Pregenerated sensors for ZNF474 (Homo sapiens)
Ensembl gene IDs: ENSG00000164185Ensembl transcript IDs: ENST00000296600.5, ENST00000504912.1, ENST00000505843.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGGATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACACCCGGAATCCAGGCCTaGGGGCCGGGATCACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RMFLYLFSQERYRPWSSTPGIQA*GPGSQG Trigger: CCCCTGTGATCCCGGCCCGCAGGCCTGGATTCCGGG...TGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTGGGCTGAGGCTTCTGTaGGAGTGGCTGGTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLGLRLL*EWLVEL Trigger: GAGCTCCACCAGCCACTCCCACAGAAGCCTCAGCCC...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGGCATTCGGAAGGGGCTaGGGCTTCTGTGGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGAFGRG*GFCGSG Trigger: GCCACTCCCACAGAAGCCTCAGCCCCTTCCGAATGC...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTCGCTTGGCTGGACTGTaGATTCGGAAGGGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSRLAGL*IRKGLR Trigger: CCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCG...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTTTGAGTGTGGTGCTCTaGGACCCTCACCCTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLLSVVL*DPHPLA Trigger: AGCCAAAGGGTGAGGGTCCCAGAGCACCACACTCAA...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCTTCTTCTTTTAGACAGCAGAATTGAAGAGGAATATGAACCCATCAGGTGTGGGAGTGGCTGGTaGAGCTCCACAGGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PSLLLLDSRIEEEYEPIRCGSGW*SSTGSR Trigger: CCGGCTCCCTGTGGAGCTCCACCAGCCACTCCCACA...CCTGATGGGTTCATATTCCTCTTCAATTCTGCTGTCTAAAAGAAGAAGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTTGGGGTTCACACCGTTaGCAGTACCTTAGCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLWGSHR*QYLSLT Trigger: TGTGAGGCTAAGGTACTGGCAACGGTGTGAACCCCA...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTAGTCCTTGGTCGGGCTaGGGTTCCACTACAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLSPWSG*GSTTSF Trigger: AAAGCTTGTAGTGGAACCCCAGCCCGACCAAGGACT...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTAAGCACTGGGGTTCATaGATGGCAATTGACTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLKHWGS*MAIDWD Trigger: GTCCCAGTCAATTGCCATTCATGAACCCCAGTGCTT...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGGGGACCCTCACCCTTTaGCTTGCAGCTTCTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGGTLTL*LAASVM Trigger: CATCACAGAAGCTGCAAGCCAAAGGGTGAGGGTCCC...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AGGATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACATTGGTCCCGCTTGGCTaGACTGTGCATTCGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RMFLYLFSQERYRPWSSTLVPLG*TVHSEG Trigger: CCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAA...TGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAAGGACCCACTGCTGCTaGGAGACTGTGGTTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKERTHCC*ETVVWR Trigger: CCTCCAAACCACAGTCTCTCAGCAGCAGTGGGTCCT...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGTACCAGGAGGCGGTCTaGGGTAAAGATTCGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGYQEAV*GKDSAT Trigger: TGTAGCCGAATCTTTACCTCAGACCGCCTCCTGGTA...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTGATCTGGCAAGAATGTaGGGCCACAGGATTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSDLARM*GHRIHR Trigger: CCTGTGAATCCTGTGGCCGCACATTCTTGCCAGATC...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCGCAGATAACAGTCCTTaGTCGGGCTGGGGTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVADNSP*SGWGST Trigger: AGTGGAACCCCAGCCCGACCAAGGACTGTTATCTGC...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTTTCATGAATGGCAATTaGCTGGGACCCAAATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLFMNGN*LGPKFS Trigger: CGAGAATTTGGGTCCCAGTCAATTGCCATTCATGAA...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTAGTTACACTGGGTGCTaGCCTGTTCCTTTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSSYTGC*PVPLLL Trigger: AAGCAGCAAAGGAACAGGGCAGCACCCAGTGTAACT...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTCAGGAACAGAATAGCTaGGAGCTCCAAGATTCACAT | + |
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Preference number: 4 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLQEQNS*ELQDSH Trigger: ATGTGAATCTTGGAGCTCCCAGCTATTCTGTTCCTG...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCTGGTTTGGAGGGTTCTaGCCTCCTCAAATGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVWFGGF*PPQMLG Trigger: CCCAAGCATTTGAGGAGGCCAGAACCCTCCAAACCA...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCAAGCTGAGCTTGATTTaGTCCCGCTTGGCTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVKLSLI*SRLAGL Trigger: CAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTT...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTTTAGCATGGCATGCTaGGCACCTCTGAGTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSFSMAC*APLSFQ Trigger: CTGAAAACTCAGAGGTGCTCAGCATGCCATGCTAAA...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | AGGATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAATGATCAGAACTGTTTaGGTGTGGTGCTCTGGGACC | + |
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Preference number: 4 (lower is better) Translates to: RMFLYLFSQERYRPWSSTMIRTV*VWCSGT Trigger: GGTCCCAGAGCACCACACTCAAACAGTTCTGATCAT...TGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAAGGCATTTGGGCTCATaGATAGGAAGGGACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKERHLGS*IGRDRV Trigger: CACCCTGTCCCTTCCTATTCATGAGCCCAAATGCCT...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAACAGGGAGTTAACTTaGACAGGCTGCTTTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGNRELT*TGCFEA Trigger: AGCCTCAAAGCAGCCTGTTCAAGTTAACTCCCTGTT...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTCTGGCCTCCTCAAATaGTTGGGCAACTTGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSSGLLK*LGNLLF Trigger: AAACAGCAAGTTGCCCAAGCATTTGAGGAGGCCAGA...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAACTGGGCACTCTGAAATaGAGCCTCGTTAGTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKELGTLK*SLVSCL Trigger: CAGGCAACTAACGAGGCTGCATTTCAGAGTGCCCAG...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGGCTGCCCTGTTCCTTTaGTGCTTGGAATTAGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGAALFL*CLELVY Trigger: GTACACTAATTCCAAGCAGCAAAGGAACAGGGCAGC...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCATCAGTTACACTGGGTaGTGCCCTGTTCCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVISYTG*CPVPLL Trigger: CAGCAAAGGAACAGGGCAGCACCCAGTGTAACTGAT...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTACTGGGGTTCATGAATaGCAATTGACTGGGACCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSTGVHE*QLTGTQ Trigger: TTGGGTCCCAGTCAATTGCCATTCATGAACCCCAGT...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | AGGATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGATTCGGCTACAATGTaGGCAGAACACAAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RMFLYLFSQERYRPWSSTDSATM*AEHKLS Trigger: GCTCAGCTTGTGTTCTGCCCACATTGTAGCCGAATC...TGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTGTTTTACAACTTCTCTaGTGTACCAGGAGGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSVLQLL*CTRRRS Trigger: AGACCGCCTCCTGGTACACCAGAGAAGTTGTAAAAC...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGACTCAGAGCTTCATTaGAGGACGGCAGTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKEDSELH*RTAVWN Trigger: ATTCCAGACTGCCGTCCTGCAATGAAGCTCTGAGTC...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTCTTTCTGTAGTGCTTaGTCTGATTTCAGGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSSFCSA*SDFRPD Trigger: GTCTGGCCTGAAATCAGAGCAAGCACTACAGAAAGA...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCTTCTTCTTTTAGACAGCAGAATTGAAGAGGAATATGAACCCATCAGGTGCAGGACGGCAGTCTaGAATGTTGGAAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PSLLLLDSRIEEEYEPIRCRTAV*NVGKSS Trigger: TGAGGACTTTCCAACATTCCAGACTGCCGTCCTGCA...CCTGATGGGTTCATATTCCTCTTCAATTCTGCTGTCTAAAAGAAGAAGAGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCGAGAGAAGCCCAGCTTaGTTGATAAGGAAAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVERSPA*LIRKVG Trigger: ACCCACTTTCCTTATCAACCAAGCTGGGCTTCTCTC...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTGCCTCCTCAAATGCTTaGGCAACTTGCTGTTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSASSNA*ATCCFQ Trigger: TTGAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGC...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCGGCTTCTGCTTAGAGTaGAGGTTAGTGAGGTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVGFCLE*RLVRLV Trigger: AACTAACCTCACTAACCTTCACTCTAAGCAGAAGCC...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTTGCTGTTTTCAATATaGCACTTCTGCAAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: FLYLFSQERYRPWSSTGSLLFSI*HFCKHW Trigger: CCAGTGCTTGCAGAAGTGGCATATTGAAAACAGCAA...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCTTCTTCTTTTAGACAGCAGAATTGAAGAGGAATATGAACCCATCAGGCCTCACCCTTTGGCTTaGAGCTTCTGTGATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: PSLLLLDSRIEEEYEPIRPHPLA*SFCDEQ Trigger: TTGTTCATCACAGAAGCTGCAAGCCAAAGGGTGAGG...CCTGATGGGTTCATATTCCTCTTCAATTCTGCTGTCTAAAAGAAGAAGAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCAACAAGAAGATGATCTaGCAAGAATGTGCGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVNKKMI*QECAAT Trigger: TGTGGCCGCACATTCTTGCCAGATCATCTTCTTGTT...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGCAGCATTGCCAAAAATaGATTCCTAAGGTAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: MFLYLFSQERYRPWSSTGQHCQK*IPKVDD Trigger: GTCATCTACCTTAGGAATTCATTTTTGGCAATGCTG...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCAACACTCTCTGTTTCTaGGGAAAGGCTAGAATAGGA | + |
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Preference number: 4 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVNTLCF*GKARIG Trigger: TCCTATTCTAGCCTTTCCCCAGAAACAGAGAGTGTT...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR TCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAATTGAGGCCAGTAAGATaGTCAGAACTGTTTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKELRPVR*SELFEC Trigger: ACACTCAAACAGTTCTGATCATCTTACTGGCCTCAA...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CCA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAACTAATGCGTCTTGTGTaGCATGAATTACCTTATCAG | + |
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Preference number: 4 (lower is better) Translates to: QITVSPRDYLYQGSGKKELMRLV*HELPYQ Trigger: CTGATAAGGTAATTCATGCCACACAAGACGCATTAG...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | TCCCGCTTGGCTGGACTGTGCATTCGGAAGGGGCTGAGGCTTCTGTaGGAGTGGCTGGTGGAGCTCCACAGGGAGCCGGTCATTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SRLAGLCIRKGLRLL*EWLVELHREPVIFH Trigger: ATGGAAAATGACCGGCTCCCTGTGGAGCTCCACCAGCCACTCCCACAGAAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 90 bp | GCCACAGGATTCACAGGGCAGCAGCTGAGCCTGGGCACTCTGAAATaGAGCCTCGTTAGTTGCCTGAAGACTGTAGGACCCACTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ATGFTGQQLSLGTLK*SLVSCLKTVGPTAA Trigger: AGCAGCAGTGGGTCCTACAGTCTTCAGGCAACTAACGAGGCTGCATTTCAGAGTGCCCAGGCTCAGCTGCTGCCCTGTGAATCCTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 90 bp | GGGCAGCAGCTGAGCCTGGGCACTCTGAAATGCAGCCTCGTTAGTTaGCTGAAGACTGTAGGACCCACTGCTGCTGAGAGACTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQQLSLGTLKCSLVS*LKTVGPTAAERLWF Trigger: AAACCACAGTCTCTCAGCAGCAGTGGGTCCTACAGTCTTCAGGCAACTAACGAGGCTGCATTTCAGAGTGCCCAGGCTCAGCTGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 90 bp | GGTCGGGCTGGGGTTCCACTACAAGCTTTCTTGAGGCCAGTAAGATaGTCAGAACTGTTTGAGTGTGGTGCTCTGGGACCCTCACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRAGVPLQAFLRPVR*SELFECGALGPSPF Trigger: AAAGGGTGAGGGTCCCAGAGCACCACACTCAAACAGTTCTGATCATCTTACTGGCCTCAAGAAAGCTTGTAGTGGAACCCCAGCCCGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | AAAGATTCGGCTACAATGTGGGCAGAACACAAGCTGAGCTTGATTTaGTCCCGCTTGGCTGGACTGTGCATTCGGAAGGGGCTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KDSATMWAEHKLSLI*SRLAGLCIRKGLRL Trigger: AAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCTGCCCACATTGTAGCCGAATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | CCTACAGGCAGAGGGCACCACCAGGTTCACCTAATGCGTCTTGTGTaGCATGAATTACCTTATCAGTTACACTGGGTGCTGCCCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGRGHHQVHLMRLV*HELPYQLHWVLPCS Trigger: GGAACAGGGCAGCACCCAGTGTAACTGATAAGGTAATTCATGCCACACAAGACGCATTAGGTGAACCTGGTGGTGCCCTCTGCCTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 90 bp | AGGCAGAGGGCACCACCAGGTTCACCTAATGCGTCTTGTGTGGCATaGATTACCTTATCAGTTACACTGGGTGCTGCCCTGTTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQRAPPGSPNASCVA*ITLSVTLGAALFLC Trigger: GCAAAGGAACAGGGCAGCACCCAGTGTAACTGATAAGGTAATTCATGCCACACAAGACGCATTAGGTGAACCTGGTGGTGCCCTCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 90 bp | CGTTGCCAGTACCTTAGCCTCACAGACCGTGACTCAGAGCTTCATTaGAGGACGGCAGTCTGGAATGTTGGAAAGTCCTCATTAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCQYLSLTDRDSELH*RTAVWNVGKSSLKL Trigger: CAGCTTTAATGAGGACTTTCCAACATTCCAGACTGCCGTCCTGCAATGAAGCTCTGAGTCACGGTCTGTGAGGCTAAGGTACTGGCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296600.5 ENST00000504912.1 ENST00000505843.1 |
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| CDS CCA 90 bp | ACTGTAGGACCCACTGCTGCTGAGAGACTGTGGTTTGGAGGGTTCTaGCCTCCTCAAATGCTTGGGCAACTTGCTGTTTTCAATATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVGPTAAERLWFGGF*PPQMLGQLAVFNMP Trigger: TGGCATATTGAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGCCAGAACCCTCCAAACCACAGTCTCTCAGCAGCAGTGGGTCCTACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 90 bp | CAGAACTGTTTGAGTGTGGTGCTCTGGGACCCTCACCCTTTGGCTTaGAGCTTCTGTGATGAACAAGAAGATGATCTGGCAAGAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNCLSVVLWDPHPLA*SFCDEQEDDLARMC Trigger: GCACATTCTTGCCAGATCATCTTCTTGTTCATCACAGAAGCTGCAAGCCAAAGGGTGAGGGTCCCAGAGCACCACACTCAAACAGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | CAGGGTGCCAAATTCCTTACCACATATGTAGCAGATAACAGTCCTTaGTCGGGCTGGGGTTCCACTACAAGCTTTCTTGAGGCCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: QGAKFLTTYVADNSP*SGWGSTTSFLEASK Trigger: CTTACTGGCCTCAAGAAAGCTTGTAGTGGAACCCCAGCCCGACCAAGGACTGTTATCTGCTACATATGTGGTAAGGAATTTGGCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGCTGAGAGACTGTGGTTaGGAGGGTTCTGGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MFLYLFSQERYRPWSSTGLRDCG*EGSGLL Trigger: GAGGAGGCCAGAACCCTCCAAACCACAGTCTCTCAG...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTGAACACAAGCTGAGCTaGATTTGGTCCCGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLEHKLS*IWSRLA Trigger: AGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTC...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | AGCCTCACAGACCGTGACTCAGAGCTTCATTGCAGGACGGCAGTCTaGAATGTTGGAAAGTCCTCATTAAAGCTGAGATGTCTCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLTDRDSELHCRTAV*NVGKSSLKLRCLQD Trigger: ATCTTGGAGACATCTCAGCTTTAATGAGGACTTTCCAACATTCCAGACTGCCGTCCTGCAATGAAGCTCTGAGTCACGGTCTGTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296600.5 ENST00000504912.1 ENST00000505843.1 |
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| CDS-3UTR CAA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGTGGGACCCTCACCCTTaGGCTTGCAGCTTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MFLYLFSQERYRPWSSTGWDPHP*ACSFCD Trigger: ATCACAGAAGCTGCAAGCCAAAGGGTGAGGGTCCCA...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTCAAGCTGAGCTTGATTaGGTCCCGCTTGGCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FLYLFSQERYRPWSSTGSQAELD*VPLGWT Trigger: AGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTG...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 90 bp | ATAAGGATGAGTTTTACAACTTCTCTGGTGTACCAGGAGGCGGTCTaGGGTAAAGATTCGGCTACAATGTGGGCAGAACACAAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRMSFTTSLVYQEAV*GKDSATMWAEHKLS Trigger: GCTCAGCTTGTGTTCTGCCCACATTGTAGCCGAATCTTTACCTCAGACCGCCTCCTGGTACACCAGAGAAGTTGTAAAACTCATCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTAGAGAGAAGCCCAGCTaGGTTGATAAGGAAAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLYLFSQERYRPWSSTGSREKPS*VDKESG Trigger: CCCACTTTCCTTATCAACCAAGCTGGGCTTCTCTCT...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTGATGATCAGAACTGTTaGAGTGTGGTGCTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLYLFSQERYRPWSSTGSDDQNC*SVVLWD Trigger: GTCCCAGAGCACCACACTCAAACAGTTCTGATCATC...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCTTCTTCTTTTAGACAGCAGAATTGAAGAGGAATATGAACCCATCAGGTTGATTTGGTCCCGCTaGGCTGGACTGTGCATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLLDSRIEEEYEPIRLIWSR*AGLCIR Trigger: CCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAA...CCTGATGGGTTCATATTCCTCTTCAATTCTGCTGTCTAAAAGAAGAAGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | AAATTCCTTACCACATATGTAGCAGATAACAGTCCTTGGTCGGGCTaGGGTTCCACTACAAGCTTTCTTGAGGCCAGTAAGATGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KFLTTYVADNSPWSG*GSTTSFLEASKMIR Trigger: TCTGATCATCTTACTGGCCTCAAGAAAGCTTGTAGTGGAACCCCAGCCCGACCAAGGACTGTTATCTGCTACATATGTGGTAAGGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGCTTGAACAGGCTGCTTaGAGGCTGATACAAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: MFLYLFSQERYRPWSSTGLEQAA*RLIQGI Trigger: AATGCCTTGTATCAGCCTCAAAGCAGCCTGTTCAAG...CCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTTAACTTGAACAGGCTGCTTTTCTACTTGACAGTTTaGATAGTATCACAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KRGIGPGVQQGVNLNRLLFYLTV*IVSQSQ Trigger: CTGGGACTGTGATACTATCAAAACTGTCAAGTAGAA...AAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGGCCTCCTCAAATGCTaGGGCAACTTGCTGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QITVSPRDYLYQGSGKKEGLLKC*GNLLFS Trigger: TGAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGCC...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | ATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAGTCTGCTGCCCTGTTCCTTaGCTGCTTGGAATTAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ITVSPRDYLYQGSGKKEVCCPVP*LLGISV Trigger: TACACTAATTCCAAGCAGCAAAGGAACAGGGCAGCA...GACTTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | AGGATGTTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACATCTCCCAGGGATTATTaGTATCAGGGATCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RMFLYLFSQERYRPWSSTSPRDY*YQGSGK Trigger: CTTCCCTGATCCCTGATACAAATAATCCCTGGGAGA...TGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAACATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | AGTGTCTGTCTTTATATTTTCACCAGGATTAACACTCTCTGTTTCTaGGGAAAGGCTAGAATAGGAGTCACTAGAGAGAAGCCCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVCLYIFTRINTLCF*GKARIGVTREKPSL Trigger: CAAGCTGGGCTTCTCTCTAGTGACTCCTATTCTAGCCTTTCCCCAGAAACAGAGAGTGTTAATCCTGGTGAAAATATAAAGACAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296600.5 ENST00000504912.1 |
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| CDS-3UTR CAA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAAAGAAGCCCAGCTTGGTaGATAAGGAAAGTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QITVSPRDYLYQGSGKKERSPAW*IRKVGS Trigger: AGAACCCACTTTCCTTATCAACCAAGCTGGGCTTCT...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS-3UTR CAA 90 bp | TTCTTATATCTATTCAGCCAAGAGAGGTATAGGCCCTGGAGTTCAACAGGGAGTAAATGCTTGGGCAACTaGCTGTTTTCAATATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLYLFSQERYRPWSSTGSKCLGN*LFSICH Trigger: GTGGCATATTGAAAACAGCAAGTTGCCCAAGCATTT...ACTCCCTGTTGAACTCCAGGGCCTATACCTCTCTTGGCTGAATAGATATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 90 bp | CATCTCTGGAGAAATGTTCACTCAGTTGGCCTGAATTATTCGTTTTaGCCATATCTGCACATAGGACATTTACAGAATGTCCTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLWRNVHSVGLNYSF*PYLHIGHLQNVLEG Trigger: GCCTTCCAGGACATTCTGTAAATGTCCTATGTGCAGATATGGTCAAAACGAATAATTCAGGCCAACTGAGTGAACATTTCTCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505843.1 |
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| CDS-3UTR CAA 90 bp | CCATCTCTTCTTCTTTTAGACAGCAGAATTGAAGAGGAATATGAACCCATCAGGGTTCATGAATGGCAATaGACTGGGACCCAAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLLDSRIEEEYEPIRVHEWQ*TGTQIL Trigger: GAGAATTTGGGTCCCAGTCAATTGCCATTCATGAAC...CCTGATGGGTTCATATTCCTCTTCAATTCTGCTGTCTAAAAGAAGAAGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 90 bp | ATGTCTCCAAGATCTCAAGCATCTCTGGAGAAATGTTCACTCAGTTaGCCTGAATTATTCGTTTTGACCATATCTGCACATAGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: MSPRSQASLEKCSLS*PELFVLTISAHRTF Trigger: AAATGTCCTATGTGCAGATATGGTCAAAACGAATAATTCAGGCCAACTGAGTGAACATTTCTCCAGAGATGCTTGAGATCTTGGAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505843.1 |
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| CDS-3UTR CAA 90 bp | CAAATTACTGTCTCTCCCAGGGATTATTTGTATCAGGGATCAGGGAAGAAAGAATTGTTGCTAAAGTCATaGGGGGTTTTTGACACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QITVSPRDYLYQGSGKKELLLKS*GVFDTD Trigger: ATCTGTGTCAAAAACCCCCAATGACTTTAGCAACAA...TTCTTTCTTCCCTGATCCCTGATACAAATAATCCCTGGGAGAGACAGTAATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 72 bp | GGTCCCGCTTGGCTGGACTGTGCATTCGGAAGGGGCTaGGGCTTCTGTGGGAGTGGCTGGTGGAGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPAWLDCAFGRG*GFCGSGWWSST Trigger: TGTGGAGCTCCACCAGCCACTCCCACAGAAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 72 bp | AAGCTGAGCTTGATTTGGTCCCGCTTGGCTGGACTGTaGATTCGGAAGGGGCTGAGGCTTCTGTGGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KLSLIWSRLAGL*IRKGLRLLWEW Trigger: CCACTCCCACAGAAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 90 bp | GCTACAATGTGGGCAGAACACAAGCTGAGCTTGATTTGGTCCCGCTaGGCTGGACTGTGCATTCGGAAGGGGCTGAGGCTTCTGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATMWAEHKLSLIWSR*AGLCIRKGLRLLWE Trigger: CTCCCACAGAAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCTGCCCACATTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 72 bp | TTCACAGGGCAGCAGCTGAGCCTGGGCACTCTGAAATaGAGCCTCGTTAGTTGCCTGAAGACTGTAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: FTGQQLSLGTLK*SLVSCLKTVGP Trigger: GGGTCCTACAGTCTTCAGGCAACTAACGAGGCTGCATTTCAGAGTGCCCAGGCTCAGCTGCTGCCCTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 72 bp | CTGAGCCTGGGCACTCTGAAATGCAGCCTCGTTAGTTaGCTGAAGACTGTAGGACCCACTGCTGCTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSLGTLKCSLVS*LKTVGPTAAER Trigger: TCTCTCAGCAGCAGTGGGTCCTACAGTCTTCAGGCAACTAACGAGGCTGCATTTCAGAGTGCCCAGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | AGAACACAAGCTGAGCTTGATTTGGTCCCGCTTGGCTaGACTGTGCATTCGGAAGGGGCTGAGGCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTQAELDLVPLG*TVHSEGAEASV Trigger: CACAGAAGCCTCAGCCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | GCTACAATGTGGGCAGAACACAAGCTGAGCTTGATTTaGTCCCGCTTGGCTGGACTGTGCATTCGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATMWAEHKLSLI*SRLAGLCIRKG Trigger: CCCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCTGCCCACATTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 72 bp | GGCTACAATGTGGGCAGAACACAAGCTGAGCTTGATTaGGTCCCGCTTGGCTGGACTGTGCATTCGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GYNVGRTQAELD*VPLGWTVHSEG Trigger: CCCTTCCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCTGCCCACATTGTAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | CCCACTGCTGCTGAGAGACTGTGGTTTGGAGGGTTCTaGCCTCCTCAAATGCTTGGGCAACTTGCTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PTAAERLWFGGF*PPQMLGQLAVF Trigger: GAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGCCAGAACCCTCCAAACCACAGTCTCTCAGCAGCAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 72 bp | GATTCGGCTACAATGTGGGCAGAACACAAGCTGAGCTaGATTTGGTCCCGCTTGGCTGGACTGTGCATTCGG | + |
|
Preference number: 6 (lower is better) Translates to: DSATMWAEHKLS*IWSRLAGLCIR Trigger: CCGAATGCACAGTCCAGCCAAGCGGGACCAAATCAAGCTCAGCTTGTGTTCTGCCCACATTGTAGCCGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 90 bp | CTGCTGAGAGACTGTGGTTTGGAGGGTTCTGGCCTCCTCAAATGCTaGGGCAACTTGCTGTTTTCAATATGCCACTTCTGCAAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLRDCGLEGSGLLKC*GNLLFSICHFCKHW Trigger: CCAGTGCTTGCAGAAGTGGCATATTGAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGCCAGAACCCTCCAAACCACAGTCTCTCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 72 bp | GGGGTTCCACTACAAGCTTTCTTGAGGCCAGTAAGATaGTCAGAACTGTTTGAGTGTGGTGCTCTGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: GVPLQAFLRPVR*SELFECGALGP Trigger: GGGTCCCAGAGCACCACACTCAAACAGTTCTGATCATCTTACTGGCCTCAAGAAAGCTTGTAGTGGAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 72 bp | TACCTTAGCCTCACAGACCGTGACTCAGAGCTTCATTaGAGGACGGCAGTCTGGAATGTTGGAAAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: YLSLTDRDSELH*RTAVWNVGKSS Trigger: TGAGGACTTTCCAACATTCCAGACTGCCGTCCTGCAATGAAGCTCTGAGTCACGGTCTGTGAGGCTAAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296600.5 ENST00000504912.1 ENST00000505843.1 |
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| CDS GCA 72 bp | TTGAGTGTGGTGCTCTGGGACCCTCACCCTTTGGCTTaGAGCTTCTGTGATGAACAAGAAGATGATCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSVVLWDPHPLA*SFCDEQEDDLA Trigger: TGCCAGATCATCTTCTTGTTCATCACAGAAGCTGCAAGCCAAAGGGTGAGGGTCCCAGAGCACCACACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 72 bp | GCCACTTCTGCAAGCACTGGGGTTCATGAATGGCAATaGACTGGGACCCAAATTCTCGGCCACAGATATAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSASTGVHEWQ*TGTQILGHRYS Trigger: GCTATATCTGTGGCCGAGAATTTGGGTCCCAGTCAATTGCCATTCATGAACCCCAGTGCTTGCAGAAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 72 bp | CCACTTCTGCAAGCACTGGGGTTCATGAATGGCAATTaGCTGGGACCCAAATTCTCGGCCACAGATATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLLQALGFMNGN*LGPKFSATDIA Trigger: TGCTATATCTGTGGCCGAGAATTTGGGTCCCAGTCAATTGCCATTCATGAACCCCAGTGCTTGCAGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | ACCACATATGTAGCAGATAACAGTCCTTGGTCGGGCTaGGGTTCCACTACAAGCTTTCTTGAGGCCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: TTYVADNSPWSG*GSTTSFLEASK Trigger: CTTACTGGCCTCAAGAAAGCTTGTAGTGGAACCCCAGCCCGACCAAGGACTGTTATCTGCTACATATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | AGAGGGCACCACCAGGTTCACCTAATGCGTCTTGTGTaGCATGAATTACCTTATCAGTTACACTGGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGHHQVHLMRLV*HELPYQLHWVL Trigger: CAGCACCCAGTGTAACTGATAAGGTAATTCATGCCACACAAGACGCATTAGGTGAACCTGGTGGTGCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 72 bp | GACTGTGGTTTGGAGGGTTCTGGCCTCCTCAAATGCTaGGGCAACTTGCTGTTTTCAATATGCCACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: DCGLEGSGLLKC*GNLLFSICHFC Trigger: GCAGAAGTGGCATATTGAAAACAGCAAGTTGCCCAAGCATTTGAGGAGGCCAGAACCCTCCAAACCACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS TCA 72 bp | AGTTTTACAACTTCTCTGGTGTACCAGGAGGCGGTCTaGGGTAAAGATTCGGCTACAATGTGGGCAGAACAC | + |
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Preference number: 6 (lower is better) Translates to: SFTTSLVYQEAV*GKDSATMWAEH Trigger: GTGTTCTGCCCACATTGTAGCCGAATCTTTACCTCAGACCGCCTCCTGGTACACCAGAGAAGTTGTAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | GACCGTGACTCAGAGCTTCATTGCAGGACGGCAGTCTaGAATGTTGGAAAGTCCTCATTAAAGCTGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: DRDSELHCRTAV*NVGKSSLKLRC Trigger: ACATCTCAGCTTTAATGAGGACTTTCCAACATTCCAGACTGCCGTCCTGCAATGAAGCTCTGAGTCACGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296600.5 ENST00000504912.1 ENST00000505843.1 |
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| CDS GCA 72 bp | TGTGGCATGAATTACCTTATCAGTTACACTGGGTGCTaGCCTGTTCCTTTGCTGCTTGGAATTAGTGTACTC | + |
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Preference number: 6 (lower is better) Translates to: CGMNYLISYTGC*PVPLLLGISVL Trigger: GAGTACACTAATTCCAAGCAGCAAAGGAACAGGGCAGCACCCAGTGTAACTGATAAGGTAATTCATGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CCA 72 bp | AAATTCCTTACCACATATGTAGCAGATAACAGTCCTTaGTCGGGCTGGGGTTCCACTACAAGCTTTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: KFLTTYVADNSP*SGWGSTTSFLE Trigger: CTCAAGAAAGCTTGTAGTGGAACCCCAGCCCGACCAAGGACTGTTATCTGCTACATATGTGGTAAGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS GCA 72 bp | TTGTGTGGCATGAATTACCTTATCAGTTACACTGGGTaGTGCCCTGTTCCTTTGCTGCTTGGAATTAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LCGMNYLISYTG*CPVPLLLGISV Trigger: TACACTAATTCCAAGCAGCAAAGGAACAGGGCAGCACCCAGTGTAACTGATAAGGTAATTCATGCCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 72 bp | AAGGCTAGAATAGGAGTCACTAGAGAGAAGCCCAGCTaGGTTGATAAGGAAAGTGGGTTCTTTAGAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: KARIGVTREKPS*VDKESGFFRMV Trigger: CACCATTCTAAAGAACCCACTTTCCTTATCAACCAAGCTGGGCTTCTCTCTAGTGACTCCTATTCTAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296600.5 ENST00000504912.1 |
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| CDS CAA 90 bp | ATTACCTTATCAGTTACACTGGGTGCTGCCCTGTTCCTTTGCTGCTaGGAATTAGTGTACTCTTTTAGGCCTCCTTTACTCCCTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: ITLSVTLGAALFLCC*ELVYSFRPPLLPKF Trigger: GAATTTAGGGAGTAAAGGAGGCCTAAAAGAGTACACTAATTCCAAGCAGCAAAGGAACAGGGCAGCACCCAGTGTAACTGATAAGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296600.5 |
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| CDS CAA 90 bp | GCATCTCTGGAGAAATGTTCACTCAGTTGGCCTGAATTATTCGTTTaGACCATATCTGCACATAGGACATTTACAGAATGTCCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ASLEKCSLSWPELFV*TISAHRTFTECPGR Trigger: CCTTCCAGGACATTCTGTAAATGTCCTATGTGCAGATATGGTCAAAACGAATAATTCAGGCCAACTGAGTGAACATTTCTCCAGAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505843.1 |
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| CDS CCA 72 bp | CTTTATATTTTCACCAGGATTAACACTCTCTGTTTCTaGGGAAAGGCTAGAATAGGAGTCACTAGAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LYIFTRINTLCF*GKARIGVTREK Trigger: CTTCTCTCTAGTGACTCCTATTCTAGCCTTTCCCCAGAAACAGAGAGTGTTAATCCTGGTGAAAATATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296600.5 ENST00000504912.1 |
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