RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF496 (Homo sapiens)

Ensembl gene IDs: ENSG00000162714

Ensembl transcript IDs: ENST00000294753.8, ENST00000461277.2, ENST00000462139.1, ENST00000477903.1, ENST00000478225.5, ENST00000682384.1

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTACCTaGGAGCAAGGACAGGAGGGAGGTGTGCTCTCTATCCTGGGGAAG +
Preference number: 1 (lower is better)
Translates to: GEGECSHGTTRTLTT*EQGQEGGVLSILGK
Trigger: CTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR TCA 90 bp CACTGTGGTGAAGGGTGTTGGGCTGGAGGGTTGGCCGACCTCTCCTaGGAGCACGTTCCCCCTGCTGCTCCTGCTGCATGGCATCAACCT +
Preference number: 1 (lower is better)
Translates to: HCGEGCWAGGLADLS*EHVPPAAPAAWHQP
Trigger: AGGTTGATGCCATGCAGCAGGAGCAGCAGGGGGAACGTGCTCTCAGGAGAGGTCGGCCAACCCTCCAGCCCAACACCCTTCACCACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 90 bp CACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGTGCTCCCATaGCACCACCCGAACGCTCACTACCTGAGAGCAAGGACAGGAGGG +
Preference number: 1 (lower is better)
Translates to: HLATLSLPGGGRVLP*HHPNAHYLRARTGG
Trigger: CCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR GCA 90 bp GGCCAAAGGTATCAGTGGCCAAAAGGGAGACAAAGATCTCCTGGGTaGAGCCTCCTCCACCACTGTGGTGAAGGGTGTTGGGCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: GQRYQWPKGRQRSPG*SLLHHCGEGCWAGG
Trigger: CCCTCCAGCCCAACACCCTTCACCACAGTGGTGGAGGAGGCTGCACCCAGGAGATCTTTGTCTCCCTTTTGGCCACTGATACCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR GCA 90 bp TTGGGCTGGAGGGTTGGCCGACCTCTCCTGAGAGCACGTTCCCCCTaGTGCTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTA +
Preference number: 1 (lower is better)
Translates to: LGWRVGRPLLRARSP*CSCCMASTWVSVTL
Trigger: TAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAGCAGCAGGGGGAACGTGCTCTCAGGAGAGGTCGGCCAACCCTCCAGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 90 bp AGAGGCAATGTGGCCTTCCATTTCCTGAGGTGCCTTGGTTGGCTCTaGATCAGTGGTGGGGACTCAAGAGACAGCCTCCCTGTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: RGNVAFHFLRCLGWL*ISGGDSRDSLPVAS
Trigger: GGAAGCCACAGGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 90 bp GGCACAGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTA +
Preference number: 1 (lower is better)
Translates to: GTAETEHSLGHSFIT*GRESAPMAPPERSL
Trigger: TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp GACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCAGAGACTaGGTGACGCTTCCACACACCAAGGAATGGCAACTGCCAGCAAAG +
Preference number: 1 (lower is better)
Translates to: DTHTARVPCGDEGRD*VTLPHTKEWQLPAK
Trigger: CTTTGCTGGCAGTTGCCATTCCTTGGTGTGTGGAAGCGTCACCCAGTCTCTGCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp AAATCCAGAGGCAATGTGGCCTTCCATTTCCTGAGGTGCCTTGGTTaGCTCTGGATCAGTGGTGGGGACTCAAGAGACAGCCTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: KSRGNVAFHFLRCLG*LWISGGDSRDSLPV
Trigger: CACAGGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCTGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 90 bp TTCCAAATCCAGAGGCAATGTGGCCTTCCATTTCCTGAGGTGCCTTaGTTGGCTCTGGATCAGTGGTGGGGACTCAAGAGACAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: FQIQRQCGLPFPEVP*LALDQWWGLKRQPP
Trigger: GGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCTGGATTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR TCA 90 bp AGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATaGAGGCAGAGACTGGGTGACGCTTCCACACACCAAGGAATGGCA +
Preference number: 1 (lower is better)
Translates to: RFGDRHAHSKSAMWR*RQRLGDASTHQGMA
Trigger: TGCCATTCCTTGGTGTGTGGAAGCGTCACCCAGTCTCTGCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp TGTATCTATCAAGTGTGTTGTCAGGCAAGGTTCTGTTCTGGAGCTTaGCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCA +
Preference number: 1 (lower is better)
Translates to: CIYQVCCQARFCSGA*LTQTGEPLTGGRAP
Trigger: TGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGCCAAGCTCCAGAACAGAACCTTGCCTGACAACACACTTGATAGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp CTGAGAGCACGTTCCCCCTGCTGCTCCTGCTGCATGGCATCAACCTaGGTTTCAGTTACATTACCCAGGAGGATTTCCAAATCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: LRARSPCCSCCMAST*VSVTLPRRISKSRG
Trigger: GCCTCTGGATTTGGAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAGCAGCAGGGGGAACGTGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR GCA 90 bp TTCTTTCCTCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTaGAGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACA +
Preference number: 1 (lower is better)
Translates to: FFPLVQHPPAASQWK*RHPGASGADPSVQT
Trigger: TGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGAGGAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR GCA 90 bp AGGATTTCCAAATCCAGAGGCAATGTGGCCTTCCATTTCCTGAGGTaGCTTGGTTGGCTCTGGATCAGTGGTGGGGACTCAAGAGACAGC +
Preference number: 1 (lower is better)
Translates to: RISKSRGNVAFHFLR*LGWLWISGGDSRDS
Trigger: GCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCTGGATTTGGAAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR GCA 90 bp TTTGTGACGATGCCAAGGGATCAGAGGAACAAAGAGAGAGGATGTTaGTCAGATGGGGGTCTCAACCTCCAGAGCAAGGTGGACACAAAG +
Preference number: 1 (lower is better)
Translates to: FVTMPRDQRNKERGC*SDGGLNLQSKVDTK
Trigger: CTTTGTGTCCACCTTGCTCTGGAGGTTGAGACCCCCATCTGAGCAACATCCTCTCTCTTTGTTCCTCTGATCCCTTGGCATCGTCACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR GCA 90 bp AGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGGGACTTAAGTaGCTTTTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTT +
Preference number: 1 (lower is better)
Translates to: SSTFLDRTDWKKGLK*LLNDDNSASNPQAF
Trigger: AAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp AACTGTCAGGGAATACACTCCTGTTGTTCTAAGCCAGCCAGTGTTTaGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTG +
Preference number: 1 (lower is better)
Translates to: NCQGIHSCCSKPASV*THQHSKLMYLSSVL
Trigger: CAACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCTGGCTTAGAACAACAGGAGTGTATTCCCTGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 90 bp GATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTaGGGTATAAAGACATTATGGGGTAGGTGTGCAACACAAATTAAA +
Preference number: 1 (lower is better)
Translates to: DDNSASNPQAFTKDL*GIKTLWGRCATQIK
Trigger: TTTAATTTGTGTTGCACACCTACCCCATAATGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCAGCACCAGCCAGGGTaGGGCCGCCCCAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLQHQPG*GRPRRR
Trigger: TCTCCGCCTGGGGCGGCCTCACCCTGGCTGGTGCTG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGTGCTCCTGCCTACCTaGTGGCCACGAATCTGGGGC +
Preference number: 2 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSVLLPT*WPRIWG
Trigger: GCCCCAGATTCGTGGCCATCAGGTAGGCAGGAGCAC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACCTTGGATCTGCGGGGTaGTCCTGCCTACCTGATGGC +
Preference number: 2 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDLGSAG*SCLPDG
Trigger: GCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAG...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACTTGGATCTGCGGGGTaGTCCTGCCTACCTGATGGC +
Preference number: 2 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTLGSAG*SCLPDG
Trigger: GCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCACCAGCCCAAAAGGGCTaGCTGATCATCTTGGATCTG +
Preference number: 2 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSPAQKG*LIILDL
Trigger: CAGATCCAAGATGATCAGGCAGCCCTTTTGGGCTGG...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGTGTGCTCTCTATCCTaGGGAAGGTATGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSVCSLS*GRYVLG
Trigger: ACCCAGGACATACCTTCCCCAGGATAGAGAGCACAC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGGAGAGTGCTCCCATaGCACCACCCGAACGCTCAC +
Preference number: 2 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEGRVLP*HHPNAH
Trigger: GTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGCAGCACCAGCCAGGGTaGGGCCGCCCCAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQQHQPG*GRPRRR
Trigger: TCTCCGCCTGGGGCGGCCTCACCCTGGCTGGTGCTG...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGGGGAAGGTATGTCCTaGGTGGGGGCGCTGATCAGT +
Preference number: 2 (lower is better)
Translates to: GGLETDTHTARVPCGDEGGEGMS*VGALIS
Trigger: ACTGATCAGCGCCCCCACCCAGGACATACCTTCCCC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGCCCAAAAGGGCTGCCTaGTCATCTTGGATCTGCGGG +
Preference number: 2 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKPKRAA*SSWICG
Trigger: CCCGCAGATCCAAGATGATCAGGCAGCCCTTTTGGG...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGGAGTATACTGAGGTTTaGCTGGTGACCAGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLEYTEV*LVTRVP
Trigger: CGGCACCCTGGTCACCAGCCAAACCTCAGTATACTC...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAAGGAGAACCCCTCACTaGGGGCAGAGCTCCACATTC +
Preference number: 2 (lower is better)
Translates to: NGNCQQRHEAASPSQLSERRTPH*GQSSTF
Trigger: GAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCT...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTACTGAGGTGCCTTGGTTaGCTCTGGATCAGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVLRCLG*LWISGG
Trigger: CCCACCACTGATCCAGAGCCAACCAAGGCACCTCAG...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CAA 90 bp GCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTaGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGG +
Preference number: 2 (lower is better)
Translates to: AGLPSPHQKAGRKGN*SAFTAIEYDSSMQR
Trigger: CCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTATGGCCTTCCATTTCCTaGGGTGCCTTGGTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVWPSIS*GALVGS
Trigger: AGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCA...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGAAGACGCAGAACACCTaGCATGTCCAACCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: RHPGASGADPSVQTGKEGKTQNT*HVQPGD
Trigger: ATCACCAGGTTGGACATGCCAGGTGTTCTGCGTCTT...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGAAGTGCAGGCATCCTaGAGCTTCAGGAGCAGATCC +
Preference number: 2 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEEVQAS*SFRSRS
Trigger: GGATCTGCTCCTGAAGCTCCAGGATGCCTGCACTTC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCCATCAGTCCCACCCTaGCTTCTTCTTTCCTCTAGT +
Preference number: 2 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLPSVPP*LLLSSS
Trigger: ACTAGAGGAAAGAAGAAGGCAGGGTGGGACTGATGG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCCCAGCCCAAAAGGGCTaGCTGATCATCTTGGATCTG +
Preference number: 2 (lower is better)
Translates to: GGLETDTHTARVPCGDEGPAQKG*LIILDL
Trigger: CAGATCCAAGATGATCAGGCAGCCCTTTTGGGCTGG...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAACCAGGGTGCCGCCCTaGCGGGGGATAGCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTTRVPP*RGIAQF
Trigger: AAACTGGGCTATCCCCCGTCAGGGCGGCACCCTGGT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCTTTACTCCCCGAGCTTaGGGAGCATGGGCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: LLLHGINLGFSYITQEDFFTPRA*GAWAKG
Trigger: ACCCTTGGCCCATGCTCCCCAAGCTCGGGGAGTAAA...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR TCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGTGCTCCTGCCTACCTaGTGGCCACGAATCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWVLLPT*WPRIWG
Trigger: GCCCCAGATTCGTGGCCATCAGGTAGGCAGGAGCAC...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTAGATGTGAAAATTACGTaGGTGACAAGGAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVDVKIT*VTRSTR
Trigger: CCTGGTGCTCCTTGTCACTCACGTAATTTTCACATC...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCACAGTGTGCCTGGCCCTaGTCCCCACTGAGCCCATCA +
Preference number: 2 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAQCAWP*SPLSPS
Trigger: TGATGGGCTCAGTGGGGAGCAGGGCCAGGCACACTG...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTTCTGCGGGGTGCTCCTaGCTACCTGATGGCCACGAA +
Preference number: 2 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCSAGCS*LPDGHE
Trigger: TTCGTGGCCATCAGGTAGGCAGGAGCACCCCGCAGA...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTAAGCCAGCCAGTGTTTaGACACACCAGCACTCCAAG +
Preference number: 2 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFKPASV*THQHSK
Trigger: CTTGGAGTGCTGGTGTGTCCAAACACTGGCTGGCTT...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 90 bp GTTTGTGACGATGCCAAGGGATCAGAGGAACAAAGAGAGAGGATGTaGCTCAGATGGGGGTCTCAACCTCCAGAGCAAGGTGGACACAAA +
Preference number: 2 (lower is better)
Translates to: VCDDAKGSEEQRERM*LRWGSQPPEQGGHK
Trigger: TTTGTGTCCACCTTGCTCTGGAGGTTGAGACCCCCATCTGAGCAACATCCTCTCTCTTTGTTCCTCTGATCCCTTGGCATCGTCACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR TCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTCTGAGGTTTGGCTGGTaGCCAGGGTGCCGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLLRFGW*PGCRPD
Trigger: GTCAGGGCGGCACCCTGGTCACCAGCCAAACCTCAG...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCAGTGCCATGTGGAGATaGAGGCAGAGACTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPASAMWR*RQRLGD
Trigger: GTCACCCAGTCTCTGCCTTCATCTCCACATGGCACT...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGACAGGAGGGAGGTGTaGTCTCTATCCTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCDRREV*SLSWGR
Trigger: CCTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCCATCAGTCCCACCCTaGCTTCTTCTTTCCTCTAGT +
Preference number: 2 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFPSVPP*LLLSSS
Trigger: ACTAGAGGAAAGAAGAAGGCAGGGTGGGACTGATGG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCATTTACTCCCCGAGCTTaGGGAGCATGGGCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPFTPRA*GAWAKG
Trigger: ACCCTTGGCCCATGCTCCCCAAGCTCGGGGAGTAAA...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 90 bp GTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTaGTCAGGCAAGGTTCTGTTCTGGAGCTTGGCTCACCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: VWTHQHSKLMYLSSV*SGKVLFWSLAHPDR
Trigger: CCTGTCTGGGTGAGCCAAGCTCCAGAACAGAACCTTGCCTGACAACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 90 bp GTCCCAACCTCTAGTACCTCAGAATGTGACCTTATTGGTAAACGGTaGCTGCGGATACAGATGAGGTTATACTGGAGTCGGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: VPTSSTSECDLIGKR*LRIQMRLYWSRWDG
Trigger: CCCATCCCACCGACTCCAGTATAACCTCATCTGTATCCGCAGCAACCGTTTACCAATAAGGTCACATTCTGAGGTACTAGAGGTTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACGAACGCTCACTACCTaGGAGCAAGGACAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTRTLTT*EQGQEG
Trigger: TCCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGCCCAAAAGGGCTGCCTaGTCATCTTGGATCTGCGGG +
Preference number: 2 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWPKRAA*SSWICG
Trigger: CCCGCAGATCCAAGATGATCAGGCAGCCCTTTTGGG...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGGAAGGCACCAACTCTaGGGACACCCTGATCTTGGA +
Preference number: 2 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCGRHQL*GHPDLG
Trigger: TCCAAGATCAGGGTGTCCTCAGAGTTGGTGCCTTCC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTACCTTTGATGGAATTGTaGGCAAGCTCACTCAAGTTT +
Preference number: 2 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVPLMEL*ASSLKF
Trigger: AAACTTGAGTGAGCTTGCTCACAATTCCATCAAAGG...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGACAGGAGGGAGGTGTaGTCTCTATCCTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SQCLDTPALQANVSIKCVDRREV*SLSWGR
Trigger: CCTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGCACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQHSFIT*GRESAP
Trigger: GGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTG...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGCACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: IPHVYLESWAECCPFQIPHSFIT*GRESAP
Trigger: GGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTG...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAAGAAGGGACTTAAGTaGCTTTTAAACGATGACAAC +
Preference number: 2 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLKKGLK*LLNDDN
Trigger: GTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTT...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCTCCTGGGCATGCAGATaGATCTACACAGAAACAGCA +
Preference number: 2 (lower is better)
Translates to: LLLHGINLGFSYITQEDFSWACR*IYTETA
Trigger: TGCTGTTTCTGTGTAGATGCATCTGCATGCCCAGGA...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTGGGGAAGGTATGTCCTaGGTGGGGGCGCTGATCAGT +
Preference number: 2 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLGEGMS*VGALIS
Trigger: ACTGATCAGCGCCCCCACCCAGGACATACCTTCCCC...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGTGTGCTCTCTATCCTaGGGAAGGTATGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCVCSLS*GRYVLG
Trigger: ACCCAGGACATACCTTCCCCAGGATAGAGAGCACAC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGAGTATACTGAGGTTTaGCTGGTGACCAGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWEYTEV*LVTRVP
Trigger: CGGCACCCTGGTCACCAGCCAAACCTCAGTATACTC...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACCAGCAGCTTCTCAGTaGAAGTGCAGGCATCCTGGA +
Preference number: 2 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTPAASQ*KCRHPG
Trigger: TCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTCCAGCAGCTTCTCAGTaGAAGTGCAGGCATCCTGGA +
Preference number: 2 (lower is better)
Translates to: SQCLDTPALQANVSIKCVPAASQ*KCRHPG
Trigger: TCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGG...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAGATGAAGGCAGAGACTaGGTGACGCTTCCACACACC +
Preference number: 2 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTDEGRD*VTLPHT
Trigger: GGTGTGTGGAAGCGTCACCCAGTCTCTGCCTTCATC...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR TCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTCGAACGCTCACTACCTaGGAGCAAGGACAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLRTLTT*EQGQEG
Trigger: TCCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCG...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTCTCAAGAAGGAGCTCTaGAGACCCCTGCCACAGAGG +
Preference number: 2 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLLKKEL*RPLPQR
Trigger: CCTCTGTGGCAGGGGTCTGCAGAGCTCCTTCTTGAG...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR GCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCAAGGAATGGCAACTaGCAGCAAAGGCATGAAGCC +
Preference number: 2 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTPRNGN*QQRHEA
Trigger: GGCTTCATGCCTTTGCTGGCAGTTGCCATTCCTTGG...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGGTATAAAGACATTATaGGGTAGGTGTGCAACACAA +
Preference number: 2 (lower is better)
Translates to: LRATERILSTGRSTQVGGGIKTL*GRCATQ
Trigger: TTGTGTTGCACACCTACCCCATAATGTCTTTATACC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCAACAGAACACTCACTTaGCCACTCTTTCATTACCTG +
Preference number: 2 (lower is better)
Translates to: LLLHGINLGFSYITQEDFNRTLT*PLFHYL
Trigger: CAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTT...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGAAGACGCAGAACACCTaGCATGTCCAACCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWKTQNT*HVQPGD
Trigger: ATCACCAGGTTGGACATGCCAGGTGTTCTGCGTCTT...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 90 bp TATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTaGAAGTCCCAACCTCTAGTACCTCAGAATGTGACCTTATTGGTA +
Preference number: 2 (lower is better)
Translates to: YLESWAECCPFQIPM*KSQPLVPQNVTLLV
Trigger: TACCAATAAGGTCACATTCTGAGGTACTAGAGGTTGGGACTTCAACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTTACAAAATACCCGTCTaGTTTGACTTGCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFYKIPV*FDLQIK
Trigger: TTTAATCTGCAAGTCAAACCAGACGGGTATTTTGTA...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAAACAGAACACTCACTTaGCCACTCTTTCATTACCTG +
Preference number: 2 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTNRTLT*PLFHYL
Trigger: CAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCTTTACCAAGGATCTTTaGGGTATAAAGACATTATGG +
Preference number: 2 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAFTKDL*GIKTLW
Trigger: CCATAATGTCTTTATACCCCAAAGATCCTTGGTAAA...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 90 bp CCTCAACCGTTTATTTTGTGTTCAAAGTATAACCAAATGATTTTATaGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAAC +
Preference number: 2 (lower is better)
Translates to: PQPFILCSKYNQMIL*HLLLLGMQMHLHRN
Trigger: GTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATCATTTGGTTATACTTTGAACACAAAATAAACGGTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTTTTACCAAGGATCTTTaGGGTATAAAGACATTATGG +
Preference number: 2 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLFTKDL*GIKTLW
Trigger: CCATAATGTCTTTATACCCCAAAGATCCTTGGTAAA...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR TCA 72 bp GAAGGGTGTTGGGCTGGAGGGTTGGCCGACCTCTCCTaGGAGCACGTTCCCCCTGCTGCTCCTGCTGCATGG +
Preference number: 3 (lower is better)
Translates to: EGCWAGGLADLS*EHVPPAAPAAW
Trigger: CCATGCAGCAGGAGCAGCAGGGGGAACGTGCTCTCAGGAGAGGTCGGCCAACCCTCCAGCCCAACACCCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 72 bp GGGAGGTGTGCTCTCTATCCTGGGGAAGGTATGTCCTaGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GRCALYPGEGMS*VGALISTKVRG
Trigger: CCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCCCCAGGATAGAGAGCACACCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp GTTGCTCAGATGGGGGTCTCAACCTCCAGAGCAAGGTaGACACAAAGCTCCAGCCAGCTGCCCAGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: VAQMGVSTSRAR*TQSSSQLPSPW
Trigger: CCAGGGGCTGGGCAGCTGGCTGGAGCTTTGTGTCCACCTTGCTCTGGAGGTTGAGACCCCCATCTGAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR TCA 72 bp TGCCTACCTGATGGCCACGAATCTGGGGCTCAGACATaGCATGTCTGGCTCAGTGTGCCTGGCCCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: CLPDGHESGAQT*HVWLSVPGPAP
Trigger: GGGAGCAGGGCCAGGCACACTGAGCCAGACATGTCATGTCTGAGCCCCAGATTCGTGGCCATCAGGTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR GCA 72 bp GGGCTGCCTGATCATCTTGGATCTGCGGGGTGCTCCTaGCTACCTGATGGCCACGAATCTGGGGCTCAGACA +
Preference number: 3 (lower is better)
Translates to: GLPDHLGSAGCS*LPDGHESGAQT
Trigger: TGTCTGAGCCCCAGATTCGTGGCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp GAGAGCAAGGACAGGAGGGAGGTGTGCTCTCTATCCTaGGGAAGGTATGTCCTGGGTGGGGGCGCTGATCAG +
Preference number: 3 (lower is better)
Translates to: ESKDRREVCSLS*GRYVLGGGADQ
Trigger: CTGATCAGCGCCCCCACCCAGGACATACCTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTCCTTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGGCTGCCTGATCATCTaGGATCTGCGGGGTGCTCCT +
Preference number: 3 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTGCLII*DLRGAP
Trigger: AGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR TCA 72 bp CGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTaGGGACACCCTGATCTTGGACGTGCACCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: RFSLTALGRHQL*GHPDLGRAPPR
Trigger: TCTGGGAGGTGCACGTCCAAGATCAGGGTGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGGCTGCCTGATCATCTaGGATCTGCGGGGTGCTCCT +
Preference number: 3 (lower is better)
Translates to: GGLETDTHTARVPCGDEGGCLII*DLRGAP
Trigger: AGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp ACTCTTTCATTACCTGGGGGAGGGAGAGTGCTCCCATaGCACCACCCGAACGCTCACTACCTGAGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: TLSLPGGGRVLP*HHPNAHYLRAR
Trigger: CCTTGCTCTCAGGTAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp CAAGTGTGTTGTCAGGCAAGGTTCTGTTCTGGAGCTTaGCTCACCCAGACAGGAGAACCCCTCACTGGGGGC +
Preference number: 3 (lower is better)
Translates to: QVCCQARFCSGA*LTQTGEPLTGG
Trigger: GCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGCCAAGCTCCAGAACAGAACCTTGCCTGACAACACACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp TTTCCTGAGGTGCCTTGGTTGGCTCTGGATCAGTGGTaGGGACTCAAGAGACAGCCTCCCTGTGGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: FPEVPWLALDQW*GLKRQPPCGFQ
Trigger: CTGGAAGCCACAGGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 72 bp CCATTTCCTGAGGTGCCTTGGTTGGCTCTGGATCAGTaGTGGGGACTCAAGAGACAGCCTCCCTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: PFPEVPWLALDQ*WGLKRQPPCGF
Trigger: GAAGCCACAGGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 72 bp GTGGCCTTCCATTTCCTGAGGTGCCTTGGTTGGCTCTaGATCAGTGGTGGGGACTCAAGAGACAGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: VAFHFLRCLGWL*ISGGDSRDSLP
Trigger: AGGGAGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 72 bp GGCAATGTGGCCTTCCATTTCCTGAGGTGCCTTGGTTaGCTCTGGATCAGTGGTGGGGACTCAAGAGACAGC +
Preference number: 3 (lower is better)
Translates to: GNVAFHFLRCLG*LWISGGDSRDS
Trigger: GCTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CCA 72 bp GAAACAGAACACTCACTTGGCCACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAA +
Preference number: 3 (lower is better)
Translates to: ETEHSLGHSFIT*GRESAPMAPPE
Trigger: TTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp CAGAGGCAATGTGGCCTTCCATTTCCTGAGGTGCCTTaGTTGGCTCTGGATCAGTGGTGGGGACTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: QRQCGLPFPEVP*LALDQWWGLKR
Trigger: TCTCTTGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR GCA 72 bp AAATCCAGAGGCAATGTGGCCTTCCATTTCCTGAGGTaGCTTGGTTGGCTCTGGATCAGTGGTGGGGACTCA +
Preference number: 3 (lower is better)
Translates to: KSRGNVAFHFLR*LGWLWISGGDS
Trigger: TGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCACATTGCCTCTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR-3UTR CAA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCATTTCAAATTCCGATGTaGAAGTCCCAACCTCTAGTA +
Preference number: 3 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSFQIPM*KSQPLV
Trigger: TACTAGAGGTTGGGACTTCAACATCGGAATTTGAAA...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAAAACAGAACACTCACTaGGCCACTCTTTCATTACCT +
Preference number: 3 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTKQNTH*ATLSLP
Trigger: AGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTT...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCTATCTATCAAGTGTGTaGTCAGGCAAGGTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: GGLETDTHTARVPCGDEGYLSSV*SGKVLF
Trigger: GAACAGAACCTTGCCTGACAACACACTTGATAGATA...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAGAGGACACCCTGATCTaGGACGTGCACCTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTEDTLI*DVHLPE
Trigger: TTCTGGGAGGTGCACGTCCAAGATCAGGGTGTCCTC...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR TCA 72 bp TCCCTAGTGATTGGCCCCCAGGAAAATCAACAGGTATaGCGACTGTTTCCAAACCTCAAGAAGGAGCTCTGC +
Preference number: 3 (lower is better)
Translates to: SLVIGPQENQQV*RLFPNLKKELC
Trigger: GCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCTGGGGGCCAATCACTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp TCCGATATGACTGGTGTCCTTAAACAAAGGGAGGTTTaGAGACAGACACGCACACAGCAAGAGTGCCATGTG +
Preference number: 3 (lower is better)
Translates to: SDMTGVLKQREV*RQTRTQQECHV
Trigger: CACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCCCTTTGTTTAAGGACACCAGTCATATCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCCCGTCTGGTTTGACTaGCAGATTAAATCACTGCTA +
Preference number: 3 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFPVWFD*QIKSLL
Trigger: TAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR TCA 72 bp TATACTGGAGTCGGTGGGATGGGCTCTAATCCGATATaGCTGGTGTCCTTAAACAAAGGGAGGTTTGGAGAC +
Preference number: 3 (lower is better)
Translates to: YTGVGGMGSNPI*LVSLNKGRFGD
Trigger: GTCTCCAAACCTCCCTTTGTTTAAGGACACCAGTCATATCGGATTAGAGCCCATCCCACCGACTCCAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp TGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTaGAAGAAGGGACTTAAGTGCCTTTTAAACGATGAC +
Preference number: 3 (lower is better)
Translates to: WGQSSTFLDRTD*KKGLKCLLNDD
Trigger: GTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR GCA 72 bp AGCATACCTCACGTTTATCTGGAGTCATGGGCTGAATaGTGTCCCTTTCAAATTCCGATGTTGAAGTCCCAA +
Preference number: 3 (lower is better)
Translates to: SIPHVYLESWAE*CPFQIPMLKSQ
Trigger: TTGGGACTTCAACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp TCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTaGGGTATAAAGACATTATGGGGTAGGTGTGCAACA +
Preference number: 3 (lower is better)
Translates to: SASNPQAFTKDL*GIKTLWGRCAT
Trigger: TGTTGCACACCTACCCCATAATGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CCA 72 bp GGAATACACTCCTGTTGTTCTAAGCCAGCCAGTGTTTaGACACACCAGCACTCCAAGCTAATGTATCTATCA +
Preference number: 3 (lower is better)
Translates to: GIHSCCSKPASV*THQHSKLMYLS
Trigger: TGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCTGGCTTAGAACAACAGGAGTGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR-3UTR CAA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAAAACAGAACACTCACTaGGCCACTCTTTCATTACCT +
Preference number: 3 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTKQNTH*ATLSLP
Trigger: AGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCACCGCCCGCACCTTCCTaGGCGCTGGGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSPPAPS*ALGSGL
Trigger: CAGCCCAGAGCCCAGCGCTCAGGAAGGTGCGGGCGG...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGCAGCACCAGCCAGGGTaGGGCCGCCCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGQHQPG*GRPRRR
Trigger: TCTCCGCCTGGGGCGGCCTCACCCTGGCTGGTGCTG...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGCCGGGCGTACTCGCTaGGGCGGGGTCTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEAGRTR*GGVSAG
Trigger: GCCTGCGGAGACCCCGCCTCAGCGAGTACGCCCGGC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAACTCCGGCCTCGGTGCTaGTCCGGTGGGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSELRPRC*SGGRRG
Trigger: TCCCCGCCTCCCACCGGAGCAGCACCGAGGCCGGAG...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGCACCTTCCTGAGCGCTaGGCTCTGGGCTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGHLPER*ALGWEA
Trigger: CGCCTCCCAGCCCAGAGCCCAGCGCTCAGGAAGGTG...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACCCCGCTGAGCTGGCTTaGTGGTCTGCTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDPAELA*WSAWEP
Trigger: GGGCTCCCAAGCAGACCACCAAGCCAGCTCAGCGGG...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCACTCTTCTCCACCGGCTaGAGTCTGTCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSLFSTG*SLSGCR
Trigger: CCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAG...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCGGTGCCGAGCCAGGTaGTCGTGCCGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLRCRAR*SCRWKA
Trigger: GGCCTTCCAGCGGCACGACCACCTGGCTCGGCACCG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAACCAGGGTGCCGCCCTaGCGGGGGATAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLTRVPP*RGIAQF
Trigger: AAACTGGGCTATCCCCCGTCAGGGCGGCACCCTGGT...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACGCTGGCTTGGTGGTCTaGTTGGGAGCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDAGLVV*LGAPGT
Trigger: AGTGCCTGGGGCTCCCAAGCAGACCACCAAGCCAGC...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCACTGCGGCTCCGCAGATaGCGGATGAAGTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSLRLRR*RMKLTL
Trigger: GAGGGTCAACTTCATCCGGCATCTGCGGAGCCGCAG...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGCTTCTCCTGCTCCCTaGGGCTCCGCAGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTASPAP*GSADAG
Trigger: TCCGGCATCTGCGGAGCCGCAGGGAGCAGGAGAAGC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTCGTGCGGCTTCTCCTaGTCCCTGCGGCTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGSCGFS*SLRLRR
Trigger: TCTGCGGAGCCGCAGGGAGCAGGAGAAGCCGCACGA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACTGGAGTCTGTCCGGCTaGAGGTGTATCCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDWSLSG*RCIRRW
Trigger: CCACCGGCGGATACACCTGCAGCCGGACAGACTCCA...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACGAGCCAGGTGGTCGTaGCGCTGGAAGGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTRARWS*RWKAFP
Trigger: TGGGAAGGCCTTCCAGCGGCACGACCACCTGGCTCG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGGAACGGCGCTTCATGTaGAGGCGCTCGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGERRFM*RRSWRR
Trigger: CCTCCGCCACGAGCGCCTGCACATGAAGCGCCGTTC...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGCACGTTCCCCCTGCTaGTCCTGCTGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSARSPC*SCCMAS
Trigger: TGATGCCATGCAGCAGGAGCAGCAGGGGGAACGTGC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACGCAGGCCTGGAACTCTaGCACCTGCAGCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDAGLEL*HLQLLT
Trigger: CGTGAGGAGCTGCAGGTGCCAGAGTTCCAGGCCTGC...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGCACCACCGTCTGTaGGCAGGCCTGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDRHHRL*AGLELW
Trigger: CCAGAGTTCCAGGCCTGCCCACAGACGGTGGTGCCT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAAGGTGTATCCGCCGGTaGGAGAGCAGGTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAARCIRR*ESRWEF
Trigger: GAACTCCCACCTGCTCTCCCACCGGCGGATACACCT...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACACGCAGTACCGGCACTaGAAGGGCCGGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDTQYRH*KGRALS
Trigger: GGACAAAGCCCGGCCCTTCCAGTGCCGGTACTGCGT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGCTGGCTCAGTGTGCCTaGCCCTGCTCCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGLAQCA*PCSPLS
Trigger: GCTCAGTGGGGAGCAGGGCCAGGCACACTGAGCCAG...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 72 bp CCACAGAGGCCAGCCCAAAAGGGCTGCCTGATCATCTaGGATCTGCGGGGTGCTCCTGCCTACCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: PQRPAQKGCLII*DLRGAPAYLMA
Trigger: GGCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCCCTTTTGGGCTGGCCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACGGTCTTCACAGTGCTTaGGCCACTGCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDGLHSA*ATARVS
Trigger: GGAGACCCTGGCAGTGGCTCAAGCACTGTGAAGACC...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGTCCTCGCTGTCGCTaGACAGCTCCCCGCACACCG +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEGPRCR*TAPRTP
Trigger: CGGTGTGCGGGGAGCTGTTCAGCGACAGCGAGGACC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGCTTTGTCCTTCAGGTaGAAGTGGCTGCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSALSFR*KWLRCR
Trigger: TCGGCACCGCAGCCACTTTCACCTGAAGGACAAAGC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCTGAGGTTTGGCTGGTaGCCAGGGTGCCGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLLRFGW*PGCRPD
Trigger: GTCAGGGCGGCACCCTGGTCACCAGCCAAACCTCAG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCACCCAAAAGGGCTGCCTaGTCATCTTGGATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAPKRAA*SSWICG
Trigger: CCCGCAGATCCAAGATGATCAGGCAGCCCTTTTGGG...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCAGTGCTTGAGCCACTaGCAGGGTCTCCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLQCLSH*QGLPGS
Trigger: GGAGCCCGGGAGACCCTGGCAGTGGCTCAAGCACTG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACCTAGAGATCGCGGGTTaGCGCCAGCTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDLEIAG*RQLGRC
Trigger: ACACCTACCCAGCTGGCGGCAACCCGCGATCTCTAG...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGTGCAGTACGGGCCATaGTGGGAGTCCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLVQYGP*WESSSP
Trigger: TGGGGACGAGGACTCCCAGCATGGCCCGTACTGCAC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTCCTCGGATGCCGCCTaGTCTCTCTTCTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGSSDAA*SLFSTG
Trigger: GCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGTCCGCGTCCTCGGATaGCGCCTGCTCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLVRVLG*RLLSLL
Trigger: GAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGAC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCCAGCTCCAGCTGGCCTaGCCAGCCCCCATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSQLQLA*PAPIRR
Trigger: CCTTCTGATGGGGGCTGGGCAGGCCAGCTGGAGCTG...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACGTGGCTGGGTCCTCCTaGAGAGATCCGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDVAGSS*RDPRWA
Trigger: TGCCCATCTCGGATCTCTCCAGGAGGACCCAGCCAC...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACTGGGAAGCTCCCCCTaGGGGCTAGGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTLGSSP*GLGFSP
Trigger: TGGAGAGAACCCTAGCCCCCAGGGGGAGCTTCCCAG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGCTGAGCTGGCTTGGTaGTCTGCTTGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTAELAW*SAWEPQ
Trigger: CTGGGGCTCCCAAGCAGACCACCAAGCCAGCTCAGC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCCCGCTGAGCTGGCTTaGTGGTCTGCTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLPAELA*WSAWEP
Trigger: GGGCTCCCAAGCAGACCACCAAGCCAGCTCAGCGGG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGCAGGCCTGGAACTCTaGCACCTGCAGCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTAGLEL*HLQLLT
Trigger: CGTGAGGAGCTGCAGGTGCCAGAGTTCCAGGCCTGC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTACAGTACGGGCCATGCTaGGAGTCCTCGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLQYGPC*ESSSPE
Trigger: CTCTGGGGACGAGGACTCCCAGCATGGCCCGTACTG...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGTGTATCCGCCGGTaGGAGAGCAGGTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDRCIRR*ESRWEF
Trigger: GAACTCCCACCTGCTCTCCCACCGGCGGATACACCT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGGTTGGGCTGGAGGGTTaGCCGACCTCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGVGLEG*PTSPES
Trigger: GCTCTCAGGAGAGGTCGGCCAACCCTCCAGCCCAAC...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGAACTGGGTCCCCGCTaGGCTGGCTTGGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEELGPR*AGLVVC
Trigger: GCAGACCACCAAGCCAGCTCAGCGGGGACCCAGTTC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACCGAACGCTCACTACCTaGGAGCAAGGACAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDRTLTT*EQGQEG
Trigger: TCCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCG...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGGAAGGCACCAACTCTaGGGACACCCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSGRHQL*GHPDLG
Trigger: TCCAAGATCAGGGTGTCCTCAGAGTTGGTGCCTTCC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGGCTCTACCGGCAGCTaGTCCTGCTCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSGSTGS*SCSWSR
Trigger: TCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGCGGGGAGGCTGCGCTaGTTCTCTGTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFAGRLR*FSVGLP
Trigger: GGGGAGCCCCACAGAGAAGCAGCGCAGCCTCCCCGC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACTGCGGCTCCGCAGATaGCGGATGAAGTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTLRLRR*RMKLTL
Trigger: GAGGGTCAACTTCATCCGGCATCTGCGGAGCCGCAG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGTCCGCGTCCTCGGATaGCGCCTGCTCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSVRVLG*RLLSLL
Trigger: GAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGAC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTCAGGTGAAAGTGGCTaGGGTGCCGAGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGSGESG*GAEPGG
Trigger: ACCACCTGGCTCGGCACCGCAGCCACTTTCACCTGA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGAACGGCGCTTCATGTaGAGGCGCTCGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEERRFM*RRSWRR
Trigger: CCTCCGCCACGAGCGCCTGCACATGAAGCGCCGTTC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGCAGCTCCAGCTGGCCTaGCCAGCCCCCATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKQLQLA*PAPIRR
Trigger: CCTTCTGATGGGGGCTGGGCAGGCCAGCTGGAGCTG...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGAGAGCACGTTCCCCCTaGTGCTCCTGCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGRARSP*CSCCMA
Trigger: TGCCATGCAGCAGGAGCAGCAGGGGGAACGTGCTCT...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGCAGAAGACGACCCTTaGGTGGCTGGGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSAEDDP*VAGSSW
Trigger: CCAGGAGGACCCAGCCACCCAAGGGTCGTCTTCTGC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAACTGTGCCAGGGTTATaGGCTGGGCATCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSTVPGL*AGHPGS
Trigger: AGAACCAGGATGCCCAGCCCATAACCCTGGCACAGT...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCACACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSHSFIT*GRESAP
Trigger: GGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTG...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAGAGTATACTGAGGTTTaGCTGGTGACCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAEYTEV*LVTRVP
Trigger: CGGCACCCTGGTCACCAGCCAAACCTCAGTATACTC...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGAAGTGCAGGCATCCTaGAGCTTCAGGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSEVQAS*SFRSRS
Trigger: GGATCTGCTCCTGAAGCTCCAGGATGCCTGCACTTC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTGTGGTGAAGGGTGTTaGGCTGGAGGGTTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGCGEGC*AGGLAD
Trigger: GTCGGCCAACCCTCCAGCCCAACACCCTTCACCACA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGTCGTTTGGAGGCATTaGGACCCCGTAATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLVVWRH*DPVILP
Trigger: GGGGAGGATTACGGGGTCTCAATGCCTCCAAACGAC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGGTCCTCGCTGTCGCTaGACAGCTCCCCGCACACCG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFGPRCR*TAPRTP
Trigger: CGGTGTGCGGGGAGCTGTTCAGCGACAGCGAGGACC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGTGCTCCTGCCTACCTaGTGGCCACGAATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEVLLPT*WPRIWG
Trigger: GCCCCAGATTCGTGGCCATCAGGTAGGCAGGAGCAC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCTTGGCCGACCTCTCCTaGGAGCACGTTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGLADLS*EHVPPA
Trigger: AGCAGGGGGAACGTGCTCTCAGGAGAGGTCGGCCAA...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGTCCCCAGCTCTTCTGTaGAGTACGGGCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLSPALL*STGHAG
Trigger: CCCAGCATGGCCCGTACTGCACAGAAGAGCTGGGGA...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGGACTTCTTGGAGGTCTaGACCTCGCCTCCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKDFLEV*TSPPAS
Trigger: CGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGTC...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGCGAGCCAGGTGGTCGTaGCGCTGGAAGGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGRARWS*RWKAFP
Trigger: TGGGAAGGCCTTCCAGCGGCACGACCACCTGGCTCG...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGGACAGGAGGGAGGTGTaGTCTCTATCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGDRREV*SLSWGR
Trigger: CCTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTC...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGCTGAGCTGGCTTGGTaGTCTGCTTGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGAELAW*SAWEPQ
Trigger: CTGGGGCTCCCAAGCAGACCACCAAGCCAGCTCAGC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGAGCATCTTGCAGAACTaGGTCCCCGCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGSILQN*VPAELA
Trigger: AGCCAGCTCAGCGGGGACCCAGTTCTGCAAGATGCT...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGGTCTGTGGGCAGGCCTaGAACTCTGGCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKVCGQA*NSGTCS
Trigger: GCTGCAGGTGCCAGAGTTCCAGGCCTGCCCACAGAC...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCCAGTACGGGCCATGCTaGGAGTCCTCGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGQYGPC*ESSSPE
Trigger: CTCTGGGGACGAGGACTCCCAGCATGGCCCGTACTG...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCACCACACTCACAGCACTaGAAGCTCAGTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAPHSQH*KLSLAL
Trigger: CAAGGCCAAACTGAGCTTCCAGTGCTGTGAGTGTGG...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCCGGTGCCGAGCCAGGTaGTCGTGCCGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFRCRAR*SCRWKA
Trigger: GGCCTTCCAGCGGCACGACCACCTGGCTCGGCACCG...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGACGCAGTACCGGCACTaGAAGGGCCGGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKTQYRH*KGRALS
Trigger: GGACAAAGCCCGGCCCTTCCAGTGCCGGTACTGCGT...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACGATGAAGGCAGAGACTaGGTGACGCTTCCACACACC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDDEGRD*VTLPHT
Trigger: GGTGTGTGGAAGCGTCACCCAGTCTCTGCCTTCATC...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTGGCCTTCCATTTCCTaGGGTGCCTTGGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGWPSIS*GALVGS
Trigger: AGAGCCAACCAAGGCACCTCAGGAAATGGAAGGCCA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTCTCCGGCCTCGGTGCTaGTCCGGTGGGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCLRPRC*SGGRRG
Trigger: TCCCCGCCTCCCACCGGAGCAGCACCGAGGCCGGAG...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGACAGGAGGGAGGTGTaGTCTCTATCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSDRREV*SLSWGR
Trigger: CCTTCCCCAGGATAGAGAGCACACCTCCCTCCTGTC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGTCTGCGGGGTGCTCCTaGCTACCTGATGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKSAGCS*LPDGHE
Trigger: TTCGTGGCCATCAGGTAGGCAGGAGCACCCCGCAGA...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCATTCCATTTCCTGAGGTaGCTTGGTTGGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSFHFLR*LGWLWI
Trigger: GATCCAGAGCCAACCAAGGCACCTCAGGAAATGGAA...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCCCCTGCTGCTCCTGCTaGATGGCATCAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSPCCSC*MASTWV
Trigger: AACCCAGGTTGATGCCATGCAGCAGGAGCAGCAGGG...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACAAAGATCTCCTGGGTaGAGCCTCCTCCACCACTGT +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTQRSPG*SLLHHC
Trigger: ACAGTGGTGGAGGAGGCTGCACCCAGGAGATCTTTG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTAAAGCTCCAGCCAGCTaGCCAGCCCCTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFKAPAS*PAPGVG
Trigger: TCCCACCCCAGGGGCTGGGCAGCTGGCTGGAGCTTT...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTATGGAGCTCACAGCCTaGAGCTCCCTCCCGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFMELTA*SSLPAS
Trigger: GGACGCCGGGAGGGAGCTCCAGGCTGTGAGCTCCAT...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAATGGGCTGGGCATCCTaGTTCTTTGCAAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTMGWAS*FFARSL
Trigger: CAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCAT...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAAATCATGTCCTTGAATaGAGAAACCCGACTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAANHVLE*RNPTRG
Trigger: CCCCCGAGTCGGGTTTCTCCATTCAAGGACATGATT...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGTGGGAGAGATCTGGCTaGGCAGCTAGGTCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGWERSG*AARSFG
Trigger: TCCAAACGACCTAGCTGCCCAGCCAGATCTCTCCCA...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGTCTGTGGGCAGGCCTaGAACTCTGGCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGVCGQA*NSGTCS
Trigger: GCTGCAGGTGCCAGAGTTCCAGGCCTGCCCACAGAC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAACGGGTTGCCGCCAGCTaGGTAGGTGTTTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSERVAAS*VGVLRH
Trigger: GTGCCTCAAAACACCTACCCAGCTGGCGGCAACCCG...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGCGGTGGGAGAGCAGGTaGGAGTTCAGGCGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGRWESR*EFRRKL
Trigger: GAGCTTCCGCCTGAACTCCCACCTGCTCTCCCACCG...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGTTCAGAGCCTGCTTaGAACGGCGCTTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDSSEPA*NGASCA
Trigger: TGCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGGTCGTTTGGAGGCATTaGGACCCCGTAATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKVVWRH*DPVILP
Trigger: GGGGAGGATTACGGGGTCTCAATGCCTCCAAACGAC...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGGTGCTCCTGCCTACCTaGTGGCCACGAATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEVLLPT*WPRIWG
Trigger: GCCCCAGATTCGTGGCCATCAGGTAGGCAGGAGCAC...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAGATGTGAAAATTACGTaGGTGACAAGGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAADVKIT*VTRSTR
Trigger: CCTGGTGCTCCTTGTCACTCACGTAATTTTCACATC...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGGCTTGTGCAGTGGCATaGTCTCGGCTTACTGCAACT +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGACAVA*SRLTAT
Trigger: AGTTGCAGTAAGCCGAGATCATGCCACTGCACAAGC...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCACCGCGGCCACAGCCTaGTCTCCGCTCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPATAATA*SPLSGS
Trigger: GGAGCCTGAGAGCGGAGAGCAGGCTGTGGCCGCGGT...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCATCCTGGTTCTTTaGAAGGTCGCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEGILVL*KVAVGL
Trigger: GAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCC...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGGCGGGGAGGCTGCGCTaGTTCTCTGTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQAGRLR*FSVGLP
Trigger: GGGGAGCCCCACAGAGAAGCAGCGCAGCCTCCCCGC...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGTCCTCGGATGCCGCCTaGTCTCTCTTCTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGESSDAA*SLFSTG
Trigger: GCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGA...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGCTTGGATCTGCGGGGTaGTCCTGCCTACCTGATGGC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGLGSAG*SCLPDG
Trigger: GCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAG...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACCAAGGAATGGCAACTaGCAGCAAAGGCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTPRNGN*QQRHEA
Trigger: GGCTTCATGCCTTTGCTGGCAGTTGCCATTCCTTGG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCATACTGCTCCTGGGCATaGAGATGCATCTACACAGAA +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAYCSWA*RCIYTE
Trigger: TTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTA...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGCTTGGTGGTCTGCTTaGGAGCCCCAGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFAWWSA*EPQALC
Trigger: GCACAGTGCCTGGGGCTCCCAAGCAGACCACCAAGC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCGACTCGGGGGTAGCTaGAGGGTGGTCACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFRLGGS*RVVTCC
Trigger: ACAGCAGGTGACCACCCTCCAGCTACCCCCGAGTCG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGTGGGAGAGATCTGGCTaGGCAGCTAGGTCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLWERSG*AARSFG
Trigger: TCCAAACGACCTAGCTGCCCAGCCAGATCTCTCCCA...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAACTGGAAGCTCAGTTTaGCCTTGCCGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLTGSSV*PCRFPA
Trigger: CGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGT...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGTGTGCTCTCTATCCTaGGGAAGGTATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLVCSLS*GRYVLG
Trigger: ACCCAGGACATACCTTCCCCAGGATAGAGAGCACAC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGAAGTGCAGGCATCCTaGAGCTTCAGGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSEVQAS*SFRSRS
Trigger: GGATCTGCTCCTGAAGCTCCAGGATGCCTGCACTTC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCATGCATTTACTGCTCCTaGGCATGCAGATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAACIYCS*ACRCIY
Trigger: GTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCA...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGATTCTCGGGGGTAGCTaGAGGGTGGTCACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKILGGS*RVVTCC
Trigger: ACAGCAGGTGACCACCCTCCAGCTACCCCCGAGAAT...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461277.2
CDS-3UTR TCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGCTTTGTCCTTCAGGTaGAAGTGGCTGCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGALSFR*KWLRCR
Trigger: TCGGCACCGCAGCCACTTTCACCTGAAGGACAAAGC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGCAGCACCAGCCAGGGTaGGGCCGCCCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQQHQPG*GRPRRR
Trigger: TCTCCGCCTGGGGCGGCCTCACCCTGGCTGGTGCTG...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCCAGGCTGGTGTCACTaGGCTAGGCAATCCACCCAC +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFPGWCH*ARQSTH
Trigger: GTGGGTGGATTGCCTAGCTCAGTGACACCAGCCTGG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGTGGAACTCTGGCACCTaGAGCTCCTCACGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLWNSGT*SSSRFL
Trigger: AAGGAAACGTGAGGAGCTGCAGGTGCCAGAGTTCCA...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCTCGTGCGGCTTCTCCTaGTCCCTGCGGCTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPASCGFS*SLRLRR
Trigger: TCTGCGGAGCCGCAGGGAGCAGGAGAAGCCGCACGA...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCAGCTCAGTTTGGCCTTaGCGTTTTCCAGCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSSSVWP*RFPAAL
Trigger: AAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCT...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGTACAGACGGGGTTTTaGCATGTGGCCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGVQTGF*HVAQAG
Trigger: ACCAGCCTGGGCCACATGGCAAAACCCCGTCTGTAC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGCGGCTCGGGGGCAAATaGAGGCGCCTGAAAAACAAT +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKRLGGK*RRLKNN
Trigger: ATTGTTTTTCAGGCGCCTCCATTTGCCCCCGAGCCG...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCTCATTCTCCTCTCCCTaGGAGAGATCTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGSFSSP*ERSGWA
Trigger: TGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGA...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGGAGATCCTGCAACTCTaGAACGCGTGGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLEILQL*NAWLIL
Trigger: GAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTC...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGCATCCTGGAGCTTCAGGAGCAGATCCTAGCGTTCAGACAGGGAAGGAGGGGGAATGGCTGGAGACTTaGAGAGTCCAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RHPGASGADPSVQTGKEGEWLET*RVQVGD
Trigger: GTCTCCTACTTGGACTCTCCAAGTCTCCAGCCATTC...CCCCTCCTTCCCTGTCTGAACGCTAGGATCTGCTCCTGAAGCTCCAGGATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCACACGTAGGACTTCTTaGAGGTCTGCACCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGTRRTS*RSAPRL
Trigger: GAGGCGAGGTGCAGACCTCCAAGAAGTCCTACGTGT...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGCCACACTCACAGCACTaGAAGCTCAGTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLPHSQH*KLSLAL
Trigger: CAAGGCCAAACTGAGCTTCCAGTGCTGTGAGTGTGG...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGGGGGAAGGTATGTCCTaGGTGGGGGCGCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEGEGMS*VGALIS
Trigger: ACTGATCAGCGCCCCCACCCAGGACATACCTTCCCC...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGTTTACTCCCCGAGCTTaGGGAGCATGGGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGFTPRA*GAWAKG
Trigger: ACCCTTGGCCCATGCTCCCCAAGCTCGGGGAGTAAA...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAGTTTATCTGGAGTCATaGGCTGAATGCTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAVYLES*AECCPF
Trigger: AAAGGGACAGCATTCAGCCCATGACTCCAGATAAAC...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTAGCTGCTCCTGCTGCATaGCATCAACCTGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVAAPAA*HQPGFQ
Trigger: CTGAAACCCAGGTTGATGCCATGCAGCAGGAGCAGC...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCCCAAAAGGGCTGCCTaGTCATCTTGGATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFPKRAA*SSWICG
Trigger: CCCGCAGATCCAAGATGATCAGGCAGCCCTTTTGGG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGAAAATCAACAGGTATaGCGACTGTTTCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSENQQV*RLFPNL
Trigger: GAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTATCTGGAGTCATGGGCTaGATGCTGTCCCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLSGVMG*MLSLSN
Trigger: ATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGA...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGGCTGAAACTTGGGTCTaGACCCTGCCTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLAETWV*TLPLME
Trigger: TTCCATCAAAGGCAGGGTTCAGACCCAAGTTTCAGC...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAAGCCCAGAGTTTTCCTaGTGTGAAAATTACGTGAGT +
Preference number: 4 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSSPEFS*CENYVS
Trigger: ACTCACGTAATTTTCACATCAGGAAAACTCTGGGCT...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACAGTGCTTGAGCCACTaGCAGGGTCTCCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPQCLSH*QGLPGS
Trigger: GGAGCCCGGGAGACCCTGGCAGTGGCTCAAGCACTG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGACAGGGTCTTCACAGTaGTTGAGCCACTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGTGSSQ*LSHCQG
Trigger: ACCCTGGCAGTGGCTCAAGCACTGTGAAGACCCTGT...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGACCGGCAGCTGCTCCTaGTCCTGGTCCAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPTGSCS*SWSRGL
Trigger: CAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGT...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGGCTCTACCGGCAGCTaGTCCTGCTCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAGSTGS*SCSWSR
Trigger: TCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCCAGTGTGCCTGGCCCTaGTCCCCACTGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAQCAWP*SPLSPS
Trigger: TGATGGGCTCAGTGGGGAGCAGGGCCAGGCACACTG...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGCCAAGGAATGGCAACTaGCAGCAAAGGCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKPRNGN*QQRHEA
Trigger: GGCTTCATGCCTTTGCTGGCAGTTGCCATTCCTTGG...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAACGCACACAGCAAGAGTaGCATGTGGAGATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSERTQQE*HVEMKA
Trigger: TGCCTTCATCTCCACATGGCACTCTTGCTGTGTGCG...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGCTTACTGCAACTTCTaGCTCCCAGACTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLAYCNF*LPDSSN
Trigger: ATTGCTTGAGTCTGGGAGGCAGAAGTTGCAGTAAGC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCCCGAAAACCCTCCTGTaGCGGCGGAAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAPKTLL*RRKSRA
Trigger: TGCCCTGGACTTCCGCCGCCACAGGAGGGTTTTCGG...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGGCTCCTCATTTTCCTaGGCTCCTCACTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGGSSFS*APHFPS
Trigger: CGAAGGAAAGTGAGGAGCCCAGGAAAATGAGGAGCC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGCCAGGGTTATGGGCTaGGCATCCTGGTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGARVMG*ASWFFA
Trigger: TGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCAGGGTCCCCGCTGAGCTaGCTTGGTGGTCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPGSPLS*LGGLLG
Trigger: CCCAAGCAGACCACCAAGCCAGCTCAGCGGGGACCC...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGCAACTCTGGAACGCGTaGCTCATTCTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGQLWNA*LILLSL
Trigger: CAGGGAGAGGAGAATGAGCCACGCGTTCCAGAGTTG...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGACTGGAAGCTCAGTTTaGCCTTGCCGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKTGSSV*PCRFPA
Trigger: CGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGT...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGGGAGAGTGCTCCCATaGCACCACCCGAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAGRVLP*HHPNAH
Trigger: GTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAAGACGCAGAACACCTaGCATGTCCAACCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLKTQNT*HVQPGD
Trigger: ATCACCAGGTTGGACATGCCAGGTGTTCTGCGTCTT...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTACAGATCCCTAGTGATTaGCCCCCAGGAAAATCAACA +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLQIPSD*PPGKST
Trigger: TGTTGATTTTCCTGGGGGCCAATCACTAGGGATCTG...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCTGAGGTGCCTTGGTTaGCTCTGGATCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFLRCLG*LWISGG
Trigger: CCCACCACTGATCCAGAGCCAACCAAGGCACCTCAG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCAGAACTGGGTCCCCGCTaGGCTGGCTTGGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAELGPR*AGLVVC
Trigger: GCAGACCACCAAGCCAGCTCAGCGGGGACCCAGTTC...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTACCAGGGTGCCGCCCTaGCGGGGGATAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVTRVPP*RGIAQF
Trigger: AAACTGGGCTATCCCCCGTCAGGGCGGCACCCTGGT...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGCTGAGGTTTGGCTGGTaGCCAGGGTGCCGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWLRFGW*PGCRPD
Trigger: GTCAGGGCGGCACCCTGGTCACCAGCCAAACCTCAG...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGTCTGGGGCTCAGACATaGCATGTCTGGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGESGAQT*HVWLSV
Trigger: CACACTGAGCCAGACATGTCATGTCTGAGCCCCAGA...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTTCTGGGGCTCAGACATaGCATGTCTGGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFSGAQT*HVWLSV
Trigger: CACACTGAGCCAGACATGTCATGTCTGAGCCCCAGA...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TGGGGTGGGAGGGAAGGATCGAGGGGTAGCTGTTGTCAGATAAGGCCAAAGGTAGTGCCTTTTAAACGATaGCAACTCCGCTTCCAACCC +
Preference number: 4 (lower is better)
Translates to: WGGREGSRGSCCQIRPKVVPFKR*QLRFQP
Trigger: GGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCAC...TACCTTTGGCCTTATCTGACAACAGCTACCCCTCGATCCTTCCCTCCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGAGTGCCATGTGGAGATaGAGGCAGAGACTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGESAMWR*RQRLGD
Trigger: GTCACCCAGTCTCTGCCTTCATCTCCACATGGCACT...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCTCTGGAGTCATGGGCTaGATGCTGTCCCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSSGVMG*MLSLSN
Trigger: ATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGA...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCTCTGAACCCTGCCTTTaGTGGAATTGTGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSSEPCL*WNCEQA
Trigger: AGCTTGCTCACAATTCCATCAAAGGCAGGGTTCAGA...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGAAAAACAATGGTGTTaGTTTCTCCCCCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGEKQWC*FLPRPH
Trigger: GTGCGGGCGGGGGAGAAAGCAACACCATTGTTTTTC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGGTGCAGTACGGGCCATaGTGGGAGTCCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPVQYGP*WESSSP
Trigger: TGGGGACGAGGACTCCCAGCATGGCCCGTACTGCAC...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGACTTCTTGGAGGTCTaGACCTCGCCTCCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCDFLEV*TSPPAS
Trigger: CGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGTC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACAGCTTCTCCTGCTCCCTaGGGCTCCGCAGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTASPAP*GSADAG
Trigger: TCCGGCATCTGCGGAGCCGCAGGGAGCAGGAGAAGC...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCTACTGCTCCTGGGCATaGAGATGCATCTACACAGAA +
Preference number: 4 (lower is better)
Translates to: SSPTSASSFSVEVQASWSYCSWA*RCIYTE
Trigger: TTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTA...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCAGCTTGGTGGTCTGCTTaGGAGCCCCAGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPAWWSA*EPQALC
Trigger: GCACAGTGCCTGGGGCTCCCAAGCAGACCACCAAGC...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTCAACTCTGGAACGCGTaGCTCATTCTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFQLWNA*LILLSL
Trigger: CAGGGAGAGGAGAATGAGCCACGCGTTCCAGAGTTG...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGCGGTGGGAGAGCAGGTaGGAGTTCAGGCGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPRWESR*EFRRKL
Trigger: GAGCTTCCGCCTGAACTCCCACCTGCTCTCCCACCG...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGGGGAGAGTGCTCCCATaGCACCACCCGAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQGRVLP*HHPNAH
Trigger: GTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCC...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACTGGCTCAGTGTGCCTaGCCCTGCTCCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTLAQCA*PCSPLS
Trigger: GCTCAGTGGGGAGCAGGGCCAGGCACACTGAGCCAG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAGGTATAAAGACATTATaGGGTAGGTGTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAGIKTL*GRCATQ
Trigger: TTGTGTTGCACACCTACCCCATAATGTCTTTATACC...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGGCAAGGTTCTGTTCTaGAGCTTGGCTCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFGKVLF*SLAHPD
Trigger: GTCTGGGTGAGCCAAGCTCCAGAACAGAACCTTGCC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGGCTCTGGATCAGTGGTaGGGACTCAAGAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEALDQW*GLKRQP
Trigger: AGGCTGTCTCTTGAGTCCCCACCACTGATCCAGAGC...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CAA 72 bp CCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTaGTCAGCGTTTACGGCTATTGAGTATGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSPHQKAGRKGN*SAFTAIEYDSS
Trigger: GGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 72 bp GATGCCAAGGGATCAGAGGAACAAAGAGAGAGGATGTaGCTCAGATGGGGGTCTCAACCTCCAGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: DAKGSEEQRERM*LRWGSQPPEQG
Trigger: ACCTTGCTCTGGAGGTTGAGACCCCCATCTGAGCAACATCCTCTCTCTTTGTTCCTCTGATCCCTTGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACACCTTTGATGGAATTGTaGGCAAGCTCACTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTPLMEL*ASSLKF
Trigger: AAACTTGAGTGAGCTTGCTCACAATTCCATCAAAGG...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAATCTGAACCCTGCCTTTaGTGGAATTGTGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: NGNCQQRHEAASPSQLSESEPCL*WNCEQA
Trigger: AGCTTGCTCACAATTCCATCAAAGGCAGGGTTCAGA...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGATGTGAAAATTACGTaGGTGACAAGGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGDVKIT*VTRSTR
Trigger: CCTGGTGCTCCTTGTCACTCACGTAATTTTCACATC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACCAGGCTGGTGTCACTaGGCTAGGCAATCCACCCAC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPPGWCH*ARQSTH
Trigger: GTGGGTGGATTGCCTAGCTCAGTGACACCAGCCTGG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGCTTGTGCAGTGGCATaGTCTCGGCTTACTGCAACT +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFACAVA*SRLTAT
Trigger: AGTTGCAGTAAGCCGAGATCATGCCACTGCACAAGC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCGCACCTGTGGGTTTGTaGCGATGCCAAGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFAPVGL*RCQGIR
Trigger: TCTGATCCCTTGGCATCGTCACAAACCCACAGGTGC...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGGCATCCTGGTTCTTTaGAAGGTCGCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAGILVL*KVAVGL
Trigger: GAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGCTGGCTTGGTGGTCTaGTTGGGAGCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVAGLVV*LGAPGT
Trigger: AGTGCCTGGGGCTCCCAAGCAGACCACCAAGCCAGC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCATGGAGTCTGTCCGGCTaGAGGTGTATCCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAWSLSG*RCIRRW
Trigger: CCACCGGCGGATACACCTGCAGCCGGACAGACTCCA...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTAGCTCAGTTTGGCCTTaGCGTTTTCCAGCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFSSVWP*RFPAAL
Trigger: AAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCT...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTTCAGGTGAAAGTGGCTaGGGTGCCGAGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCSGESG*GAEPGG
Trigger: ACCACCTGGCTCGGCACCGCAGCCACTTTCACCTGA...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGTACAGACGGGGTTTTaGCATGTGGCCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAVQTGF*HVAQAG
Trigger: ACCAGCCTGGGCCACATGGCAAAACCCCGTCTGTAC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGATGATCTCGGCTTACTaGAACTTCTGCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGMISAY*NFCLPD
Trigger: GTCTGGGAGGCAGAAGTTGCAGTAAGCCGAGATCAT...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGTCCCCCTGCTGCTCCTaGTGCATGGCATCAACCTGG +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQSPCCS*CMASTW
Trigger: CCAGGTTGATGCCATGCAGCAGGAGCAGCAGGGGGA...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGTTTGCAAGGTCGCTGTaGGGCTCTACCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPFARSL*GSTGSC
Trigger: GCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAA...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCACTGTGCCAGGGTTATaGGCTGGGCATCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFTVPGL*AGHPGS
Trigger: AGAACCAGGATGCCCAGCCCATAACCCTGGCACAGT...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGGGGTCCCCGCTGAGCTaGCTTGGTGGTCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQGSPLS*LGGLLG
Trigger: CCCAAGCAGACCACCAAGCCAGCTCAGCGGGGACCC...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCCCTCGTCCCCAGAGCTaGAGAGAACGATCTCGATGG +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAPRPQS*RERSRW
Trigger: CCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGG...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCACTCTTCTCCACCGGCTaGAGTCTGTCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSALFSTG*SLSGCR
Trigger: CCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAG...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAAACAGAACACTCACTTaGCCACTCTTTCATTACCTG +
Preference number: 4 (lower is better)
Translates to: FITWGRESAPMAPPERSLNRTLT*PLFHYL
Trigger: CAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTT...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGAAGCCAGCCAGTGTTTaGACACACCAGCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEKPASV*THQHSK
Trigger: CTTGGAGTGCTGGTGTGTCCAAACACTGGCTGGCTT...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGCTTGAGTCAGACGTCTaGAGCAGGAAGGTGAATAAC +
Preference number: 4 (lower is better)
Translates to: LRATERILSTGRSTQVGGLESDV*SRKVNN
Trigger: GTTATTCACCTTCCTGCTTCAGACGTCTGACTCAAG...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTACCGGCAGCTGCTCCTaGTCCTGGTCCAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLTGSCS*SWSRGL
Trigger: CAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGT...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGCTAGAGATCGCGGGTTaGCGCCAGCTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWLEIAG*RQLGRC
Trigger: ACACCTACCCAGCTGGCGGCAACCCGCGATCTCTAG...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACATCCCCAGCTCTTCTGTaGAGTACGGGCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTSPALL*STGHAG
Trigger: CCCAGCATGGCCCGTACTGCACAGAAGAGCTGGGGA...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACATCGTGGCTCTCTAGGTaGCCATCCAGGTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTSWLSR*PSRSSL
Trigger: CAGCGAGGACCTGGATGGGCACCTAGAGAGCCACGA...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCATCGTGGCTCTCTAGGTaGCCATCCAGGTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSASWLSR*PSRSSL
Trigger: CAGCGAGGACCTGGATGGGCACCTAGAGAGCCACGA...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCATCTGCGGGGTGCTCCTaGCTACCTGATGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSASAGCS*LPDGHE
Trigger: TTCGTGGCCATCAGGTAGGCAGGAGCACCCCGCAGA...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTCTTGGATCTGCGGGGTaGTCCTGCCTACCTGATGGC +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVLGSAG*SCLPDG
Trigger: GCCATCAGGTAGGCAGGAGCACCCCGCAGATCCAAG...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCCCAGCCCAAAAGGGCTaGCTGATCATCTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFPAQKG*LIILDL
Trigger: CAGATCCAAGATGATCAGGCAGCCCTTTTGGGCTGG...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGCTCAAGAAGGAGCTCTaGAGACCCCTGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPLKKEL*RPLPQR
Trigger: CCTCTGTGGCAGGGGTCTGCAGAGCTCCTTCTTGAG...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAAGAAGGGACTTAAGTaGCTTTTAAACGATGACAAC +
Preference number: 4 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDKKGLK*LLNDDN
Trigger: GTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTTTTGCAAGGTCGCTGTaGGGCTCTACCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVFARSL*GSTGSC
Trigger: GCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAA...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCGAGATCCTGCAACTCTaGAACGCGTGGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFEILQL*NAWLIL
Trigger: GAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTC...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGTTTCCAGCGGCTCTTTaGGACCCTTGTCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPFPAAL*DPCPRP
Trigger: AGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAA...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAACAGAACACTCACTTaGCCACTCTTTCATTACCTG +
Preference number: 4 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLNRTLT*PLFHYL
Trigger: CAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTT...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGAGGAGAACCCCTCACTaGGGGCAGAGCTCCACATTC +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPRRTPH*GQSSTF
Trigger: GAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCT...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 72 bp CAGGGAGGAAGGGGAATTTGTCAGCGTTTACGGCTATaGAGTATGATTCTTCCATGCAGAGGACACCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGGRGICQRLRL*SMILPCRGHLP
Trigger: GGGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCCCTTCCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACAAGCAGGCCACTATCTTaGAGCTCCGGAGCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTSRPLS*SSGAEV
Trigger: GACTTCGGCTCCGGAGCTTCAAGATAGTGGCCTGCT...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGATAAAATCATGTCCTTaGATGGAGAAACCCGACTCG +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKIKSCP*MEKPDS
Trigger: CGAGTCGGGTTTCTCCATTCAAGGACATGATTTTAT...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTCGAACGCTCACTACCTaGGAGCAAGGACAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVRTLTT*EQGQEG
Trigger: TCCCTCCTGTCCTTGCTCTCAGGTAGTGAGCGTTCG...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGAAAATCAACAGGTATaGCGACTGTTTCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGENQQV*RLFPNL
Trigger: GAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACATGGAGGGTGGTCACCTaGTGTGTGTCCCGCACATTC +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTWRVVT*CVSRTF
Trigger: GAATGTGCGGGACACACAGCAGGTGACCACCCTCCA...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGCCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPPGALL*PGDPAT
Trigger: AGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGG...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACTCAAGAAGGAGCTCTaGAGACCCCTGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTLKKEL*RPLPQR
Trigger: CCTCTGTGGCAGGGGTCTGCAGAGCTCCTTCTTGAG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCCGCACACAGCAAGAGTaGCATGTGGAGATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPARTQQE*HVEMKA
Trigger: TGCCTTCATCTCCACATGGCACTCTTGCTGTGTGCG...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGTCATTCTCCTCTCCCTaGGAGAGATCTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQSFSSP*ERSGWA
Trigger: TGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGA...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGTTCTTCTACCTGGAATaGCTGGAGACTTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEFFYLE*LETWRV
Trigger: GACTCTCCAAGTCTCCAGCCATTCCAGGTAGAAGAA...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTAGGCACCACCGTCTGTaGGCAGGCCTGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLRHHRL*AGLELW
Trigger: CCAGAGTTCCAGGCCTGCCCACAGACGGTGGTGCCT...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGCGGGTTGCCGCCAGCTaGGTAGGTGTTTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQRVAAS*VGVLRH
Trigger: GTGCCTCAAAACACCTACCCAGCTGGCGGCAACCCG...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTCGTCCCCAGAGCTaGAGAGAACGATCTCGATGG +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTPRPQS*RERSRW
Trigger: CCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGG...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGTGTGCTCTCTATCCTaGGGAAGGTATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAVCSLS*GRYVLG
Trigger: ACCCAGGACATACCTTCCCCAGGATAGAGAGCACAC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGGAGTATACTGAGGTTTaGCTGGTGACCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQEYTEV*LVTRVP
Trigger: CGGCACCCTGGTCACCAGCCAAACCTCAGTATACTC...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACCAGCAGCTTCTCAGTaGAAGTGCAGGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPPAASQ*KCRHPG
Trigger: TCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGGCAAGGTTCTGTTCTaGAGCTTGGCTCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCGKVLF*SLAHPD
Trigger: GTCTGGGTGAGCCAAGCTCCAGAACAGAACCTTGCC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGATGAAGGCAGAGACTaGGTGACGCTTCCACACACC +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCDEGRD*VTLPHT
Trigger: GGTGTGTGGAAGCGTCACCCAGTCTCTGCCTTCATC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTAAACAAAGGGAGGTTTaGAGACAGACACGCACACAG +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFKQREV*RQTRTQ
Trigger: CTGTGTGCGTGTCTGTCTCCAAACCTCCCTTTGTTT...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCATGCCTTGGTTGGCTCTaGATCAGTGGTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPCLGWL*ISGGDS
Trigger: TGAGTCCCCACCACTGATCCAGAGCCAACCAAGGCA...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGGCCAAAGGTATCAGTaGCCAAAAGGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFGQRYQ*PKGRQR
Trigger: TCTTTGTCTCCCTTTTGGCCACTGATACCTTTGGCC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp ACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACAGGACAGATTGGAAGAAGATAAAATCATGTCCTTaGATGGAGAAACCCGACTCA +
Preference number: 4 (lower is better)
Translates to: TPHWGQSSTFLDRTDWKKIKSCP*MEKPDS
Trigger: TGAGTCGGGTTTCTCCATTCAAGGACATGATTTTAT...CTTCTTCCAATCTGTCCTGTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461277.2
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGAGAAGGAAAGCATCTTaGAGAACTGGGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPRRKAS*RTGSPL
Trigger: CAGCGGGGACCCAGTTCTGCAAGATGCTTTCCTTCT...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGTGGAGGGTGGTCACCTaGTGTGTGTCCCGCACATTC +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQWRVVT*CVSRTF
Trigger: GAATGTGCGGGACACACAGCAGGTGACCACCCTCCA...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGCCAGCCCAAAAGGGCTaGCTGATCATCTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPPAQKG*LIILDL
Trigger: CAGATCCAAGATGATCAGGCAGCCCTTTTGGGCTGG...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAATGGGCTGGGCATCCTaGTTCTTTGCAAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTMGWAS*FFARSL
Trigger: CAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCAT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCAGGCACTTCTTTGCCCTaGAGATCCTGCAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPGTSLP*RSCNSG
Trigger: TCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCC...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACAACACGTAGGACTTCTTaGAGGTCTGCACCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTTRRTS*RSAPRL
Trigger: GAGGCGAGGTGCAGACCTCCAAGAAGTCCTACGTGT...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCAGCAGCTTCTCAGTaGAAGTGCAGGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTPAASQ*KCRHPG
Trigger: TCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGG...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCAAACAAAGGGAGGTTTaGAGACAGACACGCACACAG +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFKQREV*RQTRTQ
Trigger: CTGTGTGCGTGTCTGTCTCCAAACCTCCCTTTGTTT...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGTTTCCTGAGGTGCCTTaGTTGGCTCTGGATCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPFPEVP*LALDQW
Trigger: CCACTGATCCAGAGCCAACCAAGGCACCTCAGGAAA...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGAGACAAAGATCTCCTaGGTGCAGCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVETKIS*VQPPPP
Trigger: TGGTGGAGGAGGCTGCACCCAGGAGATCTTTGTCTC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTACCTCCAGAGCAAGGTaGACACAAAGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVTSRAR*TQSSSQ
Trigger: CTGGCTGGAGCTTTGTGTCCACCTTGCTCTGGAGGT...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CAA 72 bp CACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTaGTCAGGCAAGGTTCTGTTCTGGAGCTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HQHSKLMYLSSV*SGKVLFWSLAH
Trigger: GTGAGCCAAGCTCCAGAACAGAACCTTGCCTGACAACACACTTGATAGATACATTAGCTTGGAGTGCTGGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTGTGCCTTTTAAACGATaGCAACTCCGCTTCCAACCC +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCVPFKR*QLRFQP
Trigger: GGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCAC...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCAGCTGAAACTTGGGTCTaGACCCTGCCTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPAETWV*TLPLME
Trigger: TTCCATCAAAGGCAGGGTTCAGACCCAAGTTTCAGC...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGAGCCCAGAGTTTTCCTaGTGTGAAAATTACGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGESPEFS*CENYVS
Trigger: ACTCACGTAATTTTCACATCAGGAAAACTCTGGGCT...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTAGAAGGAAAGCATCTTaGAGAACTGGGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVRRKAS*RTGSPL
Trigger: CAGCGGGGACCCAGTTCTGCAAGATGCTTTCCTTCT...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCATGGAACTCTGGCACCTaGAGCTCCTCACGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAWNSGT*SSSRFL
Trigger: AAGGAAACGTGAGGAGCTGCAGGTGCCAGAGTTCCA...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTCCATCAGTCCCACCCTaGCTTCTTCTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCPSVPP*LLLSSS
Trigger: ACTAGAGGAAAGAAGAAGGCAGGGTGGGACTGATGG...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCAATGATCTCGGCTTACTaGAACTTCTGCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPMISAY*NFCLPD
Trigger: GTCTGGGAGGCAGAAGTTGCAGTAAGCCGAGATCAT...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTAGCATCTTGCAGAACTaGGTCCCCGCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLSILQN*VPAELA
Trigger: AGCCAGCTCAGCGGGGACCCAGTTCTGCAAGATGCT...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACAGGCACTTCTTTGCCCTaGAGATCCTGCAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTGTSLP*RSCNSG
Trigger: TCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCC...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGCACTCTTTCATTACCTaGGGGAGGGAGAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQHSFIT*GRESAP
Trigger: GGGAGCACTCTCCCTCCCCCAGGTAATGAAAGAGTG...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGAAGACGCAGAACACCTaGCATGTCCAACCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPKTQNT*HVQPGD
Trigger: ATCACCAGGTTGGACATGCCAGGTGTTCTGCGTCTT...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTTTTACTCCCCGAGCTTaGGGAGCATGGGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLFTPRA*GAWAKG
Trigger: ACCCTTGGCCCATGCTCCCCAAGCTCGGGGAGTAAA...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACATTGGCTCTGGATCAGTaGTGGGGACTCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTLALDQ*WGLKRQ
Trigger: CTGTCTCTTGAGTCCCCACCACTGATCCAGAGCCAA...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCAAGGATGTTGCTCAGATaGGGGTCTCAACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSARMLLR*GSQPPE
Trigger: CTCTGGAGGTTGAGACCCCCATCTGAGCAACATCCT...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGAATCATGTCCTTGAATaGAGAAACCCGACTCACGTA +
Preference number: 4 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGENHVLE*RNPTHV
Trigger: TACGTGAGTCGGGTTTCTCCATTCAAGGACATGATT...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461277.2
CDS-3UTR TCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTGGAAGGCACCAACTCTaGGGACACCCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLGRHQL*GHPDLG
Trigger: TCCAAGATCAGGGTGTCCTCAGAGTTGGTGCCTTCC...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTCCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLPGALL*PGDPAT
Trigger: AGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGG...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACCATCAGTCCCACCCTaGCTTCTTCTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTPSVPP*LLLSSS
Trigger: ACTAGAGGAAAGAAGAAGGCAGGGTGGGACTGATGG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGTCCTGGGCATGCAGATaGATCTACACAGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQSWACR*IYTETA
Trigger: TGCTGTTTCTGTGTAGATGCATCTGCATGCCCAGGA...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTGCCAGGGTTATGGGCTaGGCATCCTGGTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLARVMG*ASWFFA
Trigger: TGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGC...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCAGAATGGCTGGAGACTTaGAGAGTCCAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAEWLET*RVQVGD
Trigger: GTCTCCTACTTGGACTCTCCAAGTCTCCAGCCATTC...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGTTCTTCTACCTGGAATaGCTGGAGACTTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQFFYLE*LETWRV
Trigger: GACTCTCCAAGTCTCCAGCCATTCCAGGTAGAAGAA...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp ATACCTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGAGAGAACGATCTCGATaGTCACTTCTTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: IPHVYLESWAECCPFQIPRERSR*SLLHPG
Trigger: GCCTGGATGAAGAAGTGACCATCGAGATCGTTCTCT...CGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGAAGCCAGCCAGTGTTTaGACACACCAGCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQKPASV*THQHSK
Trigger: CTTGGAGTGCTGGTGTGTCCAAACACTGGCTGGCTT...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCTACAAAATACCCGTCTaGTTTGACTTGCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: GGLETDTHTARVPCGDEGYKIPV*FDLQIK
Trigger: TTTAATCTGCAAGTCAAACCAGACGGGTATTTTGTA...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTTGCATTTACTGCTCCTaGGCATGCAGATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCCIYCS*ACRCIY
Trigger: GTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCA...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
3UTR CAA 72 bp TCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTaGAAGTCCCAACCTCTAGTACCTCAGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: SWAECCPFQIPM*KSQPLVPQNVT
Trigger: GGTCACATTCTGAGGTACTAGAGGTTGGGACTTCAACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACAGCAAATGGAGGCGCCTaGAAAACAATGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTANGGA*KTMVLL
Trigger: AAGCAACACCATTGTTTTTCAGGCGCCTCCATTTGC...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR TCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAACAGTGTTCTTCTCTTaGGTCAGACGTCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTTVFFS*VRRLKQ
Trigger: CTGCTTCAGACGTCTGACTCAAGAGAAGAACACTGT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGCTTACTGCAACTTCTaGCTCCCAGACTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVAYCNF*LPDSSN
Trigger: ATTGCTTGAGTCTGGGAGGCAGAAGTTGCAGTAAGC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCATCCTGGGCATGCAGATaGATCTACACAGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: RKINRYDDCFQTSRRSSASWACR*IYTETA
Trigger: TGCTGTTTCTGTGTAGATGCATCTGCATGCCCAGGA...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGAGAGAACGATCTCGATaGTCACTTCTTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWRERSR*SLLHPG
Trigger: GCCTGGATGAAGAAGTGACCATCGAGATCGTTCTCT...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTAGTTCAGAGCCTGCTTaGAACGGCGCTTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLSSEPA*NGASCA
Trigger: TGCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACT...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGCAGATCCCTAGTGATTaGCCCCCAGGAAAATCAACA +
Preference number: 4 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWQIPSD*PPGKST
Trigger: TGTTGATTTTCCTGGGGGCCAATCACTAGGGATCTG...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACTAGACAGGACAGATTaGAAGAAGGGACTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPLDRTD*KKGLKC
Trigger: GCACTTAAGTCCCTTCTTCCAATCTGTCCTGTCTAG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTCGTGTACAGAGAGCCTaGCTTCTACTTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCRVQRA*LLLGIF
Trigger: GAAAATTCCAAGTAGAAGCCAGGCTCTCTGTACACG...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCATGCATGGCATCAACCTaGGTTTCAGTTACATTACCC +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPCMAST*VSVTLP
Trigger: GGGTAATGTAACTGAAACCCAGGTTGATGCCATGCA...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
3UTR CAA 72 bp TCTAGTACCTCAGAATGTGACCTTATTGGTAAACGGTaGCTGCGGATACAGATGAGGTTATACTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SSTSECDLIGKR*LRIQMRLYWSR
Trigger: CCGACTCCAGTATAACCTCATCTGTATCCGCAGCAACCGTTTACCAATAAGGTCACATTCTGAGGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGTTTATCTGGAGTCATaGGCTGAATGCTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVVYLES*AECCPF
Trigger: AAAGGGACAGCATTCAGCCCATGACTCCAGATAAAC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTGAGCACACAGGTAGGTaGGGTAAACGTGTACAGAGA +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLEHTGR*GKRVQR
Trigger: TCTCTGTACACGTTTACCCCACCTACCTGTGTGCTC...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTTTTATTATGCACCTGTaGGTTTGTGACGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCFIMHL*VCDDAK
Trigger: CTTGGCATCGTCACAAACCCACAGGTGCATAATAAA...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR GCA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTTTTTATTGCATTTACTaGTCCTGGGCATGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SQCLDTPALQANVSIKCVFYCIY*SWACRC
Trigger: GCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAA...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACATTTTATTGCATTTACTaGTCCTGGGCATGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTFYCIY*SWACRC
Trigger: GCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAA...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCTTTACCAAGGATCTTTaGGGTATAAAGACATTATGG +
Preference number: 4 (lower is better)
Translates to: LLLHGINLGFSYITQEDFFTKDL*GIKTLW
Trigger: CCATAATGTCTTTATACCCCAAAGATCCTTGGTAAA...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGCTAGACAGGACAGATTaGAAGAAGGGACTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: DFIAFTAPGHADASTQKQLDRTD*KKGLKC
Trigger: GCACTTAAGTCCCTTCTTCCAATCTGTCCTGTCTAG...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAAGCAAGTTTTTATTATaGACCTGTGGGTTTGTGACG +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTSKFLL*TCGFVT
Trigger: CGTCACAAACCCACAGGTGCATAATAAAAACTTGCT...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CCA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAGGTATAAAGACATTATaGGGTAGGTGTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTGIKTL*GRCATQ
Trigger: TTGTGTTGCACACCTACCCCATAATGTCTTTATACC...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR TCA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTCCTTTGATGGAATTGTaGGCAAGCTCACTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLPLMEL*ASSLKF
Trigger: AAACTTGAGTGAGCTTGCTCACAATTCCATCAAAGG...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR GCA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGAAGAAGGGACTTAAGTaGCTTTTAAACGATGACAAC +
Preference number: 4 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWKKGLK*LLNDDN
Trigger: GTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTT...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCATTTACCAAGGATCTTTaGGGTATAAAGACATTATGG +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPFTKDL*GIKTLW
Trigger: CCATAATGTCTTTATACCCCAAAGATCCTTGGTAAA...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CCA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCATACAAAATACCCGTCTaGTTTGACTTGCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPYKIPV*FDLQIK
Trigger: TTTAATCTGCAAGTCAAACCAGACGGGTATTTTGTA...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS CCA 90 bp CACAGCCTGGAGCTCCCTCCCGGCGTCCGGCCGAAAACCCTCCTGTaGCGGCGGAAGTCCAGGGCAGCCGTCCTCATCCTCCCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: HSLELPPGVRPKTLL*RRKSRAAVLILPAR
Trigger: GCGGGCTGGGAGGATGAGGACGGCTGCCCTGGACTTCCGCCGCCACAGGAGGGTTTTCGGCCGGACGCCGGGAGGGAGCTCCAGGCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS GCA 90 bp CGTAGGACTTCTTGGAGGTCTGCACCTCGCCTCCGGCCTCGGTGCTaGTCCGGTGGGAGGCGGGGAGGCTGCGCTGCTTCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RRTSWRSAPRLRPRC*SGGRRGGCAASLWG
Trigger: GCCCCACAGAGAAGCAGCGCAGCCTCCCCGCCTCCCACCGGAGCAGCACCGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGTCCTACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS GCA 90 bp GATGCCGCCTGCTCTCTCTTCTCCACCGGCTGGAGTCTGTCCGGCTaGAGGTGTATCCGCCGGTGGGAGAGCAGGTGGGAGTTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: DAACSLFSTGWSLSG*RCIRRWESRWEFRR
Trigger: CCGCCTGAACTCCCACCTGCTCTCCCACCGGCGGATACACCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 90 bp TTGTCCGCGTCCTCGGATGCCGCCTGCTCTCTCTTCTCCACCGGCTaGAGTCTGTCCGGCTGCAGGTGTATCCGCCGGTGGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSASSDAACSLFSTG*SLSGCRCIRRWESR
Trigger: CCTGCTCTCCCACCGGCGGATACACCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 90 bp AGGCCGCCCCAGGCGGAGAGGCTCAGTAGGAGTTCAGAGCCTGCTTaGAACGGCGCTTCATGTGCAGGCGCTCGTGGCGGAGGAGGTCAT +
Preference number: 5 (lower is better)
Translates to: RPPQAERLSRSSEPA*NGASCAGARGGGGH
Trigger: ATGACCTCCTCCGCCACGAGCGCCTGCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACTCCTACTGAGCCTCTCCGCCTGGGGCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS GCA 90 bp CCCCAGGCACTGTGCCAGGGTTATGGGCTGGGCATCCTGGTTCTTTaGAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTCCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: PQALCQGYGLGILVL*KVAVGLYRQLLLLL
Trigger: CAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAGTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000478225.5
ENST00000682384.1
CDS CCA 90 bp GCCAGGGTTATGGGCTGGGCATCCTGGTTCTTTGCAAGGTCGCTGTaGGGCTCTACCGGCAGCTGCTCCTGCTCCTGGTCCAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ARVMGWASWFFARSL*GSTGSCSCSWSRGL
Trigger: CAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS CCA 90 bp AGGCCCACTGTGTTGGGAGGTGACCCCGCCTTCCAAACCCACAGGTaGCAGCTTCACTGGGCAGGAGTTGAGTCCCCAAGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RPTVLGGDPAFQTHR*QLHWAGVESPRPWV
Trigger: CACCCAGGGCCTTGGGGACTCAACTCCTGCCCAGTGAAGCTGCCACCTGTGGGTTTGGAAGGCGGGGTCACCTCCCAACACAGTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp CCCGCTGAGCTGGCTTGGTGGTCTGCTTGGGAGCCCCAGGCACTGTaGCAGGGTTATGGGCTGGGCATCCTGGTTCTTTGCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: PAELAWWSAWEPQAL*QGYGLGILVLCKVA
Trigger: AGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAGTGCCTGGGGCTCCCAAGCAGACCACCAAGCCAGCTCAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000478225.5
ENST00000682384.1
CDS GCA 90 bp CCTCAGTGCTGGGGAGGCTGCACATCCACCACTCCTATGGTGCGCTaGTGGGCAATGTCCAGAGGTCACCAGCGTGCTCGCCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: PQCWGGCTSTTPMVR*WAMSRGHQRARPSM
Trigger: CATTGAGGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp TTCCTCCTCAGTGCTGGGGAGGCTGCACATCCACCACTCCTATGGTaGGCTGCTGGGCAATGTCCAGAGGTCACCAGCGTGCTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: FLLSAGEAAHPPLLW*AAGQCPEVTSVLAP
Trigger: AGGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp TCCTGCAGCAACCAGGGCTGGTCCAGAAGAGAGAAGGCGGAGGGATaGCCAGCGGGCATGGCACCATCAGGGGCGAGAAGTGAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SCSNQGWSRREKAEG*PAGMAPSGARSEKA
Trigger: GGCCTTTTCACTTCTCGCCCCTGATGGTGCCATGCCCGCTGGGCATCCCTCCGCCTTCTCTCTTCTGGACCAGCCCTGGTTGCTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp CGGGTTGCCGCCAGCTGGGTAGGTGTTTTGAGGCACCACCGTCTGTaGGCAGGCCTGGAACTCTGGCACCTGCAGCTCCTCACGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RVAASWVGVLRHHRL*AGLELWHLQLLTFP
Trigger: AGGAAACGTGAGGAGCTGCAGGTGCCAGAGTTCCAGGCCTGCCCACAGACGGTGGTGCCTCAAAACACCTACCCAGCTGGCGGCAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 90 bp CAGTGCTGGGGAGGCTGCACATCCACCACTCCTATGGTGCGCTGCTaGGCAATGTCCAGAGGTCACCAGCGTGCTCGCCCCTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: QCWGGCTSTTPMVRC*AMSRGHQRARPSMQ
Trigger: CTGCATTGAGGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp GTCTTCCTCCTCAGTGCTGGGGAGGCTGCACATCCACCACTCCTATaGTGCGCTGCTGGGCAATGTCCAGAGGTCACCAGCGTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VFLLSAGEAAHPPLL*CAAGQCPEVTSVLA
Trigger: GGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAGGAGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp AGGGCTGGTCCAGAAGAGAGAAGGCGGAGGGATGCCCAGCGGGCATaGCACCATCAGGGGCGAGAAGTGAAAAGGCCAGAGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RAGPEERRRRDAQRA*HHQGREVKRPELAV
Trigger: CACTGCCAGCTCTGGCCTTTTCACTTCTCGCCCCTGATGGTGCCATGCCCGCTGGGCATCCCTCCGCCTTCTCTCTTCTGGACCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TCCAGCGGAAGATTTTCCCACAGTTCGGACACACGTAGGACTTCTTaGAGGTCTGCACCTCGCCTCCGGCCTCGGTGCTGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSGRFSHSSDTRRTS*RSAPRLRPRCCSGG
Trigger: CCCACCGGAGCAGCACCGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGTCCTACGTGTGTCCGAACTGTGGGAAAATCTTCCGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGGCTCTTTGGGACCCTaGTCCGCGTCCTCGGATGCC +
Preference number: 5 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTGSLGP*SASSDA
Trigger: GGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS GCA 90 bp TGGTTCTTTGCAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTCCTaGTCCTGGTCCAGAGGGCTGTCCCCATCATCAATCACCACAGGG +
Preference number: 5 (lower is better)
Translates to: WFFARSLWGSTGSCS*SWSRGLSPSSITTG
Trigger: CCCTGTGGTGATTGATGATGGGGACAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGGCTCTTTGGGACCCTaGTCCGCGTCCTCGGATGCC +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSGSLGP*SASSDA
Trigger: GGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS TCA 90 bp TCCTCACAGCACCCCTGTACCAGGCAGATGGGAAGACTAGACAGGTaGGGCACCTCAAAGGGCTGCGCTCGGTGCCCAGTTAGGAGACAC +
Preference number: 5 (lower is better)
Translates to: SSQHPCTRQMGRLDR*GTSKGCARCPVRRH
Trigger: GTGTCTCCTAACTGGGCACCGAGCGCAGCCCTTTGAGGTGCCTCACCTGTCTAGTCTTCCCATCTGCCTGGTACAGGGGTGCTGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp ATTAGGGGCCGCAGAGAGAAGCCAGAGAGTGGGCTCACCTCCGGCTaGCAGCAACCCTTCCCCCTACTCTGTCCACTCAGTTCTGGAATC +
Preference number: 5 (lower is better)
Translates to: IRGRREKPESGLTSG*QQPFPLLCPLSSGI
Trigger: GATTCCAGAACTGAGTGGACAGAGTAGGGGGAAGGGTTGCTGGCAGCCGGAGGTGAGCCCACTCTCTGGCTTCTCTCTGCGGCCCCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TTTGCAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTCCTGCTCCTaGTCCAGAGGGCTGTCCCCATCATCAATCACCACAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FARSLWGSTGSCSCS*SRGLSPSSITTGSS
Trigger: TGAAGACCCTGTGGTGATTGATGATGGGGACAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS CCA 90 bp AGCACTGGAAGCTCAGTTTGGCCTTGCCGTTTTCCAGCGGCTCTTTaGGACCCTTGTCCGCGTCCTCGGATGCCGCCTGCTCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: STGSSVWPCRFPAAL*DPCPRPRMPPALSS
Trigger: AGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS-3UTR CAA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAAAGCAGGCCACTATCTaGAAGCTCCGGAGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSKQATI*KLRSRS
Trigger: ACTTCGGCTCCGGAGCTTCAAGATAGTGGCCTGCTT...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CAA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACACCTGGGGCACTTCTTaGCCCTGGAGATCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDTWGTS*PWRSCN
Trigger: GTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGT...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCGGGCATCCTGGTTCTTaGCAAGGTCGCTGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSGHPGS*QGRCGA
Trigger: AGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCC...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGAAGGTATGTCCTGGGTGGGGGCGCTGATCAGTACCAAGGTGAGGGGGCAGCAAAGAAGGAAAGCATCTaGCAGAACTGGGTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GRYVLGGGADQYQGEGAAKKESI*QNWVPA
Trigger: AGCGGGGACCCAGTTCTGCAAGATGCTTTCCTTCTT...TGCTGCCCCCTCACCTTGGTACTGATCAGCGCCCCCACCCAGGACATACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAGGTCGTTTGGAGGCATaGAGACCCCGTAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTGRLEA*RPRNPP
Trigger: GGGAGGATTACGGGGTCTCAATGCCTCCAAACGACC...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAAGCTGGGTAGGTGTTTaGAGGCACCACCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: FITWGRESAPMAPPERSLSWVGV*RHHRLW
Trigger: CCACAGACGGTGGTGCCTCAAAACACCTACCCAGCT...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCTTTTCCAGCGGCTCTTaGGGACCCTTGTCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSFSSGS*GPLSAS
Trigger: GGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAA...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTAGAGTTCAGAGCCTGCTaGGAACGGCGCTTCATGTGC +
Preference number: 5 (lower is better)
Translates to: FITWGRESAPMAPPERSLEFRAC*ERRFMC
Trigger: GCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACTC...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS GCA 90 bp CAAGGATGTGGAGAAACAGGTCTTCCTCCTCAGTGCTGGGGAGGCTaGACATCCACCACTCCTATGGTGCGCTGCTGGGCAATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: QGCGETGLPPQCWGG*TSTTPMVRCWAMSR
Trigger: TCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAGGAGGAAGACCTGTTTCTCCACATCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp AGCAGATGCTTCGAAGCACCATGGCATGGAGATCATGGGTGCAAGTaGTGGCGACACAGCCTGAAGGAGGGCTGGAAACTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRCFEAPWHGDHGCK*WRHSLKEGWKLLLL
Trigger: CAGCAGCAGCAGTTTCCAGCCCTCCTTCAGGCTGTGTCGCCAGCACTTGCACCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TGGAGATCCTGCAACTCTGGAACGCGTGGCTCATTCTCCTCTCCCTaGGAGAGATCTGGCTGGGCAGCTAGGTCGTTTGGAGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: WRSCNSGTRGSFSSP*ERSGWAARSFGGIE
Trigger: CTCAATGCCTCCAAACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000682384.1
CDS CCA 90 bp TGGCAAAATCCACATGGCAGCTACCTGGCTGGGTGGCCAAGGATGTaGAGAAACAGGTCTTCCTCCTCAGTGCTGGGGAGGCTGCACATC +
Preference number: 5 (lower is better)
Translates to: WQNPHGSYLAGWPRM*RNRSSSSVLGRLHI
Trigger: GATGTGCAGCCTCCCCAGCACTGAGGAGGAAGACCTGTTTCTCCACATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp AGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGGGTCGTTTGGAGGCATaGAGACCCCGTAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: SKGMKPLLPHSSRKAPTLGRLEA*RPRNPP
Trigger: GGGAGGATTACGGGGTCTCAATGCCTCCAAACGACC...CAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGAGGTTTGGAGACAGACACGCACACAGCAAGAGTGCCATGTGGAGATGAAGGCGGGCAGCTAGGTCGTTaGGAGGCATTGAGACCCCGT +
Preference number: 5 (lower is better)
Translates to: GGLETDTHTARVPCGDEGGQLGR*EALRPR
Trigger: ACGGGGTCTCAATGCCTCCAAACGACCTAGCTGCCC...GCCTTCATCTCCACATGGCACTCTTGCTGTGTGCGTGTCTGTCTCCAAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCACCTGGGGCACTTCTTaGCCCTGGAGATCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSTWGTS*PWRSCN
Trigger: GTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGT...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCAGCTGGGTAGGTGTTTaGAGGCACCACCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSSWVGV*RHHRLW
Trigger: CCACAGACGGTGGTGCCTCAAAACACCTACCCAGCT...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAAAGCTCAGTTTGGCCTaGCCGTTTTCCAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTKLSLA*PFSSGS
Trigger: AGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTT...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAGGGAGGAAGGGGAATTaGTCAGCGTTTACGGCTATT +
Preference number: 5 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSGRKGN*SAFTAI
Trigger: AATAGCCGTAAACGCTGACAAATTCCCCTTCCTCCC...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp CCAGCTGGCCTGCCCAGCCCCCATCAGAAGGCAGGGAGGAAGGGGAATTTGTCAATTCTGTCACCTAGCTaGTGCAGTGGCATGATCTCG +
Preference number: 5 (lower is better)
Translates to: PAGLPSPHQKAGRKGNLSILSPS*CSGMIS
Trigger: CGAGATCATGCCACTGCACAAGCTAGGTGACAGAAT...TGACAAATTCCCCTTCCTCCCTGCCTTCTGATGGGGGCTGGGCAGGCCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS GCA 90 bp GCTGGAGACTTGGAGAGTCCAAGTAGGAGACCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACTCTGGAACGCGTGGCTCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: AGDLESPSRRPGALL*PGDPATLERVAHSP
Trigger: AGGAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGTCTCCTACTTGGACTCTCCAAGTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000682384.1
CDS GCA 90 bp ACCACAGGCTCCTGCACACTCCGCACATCCTGCACAAACAGCTTGTaGAGAGCCTACAGGGTAGAGATGGTACAGGAGCTACTGCACCAC +
Preference number: 5 (lower is better)
Translates to: TTGSCTLRTSCTNSL*RAYRVEMVQELLHH
Trigger: GTGGTGCAGTAGCTCCTGTACCATCTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGAGCCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp CTTCTGTGCAGTACGGGCCATGCTGGGAGTCCTCGTCCCCAGAGCTaGAGAGAACGATCTCGATGGTCACTTCTTCATCCAGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LLCSTGHAGSPRPQS*RERSRWSLLHPGCS
Trigger: AGAACAGCCTGGATGAAGAAGTGACCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGGACTCCCAGCATGGCCCGTACTGCACAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 90 bp CTCCTGAAGGAGCAGATGCTTCGAAGCACCATGGCATGGAGATCATaGGTGCAAGTGCTGGCGACACAGCCTGAAGGAGGGCTGGAAACT +
Preference number: 5 (lower is better)
Translates to: LLKEQMLRSTMAWRS*VQVLATQPEGGLET
Trigger: AGTTTCCAGCCCTCCTTCAGGCTGTGTCGCCAGCACTTGCACCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCTCCTTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGGGCAGCTAGGTCGTTaGGAGGCATTGAGACCCCGT +
Preference number: 5 (lower is better)
Translates to: LRATERILSTGRSTQVGGGQLGR*EALRPR
Trigger: ACGGGGTCTCAATGCCTCCAAACGACCTAGCTGCCC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS CCA 90 bp CCCTATCTTGTTTGGCAAAATCCACATGGCAGCTACCTGGCTGGGTaGCCAAGGATGTGGAGAAACAGGTCTTCCTCCTCAGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PYLVWQNPHGSYLAG*PRMWRNRSSSSVLG
Trigger: CCCCAGCACTGAGGAGGAAGACCTGTTTCTCCACATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp AGCTATTTCCTCCTGAAGGAGCAGATGCTTCGAAGCACCATGGCATaGAGATCATGGGTGCAAGTGCTGGCGACACAGCCTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SYFLLKEQMLRSTMA*RSWVQVLATQPEGG
Trigger: CCCTCCTTCAGGCTGTGTCGCCAGCACTTGCACCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCTCCTTCAGGAGGAAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGTTTTCCAGCGGCTCTTaGGGACCCTTGTCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEFSSGS*GPLSAS
Trigger: GGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAA...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGGCTGCCTGATCATCTaGGATCTGCGGGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFGCLII*DLRGAP
Trigger: AGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAAGGCACCAACTCTGAGGACAATTCTGTCACCTAGCTaGTGCAGTGGCATGATCTCG +
Preference number: 5 (lower is better)
Translates to: GMKPLLPHSSRKAPTLRTILSPS*CSGMIS
Trigger: CGAGATCATGCCACTGCACAAGCTAGGTGACAGAAT...TGTCCTCAGAGTTGGTGCCTTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS TCA 90 bp CAGGTTGGGGGTGAACAGAGAGATCTGATGCAGGCCCCGCTTCCCTaGTCCTATGGGACGAAGTTGACTCTTACTCCAAGTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: QVGGEQRDLMQAPLP*SYGTKLTLTPSENS
Trigger: GGAGTTCTCACTTGGAGTAAGAGTCAACTTCGTCCCATAGGATCAGGGAAGCGGGGCCTGCATCAGATCTCTCTGTTCACCCCCAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp AGGACGGGCAGTTTCTATACAACAGAAATCTGTTCCTCACAGTTCTaGAGGCTGGACGTCCAAGATCAAGGTGCCAGCAGGCTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: RTGSFYTTEICSSQF*RLDVQDQGASRLGA
Trigger: GGCACCCAGCCTGCTGGCACCTTGATCTTGGACGTCCAGCCTCCAGAACTGTGAGGAACAGATTTCTGTTGTATAGAAACTGCCCGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TCTGGAACGCGTGGCTCATTCTCCTCTCCCTGGGAGAGATCTGGCTaGGCAGCTAGGTCGTCTGTTCAAAGAAAAAGGCAGGGTACATGT +
Preference number: 5 (lower is better)
Translates to: SGTRGSFSSPWERSG*AARSSVQRKRQGTC
Trigger: ACATGTACCCTGCCTTTTTCTTTGAACAGACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACGCGTTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TGGAGATCCTGCAACTCTGGAACGCGTGGCTCATTCTCCTCTCCCTaGGAGAGATCTGGCTGGGCAGCTAGGTCGTCTGTTCAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: WRSCNSGTRGSFSSP*ERSGWAARSSVQRK
Trigger: TTTTCTTTGAACAGACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGAGTTCAGAGCCTGCTaGGAACGGCGCTTCATGTGC +
Preference number: 5 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFEFRAC*ERRFMC
Trigger: GCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACTC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCCTCCAGAGTAGCTGGGACCGCAAACGTCAACACCACACCCAGCTAATTTTTGAGGACACCCTGATCTaGGACGTGCACCTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SLQSSWDRKRQHHTQLIFEDTLI*DVHLPE
Trigger: TTCTGGGAGGTGCACGTCCAAGATCAGGGTGTCCTC...AAAAATTAGCTGGGTGTGGTGTTGACGTTTGCGGTCCCAGCTACTCTGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGGAGGACACCCTGATCTaGGACGTGCACCTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEEDTLI*DVHLPE
Trigger: TTCTGGGAGGTGCACGTCCAAGATCAGGGTGTCCTC...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS GCA 90 bp CACTCCTATGGTGCGCTGCTGGGCAATGTCCAGAGGTCACCAGCGTaGTCGCCCCTCAATGCAGAGATTCCTAAAGTTTATGTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: HSYGALLGNVQRSPA*SPLNAEIPKVYVVA
Trigger: TGCAACAACATAAACTTTAGGAATCTCTGCATTGAGGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp TCTGGAATCATTACTCACCCAAGTAGGAGACCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACTCTGGAACGCGTGGCTCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: SGIITHPSRRPGALL*PGDPATLERVAHSP
Trigger: AGGAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGTCTCCTACTTGGGTGAGTAATGATTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp CACCTCATCCCTATCTTGTTTGGCAAAATCCACATGGCAGCTACCTaGCTGGGTGGCCAAGGATGTGGAGAAACAGGTCTTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HLIPILFGKIHMAAT*LGGQGCGETGLPPQ
Trigger: CTGAGGAGGAAGACCTGTTTCTCCACATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp AGAAGAGACAGAAAGGAGACCGACTACCCCAGGTCCAGGCGCCAGTaGACACACTGCTTTGTTATTTCTGCTCTTGGATCCACCTCATCC +
Preference number: 5 (lower is better)
Translates to: RRDRKETDYPRSRRQ*THCFVISALGSTSS
Trigger: GGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCCTGGACCTGGGGTAGTCGGTCTCCTTTCTGTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGAGCAGAAGACGACCCTaGGGTGGCTGGGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQSRRRP*GGWVLL
Trigger: CAGGAGGACCCAGCCACCCAAGGGTCGTCTTCTGCT...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CAA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGCACTGGAAGCTCAGTTaGGCCTTGCCGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGEHWKLS*ALPFSS
Trigger: GCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTG...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp CTTAGAGCTACAGAGAGAATCCTCAGCACAGGTAGGAGCACACAGGTAGGTGGGGAGCCTGGCTTCTACTaGGAATTTTCCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LRATERILSTGRSTQVGGEPGFY*EFSPPL
Trigger: CAAGGGAGGGGAAAATTCCAAGTAGAAGCCAGGCTC...CCCACCTACCTGTGTGCTCCTACCTGTGCTGAGGATTCTCTCTGTAGCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS TCA 90 bp CAGTTAGGAGACACTCCCTCTGCAACTAGGCTTGTCATGAGTATCTaGCTTCACTCCTGGAGGGGCTGCTGCATTGTCAGCACAAACCAG +
Preference number: 5 (lower is better)
Translates to: QLGDTPSATRLVMSI*LHSWRGCCIVSTNQ
Trigger: CTGGTTTGTGCTGACAATGCAGCAGCCCCTCCAGGAGTGAAGTCAGATACTCATGACAAGCCTAGTTGCAGAGGGAGTGTCTCCTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp AGAAAGGAGACCGACTACCCCAGGTCCAGGCGCCAGTGGACACACTaGTTTGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTTGT +
Preference number: 5 (lower is better)
Translates to: RKETDYPRSRRQWTH*FVISALGSTSSLSC
Trigger: ACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCCTGGACCTGGGGTAGTCGGTCTCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp TCATCCCTATCTTGTTTGGCAAAATCCACATGGCAGCTACCTGGCTaGGTGGCCAAGGATGTGGAGAAACAGGTCTTCCTCCTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SSLSCLAKSTWQLPG*VAKDVEKQVFLLSA
Trigger: AGCACTGAGGAGGAAGACCTGTTTCTCCACATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp CTAGACAGAATCGACGTAGATCCGGGTTCTACTCCACCCACTCTATaGCCAGAGACAAGCACTTCCCCCAGCCCCATATTTATTCCCACT +
Preference number: 5 (lower is better)
Translates to: LDRIDVDPGSTPPTL*PETSTSPSPIFIPT
Trigger: AGTGGGAATAAATATGGGGCTGGGGGAAGTGCTTGTCTCTGGCCATAGAGTGGGTGGAGTAGAACCCGGATCTACGTCGATTCTGTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp GCTCACCCAGACAGGAGAACCCCTCACTGGGGGCAGAGCTCCACATTCCTAGACTTTCAAATTCCGATGTaGAAGTCCCAACCTCTAGTA +
Preference number: 5 (lower is better)
Translates to: AHPDRRTPHWGQSSTFLDFQIPM*KSQPLV
Trigger: TACTAGAGGTTGGGACTTCAACATCGGAATTTGAAA...GTCTAGGAATGTGGAGCTCTGCCCCCAGTGAGGGGTTCTCCTGTCTGGGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCCAGCGTTTACGGCTATaGAGTATGATTCTTCCATGC +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSQRLRL*SMILPC
Trigger: GCATGGAAGAATCATACTCAATAGCCGTAAACGCTG...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCCCCGTCTGGTTTGACTaGCAGATTAAATCACTGCTA +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSPVWFD*QIKSLL
Trigger: TAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGG...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS TCA 90 bp AGTCCGGGACGAGCTAGGTGTCTCAGTCTTAGTCCACTGAGGCTGTaGCAACACAACGCTGTAGGACGGGCAGTTTCTATACAACAGAAA +
Preference number: 5 (lower is better)
Translates to: SPGRARCLSLSPLRL*QHNAVGRAVSIQQK
Trigger: TTTCTGTTGTATAGAAACTGCCCGTCCTACAGCGTTGTGTTGTCACAGCCTCAGTGGACTAAGACTGAGACACCTAGCTCGTCCCGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 90 bp ATGTTCTATTTGGTTCTGATAAGCCTGATGTGGCGAGACAGCAGGTaGTGGTCAATCGGACACACTGCCTGTAGGGCCGCTGTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: MFYLVLISLMWRDSR*WSIGHTACRAAVCK
Trigger: TTTGCACACAGCGGCCCTACAGGCAGTGTGTCCGATTGACCATCACCTGCTGTCTCGCCACATCAGGCTTATCAGAACCAAATAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 90 bp TTTTCTATAGTCATCACCACAGGCTCCTGCACACTCCGCACATCCTaGACAAACAGCTTGTGCAGAGCCTACAGGGTAGAGATGGTACAG +
Preference number: 5 (lower is better)
Translates to: FSIVITTGSCTLRTS*TNSLCRAYRVEMVQ
Trigger: CTGTACCATCTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGAGCCTGTGGTGATGACTATAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGGGTCTTCACAGTGCTaGAGCCACTGCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SQCLDTPALQANVSIKCVGSSQC*SHCQGL
Trigger: GAGACCCTGGCAGTGGCTCAAGCACTGTGAAGACCC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp CTCCTGCTGCATGGCATCAACCTGGGTTTCAGTTACATTACCCAGGAGGATTTCAAGAAGGAAAGCATCTaGCAGAACTGGGTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: LLLHGINLGFSYITQEDFKKESI*QNWVPA
Trigger: AGCGGGGACCCAGTTCTGCAAGATGCTTTCCTTCTT...GAAATCCTCCTGGGTAATGTAACTGAAACCCAGGTTGATGCCATGCAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CAA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGCTGCCTGATCATCTaGGATCTGCGGGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWGCLII*DLRGAP
Trigger: AGGAGCACCCCGCAGATCCAAGATGATCAGGCAGCC...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TCTAGTCCAACATCCGCCAGCAGCTTCTCAGTGGAAGTGCAGGCATCCTGGAGCTATCTATCAAGTGTGTaGTCAGGCAAGGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SSPTSASSFSVEVQASWSYLSSV*SGKVLF
Trigger: GAACAGAACCTTGCCTGACAACACACTTGATAGATA...GCTCCAGGATGCCTGCACTTCCACTGAGAAGCTGCTGGCGGATGTTGGACTAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTCATTACCTGGGGGAGGGAGAGTGCTCCCATGGCACCACCCGAACGCTCACTATTTCAAATTCCGATGTaGAAGTCCCAACCTCTAGTA +
Preference number: 5 (lower is better)
Translates to: FITWGRESAPMAPPERSLFQIPM*KSQPLV
Trigger: TACTAGAGGTTGGGACTTCAACATCGGAATTTGAAA...TAGTGAGCGTTCGGGTGGTGCCATGGGAGCACTCTCCCTCCCCCAGGTAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCGGAGCACCAGGAGCCTaGCCTGACTTACTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAGAPGA*PDLLSV
Trigger: AACAGACAGTAAGTCAGGCAAGGCTCCTGGTGCTCC...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS TCA 90 bp GAAGGTGTGGAGCTGCTGATGATTCTGTACAAAGCTATTTCCTCCTaGAGGAGCAGATGCTTCGAAGCACCATGGCATGGAGATCATGGG +
Preference number: 5 (lower is better)
Translates to: EGVELLMILYKAISS*RSRCFEAPWHGDHG
Trigger: CCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCTCCTTCAGGAGGAAATAGCTTTGTACAGAATCATCAGCAGCTCCACACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 90 bp GCTTTGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTTGTTTaGCAAAATCCACATGGCAGCTACCTGGCTGGGTGGCCAAGGATG +
Preference number: 5 (lower is better)
Translates to: ALLFLLLDPPHPYLV*QNPHGSYLAGWPRM
Trigger: CATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp GATTTTATTGCATTTACTGCTCCTGGGCATGCAGATGCATCTACACAGAAACAGGGGTCTTCACAGTGCTaGAGCCACTGCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: DFIAFTAPGHADASTQKQGSSQC*SHCQGL
Trigger: GAGACCCTGGCAGTGGCTCAAGCACTGTGAAGACCC...CTGTTTCTGTGTAGATGCATCTGCATGCCCAGGAGCAGTAAATGCAATAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGGTTCTGTTCTGGAGCTaGGCTCACCCAGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQVLFWS*AHPDRR
Trigger: TCTCCTGTCTGGGTGAGCCAAGCTCCAGAACAGAAC...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AATGGCAACTGCCAGCAAAGGCATGAAGCCGCTTCTCCCTCACAGCTCTCGGAATATCTATCAAGTGTGTaGTCAGGCAAGGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NGNCQQRHEAASPSQLSEYLSSV*SGKVLF
Trigger: GAACAGAACCTTGCCTGACAACACACTTGATAGATA...TTCCGAGAGCTGTGAGGGAGAAGCGGCTTCATGCCTTTGCTGGCAGTTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGGTATAAAGACACACTGGAAGCTCAGTTaGGCCTTGCCGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: NSASNPQAFTKDLWGIKTHWKLS*ALPFSS
Trigger: GCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTG...TGTCTTTATACCCCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGGTTCTGTTCTGGAGCTaGGCTCACCCAGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWVLFWS*AHPDRR
Trigger: TCTCCTGTCTGGGTGAGCCAAGCTCCAGAACAGAAC...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp GGGAATTTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACAGGAGCACCAGGAGCCTaGCCTGACTTACTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GNLSAFTAIEYDSSMQRTGAPGA*PDLLSV
Trigger: AACAGACAGTAAGTCAGGCAAGGCTCCTGGTGCTCC...TGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCAGAAACAGAACACTCACTTGGCCACTCTTTCATTACCTGGGGGAGGGAGAGAACAGTGTTCTTCTCTaGAGTCAGACGTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SRNRTLTWPLFHYLGEGENSVLL*SQTSEA
Trigger: TGCTTCAGACGTCTGACTCAAGAGAAGAACACTGTT...CTCTCCCTCCCCCAGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CAA 90 bp TTGTCAGCGTTTACGGCTATTGAGTATGATTCTTCCATGCAGAGGACACCTGCCCAAAGAGAGAGGATGTaGCTCAGATGGGGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: LSAFTAIEYDSSMQRTPAQRERM*LRWGSQ
Trigger: TTGAGACCCCCATCTGAGCAACATCCTCTCTCTTTG...GGCAGGTGTCCTCTGCATGGAAGAATCATACTCAATAGCCGTAAACGCTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS-3UTR CAA 90 bp AAAATACCCGTCTGGTTTGACTTGCAGATTAAATCACTGCTAGACTACAGCCTTAAGCTCAGTTTGGCCTaGCCGTTTTCCAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: KIPVWFDLQIKSLLDYSLKLSLA*PFSSGS
Trigger: AGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTT...AAGGCTGTAGTCTAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTGGGAGGAAGGGGAATTaGTCAGCGTTTACGGCTATT +
Preference number: 5 (lower is better)
Translates to: SQCLDTPALQANVSIKCVGRKGN*SAFTAI
Trigger: AATAGCCGTAAACGCTGACAAATTCCCCTTCCTCCC...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS GCA 90 bp ACCTATGGGTCACAGCACATTATGGTTTACGGCTTGAGAATAATCTaGAGAATAATCCTTTTTGTCTTGATGCTGTGCTCCCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: TYGSQHIMVYGLRII*RIILFVLMLCSPGP
Trigger: TGGGCCTGGGGAGCACAGCATCAAGACAAAAAGGATTATTCTGCAGATTATTCTCAAGCCGTAAACCATAATGTGCTGTGACCCATAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACCCGTCTGGTTTGACTaGCAGATTAAATCACTGCTA +
Preference number: 5 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPPVWFD*QIKSLL
Trigger: TAGCAGTGATTTAATCTGCAAGTCAAACCAGACGGG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS TCA 90 bp TCTACCTTCCACAAAACACTAATACATAAGCACAGTTCAGCCAAGTaGTTTGCCACTATAAGAAGGATGGCCTTTCCTCCATTGCCCACC +
Preference number: 5 (lower is better)
Translates to: STFHKTLIHKHSSAK*FATIRRMAFPPLPT
Trigger: GGTGGGCAATGGAGGAAAGGCCATCCTTCTTATAGTGGCAAATCACTTGGCTGAACTGTGCTTATGTATTAGTGTTTTGTGGAAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS-3UTR CAA 90 bp CTCACGTTTATCTGGAGTCATGGGCTGAATGCTGTCCCTTTCAAATTCCGATGTAAACAGAACACTCACTaGGCCACTCTTTCATTACCT +
Preference number: 5 (lower is better)
Translates to: LTFIWSHGLNAVPFKFRCKQNTH*ATLSLP
Trigger: AGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTT...ACATCGGAATTTGAAAGGGACAGCATTCAGCCCATGACTCCAGATAAACGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCACAGCGTTTACGGCTATaGAGTATGATTCTTCCATGC +
Preference number: 5 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAQRLRL*SMILPC
Trigger: GCATGGAAGAATCATACTCAATAGCCGTAAACGCTG...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCAAAACAGAACACTCACTaGGCCACTCTTTCATTACCT +
Preference number: 5 (lower is better)
Translates to: RKINRYDDCFQTSRRSSAKQNTH*ATLSLP
Trigger: AGGTAATGAAAGAGTGGCCAAGTGAGTGTTCTGTTT...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTTAAATTGCTTGAGGTTTCACTACCTGCTGTCACTCTCAGTCCGGAATCCCAGAAATACCCGTCTGGTTaGACTTGCAGATTAAATCAC +
Preference number: 5 (lower is better)
Translates to: FKLLEVSLPAVTLSPESQKYPSG*TCRLNH
Trigger: GTGATTTAATCTGCAAGTCAAACCAGACGGGTATTT...CTGGGATTCCGGACTGAGAGTGACAGCAGGTAGTGAAACCTCAAGCAATTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGCCAGTGTTTGGACACACCAGCACTCCAAGCTAATGTATCTATCAAGTGTGTTAAATACCCGTCTGGTTaGACTTGCAGATTAAATCAC +
Preference number: 5 (lower is better)
Translates to: SQCLDTPALQANVSIKCVKYPSG*TCRLNH
Trigger: GTGATTTAATCTGCAAGTCAAACCAGACGGGTATTT...AACACACTTGATAGATACATTAGCTTGGAGTGCTGGTGTGTCCAAACACTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp AGGAAAATCAACAGGTATGACGACTGTTTCCAAACCTCAAGAAGGAGCTCTGCAAACCAAATGATTTTATaGCATTTACTGCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RKINRYDDCFQTSRRSSANQMIL*HLLLLG
Trigger: GCCCAGGAGCAGTAAATGCAATAAAATCATTTGGTT...TGCAGAGCTCCTTCTTGAGGTTTGGAAACAGTCGTCATACCTGTTGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TTAAACGATGACAACTCCGCTTCCAACCCACAAGCATTTACCAAGGATCTTTGGAACCAAATGATTTTATaGCATTTACTGCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LNDDNSASNPQAFTKDLWNQMIL*HLLLLG
Trigger: GCCCAGGAGCAGTAAATGCAATAAAATCATTTGGTT...CCAAAGATCCTTGGTAAATGCTTGTGGGTTGGAAGCGGAGTTGTCATCGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294753.8
ENST00000461277.2
CDS-3UTR CAA 90 bp TGGAAGAAGGGACTTAAGTGCCTTTTAAACGATGACAACTCCGCTTCCAACCCACCTTTTCCAGCTATGTaGATACAAGAGACAAACTAT +
Preference number: 5 (lower is better)
Translates to: WKKGLKCLLNDDNSASNPPFPAM*IQETNY
Trigger: ATAGTTTGTCTCTTGTATCAACATAGCTGGAAAAGG...TGGGTTGGAAGCGGAGTTGTCATCGTTTAAAAGGCACTTAAGTCCCTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS TCA 90 bp GTTTATGTTGCACATGTGCAACGTAGTCTACAAAAGCTGCTTCACTaGAGCATTGATCTAATAAATACTGAAAACCTTGACACACATCAA +
Preference number: 5 (lower is better)
Translates to: VYVAHVQRSLQKLLH*SIDLINTENLDTHQ
Trigger: TTGATGTGTGTCAAGGTTTTCAGTATTTATTAGATCAATGCTTCAGTGAAGCAGCTTTTGTAGACTACGTTGCACATGTGCAACATAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp CTCATCCTCCCAGCCCGCCCGGCCGGGCGTACTCGCTaGGGCGGGGTCTCCGCAGGCGCCCGGCTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: LILPARPAGRTR*GGVSAGARLLS
Trigger: GGAAAGGAGCCGGGCGCCTGCGGAGACCCCGCCTCAGCGAGTACGCCCGGCCGGGCGGGCTGGGAGGATGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS GCA 72 bp ACTTCTTGGAGGTCTGCACCTCGCCTCCGGCCTCGGTaGTGCTCCGGTGGGAGGCGGGGAGGCTGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: TSWRSAPRLRPR*CSGGRRGGCAA
Trigger: AGCAGCGCAGCCTCCCCGCCTCCCACCGGAGCAGCACCGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GAGCTCCCTCCCGGCGTCCGGCCGAAAACCCTCCTGTaGCGGCGGAAGTCCAGGGCAGCCGTCCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: ELPPGVRPKTLL*RRKSRAAVLIL
Trigger: GAGGATGAGGACGGCTGCCCTGGACTTCCGCCGCCACAGGAGGGTTTTCGGCCGGACGCCGGGAGGGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS CCA 72 bp CCCATGGCAGCCCCTGGTGAGGGCCTGCCCTTGAGGTaGTTCTCTGCAGTGGCCCCACCTCTGTGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PMAAPGEGLPLR*FSAVAPPLWQL
Trigger: GAGCTGCCACAGAGGTGGGGCCACTGCAGAGAACCACCTCAAGGGCAGGCCCTCACCAGGGGCTGCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp GGCTCTCTAGGTGCCCATCCAGGTCCTCGCTGTCGCTaGACAGCTCCCCGCACACCGAGCACTCGTGCGGCT +
Preference number: 6 (lower is better)
Translates to: GSLGAHPGPRCR*TAPRTPSTRAA
Trigger: AGCCGCACGAGTGCTCGGTGTGCGGGGAGCTGTTCAGCGACAGCGAGGACCTGGATGGGCACCTAGAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS TCA 72 bp CCAAACCCACAGGTGGCAGCTTCACTGGGCAGGAGTTaGGTCCCCAAGGCCCTGGGTGGTCCCGCCCCATGG +
Preference number: 6 (lower is better)
Translates to: PNPQVAASLGRS*VPKALGGPAPW
Trigger: CCATGGGGCGGGACCACCCAGGGCCTTGGGGACTCAACTCCTGCCCAGTGAAGCTGCCACCTGTGGGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp TCCTCGGATGCCGCCTGCTCTCTCTTCTCCACCGGCTaGAGTCTGTCCGGCTGCAGGTGTATCCGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSDAACSLFSTG*SLSGCRCIRRW
Trigger: CCACCGGCGGATACACCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GGAGGGTGCTATCCGAATAGATGCCAGGCTACGATCTaGGGGCGGCCCTGGGCTCCGTCCTGGGGACTGGCA +
Preference number: 6 (lower is better)
Translates to: GGCYPNRCQATI*GRPWAPSWGLA
Trigger: TGCCAGTCCCCAGGACGGAGCCCAGGGCCGCCCCCAGATCGTAGCCTGGCATCTATTCGGATAGCACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GTGACTGAAGCGGGGCTCTCTGCTGTGGTCCCCTGCTaGCTGCGGGTCTTGCGCTCTGGGCCTGTGATGGGC +
Preference number: 6 (lower is better)
Translates to: VTEAGLSAVVPC*LRVLRSGPVMG
Trigger: GCCCATCACAGGCCCAGAGCGCAAGACCCGCAGCAAGCAGGGGACCACAGCAGAGAGCCCCGCTTCAGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp TGCTCTCTCTTCTCCACCGGCTGGAGTCTGTCCGGCTaGAGGTGTATCCGCCGGTGGGAGAGCAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: CSLFSTGWSLSG*RCIRRWESRWE
Trigger: CTCCCACCTGCTCTCCCACCGGCGGATACACCTGCAGCCGGACAGACTCCAGCCGGTGGAGAAGAGAGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS GCA 72 bp TCTTTGGGACCCTTGTCCGCGTCCTCGGATGCCGCCTaGTCTCTCTTCTCCACCGGCTGGAGTCTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SLGPLSASSDAA*SLFSTGWSLSG
Trigger: GCCGGACAGACTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS GCA 72 bp CAGCGGCTCTTTGGGACCCTTGTCCGCGTCCTCGGATaGCGCCTGCTCTCTCTTCTCCACCGGCTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: QRLFGTLVRVLG*RLLSLLHRLES
Trigger: AGACTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GCAGCAGAAGACGACCCTTGGGTGGCTGGGTCCTCCTaGAGAGATCCGAGATGGGCAGGCCAAGCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: AAEDDPWVAGSS*RDPRWAGQAGH
Trigger: GTGGCCTGCTTGGCCTGCCCATCTCGGATCTCTCCAGGAGGACCCAGCCACCCAAGGGTCGTCTTCTGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000478225.5
ENST00000682384.1
CDS CCA 72 bp GGCTGGAGTCTGTCCGGCTGCAGGTGTATCCGCCGGTaGGAGAGCAGGTGGGAGTTCAGGCGGAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: GWSLSGCRCIRR*ESRWEFRRKLF
Trigger: GAAGAGCTTCCGCCTGAACTCCCACCTGCTCTCCCACCGGCGGATACACCTGCAGCCGGACAGACTCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GGAGGCTGCACATCCACCACTCCTATGGTGCGCTGCTaGGCAATGTCCAGAGGTCACCAGCGTGCTCGCCCC +
Preference number: 6 (lower is better)
Translates to: GGCTSTTPMVRC*AMSRGHQRARP
Trigger: GGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp GACCCCGCCTTCCAAACCCACAGGTGGCAGCTTCACTaGGCAGGAGTTGAGTCCCCAAGGCCCTGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: DPAFQTHRWQLH*AGVESPRPWVV
Trigger: GACCACCCAGGGCCTTGGGGACTCAACTCCTGCCCAGTGAAGCTGCCACCTGTGGGTTTGGAAGGCGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp TCCAAACCCACAGGTGGCAGCTTCACTGGGCAGGAGTaGAGTCCCCAAGGCCCTGGGTGGTCCCGCCCCATG +
Preference number: 6 (lower is better)
Translates to: SKPTGGSFTGQE*SPQGPGWSRPM
Trigger: CATGGGGCGGGACCACCCAGGGCCTTGGGGACTCAACTCCTGCCCAGTGAAGCTGCCACCTGTGGGTTTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp GCCCCAGGCACTGTGCCAGGGTTATGGGCTGGGCATCCTGGTTCTTaGCAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: APGTVPGLWAGHPGS*QGRCGALPAAAPAP
Trigger: AGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAGTGCCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000478225.5
ENST00000682384.1
CDS GCA 72 bp GCAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTCCTaGTCCTGGTCCAGAGGGCTGTCCCCATCATCAATC +
Preference number: 6 (lower is better)
Translates to: ARSLWGSTGSCS*SWSRGLSPSSI
Trigger: GATTGATGATGGGGACAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS GCA 72 bp TGGGGAGGCTGCACATCCACCACTCCTATGGTGCGCTaGTGGGCAATGTCCAGAGGTCACCAGCGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: WGGCTSTTPMVR*WAMSRGHQRAR
Trigger: GCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp AACCAGGGCTGGTCCAGAAGAGAGAAGGCGGAGGGATaGCCAGCGGGCATGGCACCATCAGGGGCGAGAAGT +
Preference number: 6 (lower is better)
Translates to: NQGWSRREKAEG*PAGMAPSGARS
Trigger: ACTTCTCGCCCCTGATGGTGCCATGCCCGCTGGGCATCCCTCCGCCTTCTCTCTTCTGGACCAGCCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp CTACAGCACTACCTGGGAGGGTGCTATCCGAATAGATaGCAGGCTACGATCTGGGGGCGGCCCTGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: LQHYLGGCYPNR*QATIWGRPWAP
Trigger: CGGAGCCCAGGGCCGCCCCCAGATCGTAGCCTGGCATCTATTCGGATAGCACCCTCCCAGGTAGTGCTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp ATGGGCTGGGCATCCTGGTTCTTTGCAAGGTCGCTGTaGGGCTCTACCGGCAGCTGCTCCTGCTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: MGWASWFFARSL*GSTGSCSCSWS
Trigger: GGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS CCA 72 bp CCCAGGCACTGTGCCAGGGTTATGGGCTGGGCATCCTaGTTCTTTGCAAGGTCGCTGTGGGGCTCTACCGGC +
Preference number: 6 (lower is better)
Translates to: PRHCARVMGWAS*FFARSLWGSTG
Trigger: GCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAGTGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000478225.5
ENST00000682384.1
CDS CCA 72 bp ATCTTGCAGAACTGGGTCCCCGCTGAGCTGGCTTGGTaGTCTGCTTGGGAGCCCCAGGCACTGTGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ILQNWVPAELAW*SAWEPQALCQG
Trigger: ACCCTGGCACAGTGCCTGGGGCTCCCAAGCAGACCACCAAGCCAGCTCAGCGGGGACCCAGTTCTGCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000682384.1
CDS CCA 72 bp GCCAGCTGGGTAGGTGTTTTGAGGCACCACCGTCTGTaGGCAGGCCTGGAACTCTGGCACCTGCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: ASWVGVLRHHRL*AGLELWHLQLL
Trigger: GAGGAGCTGCAGGTGCCAGAGTTCCAGGCCTGCCCACAGACGGTGGTGCCTCAAAACACCTACCCAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GGGCTCCCCAGCTCTTCTGTGCAGTACGGGCCATGCTaGGAGTCCTCGTCCCCAGAGCTGGAGAGAACGATC +
Preference number: 6 (lower is better)
Translates to: GLPSSSVQYGPC*ESSSPELERTI
Trigger: GATCGTTCTCTCCAGCTCTGGGGACGAGGACTCCCAGCATGGCCCGTACTGCACAGAAGAGCTGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp CAGGCGGAGAGGCTCAGTAGGAGTTCAGAGCCTGCTTaGAACGGCGCTTCATGTGCAGGCGCTCGTGGCGGA +
Preference number: 6 (lower is better)
Translates to: QAERLSRSSEPA*NGASCAGARGG
Trigger: TCCGCCACGAGCGCCTGCACATGAAGCGCCGTTCCAAGCAGGCTCTGAACTCCTACTGAGCCTCTCCGCCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CAA 90 bp AAGCTCAGTTTGGCCTTGCCGTTTTCCAGCGGCTCTTTGGGACCCTaGTCCGCGTCCTCGGATGCCGCCTGCTCTCTCTTCTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: KLSLALPFSSGSLGP*SASSDAACSLFSTG
Trigger: GCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS GCA 72 bp CTGTGCCAGGGTTATGGGCTGGGCATCCTGGTTCTTTaGAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LCQGYGLGILVL*KVAVGLYRQLL
Trigger: GAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS GCA 72 bp AGTGCTGGGGAGGCTGCACATCCACCACTCCTATGGTaGGCTGCTGGGCAATGTCCAGAGGTCACCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SAGEAAHPPLLW*AAGQCPEVTSV
Trigger: CACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp CGCAGAGAGAAGCCAGAGAGTGGGCTCACCTCCGGCTaGCAGCAACCCTTCCCCCTACTCTGTCCACTCAGT +
Preference number: 6 (lower is better)
Translates to: RREKPESGLTSG*QQPFPLLCPLS
Trigger: ACTGAGTGGACAGAGTAGGGGGAAGGGTTGCTGGCAGCCGGAGGTGAGCCCACTCTCTGGCTTCTCTCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp AGCTCAGTTTGGCCTTGCCGTTTTCCAGCGGCTCTTTaGGACCCTTGTCCGCGTCCTCGGATGCCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SSVWPCRFPAAL*DPCPRPRMPPA
Trigger: AGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp CTCAGTGCTGGGGAGGCTGCACATCCACCACTCCTATaGTGCGCTGCTGGGCAATGTCCAGAGGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: LSAGEAAHPPLL*CAAGQCPEVTS
Trigger: GCTGGTGACCTCTGGACATTGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp TTGGCCTTGCCGTTTTCCAGCGGCTCTTTGGGACCCTaGTCCGCGTCCTCGGATGCCGCCTGCTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LALPFSSGSLGP*SASSDAACSLF
Trigger: GAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CAA 72 bp AAGCTCAGTTTGGCCTTGCCGTTTTCCAGCGGCTCTTaGGGACCCTTGTCCGCGTCCTCGGATGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: KLSLALPFSSGS*GPLSASSDAAC
Trigger: GCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CAA 72 bp GCAGTGGGGGCAGCACACGCAGGGAGAGCTATGGGCTaGGGGGTCTCTCTGAGGCTTTCGGGTGTAAAGCAG +
Preference number: 6 (lower is better)
Translates to: AVGAAHAGRAMG*GVSLRLSGVKQ
Trigger: CTGCTTTACACCCGAAAGCCTCAGAGAGACCCCCAAGCCCATAGCTCTCCCTGCGTGTGCTGCCCCCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp CAGCACTGGAAGCTCAGTTTGGCCTTGCCGTTTTCCAGCGGCTCTTaGGGACCCTTGTCCGCGTCCTCGGATGCCGCCTGCTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: QHWKLSLALPFSSGS*GPLSASSDAACSLF
Trigger: GAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CAA 90 bp ACTGAAGCGGGGCTCTCTGCTGTGGTCCCCTGCTTGCTGCGGGTCTaGCGCTCTGGGCCTGTGATGGGCAGAAGAGCCCTGATGATTTCT +
Preference number: 6 (lower is better)
Translates to: TEAGLSAVVPCLLRV*RSGPVMGRRALMIS
Trigger: AGAAATCATCAGGGCTCTTCTGCCCATCACAGGCCCAGAGCGCAAGACCCGCAGCAAGCAGGGGACCACAGCAGAGAGCCCCGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp CACCCCTGTACCAGGCAGATGGGAAGACTAGACAGGTaGGGCACCTCAAAGGGCTGCGCTCGGTGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: HPCTRQMGRLDR*GTSKGCARCPV
Trigger: AACTGGGCACCGAGCGCAGCCCTTTGAGGTGCCTCACCTGTCTAGTCTTCCCATCTGCCTGGTACAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp GGAGAAACAGGTCTTCCTCCTCAGTGCTGGGGAGGCTaGACATCCACCACTCCTATGGTGCGCTGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GETGLPPQCWGG*TSTTPMVRCWA
Trigger: TGCCCAGCAGCGCACCATAGGAGTGGTGGATGTGCAGCCTCCCCAGCACTGAGGAGGAAGACCTGTTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp CGTGGCTCATTCTCCTCTCCCTGGGAGAGATCTGGCTaGGCAGCTAGGTCGTTTGGAGGCATTGAGACCCCG +
Preference number: 6 (lower is better)
Translates to: RGSFSSPWERSG*AARSFGGIETP
Trigger: CGGGGTCTCAATGCCTCCAAACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000682384.1
CDS CCA 72 bp TGCTGTGGTCCCCTGCTTGCTGCGGGTCTTGCGCTCTaGGCCTGTGATGGGCAGAAGAGCCCTGATGATTTC +
Preference number: 6 (lower is better)
Translates to: CCGPLLAAGLAL*ACDGQKSPDDF
Trigger: GAAATCATCAGGGCTCTTCTGCCCATCACAGGCCCAGAGCGCAAGACCCGCAGCAAGCAGGGGACCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp ACTGTGCCAGGGTTATGGGCTGGGCATCCTGGTTCTTaGCAAGGTCGCTGTGGGGCTCTACCGGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TVPGLWAGHPGS*QGRCGALPAAA
Trigger: AGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAAAGAACCAGGATGCCCAGCCCATAACCCTGGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS TCA 72 bp GACCTCCTGTCCAGGTTGGGGGTGAACAGAGAGATCTaGTGCAGGCCCCGCTTCCCTGATCCTATGGGACGA +
Preference number: 6 (lower is better)
Translates to: DLLSRLGVNREI*CRPRFPDPMGR
Trigger: TCGTCCCATAGGATCAGGGAAGCGGGGCCTGCATCAGATCTCTCTGTTCACCCCCAACCTGGACAGGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp AGATTTTCCCACAGTTCGGACACACGTAGGACTTCTTaGAGGTCTGCACCTCGCCTCCGGCCTCGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: RFSHSSDTRRTS*RSAPRLRPRCC
Trigger: GCAGCACCGAGGCCGGAGGCGAGGTGCAGACCTCCAAGAAGTCCTACGTGTGTCCGAACTGTGGGAAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp AGGCCTTCCCACACTCACAGCACTGGAAGCTCAGTTTaGCCTTGCCGTTTTCCAGCGGCTCTTTGGGACCCT +
Preference number: 6 (lower is better)
Translates to: RPSHTHSTGSSV*PCRFPAALWDP
Trigger: AGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTGCTGTGAGTGTGGGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp GAGCAGATGCTTCGAAGCACCATGGCATGGAGATCATaGGTGCAAGTGCTGGCGACACAGCCTGAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: EQMLRSTMAWRS*VQVLATQPEGG
Trigger: CCCTCCTTCAGGCTGTGTCGCCAGCACTTGCACCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp TGCAGGCCCCGCTTCCCTGATCCTATGGGACGAAGTTaGCTCTTACTCCAAGTGAGAACTCCCCTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: CRPRFPDPMGRS*LLLQVRTPLPS
Trigger: ACTGGGCAGGGGAGTTCTCACTTGGAGTAAGAGTCAACTTCGTCCCATAGGATCAGGGAAGCGGGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp ATCGGACACACTGCCTGTAGGGCCGCTGTGTGCAAATaGCCTCCTGTCCAGGTTGGGGGTGAACAGAGAGAT +
Preference number: 6 (lower is better)
Translates to: IGHTACRAAVCK*PPVQVGGEQRD
Trigger: ATCTCTCTGTTCACCCCCAACCTGGACAGGAGGTCATTTGCACACAGCGGCCCTACAGGCAGTGTGTCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp TTGGAGAGTCCAAGTAGGAGACCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACTCTGGAACGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: LESPSRRPGALL*PGDPATLERVA
Trigger: AGCCACGCGTTCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGTCTCCTACTTGGACTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000682384.1
CDS GCA 72 bp GTCATCACCACAGGCTCCTGCACACTCCGCACATCCTaGACAAACAGCTTGTGCAGAGCCTACAGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: VITTGSCTLRTS*TNSLCRAYRVE
Trigger: CTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGAGCCTGTGGTGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp ATCATCCGGAAAGCCACGGCTCGGCTCGGGGGCAAATaGAGGCGCCTGAAAAACAATGGTGTTGCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: IIRKATARLGGK*RRLKNNGVAFS
Trigger: GGAGAAAGCAACACCATTGTTTTTCAGGCGCCTCCATTTGCCCCCGAGCCGAGCCGTGGCTTTCCGGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294753.8
CDS CCA 72 bp TTCTTTGCCCTGGAGATCCTGCAACTCTGGAACGCGTaGCTCATTCTCCTCTCCCTGGGAGAGATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: FFALEILQLWNA*LILLSLGEIWL
Trigger: CAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACGCGTTCCAGAGTTGCAGGATCTCCAGGGCAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp AGTACGGGCCATGCTGGGAGTCCTCGTCCCCAGAGCTaGAGAGAACGATCTCGATGGTCACTTCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: STGHAGSPRPQS*RERSRWSLLHP
Trigger: TGGATGAAGAAGTGACCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGGACTCCCAGCATGGCCCGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp CTCCTGAAGGAGCAGATGCTTCGAAGCACCATGGCATaGAGATCATGGGTGCAAGTGCTGGCGACACAGCCT +
Preference number: 6 (lower is better)
Translates to: LLKEQMLRSTMA*RSWVQVLATQP
Trigger: AGGCTGTGTCGCCAGCACTTGCACCCATGATCTCCATGCCATGGTGCTTCGAAGCATCTGCTCCTTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp TTCCCACACTCACAGCACTGGAAGCTCAGTTTGGCCTaGCCGTTTTCCAGCGGCTCTTTGGGACCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: FPHSQHWKLSLA*PFSSGSLGPLS
Trigger: GGACAAGGGTCCCAAAGAGCCGCTGGAAAACGGCAAGGCCAAACTGAGCTTCCAGTGCTGTGAGTGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CAA 72 bp GGCTCCTGCACACTCCGCACATCCTGCACAAACAGCTaGTGCAGAGCCTACAGGGTAGAGATGGTACAGGAG +
Preference number: 6 (lower is better)
Translates to: GSCTLRTSCTNS*CRAYRVEMVQE
Trigger: CTCCTGTACCATCTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp ATCACCACAGGCTCCTGCACACTCCGCACATCCTGCACAAACAGCTaGTGCAGAGCCTACAGGGTAGAGATGGTACAGGAGCTACTGCAC +
Preference number: 6 (lower is better)
Translates to: ITTGSCTLRTSCTNS*CRAYRVEMVQELLH
Trigger: GTGCAGTAGCTCCTGTACCATCTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGAGCCTGTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp TTGGTTCTGATAAGCCTGATGTGGCGAGACAGCAGGTaGTGGTCAATCGGACACACTGCCTGTAGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: LVLISLMWRDSR*WSIGHTACRAA
Trigger: AGCGGCCCTACAGGCAGTGTGTCCGATTGACCATCACCTGCTGTCTCGCCACATCAGGCTTATCAGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp GGTGCGCTGCTGGGCAATGTCCAGAGGTCACCAGCGTaGTCGCCCCTCAATGCAGAGATTCCTAAAGTTTAT +
Preference number: 6 (lower is better)
Translates to: GALLGNVQRSPA*SPLNAEIPKVY
Trigger: ATAAACTTTAGGAATCTCTGCATTGAGGGGCGAGCACGCTGGTGACCTCTGGACATTGCCCAGCAGCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp ACCGACTACCCCAGGTCCAGGCGCCAGTGGACACACTaGTTTGTTATTTCTGCTCTTGGATCCACCTCATCC +
Preference number: 6 (lower is better)
Translates to: TDYPRSRRQWTH*FVISALGSTSS
Trigger: GGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCCTGGACCTGGGGTAGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp GAGAAACCCGACTCTGAAAGCACAGGAGAACAGGGATaGCTCAGTCCGGGACGAGCTAGGTGTCTCAGTCTT +
Preference number: 6 (lower is better)
Translates to: EKPDSESTGEQG*LSPGRARCLSL
Trigger: AAGACTGAGACACCTAGCTCGTCCCGGACTGAGGCATCCCTGTTCTCCTGTGCTTTCAGAGTCGGGTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp ATTACTCACCCAAGTAGGAGACCTGGGGCACTTCTTTaGCCTGGAGATCCTGCAACTCTGGAACGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: ITHPSRRPGALL*PGDPATLERVA
Trigger: AGCCACGCGTTCCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGTCTCCTACTTGGGTGAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp CGTGGCTCATTCTCCTCTCCCTGGGAGAGATCTGGCTaGGCAGCTAGGTCGTCTGTTCAAAGAAAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: RGSFSSPWERSG*AARSSVQRKRQ
Trigger: CTGCCTTTTTCTTTGAACAGACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp TCCTGCACACTCCGCACATCCTGCACAAACAGCTTGTaGAGAGCCTACAGGGTAGAGATGGTACAGGAGCTA +
Preference number: 6 (lower is better)
Translates to: SCTLRTSCTNSL*RAYRVEMVQEL
Trigger: TAGCTCCTGTACCATCTCTACCCTGTAGGCTCTGCACAAGCTGTTTGTGCAGGATGTGCGGAGTGTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp GTTTGGCAAAATCCACATGGCAGCTACCTGGCTGGGTaGCCAAGGATGTGGAGAAACAGGTCTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VWQNPHGSYLAG*PRMWRNRSSSS
Trigger: TGAGGAGGAAGACCTGTTTCTCCACATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp ATCGACGTAGATCCGGGTTCTACTCCACCCACTCTATaGCCAGAGACAAGCACTTCCCCCAGCCCCATATTT +
Preference number: 6 (lower is better)
Translates to: IDVDPGSTPPTL*PETSTSPSPIF
Trigger: AAATATGGGGCTGGGGGAAGTGCTTGTCTCTGGCCATAGAGTGGGTGGAGTAGAACCCGGATCTACGTCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GAGATCCGAGATGGGCAGGCCAAGCAGGCCACTATCTaGAAGCTCCGGAGCCGAAGTCACTGTTCTTGTTAT +
Preference number: 6 (lower is better)
Translates to: EIRDGQAKQATI*KLRSRSHCSCY
Trigger: ATAACAAGAACAGTGACTTCGGCTCCGGAGCTTCAAGATAGTGGCCTGCTTGGCCTGCCCATCTCGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000477903.1
ENST00000478225.5
ENST00000682384.1
CDS CAA 90 bp AGGAGACCGACTACCCCAGGTCCAGGCGCCAGTGGACACACTGCTTaGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RRPTTPGPGASGHTA*LFLLLDPPHPYLVW
Trigger: CCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCCTGGACCTGGGGTAGTCGGTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp GGTGAACAGAGAGATCTGATGCAGGCCCCGCTTCCCTaGTCCTATGGGACGAAGTTGACTCTTACTCCAAGT +
Preference number: 6 (lower is better)
Translates to: GEQRDLMQAPLP*SYGTKLTLTPS
Trigger: ACTTGGAGTAAGAGTCAACTTCGTCCCATAGGATCAGGGAAGCGGGGCCTGCATCAGATCTCTCTGTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp AGTCCTCGTCCCCAGAGCTGGAGAGAACGATCTCGATaGTCACTTCTTCATCCAGGCTGTTCTCTAGAGATC +
Preference number: 6 (lower is better)
Translates to: SPRPQSWRERSR*SLLHPGCSLEI
Trigger: GATCTCTAGAGAACAGCCTGGATGAAGAAGTGACCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294753.8
ENST00000461277.2
ENST00000462139.1
ENST00000682384.1
CDS CCA 72 bp ATACAACAGAAATCTGTTCCTCACAGTTCTGGAGGCTaGACGTCCAAGATCAAGGTGCCAGCAGGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: IQQKSVPHSSGG*TSKIKVPAGWV
Trigger: CACCCAGCCTGCTGGCACCTTGATCTTGGACGTCCAGCCTCCAGAACTGTGAGGAACAGATTTCTGTTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp CACACCAAGTCTCTGAACGCTTGTTCCAGGTGGGGATaGTGTGTCAAAACCTTGTCTGCTTCATGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: HTKSLNACSRWG*CVKTLSASCQL
Trigger: GAGCTGGCATGAAGCAGACAAGGTTTTGACACACCATCCCCACCTGGAACAAGCGTTCAGAGACTTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp CTGCACCACACCAAGTCTCTGAACGCTTGTTCCAGGTaGGGATGGTGTGTCAAAACCTTGTCTGCTTCATGC +
Preference number: 6 (lower is better)
Translates to: LHHTKSLNACSR*GWCVKTLSASC
Trigger: GCATGAAGCAGACAAGGTTTTGACACACCATCCCCACCTGGAACAAGCGTTCAGAGACTTGGTGTGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp ACAGGAGCTACTGCACCACACCAAGTCTCTGAACGCTaGTTCCAGGTGGGGATGGTGTGTCAAAACCTTGTC +
Preference number: 6 (lower is better)
Translates to: TGATAPHQVSER*FQVGMVCQNLV
Trigger: GACAAGGTTTTGACACACCATCCCCACCTGGAACAAGCGTTCAGAGACTTGGTGTGGTGCAGTAGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp CACCAGCGTGCTCGCCCCTCAATGCAGAGATTCCTAAAGTTTATGTaGTTGCACGTTACCAACATGCCCACCCTTCCGTGCAGGGATTTC +
Preference number: 6 (lower is better)
Translates to: HQRARPSMQRFLKFM*LHVTNMPTLPCRDF
Trigger: GAAATCCCTGCACGGAAGGGTGGGCATGTTGGTAACGTGCAACAACATAAACTTTAGGAATCTCTGCATTGAGGGGCGAGCACGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp CAGCGTGCTCGCCCCTCAATGCAGAGATTCCTAAAGTTTATGTTGTaGCACGTTACCAACATGCCCACCCTTCCGTGCAGGGATTTCTCA +
Preference number: 6 (lower is better)
Translates to: QRARPSMQRFLKFML*HVTNMPTLPCRDFS
Trigger: TGAGAAATCCCTGCACGGAAGGGTGGGCATGTTGGTAACGTGCAACAACATAAACTTTAGGAATCTCTGCATTGAGGGGCGAGCACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp CCAGGTCCAGGCGCCAGTGGACACACTGCTTTGTTATTTCTGCTCTaGGATCCACCTCATCCCTATCTTGTTTGGCAAAATCCACATGGC +
Preference number: 6 (lower is better)
Translates to: PGPGASGHTALLFLL*DPPHPYLVWQNPHG
Trigger: GCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCCTGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp AGAGATGGTACAGGAGCTACTGCACCACACCAAGTCTCTGAACGCTaGTTCCAGGTGGGGATGGTGTGTCAAAACCTTGTCTGCTTCATG +
Preference number: 6 (lower is better)
Translates to: RDGTGATAPHQVSER*FQVGMVCQNLVCFM
Trigger: CATGAAGCAGACAAGGTTTTGACACACCATCCCCACCTGGAACAAGCGTTCAGAGACTTGGTGTGGTGCAGTAGCTCCTGTACCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp CTTGGTCAAAAGACAGGTGTCTTCTGTGTCCTTACATaGTGGAGAGGGCAAGGGAGTTCTCTGGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: LGQKTGVFCVLT*WRGQGSSLGPL
Trigger: AAGAGGCCCCAGAGAACTCCCTTGCCCTCTCCATCATGTAAGGACACAGAAGACACCTGTCTTTTGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp CGAGCTAGGTGTCTCAGTCTTAGTCCACTGAGGCTGTaGCAACACAACGCTGTAGGACGGGCAGTTTCTATA +
Preference number: 6 (lower is better)
Translates to: RARCLSLSPLRL*QHNAVGRAVSI
Trigger: TATAGAAACTGCCCGTCCTACAGCGTTGTGTTGTCACAGCCTCAGTGGACTAAGACTGAGACACCTAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp AGATGGTACAGGAGCTACTGCACCACACCAAGTCTCTaGACGCTTGTTCCAGGTGGGGATGGTGTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: RWYRSYCTTPSL*TLVPGGDGVSK
Trigger: TTTTGACACACCATCCCCACCTGGAACAAGCGTTCAGAGACTTGGTGTGGTGCAGTAGCTCCTGTACCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp ACCTGCAGCTCCTCACGTTTCCTTCTTTCTTCTACCTaGAATGGCTGGAGACTTGGAGAGTCTTTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: TCSSSRFLLSST*NGWRLGESFQR
Trigger: CCTCTGGAAAGACTCTCCAAGTCTCCAGCCATTCCAGGTAGAAGAAAGAAGGAAACGTGAGGAGCTGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp CGCCCCTCAATGCAGAGATTCCTAAAGTTTATGTTGTaGCACGTTACCAACATGCCCACCCTTCCGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RPSMQRFLKFML*HVTNMPTLPCR
Trigger: CCTGCACGGAAGGGTGGGCATGTTGGTAACGTGCAACAACATAAACTTTAGGAATCTCTGCATTGAGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GCTCGCCCCTCAATGCAGAGATTCCTAAAGTTTATGTaGTTGCACGTTACCAACATGCCCACCCTTCCGTGC +
Preference number: 6 (lower is better)
Translates to: ARPSMQRFLKFM*LHVTNMPTLPC
Trigger: GCACGGAAGGGTGGGCATGTTGGTAACGTGCAACAACATAAACTTTAGGAATCTCTGCATTGAGGGGCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp ATTTCTGCTCTTGGATCCACCTCATCCCTATCTTGTTaGGCAAAATCCACATGGCAGCTACCTGGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: ISALGSTSSLSC*AKSTWQLPGWV
Trigger: CACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp TGCTTTGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTTGTTaGGCAAAATCCACATGGCAGCTACCTGGCTGGGTGGCCAAGGAT +
Preference number: 6 (lower is better)
Translates to: CFVISALGSTSSLSC*AKSTWQLPGWVAKD
Trigger: ATCCTTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp ACACTGCTTTGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTaGTTTGGCAAAATCCACATGGCAGCTACCTGGCTGGGTGGCCAA +
Preference number: 6 (lower is better)
Translates to: TLLCYFCSWIHLIPI*FGKIHMAATWLGGQ
Trigger: TTGGCCACCCAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp GAGCTGCTGATGATTCTGTACAAAGCTATTTCCTCCTaGAGGAGCAGATGCTTCGAAGCACCATGGCATGGA +
Preference number: 6 (lower is better)
Translates to: ELLMILYKAISS*RSRCFEAPWHG
Trigger: TCCATGCCATGGTGCTTCGAAGCATCTGCTCCTTCAGGAGGAAATAGCTTTGTACAGAATCATCAGCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp AGTTTCTATACAACAGAAATCTGTTCCTCACAGTTCTaGAGGCTGGACGTCCAAGATCAAGGTGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SFYTTEICSSQF*RLDVQDQGASR
Trigger: CCTGCTGGCACCTTGATCTTGGACGTCCAGCCTCCAGAACTGTGAGGAACAGATTTCTGTTGTATAGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GCCCACCCTTCCGTGCAGGGATTTCTCAAGTTTATGTaGCACATGTGCAACGTAGTCTACAAAAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: AHPSVQGFLKFM*HMCNVVYKSCF
Trigger: GAAGCAGCTTTTGTAGACTACGTTGCACATGTGCAACATAAACTTGAGAAATCCCTGCACGGAAGGGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp TACCAACATGCCCACCCTTCCGTGCAGGGATTTCTCAAGTTTATGTaGCACATGTGCAACGTAGTCTACAAAAGCTGCTTCACTGAAGCA +
Preference number: 6 (lower is better)
Translates to: YQHAHPSVQGFLKFM*HMCNVVYKSCFTEA
Trigger: TGCTTCAGTGAAGCAGCTTTTGTAGACTACGTTGCACATGTGCAACATAAACTTGAGAAATCCCTGCACGGAAGGGTGGGCATGTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp ATGTTGTTGCACGTTACCAACATGCCCACCCTTCCGTaGAGGGATTTCTCAAGTTTATGTTGCACATGTGCA +
Preference number: 6 (lower is better)
Translates to: MLLHVTNMPTLP*RDFSSLCCTCA
Trigger: TGCACATGTGCAACATAAACTTGAGAAATCCCTGCACGGAAGGGTGGGCATGTTGGTAACGTGCAACAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp GGAAAAATTGATTTGTTTTGCACCTACAGCACTACCTaGGAGGGTGCTATCCGAATAGATGCCAGGCTACGA +
Preference number: 6 (lower is better)
Translates to: GKIDLFCTYSTT*EGAIRIDARLR
Trigger: TCGTAGCCTGGCATCTATTCGGATAGCACCCTCCCAGGTAGTGCTGTAGGTGCAAAACAAATCAATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp TGTTATTTCTGCTCTTGGATCCACCTCATCCCTATCTaGTTTGGCAAAATCCACATGGCAGCTACCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CYFCSWIHLIPI*FGKIHMAATWL
Trigger: CAGCCAGGTAGCTGCCATGTGGATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GGCGCCAGTGGACACACTGCTTTGTTATTTCTGCTCTaGGATCCACCTCATCCCTATCTTGTTTGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: GASGHTALLFLL*DPPHPYLVWQN
Trigger: ATTTTGCCAAACAAGATAGGGATGAGGTGGATCCAAGAGCAGAAATAACAAAGCAGTGTGTCCACTGGCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 72 bp GATGGAAGAGAAATGGACATACAGCACATGTTCTATTaGGTTCTGATAAGCCTGATGTGGCGAGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: DGREMDIQHMFY*VLISLMWRDSR
Trigger: CCTGCTGTCTCGCCACATCAGGCTTATCAGAACCAAATAGAACATGTGCTGTATGTCCATTTCTCTTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp TCCGTGCAGGGATTTCTCAAGTTTATGTTGCACATGTaGAACGTAGTCTACAAAAGCTGCTTCACTGAAGCA +
Preference number: 6 (lower is better)
Translates to: SVQGFLKFMLHM*NVVYKSCFTEA
Trigger: TGCTTCAGTGAAGCAGCTTTTGTAGACTACGTTGCACATGTGCAACATAAACTTGAGAAATCCCTGCACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CCA 72 bp CAGAGGAGAAAGACATTCCTATTATTTCCCAGTCCTTaGCCAAGGGAGTACAATTCCAATGCCTGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: QRRKTFLLFPSP*PREYNSNAWQN
Trigger: ATTTTGCCAGGCATTGGAATTGTACTCCCTTGGCCAAGGACTGGGAAATAATAGGAATGTCTTTCTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp TACTTACAGGCAGAGGAGAAAGACATTCCTATTATTTCCCAGTCCTaGGCCAAGGGAGTACAATTCCAATGCCTGGCAAAATTAAGATCC +
Preference number: 6 (lower is better)
Translates to: YLQAEEKDIPIISQS*AKGVQFQCLAKLRS
Trigger: GGATCTTAATTTTGCCAGGCATTGGAATTGTACTCCCTTGGCCAAGGACTGGGAAATAATAGGAATGTCTTTCTCCTCTGCCTGTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS CAA 90 bp ATCACTTCTCTCTTTTCACATTTCACAAGCTGCACCTTCAAAACCTaGCTTAGATATTTCTGCAGCCAAATATCCAATTGCAGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: ITSLFSHFTSCTFKT*LRYFCSQISNCSGP
Trigger: CGGGCCACTGCAATTGGATATTTGGCTGCAGAAATATCTAAGCAAGGTTTTGAAGGTGCAGCTTGTGAAATGTGAAAAGAGAGAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp CACAAAACACTAATACATAAGCACAGTTCAGCCAAGTaGTTTGCCACTATAAGAAGGATGGCCTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HKTLIHKHSSAK*FATIRRMAFPP
Trigger: TGGAGGAAAGGCCATCCTTCTTATAGTGGCAAATCACTTGGCTGAACTGTGCTTATGTATTAGTGTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp GCACAATTCTACCTGACACAAAATTCTCTCCAGCTGTaGACCTGTGAAATGAAACAAGTTATGTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: AQFYLTQNSLQL*TCEMKQVMCLP
Trigger: TGGAAGGCACATAACTTGTTTCATTTCACAGGTTCACAGCTGGAGAGAATTTTGTGTCAGGTAGAATTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS TCA 72 bp GCACATGTGCAACGTAGTCTACAAAAGCTGCTTCACTaGAGCATTGATCTAATAAATACTGAAAACCTTGAC +
Preference number: 6 (lower is better)
Translates to: AHVQRSLQKLLH*SIDLINTENLD
Trigger: GTCAAGGTTTTCAGTATTTATTAGATCAATGCTTCAGTGAAGCAGCTTTTGTAGACTACGTTGCACATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1
CDS GCA 72 bp TCTTTTCACATTTCACAAGCTGCACCTTCAAAACCTTaGTTAGATATTTCTGCAGCCAAATATCCAATTGCA +
Preference number: 6 (lower is better)
Translates to: SFHISQAAPSKP*LDISAAKYPIA
Trigger: TGCAATTGGATATTTGGCTGCAGAAATATCTAAGCAAGGTTTTGAAGGTGCAGCTTGTGAAATGTGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462139.1