RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF490 (Homo sapiens)

Ensembl gene IDs: ENSG00000188033

Ensembl transcript IDs: ENST00000311437.11, ENST00000414906.5, ENST00000465656.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTaGATCTCCACAGTAGCCGTCACTTCCACTGAGGCCTCATCTGCC +
Preference number: 1 (lower is better)
Translates to: EAKVCISWLSHQVLH*ISTVAVTSTEASSA
Trigger: GGCAGATGAGGCCTCAGTGGAAGTGACGGCTACTGTGGAGATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 90 bp AGCGGGAGGCTAGGAAACCAGTCCTGGAGCAGGATGCATGTGACATaGACTGACGTGAGAAGGCCGGAGCATCATCAGTGCATATGCCGC +
Preference number: 1 (lower is better)
Translates to: SGRLGNQSWSRMHVT*TDVRRPEHHQCICR
Trigger: GCGGCATATGCACTGATGATGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAGCCTCCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 90 bp GAGAAGCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTaGCTCAGCCACCAGGTCCTCCACTGCATCTCCACAGTAGCCGTC +
Preference number: 1 (lower is better)
Translates to: EKRMFLVREAKVCIS*LSHQVLHCISTVAV
Trigger: GACGGCTACTGTGGAGATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGCTTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 90 bp GACACCAGCACCTCCCATACACAACAGAGCTGGAGCGCTGCAGGGTaGGTCCTTTTCCAAGAAGAGCTAAGTGCTAGTCTTAGCGGGAGG +
Preference number: 1 (lower is better)
Translates to: DTSTSHTQQSWSAAG*VLFQEELSASLSGR
Trigger: CCTCCCGCTAAGACTAGCACTTAGCTCTTCTTGGAAAAGGACCCACCCTGCAGCGCTCCAGCTCTGTTGTGTATGGGAGGTGCTGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp CTTCTGGGACCCACCCAGGGAGACTGTTGTTACGAGGGTGGATGGTaGCCTGGTTTCCCTCAATGCTGCCACCTCCCTTCTAAAACACAC +
Preference number: 1 (lower is better)
Translates to: LLGPTQGDCCYEGGW*PGFPQCCHLPSKTH
Trigger: GTGTGTTTTAGAAGGGAGGTGGCAGCATTGAGGGAAACCAGGTCACCATCCACCCTCGTAACAACAGTCTCCCTGGGTGGGTCCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 90 bp GAAGAGCTAAGTGCTAGTCTTAGCGGGAGGCTAGGAAACCAGTCCTaGAGCAGGATGCATGTGACATGCACTGACGTGAGAAGGCCGGAG +
Preference number: 1 (lower is better)
Translates to: EELSASLSGRLGNQS*SRMHVTCTDVRRPE
Trigger: CTCCGGCCTTCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAGCCTCCCGCTAAGACTAGCACTTAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp GAGGCTAGGAAACCAGTCCTGGAGCAGGATGCATGTGACATGCACTaGCGTGAGAAGGCCGGAGCATCATCAGTGCATATGCCGCTGAAT +
Preference number: 1 (lower is better)
Translates to: EARKPVLEQDACDMH*REKAGASSVHMPLN
Trigger: ATTCAGCGGCATATGCACTGATGATGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp TTGCCTTGTGATGTGAAGCAAGGTAGTTCCATGGCTTGTGAACCCTaGCACCAGCACCTCCCATACACAACAGAGCTGGAGCGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: LPCDVKQGSSMACEP*HQHLPYTTELERCR
Trigger: CCTGCAGCGCTCCAGCTCTGTTGTGTATGGGAGGTGCTGGTGTCAGGGTTCACAAGCCATGGAACTACCTTGCTTCACATCACAAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp CATACTACCATAAATGTTCCTGGTGAGAGAAGCGAATGTTCCTGGTaGGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCC +
Preference number: 1 (lower is better)
Translates to: HTTINVPGERSECSW*EKRRCASPGSATRS
Trigger: GGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGCTTCTCTCACCAGGAACATTTATGGTAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 90 bp GGGACTGACTCCAACAAAGGACAGACCCGACCCCTATCGTGCCTATaGAATTCAGAAAACGGAGAATTCGGAGGCTCCAGCAAGCAGTTT +
Preference number: 1 (lower is better)
Translates to: GTDSNKGQTRPLSCL*NSENGEFGGSSKQF
Trigger: AAACTGCTTGCTGGAGCCTCCGAATTCTCCGTTTTCTGAATTGCATAGGCACGATAGGGGTCGGGTCTGTCCTTTGTTGGAGTCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp TGCACTGACGTGAGAAGGCCGGAGCATCATCAGTGCATATGCCGCTaGATATCTCAGGGTAGAATGTGCCAGAAAACAGGGAAAGCAAGT +
Preference number: 1 (lower is better)
Translates to: CTDVRRPEHHQCICR*ISQGRMCQKTGKAS
Trigger: ACTTGCTTTCCCTGTTTTCTGGCACATTCTACCCTGAGATATTCAGCGGCATATGCACTGATGATGCTCCGGCCTTCTCACGTCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 90 bp CAGCAAGCAGTTTATTGGGAGTTGAGTTCACCTTGCCTTGTGATGTaGAGCAAGGTAGTTCCATGGCTTGTGAACCCTGACACCAGCACC +
Preference number: 1 (lower is better)
Translates to: QQAVYWELSSPCLVM*SKVVPWLVNPDTST
Trigger: GGTGCTGGTGTCAGGGTTCACAAGCCATGGAACTACCTTGCTTCACATCACAAGGCAAGGTGAACTCAACTCCCAATAAACTGCTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 90 bp TGGCTCCTCGGGAATAACCACCACAGTGCCTTATATATCCTTGCTTaGTTTCGTGTCTTCCAGAATGCCAGGATCAAGGGGACAGAGATA +
Preference number: 1 (lower is better)
Translates to: WLLGNNHHSALYILA*FRVFQNARIKGTEI
Trigger: TATCTCTGTCCCCTTGATCCTGGCATTCTGGAAGACACGAAAGCAAGCAAGGATATATAAGGCACTGTGGTGGTTATTCCCGAGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 90 bp CCATACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTaGAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTAAAT +
Preference number: 1 (lower is better)
Translates to: PYIRSFSVHGVHSHI*NPAGECKFLPHLLN
Trigger: ATTTAACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 90 bp CAAGTTAGGGGAGGTAAGAATTCTGAGTGTCCTACAGCTAAGACATaGCAGAGTGTGTCTGTGACTCCACTAGCAGTTTTGAGATTATTC +
Preference number: 1 (lower is better)
Translates to: QVRGGKNSECPTAKT*QSVSVTPLAVLRLF
Trigger: GAATAATCTCAAAACTGCTAGTGGAGTCACAGACACACTCTGCCATGTCTTAGCTGTAGGACACTCAGAATTCTTACCTCCCCTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCGGCAGGTGGATTACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: REAKVCISWLSHQVLHCIGRWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTAATCCACCTGCC...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCGACTGTGGTGGTTGGTaGAGGGCTGGTAACCGCAGG +
Preference number: 2 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSDCGGW*RAGNRR
Trigger: CCTGCGGTTACCAGCCCTGCACCAACCACCACAGTC...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACGTGGTTTTGGATGCTaGCACCTGACCCATCCCTGC +
Preference number: 2 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPRGFGC*HLTHPC
Trigger: GCAGGGATGGGTCAGGTGGCAGCATCCAAAACCACG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCCTCTCCAGTCATGTGTaGGAGCTGAGGGCAGGCACT +
Preference number: 2 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSLSSHV*ELRAGT
Trigger: AGTGCCTGCCCTCAGCTCTCACACATGACTGGAGAG...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCACCTCAGAGCCACCTaGGGTTGCCACAGAGAAATT +
Preference number: 2 (lower is better)
Translates to: REAKVCISWLSHQVLHCIHLRAT*GCHREI
Trigger: AATTTCTCTGTGGCAACCGCAGGTGGCTCTGAGGTG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCTACGAGGGTGGATGGTaGCCTGGTTTCCCTCAATGC +
Preference number: 2 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSYEGGW*PGFPQC
Trigger: GCATTGAGGGAAACCAGGTCACCATCCACCCTCGTA...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCAGAGCCACCTGCGGTTaGCACAGAGAAATTCAGATG +
Preference number: 2 (lower is better)
Translates to: REAKVCISWLSHQVLHCIRATCG*HREIQM
Trigger: CATCTGAATTTCTCTGTGGCAACCGCAGGTGGCTCT...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACCTGGTTTCCCTCAATaGTGCCACCTCCCTTCTAAA +
Preference number: 2 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPPGFPQ*CHLPSK
Trigger: TTTAGAAGGGAGGTGGCAGCATTGAGGGAAACCAGG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTTTCCCTCAATGCTaGCACCTCCCTTCTAAAACA +
Preference number: 2 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPGFPQC*HLPSKT
Trigger: TGTTTTAGAAGGGAGGTGGCAGCATTGAGGGAAACC...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAGCATGTGACATGCACTaGCGTGAGAAGGCCGGAGCA +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIACDMH*REKAGA
Trigger: TGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGC...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAAAAGATTACGTGAAGTaGAGGCTTTCCTACACTCCA +
Preference number: 2 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPKDYVK*RLSYTP
Trigger: TGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTT...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACCGCAGGAGAGTGGATaGTGTGTGGTCAAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIPQESG*CVVKGC
Trigger: ACACCCCTTGACCACACAGCATCCACTCTCCTGCGG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGAACAGAGCTGGAGCGCTaGAGGGTGGGTCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: TYHKRWLLEPILTVKESRTELER*RVGPFP
Trigger: TGGAAAAGGACCCACCCTGCAGCGCTCCAGCTCTGT...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACATACACAACAGAGCTaGAGCGCTGCAGGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: TYHKRWLLEPILTVKESRHTQQS*SAAGWV
Trigger: GACCCACCCTGCAGCGCTCCAGCTCTGTTGTGTATG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAAATCCCGCAGGAGAGTaGAAGTTCCTCCCCCATTTG +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTINPAGE*KFLPHL
Trigger: CAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATT...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATATCTTCACCGTGGTTTTaGATGCTGCCACCTGACCCA +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTISSPWF*MLPPDP
Trigger: TGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGA...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 90 bp AATTCGGAGGCTCCAGCAAGCAGTTTATTGGGAGTTGAGTTCACCTaGCCTTGTGATGTGAAGCAAGGTAGTTCCATGGCTTGTGAACCC +
Preference number: 2 (lower is better)
Translates to: NSEAPASSLLGVEFT*PCDVKQGSSMACEP
Trigger: GGGTTCACAAGCCATGGAACTACCTTGCTTCACATCACAAGGCAAGGTGAACTCAACTCCCAATAAACTGCTTGCTGGAGCCTCCGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACTGTTGTTACGAGGGTaGATGGTGACCTGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: TYHKRWLLEPILTVKESRLLLRG*MVTWFP
Trigger: GGGAAACCAGGTCACCATCCACCCTCGTAACAACAG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAGTGTTTCCTAACTTCTaGCTGGATGCCACAAAAGGC +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIVFPNF*LDATKG
Trigger: GCCTTTTGTGGCATCCAGTCAGAAGTTAGGAAACAC...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATACAGTGCATATGCCGCTaGATATCTCAGGGTAGAATG +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIQCICR*ISQGRM
Trigger: CATTCTACCCTGAGATATTCAGCGGCATATGCACTG...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACCTTGCCTTGTGATGTaGAGCAAGGTAGTTCCATGG +
Preference number: 2 (lower is better)
Translates to: TYHKRWLLEPILTVKESRPCLVM*SKVVPW
Trigger: CCATGGAACTACCTTGCTTCACATCACAAGGCAAGG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAGTAAAACGAACAATTTaGGAGGCCAAGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIVKRTI*EAKVGG
Trigger: TCCACCCACCTTGGCCTCCCAAATTGTTCGTTTTAC...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 90 bp CCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTAAATATTTCATaGCCGCATGAGTCACGTCTTCAAAGGGAATTAGGACAACTGAAG +
Preference number: 2 (lower is better)
Translates to: PAGECKFLPHLLNIS*PHESRLQRELGQLK
Trigger: CTTCAGTTGTCCTAATTCCCTTTGAAGACGTGACTCATGCGGCAATGAAATATTTAACAAATGGGGGAGGAACTTGCACTCTCCTGCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 90 bp GCAATTCAGAAAACGGAGAATTCGGAGGCTCCAGCAAGCAGTTTATaGGGAGTTGAGTTCACCTTGCCTTGTGATGTGAAGCAAGGTAGT +
Preference number: 2 (lower is better)
Translates to: AIQKTENSEAPASSL*GVEFTLPCDVKQGS
Trigger: ACTACCTTGCTTCACATCACAAGGCAAGGTGAACTCAACTCCCAATAAACTGCTTGCTGGAGCCTCCGAATTCTCCGTTTTCTGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATATATTTCATTGCCGCATaGGTCACGTCTTCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIYFIAA*VTSSKG
Trigger: TCCCTTTGAAGACGTGACTCATGCGGCAATGAAATA...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATCCACAAAAGGCCTGCTaGGGCCCAAGTCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDPQKAC*GPSPSS
Trigger: GGAAGAAGGACTTGGGCCCCAGCAGGCCTTTTGTGG...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACCTACAGCTAAGACATaGCAGAGTGTGTCTGTGACT +
Preference number: 2 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIPTAKT*QSVSVT
Trigger: AGTCACAGACACACTCTGCCATGTCTTAGCTGTAGG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGCTCCAGTCGGCCTCTaGACCCTAGTATCTTCACCG +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDAPVGL*TLVSSP
Trigger: CGGTGAAGATACTAGGGTCCAGAGGCCGACTGGAGC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGGGCAGGCAGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMGRQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCC...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGGAGGCAGGATTGCTTTaGCCTGGGAGGCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMEAGLL*PGRQRL
Trigger: CAACCTCTGCCTCCCAGGTCAAAGCAATCCTGCCTC...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTAGCATTCCCACAGTCTaGCCCGAGGACACTGATGGA +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCSIPTV*PEDTDG
Trigger: TCCATCAGTGTCCTCGGGTCAGACTGTGGGAATGCT...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAGTCCATTCACATATCTaGAATCCCGCAGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIVHSHI*NPAGEC
Trigger: GCACTCTCCTGCGGGATTGCAGATATGTGAATGGAC...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTATGCCACAAAAGGCCTaGTGGGGCCCAAGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCMPQKA*WGPSPS
Trigger: AGAAGGACTTGGGCCCCAGCAGGCCTTTTGTGGCAT...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTGTAACCGCAGGAGAGTaGATGCTGTGTGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCVTAGE*MLCGQG
Trigger: CCCTTGACCACACAGCATCCACTCTCCTGCGGTTAC...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAGCAAGGTAGTTCCATaGCTTGTGAACCCTGACACC +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDSKVVP*LVNPDT
Trigger: GGTGTCAGGGTTCACAAGCCATGGAACTACCTTGCT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTAGGATGCATGTGACATaGACTGACGTGAGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCRMHVT*TDVRRP
Trigger: CGGCCTTCTCACGTCAGTGCATGTCACATGCATCCT...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTCTGACCCGAGGACACTaGTGGAAACTTAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCLTRGH*WKLKRQ
Trigger: CTGCCTTTTAAGTTTCCATCAGTGTCCTCGGGTCAG...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGTTTTGAGATTATTCTaGCTGTGGTGGTTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDVLRLF*LWWLVQ
Trigger: CTGCACCAACCACCACAGTCAGAATAATCTCAAAAC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAGTGTAGGTTTGAGATaGGAAATGGAGCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDSVGLR*EMELEM
Trigger: CATCTCCAGCTCCATTTCCCATCTCAAACCTACACT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTGGCAGCTCAAGAATGTaGAAGGACCTGAAATGGGTT +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCGSSRM*KDLKWV
Trigger: AACCCATTTCAGGTCCTTTCACATTCTTGAGCTGCC...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR GCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTCCCCTATCGTGCCTATaGAATTCAGAAAACGGAGAA +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCPLSCL*NSENGE
Trigger: TTCTCCGTTTTCTGAATTGCATAGGCACGATAGGGG...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAATATAAAAATTAGTTaGGCGTGGTGGCATGTGCCT +
Preference number: 2 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDNIKIS*AWWHVP
Trigger: AGGCACATGCCACCACGCCCAACTAATTTTTATATT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR TCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTGGTTGCAGATGTCATTaGAGATGTTCCCATATTGCT +
Preference number: 2 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCGCRCH*RCSHIA
Trigger: AGCAATATGGGAACATCTTCAATGACATCTGCAACC...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGACCCATCCCTGCTGTaGGGGGAGGGTGGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPDPSLL*GEGGGQ
Trigger: CTGGCCTCCACCCTCCCCCAACAGCAGGGATGGGTC...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp GTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTaGATCTCCACAGTAGCCGTCACTTCCACTGAGGCC +
Preference number: 3 (lower is better)
Translates to: VCISWLSHQVLH*ISTVAVTSTEA
Trigger: GGCCTCAGTGGAAGTGACGGCTACTGTGGAGATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp ATGCCAGCTACTAGGGGGCCTGAGGCAGGATTGCTTTaGCCTGGGAGGCAGAGGTTGCGCCACTTTCACTCC +
Preference number: 3 (lower is better)
Translates to: MPATRGPEAGLL*PGRQRLRHFHS
Trigger: GGAGTGAAAGTGGCGCAACCTCTGCCTCCCAGGTCAAAGCAATCCTGCCTCAGGCCCCCTAGTAGCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 72 bp GCTCCAGTCGGCCTCTGGACCCTAGTATCTTCACCGTaGTTTTGGATGCTGCCACCTGACCCATCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: APVGLWTLVSSP*FWMLPPDPSLL
Trigger: CAGCAGGGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAGGCCGACTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp CCCACCCAGGGAGACTGTTGTTACGAGGGTGGATGGTaGCCTGGTTTCCCTCAATGCTGCCACCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PTQGDCCYEGGW*PGFPQCCHLPS
Trigger: AGAAGGGAGGTGGCAGCATTGAGGGAAACCAGGTCACCATCCACCCTCGTAACAACAGTCTCCCTGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp GAGAAGCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTaGATCTCCTGGCTCAGCCACCAGGTCCTCCACTGC +
Preference number: 3 (lower is better)
Translates to: EKRMFLVREAKV*ISWLSHQVLHC
Trigger: GCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGCTTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 72 bp TCTGGGACCCACCCAGGGAGACTGTTGTTACGAGGGTaGATGGTGACCTGGTTTCCCTCAATGCTGCCACCT +
Preference number: 3 (lower is better)
Translates to: SGTHPGRLLLRG*MVTWFPSMLPP
Trigger: AGGTGGCAGCATTGAGGGAAACCAGGTCACCATCCACCCTCGTAACAACAGTCTCCCTGGGTGGGTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCAGAGCCACCTGCGGTaGCCACAGAGAAATTCAGAT +
Preference number: 3 (lower is better)
Translates to: REAKVCISWLSHQVLHCIQSHLR*PQRNSD
Trigger: ATCTGAATTTCTCTGTGGCAACCGCAGGTGGCTCTG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp CACCAGCACCTCCCATACACAACAGAGCTGGAGCGCTaGAGGGTGGGTCCTTTTCCAAGAAGAGCTAAGTGC +
Preference number: 3 (lower is better)
Translates to: HQHLPYTTELER*RVGPFPRRAKC
Trigger: GCACTTAGCTCTTCTTGGAAAAGGACCCACCCTGCAGCGCTCCAGCTCTGTTGTGTATGGGAGGTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 72 bp ATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTaGCTCAGCCACCAGGTCCTCCACTGCATCTCCACA +
Preference number: 3 (lower is better)
Translates to: MFLVREAKVCIS*LSHQVLHCIST
Trigger: TGTGGAGATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp CTAGGAAACCAGTCCTGGAGCAGGATGCATGTGACATaGACTGACGTGAGAAGGCCGGAGCATCATCAGTGC +
Preference number: 3 (lower is better)
Translates to: LGNQSWSRMHVT*TDVRRPEHHQC
Trigger: GCACTGATGATGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCGGAGTTGAGTTCACCTaGCCTTGTGATGTGAAGCAA +
Preference number: 3 (lower is better)
Translates to: REAKVCISWLSHQVLHCIGVEFT*PCDVKQ
Trigger: TTGCTTCACATCACAAGGCAAGGTGAACTCAACTCC...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 72 bp AGTGCTAGTCTTAGCGGGAGGCTAGGAAACCAGTCCTaGAGCAGGATGCATGTGACATGCACTGACGTGAGA +
Preference number: 3 (lower is better)
Translates to: SASLSGRLGNQS*SRMHVTCTDVR
Trigger: TCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAGCCTCCCGCTAAGACTAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAAGGCAGAAGAATTGCTaGAACCCAGAGGTTACAGTG +
Preference number: 3 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPRQKNC*NPEVTV
Trigger: CACTGTAACCTCTGGGTTCAAGCAATTCTTCTGCCT...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAGCTGAGGCAGAAGAATaGCTTGAACCCAGAGGTTAC +
Preference number: 3 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPAEAEE*LEPRGY
Trigger: GTAACCTCTGGGTTCAAGCAATTCTTCTGCCTCAGC...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp AAACCAGTCCTGGAGCAGGATGCATGTGACATGCACTaGCGTGAGAAGGCCGGAGCATCATCAGTGCATATG +
Preference number: 3 (lower is better)
Translates to: KPVLEQDACDMH*REKAGASSVHM
Trigger: CATATGCACTGATGATGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGCATCCTGCTCCAGGACTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp GATGTGAAGCAAGGTAGTTCCATGGCTTGTGAACCCTaGCACCAGCACCTCCCATACACAACAGAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: DVKQGSSMACEP*HQHLPYTTELE
Trigger: CTCCAGCTCTGTTGTGTATGGGAGGTGCTGGTGTCAGGGTTCACAAGCCATGGAACTACCTTGCTTCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp TCCAACAAAGGACAGACCCGACCCCTATCGTGCCTATaGAATTCAGAAAACGGAGAATTCGGAGGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SNKGQTRPLSCL*NSENGEFGGSS
Trigger: GCTGGAGCCTCCGAATTCTCCGTTTTCTGAATTGCATAGGCACGATAGGGGTCGGGTCTGTCCTTTGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CCA 72 bp ACCTCCCATACACAACAGAGCTGGAGCGCTGCAGGGTaGGTCCTTTTCCAAGAAGAGCTAAGTGCTAGTCTT +
Preference number: 3 (lower is better)
Translates to: TSHTQQSWSAAG*VLFQEELSASL
Trigger: AAGACTAGCACTTAGCTCTTCTTGGAAAAGGACCCACCCTGCAGCGCTCCAGCTCTGTTGTGTATGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACACCCAGGGAGACTGTaGTTACGAGGGTGGATGGTG +
Preference number: 3 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIHPGRL*LRGWMV
Trigger: CACCATCCACCCTCGTAACAACAGTCTCCCTGGGTG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp GTGAGAAGGCCGGAGCATCATCAGTGCATATGCCGCTaGATATCTCAGGGTAGAATGTGCCAGAAAACAGGG +
Preference number: 3 (lower is better)
Translates to: VRRPEHHQCICR*ISQGRMCQKTG
Trigger: CCCTGTTTTCTGGCACATTCTACCCTGAGATATTCAGCGGCATATGCACTGATGATGCTCCGGCCTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp CGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTaGAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: RSFSVHGVHSHI*NPAGECKFLPH
Trigger: ATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp ACTGACTCCAACAAAGGACAGACCCGACCCCTATCGTaGCTATGCAATTCAGAAAACGGAGAATTCGGAGGC +
Preference number: 3 (lower is better)
Translates to: TDSNKGQTRPLS*LCNSENGEFGG
Trigger: GCCTCCGAATTCTCCGTTTTCTGAATTGCATAGGCACGATAGGGGTCGGGTCTGTCCTTTGTTGGAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR GCA 72 bp GGGAATAACCACCACAGTGCCTTATATATCCTTGCTTaGTTTCGTGTCTTCCAGAATGCCAGGATCAAGGGG +
Preference number: 3 (lower is better)
Translates to: GNNHHSALYILA*FRVFQNARIKG
Trigger: CCCCTTGATCCTGGCATTCTGGAAGACACGAAAGCAAGCAAGGATATATAAGGCACTGTGGTGGTTATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGAGCAGTTTATTGGGAGTaGAGTTCACCTTGCCTTGTG +
Preference number: 3 (lower is better)
Translates to: TYHKRWLLEPILTVKESRAVYWE*SSPCLV
Trigger: CACAAGGCAAGGTGAACTCAACTCCCAATAAACTGC...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp GTTTATTGGGAGTTGAGTTCACCTTGCCTTGTGATGTaGAGCAAGGTAGTTCCATGGCTTGTGAACCCTGAC +
Preference number: 3 (lower is better)
Translates to: VYWELSSPCLVM*SKVVPWLVNPD
Trigger: GTCAGGGTTCACAAGCCATGGAACTACCTTGCTTCACATCACAAGGCAAGGTGAACTCAACTCCCAATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGAATCTCGACAATGGTaGCAGATGTCATTGAAGATG +
Preference number: 3 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIESRQW*QMSLKM
Trigger: CATCTTCAATGACATCTGCAACCATTGTCGAGATTC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAGTAAAACGAACAATTaGGGAGGCCAAGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDSKTNN*GGQGGW
Trigger: CCACCCACCTTGGCCTCCCAAATTGTTCGTTTTACT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAAAGTTCCTCCCCCATTaGTTAAATATTTCATTGCCG +
Preference number: 3 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAKFLPH*LNISLP
Trigger: CGGCAATGAAATATTTAACAAATGGGGGAGGAACTT...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATCCAGCAAGCAGTTTATaGGGAGTTGAGTTCACCTTG +
Preference number: 3 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDPASSL*GVEFTL
Trigger: CAAGGTGAACTCAACTCCCAATAAACTGCTTGCTGG...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR TCA 72 bp GTTCCTCCCCCATTTGTTAAATATTTCATTGCCGCATaGGTCACGTCTTCAAAGGGAATTAGGACAACTGAA +
Preference number: 3 (lower is better)
Translates to: VPPPFVKYFIAA*VTSSKGIRTTE
Trigger: TTCAGTTGTCCTAATTCCCTTTGAAGACGTGACTCATGCGGCAATGAAATATTTAACAAATGGGGGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATATAGGCAGATCCCACTaGGGGAAAAACTGTAAGATG +
Preference number: 3 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDIGRSH*GKNCKM
Trigger: CATCTTACAGTTTTTCCCCAAGTGGGATCTGCCTAT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATTGGTTGCAGATGTCATaGAAGATGTTCCCATATTGC +
Preference number: 3 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDWLQMS*KMFPYC
Trigger: GCAATATGGGAACATCTTCAATGACATCTGCAACCA...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAACCCATCCCTGCTGTTaGGGGAGGGTGGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPTHPCC*GRVEAR
Trigger: TCTGGCCTCCACCCTCCCCCAACAGCAGGGATGGGT...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACACTTGCTCTGGACTTaGTCCTCGAGGGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPHLLWT*SSRGRS
Trigger: GGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCACCAGGTCCTCCACTaGATCTCCACAGTAGCCGTC +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCIHQVLH*ISTVAV
Trigger: GACGGCTACTGTGGAGATGCAGTGGAGGACCTGGTG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCATGCCACAAAAGGCCTaGTGGGGCCCAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCIMPQKA*WGPSPS
Trigger: AGAAGGACTTGGGCCCCAGCAGGCCTTTTGTGGCAT...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAACAGAGCTGGAGCGCTaGAGGGTGGGTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPTELER*RVGPFP
Trigger: TGGAAAAGGACCCACCCTGCAGCGCTCCAGCTCTGT...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACACCGTGGTTTTGGATaGTGCCACCTGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPHRGFG*CHLTHP
Trigger: GGGATGGGTCAGGTGGCAGCATCCAAAACCACGGTG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACATACACAACAGAGCTaGAGCGCTGCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPHTQQS*SAAGWV
Trigger: GACCCACCCTGCAGCGCTCCAGCTCTGTTGTGTATG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGGAGACCTGATGCATaGAGACTTCCCCACACACAC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPGRPDA*RLPHTH
Trigger: GTGTGTGTGGGGAAGTCTTCATGCATCAGGTCTCCC...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCCCGCAGGAGAGTGGATaGTGTGTGGTCAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSPQESG*CVVKGC
Trigger: ACACCCCTTGACCACACAGCATCCACTCTCCTGCGG...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCATCTGACTGTGGTGGTTaGTGCAGGGCTGGTAACCGC +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPSDCGG*CRAGNR
Trigger: GCGGTTACCAGCCCTGCACCAACCACCACAGTCAGA...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATGGAGCGCTGCAGGGTaGGTCCTTTTCCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPWSAAG*VLFQEE
Trigger: CTCTTCTTGGAAAAGGACCCACCCTGCAGCGCTCCA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAAGCATTCCCACAGTCTaGCCCGAGGACACTGATGGA +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPSIPTV*PEDTDG
Trigger: TCCATCAGTGTCCTCGGGTCAGACTGTGGGAATGCT...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAAATCCCGCAGGAGAGTaGAAGTTCCTCCCCCATTTG +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPNPAGE*KFLPHL
Trigger: CAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATT...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCTCACTGTTCTGCATCTaGAGGACATCAGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCISLFCI*RTSDPP
Trigger: AGGAGGGTCTGATGTCCTCCAGATGCAGAACAGTGA...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAGCTCCATCTGGAAACTaGGACTGGAATTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPAPSGN*DWNSCA
Trigger: TGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGC...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCTTCACAGGAACTAGATaGCTTGAAGGCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCIFTGTR*LEGFPT
Trigger: TGTGGGGAAGCCTTCAAGTCATCTAGTTCCTGTGAA...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAAGGATGCATGTGACATaGACTGACGTGAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPRMHVT*TDVRRP
Trigger: CGGCCTTCTCACGTCAGTGCATGTCACATGCATCCT...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCGGTTTCCCTCAATGCTaGCACCTCCCTTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCIGFPQC*HLPSKT
Trigger: TGTTTTAGAAGGGAGGTGGCAGCATTGAGGGAAACC...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCCTACAGCTAAGACATaGCAGAGTGTGTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCIPTAKT*QSVSVT
Trigger: AGTCACAGACACACTCTGCCATGTCTTAGCTGTAGG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCTAGTATCTTCACCGTaGTTTTGGATGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCILVSSP*FWMLPP
Trigger: AGGTGGCAGCATCCAAAACCACGGTGAAGATACTAG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 72 bp ACAAAGATCACTTCTGGGACCCACCCAGGGAGACTGTaGTTACGAGGGTGGATGGTGACCTGGTTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TKITSGTHPGRL*LRGWMVTWFPS
Trigger: TGAGGGAAACCAGGTCACCATCCACCCTCGTAACAACAGTCTCCCTGGGTGGGTCCCAGAAGTGATCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCCTGACCCGAGGACACTaGTGGAAACTTAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSLTRGH*WKLKRQ
Trigger: CTGCCTTTTAAGTTTCCATCAGTGTCCTCGGGTCAG...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCACCTTGCCTTGTGATGTaGAGCAAGGTAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPPCLVM*SKVVPW
Trigger: CCATGGAACTACCTTGCTTCACATCACAAGGCAAGG...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATGGTGTTCACTGTTCTaGATCTGGAGGACATCAGAC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPWCSLF*IWRTSD
Trigger: GTCTGATGTCCTCCAGATGCAGAACAGTGAACACCA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAGTCCATTCACATATCTaGAATCCCGCAGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPVHSHI*NPAGEC
Trigger: GCACTCTCCTGCGGGATTGCAGATATGTGAATGGAC...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCCTGAGAAGTGGAGGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSLRSGG*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACCTCCACTTCTCAG...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTGACGACCACTTGCTCTaGACTTGCTCCTCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICDDHLL*TCSSRG
Trigger: ACCCCTCGAGGAGCAAGTCCAGAGCAAGTGGTCGTC...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCAGTGTAGGTTTGAGATaGGAAATGGAGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: REAKVCISWLSHQVLHCISVGLR*EMELEM
Trigger: CATCTCCAGCTCCATTTCCCATCTCAAACCTACACT...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACCTGGGGCAACAGAGTaGGACACCATCTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIPGATE*DTILGC
Trigger: GCACCCCAAGATGGTGTCTCACTCTGTTGCCCCAGG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCACAGTGCATATGCCGCTaGATATCTCAGGGTAGAATG +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPQCICR*ISQGRM
Trigger: CATTCTACCCTGAGATATTCAGCGGCATATGCACTG...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTACGAGGGTGGATGGTaGCCTGGTTTCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICYEGGW*PGFPQC
Trigger: GCATTGAGGGAAACCAGGTCACCATCCACCCTCGTA...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTGCAGTCCAGCTTGGTaGCAGAGCGAGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICCSPAW*QSETVS
Trigger: AGACACAGTCTCGCTCTGTCACCAAGCTGGACTGCA...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACTGGGAGGCAGAGGTTaGGCCACTTTCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRLGGRG*ATFTPA
Trigger: GGCTGGAGTGAAAGTGGCGCAACCTCTGCCTCCCAG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCACCCCTATCGTGCCTATaGAATTCAGAAAACGGAGAA +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPPLSCL*NSENGE
Trigger: TTCTCCGTTTTCTGAATTGCATAGGCACGATAGGGG...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATATCTGCCAGCAAACCTTaGTCCAGTCGGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTISASKP*SSRPLD
Trigger: GTCCAGAGGCCGACTGGAGCAAGGTTTGCTGGCAGA...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATATTGGGGAGACCGAGGTaGGTGGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTILGRPR*VDHKVR
Trigger: CCTGACCTTGTGATCCACCCACCTCGGTCTCCCCAA...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACTCTCCAGTCATGTGTaGGAGCTGAGGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRLSSHV*ELRAGT
Trigger: AGTGCCTGCCCTCAGCTCTCACACATGACTGGAGAG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGAGCATGTGACATGCACTaGCGTGAGAAGGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRACDMH*REKAGA
Trigger: TGCTCCGGCCTTCTCACGTCAGTGCATGTCACATGC...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATTAGCACAGCTTTGTTaGCTACACCTATTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPLAQLC*LHLLEG
Trigger: TCCCTCTAATAGGTGTAGTCAACAAAGCTGTGCTAA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCACCTCAGAGCCACCTaGGGTTGCCACAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICHLRAT*GCHREI
Trigger: AATTTCTCTGTGGCAACCGCAGGTGGCTCTGAGGTG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACACTGCACTCCAGCCTaGGCAAGGACTCCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIHCTPA*ARTPSQ
Trigger: TTGAGACGGAGTCCTTGCCCAGGCTGGAGTGCAGTG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACCACAAAAGGCCTGCTaGGGCCCAAGTCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRPQKAC*GPSPSS
Trigger: GGAAGAAGGACTTGGGCCCCAGCAGGCCTTTTGTGG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAGTAACCGCAGGAGAGTaGATGCTGTGTGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIVTAGE*MLCGQG
Trigger: CCCTTGACCACACAGCATCCACTCTCCTGCGGTTAC...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCTGTTGTTACGAGGGTaGATGGTGACCTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICLLLRG*MVTWFP
Trigger: GGGAAACCAGGTCACCATCCACCCTCGTAACAACAG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTCTTCACCGTGGTTTTaGATGCTGCCACCTGACCCA +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICSSPWF*MLPPDP
Trigger: TGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGA...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGAGCTCCAGTCGGCCTCTaGACCCTAGTATCTTCACCG +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRAPVGL*TLVSSP
Trigger: CGGTGAAGATACTAGGGTCCAGAGGCCGACTGGAGC...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAAAAGATTACGTGAAGTaGAGGCTTTCCTACACTCCA +
Preference number: 4 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPKDYVK*RLSYTP
Trigger: TGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTT...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGAGGCAGGATTGCTTTaGCCTGGGAGGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAEAGLL*PGRQRL
Trigger: CAACCTCTGCCTCCCAGGTCAAAGCAATCCTGCCTC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATTGTCCTTCAAAAAGTaGATGTTCTCACTCCCATTC +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPLSFKK*MFSLPF
Trigger: GAATGGGAGTGAGAACATTCACTTTTTGAAGGACAA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCCTGGTTTCCCTCAATaGTGCCACCTCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICPGFPQ*CHLPSK
Trigger: TTTAGAAGGGAGGTGGCAGCATTGAGGGAAACCAGG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATGCCTTATATATCCTTaGTTGCTTTCGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPCLIYP*LLSCLP
Trigger: TGGAAGACACGAAAGCAAGCAAGGATATATAAGGCA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCACCTCAAAACAGCCCTaGAATAATGCAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSTSKQP*NNAMLT
Trigger: TGTCAGCATTGCATTATTCCAGGGCTGTTTTGAGGT...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTTCTCCAGGTTTCTCTaGCTCCTCGGGAATAACCAC +
Preference number: 4 (lower is better)
Translates to: SIHISAIPQESASSSPICFSRFL*LLGNNH
Trigger: GTGGTTATTCCCGAGGAGCCAGAGAAACCTGGAGAA...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGGAGACCGAGGTGGGTaGATCACAAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIGDRGG*ITRSGD
Trigger: ATCTCCTGACCTTGTGATCCACCCACCTCGGTCTCC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGATTCATGGTTTTAAAATaGACTGGAGGCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRFMVLK*TGGRAR
Trigger: CCGCGCCCGGCCTCCAGTTCATTTTAAAACCATGAA...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATACGCATCCAGAAACACTaGAGGAAGACTTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIRIQKH*RKTSVS
Trigger: GGACACGGAAGTCTTCCTGCAGTGTTTCTGGATGCG...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp CTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACCACTTGCTCTGGACTTaGTCCTCGAGGGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LDALSMVFTVLHLLGTIYHLLWT*SSRGRS
Trigger: GGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTG...GTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR GCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCACTGGGAGGCAGAGATTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPALGGRD*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAATCTCTGCCTCCCAG...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAAATCAGGCAAGAAAATaGAAGCATTCCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTINQARK*KHSSRA
Trigger: GGCCCGGCTGGAATGCTTGCATTTTCTTGCCTGATT...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 72 bp GCTCCAGCAAGCAGTTTATTGGGAGTTGAGTTCACCTaGCCTTGTGATGTGAAGCAAGGTAGTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: APASSLLGVEFT*PCDVKQGSSMA
Trigger: AGCCATGGAACTACCTTGCTTCACATCACAAGGCAAGGTGAACTCAACTCCCAATAAACTGCTTGCTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATACTATTAAGGGAGACCTaGTGCATGAAGACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTILLRET*CMKTSP
Trigger: TGGGGAAGTCTTCATGCATCAGGTCTCCCTTAATAG...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGATCGTGTCTTCCAGAATaGCAGGATCAAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRSCLPE*QDQGDR
Trigger: TCTGTCCCCTTGATCCTGGCATTCTGGAAGACACGA...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATACTGAAACAGGAGAATTaGTTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTILKQEN*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCAATTCTCCTGTTTCAG...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATTCCAGCCGGGCCTGGTaGCTCAAGCCTCTAATCCCA +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDSSRAW*LKPLIP
Trigger: TGGGATTAGAGGCTTGAGCCACCAGGCCCGGCTGGA...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGTTCCTGTGCGGCCTTaGCTAGACGACCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDVPVRP*LDDHLL
Trigger: GAGCAAGTGGTCGTCTAGTCAAGGCCGCACAGGAAC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACAGTTCCTGTGCGGCCTTaGCTAGACGACCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LMLCPWCSLFCIYWVQYTVPVRP*LDDHLL
Trigger: GAGCAAGTGGTCGTCTAGTCAAGGCCGCACAGGAAC...TGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAAACAGGAGAATTGCTTaGACCTGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPINRRIA*TWEAEI
Trigger: AATCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGTT...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGGACTGTGGTGGTTGGTaGAGGGCTGGTAACCGCAGG +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMDCGGW*RAGNRR
Trigger: CCTGCGGTTACCAGCCCTGCACCAACCACCACAGTC...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACTGAGGCAGGAGAATTaGTTGAACCTGAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRLRQEN*LNLRSG
Trigger: TCCACTTCTCAGGTTCAAGCAATTCTCCTGCCTCAG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGGACGACCACTTGCTCTaGACTTGCTCCTCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLDDHLL*TCSSRG
Trigger: ACCCCTCGAGGAGCAAGTCCAGAGCAAGTGGTCGTC...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAAGGTGTGCATCTCCTaGCTCAGCCACCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDKVCIS*LSHQVL
Trigger: GAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGAGATGGAGTCAGTTTaGGTCTTGATGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIEMESV*VLMLCP
Trigger: TGGACAAAGCATCAAGACTCAAACTGACTCCATCTC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGGGGAGACCTGATGCATaGAGACTTCCCCACACACAC +
Preference number: 4 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLGRPDA*RLPHTH
Trigger: GTGTGTGTGGGGAAGTCTTCATGCATCAGGTCTCCC...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGTGTTTTCGAAGGCTTaGGTGAGAAAAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIVFSKA*VRKEGS
Trigger: AGAGCCTTCTTTTCTCACTCAAGCCTTCGAAAACAC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATATATTTCATTGCCGCATaGGTCACGTCTTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIYFIAA*VTSSKG
Trigger: TCCCTTTGAAGACGTGACTCATGCGGCAATGAAATA...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGTGTTTCCTAACTTCTaGCTGGATGCCACAAAAGGC +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAVFPNF*LDATKG
Trigger: GCCTTTTGTGGCATCCAGTCAGAAGTTAGGAAACAC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAATGGCTTGTGAACCCTaGCACCAGCACCTCCCATAC +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIMACEP*HQHLPY
Trigger: GTATGGGAGGTGCTGGTGTCAGGGTTCACAAGCCAT...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACATAAATGTTCCTGGTaGGAGAAGCGAATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TYHKRWLLEPILTVKESRHKCSW*EKRMFL
Trigger: CAGGAACATTCGCTTCTCTCACCAGGAACATTTATG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGGCAGCTCAAGAATGTaGAAGGACCTGAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAGSSRM*KDLKWV
Trigger: AACCCATTTCAGGTCCTTTCACATTCTTGAGCTGCC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCACAAAAGATGGCTCCTTaGGCCCATTCTGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAQKMAP*AHSDSE
Trigger: TTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTG...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAGGGTGGATGGTGACCTaGTTTCCCTCAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIGWMVT*FPSMLP
Trigger: TGGCAGCATTGAGGGAAACCAGGTCACCATCCACCC...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAACTAGCTCGGTATGGTaGCACGCGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSITSSVW*HAPVIP
Trigger: TGGGATTACAGGCGCGTGCCACCATACCGAGCTAGT...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 72 bp CTCAAGGGAGATGGAGTCAGTTTGAGTCTTGATGCTTaGTCCATGGTGTTCACTGTTCTGCATCTATTGGGT +
Preference number: 4 (lower is better)
Translates to: LKGDGVSLSLDA*SMVFTVLHLLG
Trigger: ACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAGACTCAAACTGACTCCATCTCCCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp CTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGCTCCATCTGGAAACTaGGACTGGAATTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LCPWCSLFCIYWVQYTLFAPSGN*DWNSCA
Trigger: TGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGC...AAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGGCTTCTGTCTACTATaGGTCCTTTCGTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDGFCLL*VLSCTC
Trigger: GCACGTGCACGAAAGGACTCATAGTAGACAGAAGCC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGGTGGGTGGATCATTTaGGGTCAAGAGTTTAAGATC +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAGGWII*GQEFKI
Trigger: GATCTTAAACTCTTGACCTCAAATGATCCACCCACC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGTTTTGAGATTATTCTaGCTGTGGTGGTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YIRSFSVHGVHSHICNPAVLRLF*LWWLVQ
Trigger: CTGCACCAACCACCACAGTCAGAATAATCTCAAAAC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAAGCGAATGTTCCTGGTaGGAGAAGCGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSISECSW*EKRRCA
Trigger: TGCACACCTTCGCTTCTCTCACCAGGAACATTCGCT...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGCGCATCCAGAAACACTaGAGGAAGACTTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLRIQKH*RKTSVS
Trigger: GGACACGGAAGTCTTCCTGCAGTGTTTCTGGATGCG...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CCA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATAGAAGAATCTCGACAATaGTTGCAGATGTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIEESRQ*LQMSLK
Trigger: CTTCAATGACATCTGCAACCATTGTCGAGATTCTTC...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGAGAGTGGATGCTGTGTaGTCAAGGGGTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMRVDAV*SRGVCP
Trigger: GGGACACACACCCCTTGACCACACAGCATCCACTCT...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGTCCTGGCTAACACGGTaGAACCCCGTCTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMSWLTR*NPVSTK
Trigger: TTTAGTGGAGACGGGGTTTCACCGTGTTAGCCAGGA...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAAATGGAGCTGGAGATaGCCTCAAAACAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDKWSWR*PQNSPG
Trigger: TCCAGGGCTGTTTTGAGGTCATCTCCAGCTCCATTT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAAGAGCCACCTGCGGTTaGCACAGAGAAATTCAGATG +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIRATCG*HREIQM
Trigger: CATCTGAATTTCTCTGTGGCAACCGCAGGTGGCTCT...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAGGGGTCGCTCCATCTaGAAACTGAGACTGGAATTC +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDRGRSI*KLRLEF
Trigger: GAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACAAGGGGTCGCTCCATCTaGAAACTGAGACTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LMLCPWCSLFCIYWVQYTRGRSI*KLRLEF
Trigger: GAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCT...TGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATACTAGGAAACCAGTCCTaGAGCAGGATGCATGTGACA +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSILGNQS*SRMHVT
Trigger: TGTCACATGCATCCTGCTCCAGGACTGGTTTCCTAG...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATAAGCAAGGTAGTTCCATaGCTTGTGAACCCTGACACC +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSISKVVP*LVNPDT
Trigger: GGTGTCAGGGTTCACAAGCCATGGAACTACCTTGCT...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
3UTR CAA 72 bp GAGTGCAAGTTCCTCCCCCATTTGTTAAATATTTCATaGCCGCATGAGTCACGTCTTCAAAGGGAATTAGGA +
Preference number: 4 (lower is better)
Translates to: ECKFLPHLLNIS*PHESRLQRELG
Trigger: TCCTAATTCCCTTTGAAGACGTGACTCATGCGGCAATGAAATATTTAACAAATGGGGGAGGAACTTGCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp CTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTCTATTAAGGGAGACCTaGTGCATGAAGACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LCPWCSLFCIYWVQYTLFLLRET*CMKTSP
Trigger: TGGGGAAGTCTTCATGCATCAGGTCTCCCTTAATAG...AAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGAATGTGAAAGGACCTaGAATGGGTTGAGTAATAAT +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIECERT*NGLSNN
Trigger: ATTATTACTCAACCCATTTCAGGTCCTTTCACATTC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACATCTTTGGGTGATGGGTaGACTAAAAGCCAGACTTCG +
Preference number: 4 (lower is better)
Translates to: LMLCPWCSLFCIYWVQYTSLGDG*TKSQTS
Trigger: CGAAGTCTGGCTTTTAGTGCACCCATCACCCAAAGA...TGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR GCA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAAAGATGTTCCCATATTaGTTACATTTAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIKMFPY*LHLRRW
Trigger: CCACCTTCTTAAATGTAAGCAATATGGGAACATCTT...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR GCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGACCCGACCCCTATCGTaGCTATGCAATTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMTRPLS*LCNSEN
Trigger: GTTTTCTGAATTGCATAGGCACGATAGGGGTCGGGT...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp CTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACTTGATGCTTTGTCCATaGTGTTCACTGTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LDALSMVFTVLHLLGTIYLMLCP*CSLFCI
Trigger: GATGCAGAACAGTGAACACCATGGACAAAGCATCAA...GTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CCA 90 bp GTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGGGTGATGGGTGCTTAAGATCAGGAATCTaGCTAGTGCTTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: VHCSASIGYNIHSLGDGCLRSGI*LVLFPH
Trigger: ATGTGGAAAAAGCACTAGCCAGATTCCTGATCTTAA...GCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGGTAAAACGAACAATTTaGGAGGCCAAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMVKRTI*EAKVGG
Trigger: TCCACCCACCTTGGCCTCCCAAATTGTTCGTTTTAC...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATCAGCAAGCAGTTTATTaGGAGTTGAGTTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDQQAVY*ELSSPC
Trigger: GCAAGGTGAACTCAACTCCCAATAAACTGCTTGCTG...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGCACGTGCAAAGACTTTaGGTAACTGAAGGCTTTACC +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMHVQRL*VTEGFT
Trigger: GGTAAAGCCTTCAGTTACTCAAAGTCTTTGCACGTG...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGGTTGCAGATGTCATTaGAGATGTTCCCATATTGCT +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDGCRCH*RCSHIA
Trigger: AGCAATATGGGAACATCTTCAATGACATCTGCAACC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGACCTATCACAAAAGATaGCTCCTTGAGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMTYHKR*LLEPIL
Trigger: CAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGTTGATGCTTTGTCCATaGTGTTCACTGTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMLMLCP*CSLFCI
Trigger: GATGCAGAACAGTGAACACCATGGACAAAGCATCAA...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATTTCGTGACACTCATTTaGTTTCTGTTCAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDFVTLI*FLFSVR
Trigger: TCTCACACTGAACAGAAACCAAATGAGTGTCACGAA...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGTTCGTGACACTCATTTaGTTTCTGTTCAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLFVTLI*FLFSVR
Trigger: TCTCACACTGAACAGAAACCAAATGAGTGTCACGAA...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR TCA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATGAGGAAAATACTTACTaGATATTAGGACTCACACAG +
Preference number: 4 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDEENTY*ILGLTQ
Trigger: CTGTGTGAGTCCTAATATTCAGTAAGTATTTTCCTC...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGACAATATACACTCTTTaGGTGATGGGTGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLTIYTL*VMGALK
Trigger: TTTTAGTGCACCCATCACCCAAAGAGTGTATATTGT...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR GCA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATATTATATATCCTTGCTTaGTTTCGTGTCTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FSGVFKRLREVKAFLHSILYILA*FRVFQN
Trigger: ATTCTGGAAGACACGAAAGCAAGCAAGGATATATAA...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTAATATAAAAATTAGTTaGGCGTGGTGGCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCNIKIS*AWWHVP
Trigger: AGGCACATGCCACCACGCCCAACTAATTTTTATATT...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CCA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTTTAAGATCAGGAATCTaGCTAGTGCTTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCLRSGI*LVLFPH
Trigger: ATGTGGAAAAAGCACTAGCCAGATTCCTGATCTTAA...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCCCACTTGCTCTGGACTaGCTCCTCGAGGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: REAKVCISWLSHQVLHCIPLALD*LLEGSL
Trigger: GAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTGG...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS CCA 90 bp GACGACCACTTGCTCTGGACTTGCTCCTCGAGGGGTCGCTCCATCTaGAAACTGAGACTGGAATTCCTGCGCATCCCTGTCCCCGCATCC +
Preference number: 5 (lower is better)
Translates to: DDHLLWTCSSRGRSI*KLRLEFLRIPVPAS
Trigger: GGATGCGGGGACAGGGATGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTGGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS TCA 90 bp ACTTGCTCTGGACTTGCTCCTCGAGGGGTCGCTCCATCTGGAAACTaGGACTGGAATTCCTGCGCATCCCTGTCCCCGCATCCAGAAACA +
Preference number: 5 (lower is better)
Translates to: TCSGLAPRGVAPSGN*DWNSCASLSPHPET
Trigger: TGTTTCTGGATGCGGGGACAGGGATGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS GCA 90 bp CTGCAGGAAGACTTCCGTGTCCGACCCGAGATCCGGAACAATTTCTaGTTCAACACAATTGTCCACGGAGGGCACCAGTTCCGTCCCACC +
Preference number: 5 (lower is better)
Translates to: LQEDFRVRPEIRNNF*FNTIVHGGHQFRPT
Trigger: GGTGGGACGGAACTGGTGCCCTCCGTGGACAATTGTGTTGAAGCAGAAATTGTTCCGGATCTCGGGTCGGACACGGAAGTCTTCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS TCA 90 bp ACTTATCAAGGCGGAAGGCTACTGGGGATCGAGTCAGTCTTCACTTaGAGCAGGAGGGATCAGGAGAGAGCACGAAGTGGGAAGTGCCGC +
Preference number: 5 (lower is better)
Translates to: TYQGGRLLGIESVFT*SRRDQERARSGKCR
Trigger: GCGGCACTTCCCACTTCGTGCTCTCTCCTGATCCCTCCTGCTTCAAGTGAAGACTGACTCGATCCCCAGTAGCCTTCCGCCTTGATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465656.1
CDS GCA 90 bp GAGACTGGAATTCCTGCGCATCCCTGTCCCCGCATCCAGAAACACTaGAGGAAGACTTCCGTGTCCGACCCGAGATCCGGAACAATTTCT +
Preference number: 5 (lower is better)
Translates to: ETGIPAHPCPRIQKH*RKTSVSDPRSGTIS
Trigger: AGAAATTGTTCCGGATCTCGGGTCGGACACGGAAGTCTTCCTGCAGTGTTTCTGGATGCGGGGACAGGGATGCGCAGGAATTCCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS-3UTR CAA 90 bp GCGAATGTTCCTGGTGAGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCATCTGCTTCAACACAATaGTCCACGGAGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: ANVPGERSEGVHLLAQPPSASTQ*STEGTS
Trigger: ACTGGTGCCCTCCGTGGACAATTGTGTTGAAGCAGA...TGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCTCACCAGGAACATTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCTGTTCCTGTGCGGCCTaGACTAGACGACCACTTGCT +
Preference number: 5 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSCSCAA*TRRPLA
Trigger: AGCAAGTGGTCGTCTAGTCAAGGCCGCACAGGAACA...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCGTCCAAAGTGTAGGTTaGAGATGGGAAATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: REAKVCISWLSHQVLHCIVQSVG*RWEMEL
Trigger: CAGCTCCATTTCCCATCTCAAACCTACACTTTGGAC...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAGACCCATCCCTGCTGTaGGGGGAGGGTGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: YIRSFSVHGVHSHICNPADPSLL*GEGGGQ
Trigger: CTGGCCTCCACCCTCCCCCAACAGCAGGGATGGGTC...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCACCCAGGGAGACTGTaGTTACGAGGGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICHPGRL*LRGWMV
Trigger: CACCATCCACCCTCGTAACAACAGTCTCCCTGGGTG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCTTGAGTCTTGATGCTTaGTCCATGGTGTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: REAKVCISWLSHQVLHCILSLDA*SMVFTV
Trigger: AACAGTGAACACCATGGACAAAGCATCAAGACTCAA...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CAGAGGCCTAAAGAGTTCCGACCCGAGCGACACAAAGATCACTTCTGGGACCCAAGGCAGAAGAATTGCTaGAACCCAGAGGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: QRPKEFRPERHKDHFWDPRQKNC*NPEVTV
Trigger: CACTGTAACCTCTGGGTTCAAGCAATTCTTCTGCCT...TGGGTCCCAGAAGTGATCTTTGTGTCGCTCGGGTCGGAACTCTTTAGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp AGAGAAGCGAAGGTGTGCATCTCCTGGCTCAGCCACCAGGTCCTCCACTGCATCGAATCTCGACAATGGTaGCAGATGTCATTGAAGATG +
Preference number: 5 (lower is better)
Translates to: REAKVCISWLSHQVLHCIESRQW*QMSLKM
Trigger: CATCTTCAATGACATCTGCAACCATTGTCGAGATTC...GATGCAGTGGAGGACCTGGTGGCTGAGCCAGGAGATGCACACCTTCGCTTCTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCGTGCCTTATATATCCTaGCTTGCTTTCGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSVPYIS*LAFVSS
Trigger: GGAAGACACGAAAGCAAGCAAGGATATATAAGGCAC...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTGCTGAAACAGGAGAATaGCTTGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICAETGE*LEPGRQ
Trigger: CTGCCTCCCAGGTTCAAGCAATTCTCCTGTTTCAGC...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCCTTACATGTATAAGGTaGAACTCCGGTGTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSLTCIR*NSGVGF
Trigger: AAAACCCACACCGGAGTTCAACCTTATACATGTAAG...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATACAGAGCCACCTGCGGTaGCCACAGAGAAATTCAGAT +
Preference number: 5 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIQSHLR*PQRNSD
Trigger: ATCTGAATTTCTCTGTGGCAACCGCAGGTGGCTCTG...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCACAAGGTCAGGAGATaGAGACCATCCTGGTCAACA +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICHKVRR*RPSWST
Trigger: TGTTGACCAGGATGGTCTCAATCTCCTGACCTTGTG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACCACTTGCTCTGGACTaGCTCCTCGAGGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LMLCPWCSLFCIYWVQYTPLALD*LLEGSL
Trigger: GAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTGG...TGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTGGAGATGGAGTCAGTTaGAGTCTTGATGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICGDGVS*SLDALS
Trigger: GGACAAAGCATCAAGACTCAAACTGACTCCATCTCC...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTCAGGAACTAGATGACTaGAAGGCTTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICQELDD*KASPHF
Trigger: GAAATGTGGGGAAGCCTTCAAGTCATCTAGTTCCTG...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp GCCCATTCTGACAGTGAAGGAATCTCGAACTTCCTGACCTCCCACAGTACAATACGTGTTTTCGAAGGCTaGAGTGAGAAAAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: AHSDSEGISNFLTSHSTIRVFEG*SEKRRL
Trigger: GAGCCTTCTTTTCTCACTCAAGCCTTCGAAAACACG...TATTGTACTGTGGGAGGTCAGGAAGTTCGAGATTCCTTCACTGTCAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTCTGGACCCTAGTATCTTCACCGTGGTTTTGGATGCTGCCACCTGACCCATCCTTGTTAAATATTTCATaGCCGCATGAGTCACGTCTT +
Preference number: 5 (lower is better)
Translates to: LWTLVSSPWFWMLPPDPSLLNIS*PHESRL
Trigger: AAGACGTGACTCATGCGGCAATGAAATATTTAACAA...GGATGGGTCAGGTGGCAGCATCCAAAACCACGGTGAAGATACTAGGGTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATACGGCAGGAGAATTGCTaGAATCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIRQENC*NPGGGG
Trigger: ACCTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCG...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGAGCTGAGGCAGAAGAATaGCTTGAACCCAGAGGTTAC +
Preference number: 5 (lower is better)
Translates to: TYHKRWLLEPILTVKESRAEAEE*LEPRGY
Trigger: GTAACCTCTGGGTTCAAGCAATTCTTCTGCCTCAGC...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTTGGTTGCAGATGTCATaGAAGATGTTCCCATATTGC +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICWLQMS*KMFPYC
Trigger: GCAATATGGGAACATCTTCAATGACATCTGCAACCA...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp GTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATACCCCTTAGTTCCCCAATAGGAGTTGAGTTCACCTaGCCTTGTGATGTGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VNVLTPIPVAEIPLSSPIGVEFT*PCDVKQ
Trigger: TTGCTTCACATCACAAGGCAAGGTGAACTCAACTCC...TATTGGGGAACTAAGGGGTATCTCTGCTACAGGAATGGGAGTGAGAACATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TACATTCGTAGCTTTTCTGTCCATGGAGTCCATTCACATATCTGCAATCCCGCAAGGCAGGAGAATTGCTaGAACCTGAGAAGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YIRSFSVHGVHSHICNPARQENC*NLRSGG
Trigger: ACCTCCACTTCTCAGGTTCAAGCAATTCTCCTGCCT...TGCGGGATTGCAGATATGTGAATGGACTCCATGGACAGAAAAGCTACGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACTCTGCTTCAACACAATaGTCCACGGAGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: LDALSMVFTVLHLLGTIYSASTQ*STEGTS
Trigger: ACTGGTGCCCTCCGTGGACAATTGTGTTGAAGCAGA...GTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TCCATTCACATATCTGCAATCCCGCAGGAGAGTGCAAGTTCCTCCCCCATTTGTAAGTTCCTCCCCCATTaGTTAAATATTTCATTGCCG +
Preference number: 5 (lower is better)
Translates to: SIHISAIPQESASSSPICKFLPH*LNISLP
Trigger: CGGCAATGAAATATTTAACAAATGGGGGAGGAACTT...ACAAATGGGGGAGGAACTTGCACTCTCCTGCGGGATTGCAGATATGTGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGTGTAATCCCAGCACTTaGGGGAGACCGAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMCNPST*GRPRWV
Trigger: CACCCACCTCGGTCTCCCCAAAGTGCTGGGATTACA...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACGGAGATGGAGTCAGTTaGAGTCTTGATGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LDALSMVFTVLHLLGTIYGDGVS*SLDALS
Trigger: GGACAAAGCATCAAGACTCAAACTGACTCCATCTCC...GTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp ACCTATCACAAAAGATGGCTCCTTGAGCCCATTCTGACAGTGAAGGAATCTCGACTTATATATCCTTGCTaGCTTTCGTGTCTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: TYHKRWLLEPILTVKESRLIYPC*LSCLPE
Trigger: TTCTGGAAGACACGAAAGCAAGCAAGGATATATAAG...TCGAGATTCCTTCACTGTCAGAATGGGCTCAAGGAGCCATCTTTTGTGATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS CCA 90 bp ATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTaGGTGATGGGTGCACTAAAAGCCAGACTTCGCCACTATGAAATA +
Preference number: 5 (lower is better)
Translates to: MVFTVLHLLGTIYTL*VMGALKARLRHYEI
Trigger: TATTTCATAGTGGCGAAGTCTGGCTTTTAGTGCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATAAACAGGAGAATTGCTaGAACCTGGGAGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDKQENC*NLGGRD
Trigger: ATCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGTTT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp CTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACATTCGTGACACTCATTaGGTTTCTGTTCAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LDALSMVFTVLHLLGTIYIRDTH*VSVQCE
Trigger: CTCACACTGAACAGAAACCAAATGAGTGTCACGAAT...GTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TTCTCAGGTGTCTTTAAAAGATTACGTGAAGTGAAGGCTTTCCTACACTCCATACAGAAACAAGGATATTaGCTCTCACCAGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: FSGVFKRLREVKAFLHSIQKQGY*LSPAPF
Trigger: GAATGGAGCTGGTGAGAGCAAATATCCTTGTTTCTG...TATGGAGTGTAGGAAAGCCTTCACTTCACGTAATCTTTTAAAGACACCTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp GTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGGGTGATGGGTGCACTGTTCTGCATCTATaGGGTACAATATACACTCTT +
Preference number: 5 (lower is better)
Translates to: VHCSASIGYNIHSLGDGCTVLHL*GTIYTL
Trigger: AAGAGTGTATATTGTACCCAATAGATGCAGAACAGT...GCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TTTGTCCATGGTGTTCACTGTTCTGCATCTATTGGGTACAATATACACTCTTTGTTGAGTCTTGATGCTTaGTCCATGGTGTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: FVHGVHCSASIGYNIHSLLSLDA*SMVFTV
Trigger: AACAGTGAACACCATGGACAAAGCATCAAGACTCAA...CAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS-3UTR CAA 90 bp TATACTTGTCCTTCAAAAAGTGAATGTTCTCACTCCCATTCCTGTAGCAGAGATATTAGCACAGCTTTGTaGACTACACCTATTAGAGGG +
Preference number: 5 (lower is better)
Translates to: YTCPSKSECSHSHSCSRDISTAL*TTPIRG
Trigger: CCCTCTAATAGGTGTAGTCAACAAAGCTGTGCTAAT...ATCTCTGCTACAGGAATGGGAGTGAGAACATTCACTTTTTGAAGGACAAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp TTTAATTCTTCCTACGAAGAATCTCGACAATGGTTGCAGATGTCATTGAAGATGATTCGTGACACTCATTaGGTTTCTGTTCAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: FNSSYEESRQWLQMSLKMIRDTH*VSVQCE
Trigger: CTCACACTGAACAGAAACCAAATGAGTGTCACGAAT...CATCTTCAATGACATCTGCAACCATTGTCGAGATTCTTCGTAGGAAGAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS-3UTR CAA 90 bp ATATACACACAGCCCTCTAGACAAATATACAAAAATCACACACGTTATCACTGTATAGGCAGATCCCACTaGGGGAAAAACTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: IYTQPSRQIYKNHTRYHCIGRSH*GKNCKM
Trigger: CATCTTACAGTTTTTCCCCAAGTGGGATCTGCCTAT...ACAGTGATAACGTGTGTGATTTTTGTATATTTGTCTAGAGGGCTGTGTGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS TCA 72 bp GGACTTGCTCCTCGAGGGGTCGCTCCATCTGGAAACTaGGACTGGAATTCCTGCGCATCCCTGTCCCCGCAT +
Preference number: 6 (lower is better)
Translates to: GLAPRGVAPSGN*DWNSCASLSPH
Trigger: ATGCGGGGACAGGGATGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS TCA 72 bp GGGAAGTGCCGCACATCTTTAAACCATCAGATCTCCTaGGAACTGCGACGGCAGCAGCCAGTCCCCACGGGC +
Preference number: 6 (lower is better)
Translates to: GKCRTSLNHQIS*ELRRQQPVPTG
Trigger: GCCCGTGGGGACTGGCTGCTGCCGTCGCAGTTCTCAGGAGATCTGATGGTTTAAAGATGTGCGGCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465656.1
CDS GCA 72 bp ATTCCTGCGCATCCCTGTCCCCGCATCCAGAAACACTaGAGGAAGACTTCCGTGTCCGACCCGAGATCCGGA +
Preference number: 6 (lower is better)
Translates to: IPAHPCPRIQKH*RKTSVSDPRSG
Trigger: TCCGGATCTCGGGTCGGACACGGAAGTCTTCCTGCAGTGTTTCTGGATGCGGGGACAGGGATGCGCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS CAA 90 bp TCCGTGTCCGACCCGAGATCCGGAACAATTTCTGCTTCAACACAATaGTCCACGGAGGGCACCAGTTCCGTCCCACCGGCGGAAGCGAGA +
Preference number: 6 (lower is better)
Translates to: SVSDPRSGTISASTQ*STEGTSSVPPAEAR
Trigger: TCTCGCTTCCGCCGGTGGGACGGAACTGGTGCCCTCCGTGGACAATTGTGTTGAAGCAGAAATTGTTCCGGATCTCGGGTCGGACACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS CAA 72 bp GACCCGAGATCCGGAACAATTTCTGCTTCAACACAATaGTCCACGGAGGGCACCAGTTCCGTCCCACCGGCG +
Preference number: 6 (lower is better)
Translates to: DPRSGTISASTQ*STEGTSSVPPA
Trigger: CGCCGGTGGGACGGAACTGGTGCCCTCCGTGGACAATTGTGTTGAAGCAGAAATTGTTCCGGATCTCGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS CAA 72 bp TGTGCGGCCTTGACTAGACGACCACTTGCTCTGGACTaGCTCCTCGAGGGGTCGCTCCATCTGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: CAALTRRPLALD*LLEGSLHLETE
Trigger: CTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTGGTCGTCTAGTCAAGGCCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS CCA 72 bp TTGCTCTGGACTTGCTCCTCGAGGGGTCGCTCCATCTaGAAACTGAGACTGGAATTCCTGCGCATCCCTGTC +
Preference number: 6 (lower is better)
Translates to: LLWTCSSRGRSI*KLRLEFLRIPV
Trigger: GACAGGGATGCGCAGGAATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS CAA 90 bp TCCTGTTCCTGTGCGGCCTTGACTAGACGACCACTTGCTCTGGACTaGCTCCTCGAGGGGTCGCTCCATCTGGAAACTGAGACTGGAATT +
Preference number: 6 (lower is better)
Translates to: SCSCAALTRRPLALD*LLEGSLHLETETGI
Trigger: AATTCCAGTCTCAGTTTCCAGATGGAGCGACCCCTCGAGGAGCAAGTCCAGAGCAAGTGGTCGTCTAGTCAAGGCCGCACAGGAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311437.11
ENST00000414906.5
CDS CCA 72 bp GTCACACAGTTCTGCAGGCTGTACAGGAAGCAAGGCTaGGAGGCCTCAGGAAACTTATCAAGGCGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VTQFCRLYRKQG*EASGNLSRRKA
Trigger: AGCCTTCCGCCTTGATAAGTTTCCTGAGGCCTCCCAGCCTTGCTTCCTGTACAGCCTGCAGAACTGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465656.1
CDS CCA 72 bp CACTTGAAGCAGGAGGGATCAGGAGAGAGCACGAAGTaGGAAGTGCCGCACATCTTTAAACCATCAGATCTC +
Preference number: 6 (lower is better)
Translates to: HLKQEGSGESTK*EVPHIFKPSDL
Trigger: GAGATCTGATGGTTTAAAGATGTGCGGCACTTCCCACTTCGTGCTCTCTCCTGATCCCTCCTGCTTCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465656.1
CDS CAA 72 bp CTCAAGGGAGATGGAGTCAGTTTGAGTCTTGATGCTTaGTCCATGGTGTTCACTGTTCTGCATCTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: LKGDGVSLSLDA*SMVFTVLHLED
Trigger: GTCCTCCAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAGACTCAAACTGACTCCATCTCCCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311437.11
CDS CCA 72 bp ACTGTTCTGCATCTATTGGGTACAATATACACTCTTTaGGTGATGGGTGCACTAAAAGCCAGACTTCGCCAC +
Preference number: 6 (lower is better)
Translates to: TVLHLLGTIYTL*VMGALKARLRH
Trigger: GTGGCGAAGTCTGGCTTTTAGTGCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS CAA 72 bp CACTGTTCTGCATCTATTGGGTACAATATACACTCTTaGGGTGATGGGTGCACTAAAAGCCAGACTTCGCCA +
Preference number: 6 (lower is better)
Translates to: HCSASIGYNIHS*GDGCTKSQTSP
Trigger: TGGCGAAGTCTGGCTTTTAGTGCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5
CDS CAA 72 bp CTCAAGGGAGATGGAGTCAGTTTGAGTCTTGATGCTTaGTCCATGGTGTTCACTGTTCTGCATCTAGGTGTA +
Preference number: 6 (lower is better)
Translates to: LKGDGVSLSLDA*SMVFTVLHLGV
Trigger: TACACCTAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAGACTCAAACTGACTCCATCTCCCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465656.1
CDS CAA 90 bp TTGAGTCTTGATGCTTTGTCCATGGTGTTCACTGTTCTGCATCTATaGGGTACAATATACACTCTTTGGGTGATGGGTGCACTAAAAGCC +
Preference number: 6 (lower is better)
Translates to: LSLDALSMVFTVLHL*GTIYTLWVMGALKA
Trigger: GGCTTTTAGTGCACCCATCACCCAAAGAGTGTATATTGTACCCAATAGATGCAGAACAGTGAACACCATGGACAAAGCATCAAGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414906.5