AGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAG...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp TCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCATATACAGTGACTAGGTaGCAAATGCAATGGAGCATC +
Preference number: 4 (lower is better)
Translates to: SGRMKKLETTSWEGWGTAYTVTR*QMQWSI
Trigger: GATGCTCCATTGCATTTGTCACCTAGTCACTGTATA...TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACTGTCAGTTAAGGGAATaGGAAAAAGGGCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDCQLRE*EKGQVT
Trigger: CGTGACCTGCCCTTTTTCTCATTCCCTTAACTGACA...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGAGGCCAGACAAAAGCTaGAAGGTGAAGGCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: RTLSHCLSWPLTHRGCAQRPDKS*KVKASY
Trigger: GTAAGAAGCCTTCACCTTCCAGCTTTTGTCTGGCCT...CTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp AAGGTGAAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAACCGTGGAAGGCCAGGAACAACCACTGCCTaGCTGGAACGTTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: KVKASYLRKTKWGNRGRPGTTTA*LERSRT
Trigger: GGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCC...TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACCTACGACTTCCGAGATaGCTAAACCCACCAAGGACT +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDLRLPR*LNPPRT
Trigger: AGTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAG...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGCACGTATATACAGTaGCTAGGTGACAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSCTYIQ*LGDKCN
Trigger: ATTGCATTTGTCACCTAGTCACTGTATATACGTGCA...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGTGGTTTCCATAGCTGCCCTACGACTTCCGAGATGACTAAACCCACCAAGGACCCTCACTGGACTGCATaGGATAACATCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: SGFHSCPTTSEMTKPTKDPHWTA*DNITAH
Trigger: GTGTGCTGTGATGTTATCTCATGCAGTCCAGTGAGG...GTCCTTGGTGGGTTTAGTCATCTCGGAAGTCGTAGGGCAGCTATGGAAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp TCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCATTCCAAGTTCAACTCTaGATTACTGTGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: SGRMKKLETTSWEGWGTAFQVQL*ITVSVK
Trigger: CTTGACAGACACAGTAATTCAGAGTTGAACTTGGAA...TGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CCA 90 bp CTGAGGATGGGCAGGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGAGGCCAGACAAAAGCTaGAAGGTGAAGGCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LRMGRGLFSSSLVPGKRQRPDKS*KVKASY
Trigger: GTAAGAAGCCTTCACCTTCCAGCTTTTGTCTGGCCT...CTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCCTGCCCATCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACTATACAGTGACTAGGTaGCAAATGCAATGGAGCATC +
Preference number: 4 (lower is better)
Translates to: DSITLLVLATHPPWMCTDYTVTR*QMQWSI
Trigger: GATGCTCCATTGCATTTGTCACCTAGTCACTGTATA...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR TCA 90 bp CAGGTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGTGCACGTATATACAGTaGCTAGGTGACAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: QVSSALQSSYGSAKGTGMCTYIQ*LGDKCN
Trigger: ATTGCATTTGTCACCTAGTCACTGTATATACGTGCA...CATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CCA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCTGTGAGCTGCCAGCCTaGCTTTTAATGAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCCELPA*LLMNFL
Trigger: CAAAAAGTTCATTAAAAGCCAGGCTGGCAGCTCACA...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
3UTR CAA 72 bp AATGCTGTCCTGTGTAGAATGGAGCAGCGGCCTCACTaGTTGATCACCAGCAAAAACTGGGGACATCTGCTT +
Preference number: 4 (lower is better)
Translates to: NAVLCRMEQRPH*LITSKNWGHLL
Trigger: AAGCAGATGTCCCCAGTTTTTGCTGGTGATCAACAAGTGAGGCCGCTGCTCCATTCTACACAGGACAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTACAAAAGCTGGAAGGTaGAGGCTTCTTACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIATKAGR*RLLTLE
Trigger: TTCTAAGGTAAGAAGCCTTCACCTTCCAGCTTTTGT...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR GCA 90 bp GAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGGGAGTAACGAGAATTTaGTTTCTCTTTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EPRAPFGNSGRMKKLETTGVTRI*FLFLFF
Trigger: AAAGAAGAGAAAGAGAAAGCAAATTCTCGTTACTCC...CGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR TCA 90 bp AGATTCTCAAGGCCTTTGACCTTTATGAATCTAGACAGAATACTGGAAACCCCTGAAACTCTGGCAGGATaGAGAAGCTGGAGACCACGT +
Preference number: 4 (lower is better)
Translates to: RFSRPLTFMNLDRILETPETLAG*RSWRPR
Trigger: ACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTC...AGGGGTTTCCAGTATTCTGTCTAGATTCATAAAGGTCAAAGGCCTTGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS GCA 90 bp CAGCCAGGGACGCCAGAGCCGGGGCCGAAGACCCTAAACCAGGGGTaGAAACCAGGCCGTGCGGGTGGGCCCGCAGGCGGCATTGTGGGT +
Preference number: 5 (lower is better)
Translates to: QPGTPEPGPKTLNQG*KPGRAGGPAGGIVG
Trigger: ACCCACAATGCCGCCTGCGGGCCCACCCGCACGGCCTGGTTTGCACCCCTGGTTTAGGGTCTTCGGCCCCGGCTCTGGCGTCCCTGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545009.1
CDS-3UTR CAA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCGGGCAGGTGTACGGCTaGTCAGCCCCATGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGGQVYG*SAPWEA
Trigger: GGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCC...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CAA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCTGGTGCGTGCTGAAGTaGGAGCGGTCGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGWCVLK*ERSLKP
Trigger: GGGCTTTAGCGACCGCTCCAACTTCAGCACGCACCA...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CAA 90 bp CGGGGCAGGTGTACGGCTTGTCAGCCCCATGGGAAGCCCGTCTTCCTGGTGGGGCCTGGTGATCAGGCTTaGGCACCGGGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RGRCTACQPHGKPVFLVGPGDQA*APGPPG
Trigger: TCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGG...CCCCACCAGGAAGACGGGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CAA 90 bp CATCACCACCTTGGGCCCCACGGTGCCACGGGCTCAGGCAGCACAGTAGGGCGCCAGGGACAGTGGCCATaGCTTCCGGTGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: HHHLGPHGATGSGSTVGRQGQWP*LPVGLV
Trigger: AACAAGGCCCACCGGAAGCAATGGCCACTGTCCCTG...GCGCCCTACTGTGCTGCCTGAGCCCGTGGCACCGTGGGGCCCAAGGTGGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp TGCCGGGGAGCTGGAGGGCCTCTCTCTGGCCACAACAGCGGGCCCCTCTGTGGCCTGGGTCCATGCATCTaGGCTCCTCCCCAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: CRGAGGPLSGHNSGPLCGLGPCI*APPQKG
Trigger: ACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAG...GCCACAGAGGGGCCCGCTGTTGTGGCCAGAGAGAGGCCCTCCAGCTCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CAA 90 bp CAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCTGCGGGCCTCAGGCTaGGCAGCCAGGGACGCCAGA +
Preference number: 5 (lower is better)
Translates to: QDEEAGDHVLGRLGYSRALRASG*AARDAR
Trigger: TCTGGCGTCCCTGGCTGCCAAGCCTGAGGCCCGCAG...AGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTGCCATCACTGGGTCCGCTGGTGCTaGTGCAGGTCGGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: PRALGTTPFSTGHPPCHHWVRWC*CRSVPR
Trigger: CCGGGGCACCGACCTGCACAAGCACCAGCGGACCCA...GTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589422.1
CDS-3UTR CAA 90 bp GTGGAAGGCCACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCGGGCAGGTGTACGGCTaGTCAGCCCCATGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VEGHIPDTKGPGANAALGGQVYG*SAPWEA
Trigger: GGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCC...GCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTGGCCTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp GCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCCTGCGGGCCTCAGGCTaGGCAGCCAGGGACGCCAGA +
Preference number: 5 (lower is better)
Translates to: ATCQEDGTQGCFPAPGVFLRASG*AARDAR
Trigger: TCTGGCGTCCCTGGCTGCCAAGCCTGAGGCCCGCAG...GAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp GCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCACTGGGGACATCTGCTaGCCCCCTGCCAAGACCCGG +
Preference number: 5 (lower is better)
Translates to: ALQSSYGSAKGTGMLQSPTGDIC*PPAKTR
Trigger: CCGGGTCTTGGCAGGGGGCAAGCAGATGTCCCCAGT...GGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS GCA 90 bp CCGAGAGCACTCGGTACCACTCCATTCTCAACGGGGCATCCTCCCTaGCATCACCGCCGTCCTCCAACTGGATCCCAGGTCCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: PRALGTTPFSTGHPP*HHRRPPTGSQVLRQ
Trigger: CTGTCTCAGGACCTGGGATCCAGTTGGAGGACGGCGGTGATGGCAGGGAGGATGCCCCGTTGAGAATGGAGTGGTACCGAGTGCTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591026.1
CDS CCA 90 bp AGGATCTCTTCCTGTTCCAGGTCCTGCTCCAAGGTTGGCAGGGGCTaGAGGCCAGGGACAGTGGCCATTGCTTCCGGTGGGCCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RISSCSRSCSKVGRG*RPGTVAIASGGPCS
Trigger: GGAACAAGGCCCACCGGAAGCAATGGCCACTGTCCCTGGCCTCCAGCCCCTGCCAACCTTGGAGCAGGACCTGGAACAGGAAGAGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219478.11
ENST00000545009.1
ENST00000585977.1
ENST00000588602.1
ENST00000589422.1
CDS-3UTR CAA 90 bp GAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCCCTGCATCACACTGCTTGTCTaGGCCACTCACCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: EEAGDHVLGRLGYSRAPCITLLV*ATHPPW
Trigger: CCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGAT...GCAGGGAGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp CAGGATGAAGAAGCTGGAGACCACGTCCTGGGAAGGCTGGGGTACAGCAGGGCTCAGGGACAGTGGCCATaGCTTCCGGTGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: QDEEAGDHVLGRLGYSRAQGQWP*LPVGLV
Trigger: AACAAGGCCCACCGGAAGCAATGGCCACTGTCCCTG...AGCCCTGCTGTACCCCAGCCTTCCCAGGACGTGGTCTCCAGCTTCTTCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp ACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTCAGGGACAGTGGCCATaGCTTCCGGTGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: TGPWEETGSWQCFRTRLSQGQWP*LPVGLV
Trigger: AACAAGGCCCACCGGAAGCAATGGCCACTGTCCCTG...AGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CAA 90 bp GGCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTGGGCAGGTGTACGGCTaGTCAGCCCCATGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GNMSGRWNSGVLSRPRCLGQVYG*SAPWEA
Trigger: GGCTTCCCATGGGGCTGACAAGCCGTACACCTGCCC...AAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp GGGAATGAGAAAAAGGGCAGGTCACGCACCTGGAACCTGGGCTGTGCCAAAAGGCCTGGTGATCAGGCTTaGGCACCGGGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GNEKKGRSRTWNLGCAKRPGDQA*APGPPG
Trigger: TCCTGGAGGCCCCGGTGCCAAAGCCTGATCACCAGG...CCTTTTGGCACAGCCCAGGTTCCAGGTGCGTGACCTGCCCTTTTTCTCATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp CACATTCCAGACACTAAGGGGCCAGGAGCAAACGCAGCCCTGGGCCCCGGCCCTGAGCAGCGGCCTCACTaGTTGATCACCAGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: HIPDTKGPGANAALGPGPEQRPH*LITSKN
Trigger: GTTTTTGCTGGTGATCAACAAGTGAGGCCGCTGCTC...AGGGCCGGGGCCCAGGGCTGCGTTTGCTCCTGGCCCCTTAGTGTCTGGAATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp AGACCAGTGGCTCCCACGCAGCACAGGCCAGACAAAAGCTGGAAGGTGAAGGCTGCAACGCTGGGTGCTTaGCTAGCTCCTGGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPVAPTQHRPDKSWKVKAATLGA*LAPGVW
Trigger: CCACACTCCAGGAGCTAGCAAAGCACCCAGCGTTGC...AGCCTTCACCTTCCAGCTTTTGTCTGGCCTGTGCTGCGTGGGAGCCACTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp CTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACCAGTGGCTCCCACGCAGCCAAGATCGTGCCTaGCACTCCAGCCTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: LVLATHPPWMCTDQWLPRSQDRA*HSSLGN
Trigger: ATTACCCAGGCTGGAGTGCAAGGCACGATCTTGGCT...GCGTGGGAGCCACTGGTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp AGGACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGAAAGACAGGCCCTGCTaGGCCGTGGTCACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: RTLSHCLSWPLTHRGCAQKDRPC*AVVTGR
Trigger: GCGGCCAGTGACCACGGCCAAGCAGGGCCTGTCTTT...CTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GCAACATGTCAGGAAGATGGAACTCAGGGGTGCTTTCCCGCCCCAGGTGTCTTCGAAATCATCACCACCTaGGGCCCCACGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: ATCQEDGTQGCFPAPGVFEIITT*GPTVPR
Trigger: CCGTGGCACCGTGGGGCCCAAGGTGGTGATGATTTC...GAAGACACCTGGGGCGGGAAAGCACCCCTGAGTTCCATCTTCCTGACATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCGACCTGGGCACCTGTTaGTCTCCCCAACCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLDLGTC*SPQPCL
Trigger: GAGACAAGGTTGGGGAGACAAACAGGTGCCCAGGTC...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCTTTGCCAGCACCGTCTaGCAGCCCCGTCTTCACGGG +
Preference number: 5 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELFASTV*QPRLHG
Trigger: CCCGTGAAGACGGGGCTGCAAGACGGTGCTGGCAAA...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GAGCCCCGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGCTGGGTCCTGTTCCTTaGCCAGCACCGTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: EPRAPFGNSGRMKKLETTLGPVP*PAPSCS
Trigger: GCTGCAAGACGGTGCTGGCAAAGGAACAGGACCCAG...CGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp AAGGTGAAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAACCGTGGAAGGCCATGGGTCCGCTGGTGCTaGTGCAGGTCGGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: KVKASYLRKTKWGNRGRPWVRWC*CRSVPR
Trigger: CCGGGGCACCGACCTGCACAAGCACCAGCGGACCCA...TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GTGTCTTCCGCCCTGCAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGTGGGGTCTCACGGTGTaGCCCAGGTTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VSSALQSSYGSAKGTGMLWGLTV*PRLVWN
Trigger: GTTCCAGACCAACCTGGGCAACACCGTGAGACCCCA...CAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTGCAGGGCGGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCCTGGGTCCATGCATCTaGGCTCCTCCCCAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELLGPCI*APPQKG
Trigger: ACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAG...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp GGGGAGATGTCAGGCCCGTCACATCCCAGGCAACATGTCAGGAAGATGGAACTCATCACACTGCTTGTCTaGGCCACTCACCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: GEMSGPSHPRQHVRKMELITLLV*ATHPPW
Trigger: CCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGAT...GAGTTCCATCTTCCTGACATGTTGCCTGGGATGTGACGGGCCTGACATCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp TGGCCTCATACTGGGCCATGGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCTTTGTCTCCCCAACCTaGTCTCCAGGATGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: WPHTGPWEETGSWQCFRTFVSPT*SPGCVL
Trigger: CAGGACACATCCTGGAGACAAGGTTGGGGAGACAAA...GGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCCATGGCCCAGTATGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp AGGAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTTGGTGCGTGCTGAAGTaGGAGCGGTCGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RNNHCLAGTFQNPVVSIAWCVLK*ERSLKP
Trigger: GGGCTTTAGCGACCGCTCCAACTTCAGCACGCACCA...AGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp CAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCTGAATTCTGTGCCCAGGGATTGGTGCGTGCTGAAGTaGGAGCGGTCGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QCFRTRLSSSFLNSVPRDWCVLK*ERSLKP
Trigger: GGGCTTTAGCGACCGCTCCAACTTCAGCACGCACCA...ATCCCTGGGCACAGAATTCAGGAAACTGCTAGACAGCCTGGTCCGAAAGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000589422.1
CDS-3UTR CAA 90 bp CGGGCTCCATTTGGAAACTCTGGCAGGATGAAGAAGCTGGAGACCACGTCCTGGACTCTATCACACTGCTaGTCTTGGCCACTCACCCAC +
Preference number: 5 (lower is better)
Translates to: RAPFGNSGRMKKLETTSWTLSHC*SWPLTH
Trigger: GTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGT...CCAGGACGTGGTCTCCAGCTTCTTCATCCTGCCAGAGTTTCCAAATGGAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp CAGAGCAGCTATGGATCTGCAAAGGGGACTGGAATGCTGCAGAGCCCCGGGCTCTCTTCTCATCAAGCCTaGTACCAGGCAAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: QSSYGSAKGTGMLQSPGLSSHQA*YQAKDR
Trigger: CCTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGA...GAGCCCGGGGCTCTGCAGCATTCCAGTCCCCTTTGCAGATCCATAGCTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCACGGTGTTGCCCAGGTaGGTCTGGAACTCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCTVLPR*VWNSSQ
Trigger: TTGAGAGGAGTTCCAGACCAACCTGGGCAACACCGT...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GACTCTATCACACTGCTTGTCTTGGCCACTCACCCACCGTGGATGTGCACAGACACTCTATCACACTGCTaGTCTTGGCCACTCACCCAC +
Preference number: 5 (lower is better)
Translates to: DSITLLVLATHPPWMCTDTLSHC*SWPLTH
Trigger: GTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGT...GTCTGTGCACATCCACGGTGGGTGAGTGGCCAAGACAAGCAGTGTGATAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp GGGAGGAAACGGGCAGCTGGCAATGCTTTCGGACCAGGCTGTCTAGCAGTTTCCAGAGGTCTTTCTATATaGCCCAGGCTGCTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GRKRAAGNAFGPGCLAVSRGLSI*PRLLLN
Trigger: GTTCAAGAGCAGCCTGGGCAATATAGAAAGACCTCT...GGAAACTGCTAGACAGCCTGGTCCGAAAGCATTGCCAGCTGCCCGTTTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp AAGGTGAAGGCTTCTTACCTTAGAAAGACAAAGTGGGGCAACCGTGGAAGGCCACTGGGTCCATGCATCTaGGCTCCTCCCCAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: KVKASYLRKTKWGNRGRPLGPCI*APPQKG
Trigger: ACCTTTCTGGGGAGGAGCCAAGATGCATGGACCCAG...TGGCCTTCCACGGTTGCCCCACTTTGTCTTTCTAAGGTAAGAAGCCTTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp CTGAGGATGGGCAGGGGTCTCTTCTCATCAAGCCTTGTACCAGGCAAAAGACAGCAGCGGCCTCACTTGTaGATCACCAGCAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: LRMGRGLFSSSLVPGKRQQRPHL*ITSKNW
Trigger: CCAGTTTTTGCTGGTGATCAACAAGTGAGGCCGCTG...CTGTCTTTTGCCTGGTACAAGGCTTGATGAGAAGAGACCCCTGCCCATCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS-3UTR CAA 90 bp GAACAACCACTGCCTGGCTGGAACGTTCCAGAACCCAGTGGTTTCCATAGCTGCAGAGGTCTTTCTATATaGCCCAGGCTGCTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EQPLPGWNVPEPSGFHSCRGLSI*PRLLLN
Trigger: GTTCAAGAGCAGCCTGGGCAATATAGAAAGACCTCT...GCAGCTATGGAAACCACTGGGTTCTGGAACGTTCCAGCCAGGCAGTGGTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS-3UTR CAA 90 bp AACCAGGCAGCCCCATTCTGCAGACACAGGACAGAGCACACAGGGGCCAGAAGCAGGAGTAACGAGAATTaGCTTTCTCTTTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NQAAPFCRHRTEHTGARSRSNEN*LSLSLL
Trigger: AAGAAGAGAAAGAGAAAGCAAATTCTCGTTACTCCT...GCTTCTGGCCCCTGTGTGCTCTGTCCTGTGTCTGCAGAATGGGGCTGCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219478.11
CDS CCA 72 bp AGAAGAGCCGGAAGAGCTGGCGGAAAGTCTCAGGGCTaGGGTCCTCCGTCTCCACGGAGGGCTCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RRAGRAGGKSQG*GPPSPRRAPLP
Trigger: TGGAAGAGGAGCCCTCCGTGGAGACGGAGGACCCCAGCCCTGAGACTTTCCGCCAGCTCTTCCGGCTCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219478.11
ENST00000545009.1
ENST00000588602.1
ENST00000589422.1
CDS CCA 72 bp CAGAAAGCAGCTCTGAGCCCCGCTGCCTGTGTTTCCTaGGCTTCCGCTGCAGCCCTTCCACAAGGACCACGG +
Preference number: 6 (lower is better)
Translates to: QKAALSPAACVS*ASAAALPQGPR
Trigger: CCGTGGTCCTTGTGGAAGGGCTGCAGCGGAAGCCCAGGAAACACAGGCAGCGGGGCTCAGAGCTGCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219478.11
ENST00000545009.1
CDS TCA 72 bp TGGACAGAGCTGGGCAGAATCTCATTCCTTCCCTTCTaGGGATTCCACGTAACCACTTGGGAGCCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: WTELGRISFLPF*GFHVTTWEPGG
Trigger: CCCTCCCGGCTCCCAAGTGGTTACGTGGAATCCTCAGAAGGGAAGGAATGAGATTCTGCCCAGCTCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592425.1
CDS CAA 72 bp CTCATTCCTTCCCTTCTGAGGATTCCACGTAACCACTaGGGAGCCGGGAGGGCTGGCAAATTCTTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: LIPSLLRIPRNH*GAGRAGKFFPF
Trigger: AAAGGGAAAGAATTTGCCAGCCCTCCCGGCTCCCAAGTGGTTACGTGGAATCCTCAGAAGGGAAGGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592425.1
CDS TCA 72 bp TCTTTCCCTTTTGACTTCTGCCTTTTGCACAGGGAATaGACTGGACCACAGGTAATGTGCGCTCAGAGATCT +
Preference number: 6 (lower is better)
Translates to: SFPFDFCLLHRE*TGPQVMCAQRS
Trigger: AGATCTCTGAGCGCACATTACCTGTGGTCCAGTTCATTCCCTGTGCAAAAGGCAGAAGTCAAAAGGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592425.1