RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF473 (Homo sapiens)

Ensembl gene IDs: ENSG00000142528

Ensembl transcript IDs: ENST00000270617.8, ENST00000391821.6, ENST00000445728.7, ENST00000594968.1, ENST00000595661.5, ENST00000598802.1, ENST00000598809.5, ENST00000599155.1, ENST00000601364.5

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACACAGGTGACTaGTTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCAT +
Preference number: 1 (lower is better)
Translates to: HTEGVSTLACSNTGD*FTDCPHTQWLPVFH
Trigger: ATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 90 bp TGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACACAGGTaGCTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTT +
Preference number: 1 (lower is better)
Translates to: CTHGGRFYLGLQQHR*LIYRLPPHPMAASF
Trigger: AAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR GCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCCCTATTGTGTCACAGCCCTGCAACA +
Preference number: 1 (lower is better)
Translates to: ATQVTDLQTAPTPNG*QFSIESLLCHSPAT
Trigger: TGTTGCAGGGCTGTGACACAATAGGGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp GGCAGGGAACAAACACCCAGAGCTGACAAGACACTGGTAGGGAACTaGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGT +
Preference number: 1 (lower is better)
Translates to: GREQTPRADKTLVGN*LCGSISLDSPTILG
Trigger: ACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGTTCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR GCA 90 bp TGTCACAGCCCTGCAACACTTTGTACACTCTTTTGGTATACAACATaGCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCAT +
Preference number: 1 (lower is better)
Translates to: CHSPATLCTLFWYTT*PSPRQDRAPEDGNH
Trigger: ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp TTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGG +
Preference number: 1 (lower is better)
Translates to: FISDSRSFRAVVHSV*ILPAPEPSKLPGER
Trigger: CCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp ATCAGAGAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTaGCCTGCAGCAACACAGGTGACTGATTTACAGACTGCCCCCACA +
Preference number: 1 (lower is better)
Translates to: IREPTNMHTRRAFLP*PAATQVTDLQTAPT
Trigger: TGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp GAGTCCCTATTGTGTCACAGCCCTGCAACACTTTGTACACTCTTTTaGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: ESLLCHSPATLCTLF*YTTCPSPRQDRAPE
Trigger: CTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAATAGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR GCA 90 bp CAATGGCTGCCAGTTTTCCATAGAGTCCCTATTGTGTCACAGCCCTaGAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCC +
Preference number: 1 (lower is better)
Translates to: QWLPVFHRVPIVSQP*NTLYTLLVYNMPIS
Trigger: GGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAATAGGGACTCTATGGAAAACTGGCAGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp ACTGTTAAATGGAGGAAGGTCATAGGAAGAGGGAGCATGTGTTTGTaGGATAGGGAGTCCTCTTTAAGTGAGAAGCTTGGGAGGTTAGGA +
Preference number: 1 (lower is better)
Translates to: TVKWRKVIGRGSMCL*DRESSLSEKLGRLG
Trigger: TCCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGACCTTCCTCCATTTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 90 bp TGGACTCTCCAACAATCCTTGGTGATCCCAGAACTTCCTGTGACATaGGGGAATGTGGCATTTTCAAGATGTCACTTGTCAACTAACAGC +
Preference number: 1 (lower is better)
Translates to: WTLQQSLVIPELPVT*GNVAFSRCHLSTNS
Trigger: GCTGTTAGTTGACAAGTGACATCTTGAAAATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGATCACCAAGGATTGTTGGAGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 90 bp ACTAAGTTTAACAAACTTAACCAGCAGAACTCCAGGTGCAAGAGTTaGAAAGCCCAAGGGTGCAGAGCACTCACTCCCTCACCATTTTCA +
Preference number: 1 (lower is better)
Translates to: TKFNKLNQQNSRCKS*KAQGCRALTPSPFS
Trigger: TGAAAATGGTGAGGGAGTGAGTGCTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTTTGTTAAACTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp CCCATGAAAAATTGGGTGTCTTATTGCATAACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGG +
Preference number: 1 (lower is better)
Translates to: PMKNWVSYCITNTVK*RKVIGRGSMCLWDR
Trigger: CCTATCCCACAAACACATGCTCCCTCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGTTATGCAATAAGACACCCAATTTTTCATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp CTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTaGGTGTCTTATTGCATAACCAACACTGTTAAATGGAGGAAGGTC +
Preference number: 1 (lower is better)
Translates to: LMESSCVLVSTPMKN*VSYCITNTVKWRKV
Trigger: GACCTTCCTCCATTTAACAGTGTTGGTTATGCAATAAGACACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 90 bp TCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTaGTCACTCCTCTTAGCTCAGCTTCCTTTTTGGTTAGTTTCATTT +
Preference number: 1 (lower is better)
Translates to: SGTDGSRCLRDMSVI*SLLLAQLPFWLVSF
Trigger: AAATGAAACTAACCAAAAAGGAAGCTGAGCTAAGAGGAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601364.5
3UTR GCA 90 bp AAACTTTCTAATCAATCTTTAGATGCATTTATTTGGAGAGAAACTTaGAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTC +
Preference number: 1 (lower is better)
Translates to: KLSNQSLDAFIWRET*NGIVSNFQHPSNGL
Trigger: GAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTGATTAGAAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCTCCAGGTGCAAGAGTTaGAAAGCCCAAGGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCSRCKS*KAQGCR
Trigger: TCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGA...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 2 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGGCTTGTTGCTTCTGGGCATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: PSEESSWSQSHQGLLLLGIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...GCCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATGTGGCTTACACTTGGTaGGCCCTCATGTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: GNWLCGSISLDSPTILGDVAYTW*ALMCWP
Trigger: TGGCCAGCACATGAGGGCTCACCAAGTGTAAGCCAC...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR GCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCCCGAGCCTAGCAAATTaGCTGGTGAGCGGCCATCCT +
Preference number: 2 (lower is better)
Translates to: NWLCGSISLDSPTILGDPPSLAN*LVSGHP
Trigger: AGGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGG...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTCACACACCACAGGTTTaGCCCCTAAGTATGTCTTCC +
Preference number: 2 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFHTPQV*PLSMSS
Trigger: GGAAGACATACTTAGGGGTCAAACCTGTGGTGTGTG...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTCCCAGAACTTCCTGTaGCATGAGGGAATGTGGCAT +
Preference number: 2 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSQNFL*HEGMWH
Trigger: ATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR GCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACACCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCC +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATPTPNG*QFSIES
Trigger: GGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGG...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 2 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGAGGACACCGAGGCCCTaGGAGATTTTTCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: NLTSRTPGARVEKPKGAERTPRP*EIFLTF
Trigger: GAAGGTCAGAAAAATCTCTCAGGGCCTCGGTGTCCT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAACAAACACCCAGAGCTaGCAAGACACTGGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATTNTQS*QDTGRE
Trigger: TTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATATGATGACATCCCAGTaGTCACTTCCACACACCACA +
Preference number: 2 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHMMTSQ*SLPHTT
Trigger: TGTGGTGTGTGGAAGTGACCACTGGGATGTCATCAT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: SPGRILLRRNPPSEESSWSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...CCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR CAA 90 bp AGGGAACAAACACCCAGAGCTGACAAGACACTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGAT +
Preference number: 2 (lower is better)
Translates to: REQTPRADKTLVGNW*CGSISLDSPTILGD
Trigger: ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGGGAGTCCTCTTTAAGTaGGAAGCTTGGGAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEGVLFK*EAWEVR
Trigger: CCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCC...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCACTCCCATGAAAAATTaGGTGTCTTATTGCATAACC +
Preference number: 2 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCTPMKN*VSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAATGATGACATCCCAGTaGTCACTTCCACACACCACA +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATMMTSQ*SLPHTT
Trigger: TGTGGTGTGTGGAAGTGACCACTGGGATGTCATCAT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAACACTGGTAGGGAACTaGTTGTGTGGTTCCATCTCA +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATTLVGN*LCGSIS
Trigger: TGAGATGGAACCACACAACCAGTTCCCTACCAGTGT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 90 bp AGAGTCCCTATTGTGTCACAGCCCTGCAACACTTTGTACACTCTTTaGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: RVPIVSQPCNTLYTL*VYNMPISPTRQSSR
Trigger: TCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAATAGGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACATCAATGCAGCTTTCCTaGTGGAATCCAGCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATSMQLS*WNPAVF
Trigger: AAACACAGCTGGATTCCATCAGGAAAGCTGCATTGA...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR GCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTATTGTGTCACAGCCCTaGAACACTTTGTACACTCTT +
Preference number: 2 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFIVSQP*NTLYTL
Trigger: AAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAAT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 90 bp CCAGAGGACGGGAACCATGTGCGAGAAGTTAAATGTTGCAACCATTaGAAAAACAGTGTAAGGCCCCAATGGTTAGCCAACAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: PEDGNHVREVKCCNH*KNSVRPQWLANRFP
Trigger: TGGGAACCTGTTGGCTAACCATTGGGGCCTTACACTGTTTTTCAAATGGTTGCAACATTTAACTTCTCGCACATGGTTCCCGTCCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTAAGGTTGTAGCTAGTTaGGGTGAAGAGTTTACATGT +
Preference number: 2 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFKVVAS*GEEFTC
Trigger: ACATGTAAACTCTTCACCTCAACTAGCTACAACCTT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCGGAGTCCTCTTTAAGTaGGAAGCTTGGGAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELGVLFK*EAWEVR
Trigger: CCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCC...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCGTTTCAGCAAAGGTGTaGCTGAGCCACTTAGTGGCA +
Preference number: 2 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELVSAKV*LSHLVA
Trigger: TGCCACTAAGTGGCTCAGTCACACCTTTGCTGAAAC...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 2 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTATTTGTGCTATAGCTaGTGTGTATTTGTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFYLCYS*CVFVAY
Trigger: GTAAGCCACAAATACACATCAGCTATAGCACAAATA...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGACACTTAGGTAGTAGATaGCAGAGGTGGGATTTAACT +
Preference number: 2 (lower is better)
Translates to: WLCGSISLDSPTILGDPRHLGSR*QRWDLT
Trigger: AGTTAAATCCCACCTCTGCCATCTACTACCTAAGTG...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTGGGAGCATGTGTTTGTaGGATAGGGAGTCCTCTTTA +
Preference number: 2 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAGSMCL*DRESSL
Trigger: TAAAGAGGACTCCCTATCCCACAAACACATGCTCCC...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATAGTATGTCTTCCATATaGGTTGTTTCATATGCGGTT +
Preference number: 2 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSMSSI*VVSYAV
Trigger: AACCGCATATGAAACAACCCATATGGAAGACATACT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTGTGGTTCCATCTCACTaGACTCTCCAACAATCCTTG +
Preference number: 2 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAVVPSH*TLQQSL
Trigger: CAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCAC...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 90 bp AACACTGTTAAATGGAGGAAGGTCATAGGAAGAGGGAGCATGTGTTaGTGGGATAGGGAGTCCTCTTTAAGTGAGAAGCTTGGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: NTVKWRKVIGRGSMC*WDRESSLSEKLGRL
Trigger: TAACCTCCCAAGCTTCTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGACCTTCCTCCATTTAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCAGGACACCGAGGCCCTaGGAGATTTTTCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: CQLTAIVDENGFISDSRSRTPRP*EIFLTF
Trigger: GAAGGTCAGAAAAATCTCTCAGGGCCTCGGTGTCCT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCGAGAGAAACTTGCAATaGGATAGTTTCCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTERNLQ*DSFQLS
Trigger: TGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTC...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCGCTGATGTGTATTTGTaGCTTACACTTGGTGAGCCC +
Preference number: 2 (lower is better)
Translates to: VVSYAVNTLINAAFLMESADVYL*LTLGEP
Trigger: GGGCTCACCAAGTGTAAGCCACAAATACACATCAGC...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCTATTTGTGCTATAGCTaGTGTGTATTTGTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: NWLCGSISLDSPTILGDPYLCYS*CVFVAY
Trigger: GTAAGCCACAAATACACATCAGCTATAGCACAAATA...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGAAATGGGTTCATTTCTaGTTCCAGAAGCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKKWVHF*FQKLQS
Trigger: GCTCTGAAGCTTCTGGAATCAGAAATGAACCCATTT...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 90 bp AACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAGCTGTGTTTaGGTGTCAACTCCCATGAAAAATTGGGTGTCTTATTGCATAACC +
Preference number: 2 (lower is better)
Translates to: NTLINAAFLMESSCV*VSTPMKNWVSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATCAATGCAGCTTTCCTaGTGGAATCCAGCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: GFISDSRSFRAVVHSVWISMQLS*WNPAVF
Trigger: AAACACAGCTGGATTCCATCAGGAAAGCTGCATTGA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: VVSYAVNTLINAAFLMESSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCACTTAGGTAGTAGATaGCAGAGGTGGGATTTAACT +
Preference number: 2 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVHLGSR*QRWDLT
Trigger: AGTTAAATCCCACCTCTGCCATCTACTACCTAAGTG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCTCAATGCAGCTTTCCTaGTGGAATCCAGCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: CQLTAIVDENGFISDSRSSMQLS*WNPAVF
Trigger: AAACACAGCTGGATTCCATCAGGAAAGCTGCATTGA...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGGAGAGAAACTTGCAATaGGATAGTTTCCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKERNLQ*DSFQLS
Trigger: TGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTC...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VVSYAVNTLINAAFLMESTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 2 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCACTCCCATGAAAAATTaGGTGTCTTATTGCATAACC +
Preference number: 2 (lower is better)
Translates to: CQLTAIVDENGFISDSRSTPMKN*VSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 72 bp GGCGTTTCTACCTTGGCCTGCAGCAACACAGGTGACTaGTTTACAGACTGCCCCCACACCCAATGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: GVSTLACSNTGD*FTDCPHTQWLP
Trigger: TGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 72 bp GGAGGGCGTTTCTACCTTGGCCTGCAGCAACACAGGTaGCTGATTTACAGACTGCCCCCACACCCAATGGCT +
Preference number: 3 (lower is better)
Translates to: GGRFYLGLQQHR*LIYRLPPHPMA
Trigger: AGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp GTTCTTGGTCTCAGTCACATCAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACT +
Preference number: 3 (lower is better)
Translates to: VLGLSHIRACCF*ASSCQRLQIFT
Trigger: AGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTCTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTG +
Preference number: 3 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFLVGNW*CGSISL
Trigger: CAGTGAGATGGAACCACACAACCAGTTCCCTACCAG...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACACTCCAGGTGCAAGAGTaGAAAAGCCCAAGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATLQVQE*KSPRVQ
Trigger: CTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAG...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCATAGCTGATGTGTATTaGTGGCTTACACTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCIADVY*WLTLGE
Trigger: CTCACCAAGTGTAAGCCACAAATACACATCAGCTAT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTCCACACACCACAGGTTaGACCCCTAAGTATGTCTTC +
Preference number: 3 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFPHTTG*TPKYVF
Trigger: GAAGACATACTTAGGGGTCAAACCTGTGGTGTGTGG...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGAGAGGGAGCATGTGTTaGTGGGATAGGGAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: NLTSRTPGARVEKPKGAERGSMC*WDRESS
Trigger: AGAGGACTCCCTATCCCACAAACACATGCTCCCTCT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTACTCTCCAACAATCCTaGGTGATCCCAGAACTTCCT +
Preference number: 3 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFTLQQS*VIPELP
Trigger: AGGAAGTTCTGGGATCACCAAGGATTGTTGGAGAGT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR GCA 72 bp GTGACTGATTTACAGACTGCCCCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCCCTATTGTGTCACAGC +
Preference number: 3 (lower is better)
Translates to: VTDLQTAPTPNG*QFSIESLLCHS
Trigger: GCTGTGACACAATAGGGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp CCTTCCCAAGGTCACTTAGGTAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: PSQGHLGSRWQR*DLTQGRLAPEP
Trigger: AGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACCTTGGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp GATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAGCCTAGCAAATTGCCT +
Preference number: 3 (lower is better)
Translates to: DSRSFRAVVHSV*ILPAPEPSKLP
Trigger: AGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR GCA 72 bp CCTGCAACACTTTGTACACTCTTTTGGTATACAACATaGCCATCTCCCCGACAAGACAGAGCTCCAGAGGAC +
Preference number: 3 (lower is better)
Translates to: PATLCTLFWYTT*PSPRQDRAPED
Trigger: GTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp TGGAGGAAGGTCATAGGAAGAGGGAGCATGTGTTTGTaGGATAGGGAGTCCTCTTTAAGTGAGAAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: WRKVIGRGSMCL*DRESSLSEKLG
Trigger: CCCAAGCTTCTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGACCTTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp CCAACAAATATGCACACACGGAGGGCGTTTCTACCTTaGCCTGCAGCAACACAGGTGACTGATTTACAGACT +
Preference number: 3 (lower is better)
Translates to: PTNMHTRRAFLP*PAATQVTDLQT
Trigger: AGTCTGTAAATCAGTCACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp CTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGCTTGTTGCTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: LLRRNPPSEESS*SQSHQGLLLLG
Trigger: GCCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTATAGCTGATGTGTATTaGTGGCTTACACTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFIADVY*WLTLGE
Trigger: CTCACCAAGTGTAAGCCACAAATACACATCAGCTAT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGACTCTCCAACAATCCTaGGTGATCCCAGAACTTCCT +
Preference number: 3 (lower is better)
Translates to: NLTSRTPGARVEKPKGAETLQQS*VIPELP
Trigger: AGGAAGTTCTGGGATCACCAAGGATTGTTGGAGAGT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTATTTGTGGCTTACACTaGGTGAGCCCTCATGTGCTG +
Preference number: 3 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAICGLH*VSPHVL
Trigger: CAGCACATGAGGGCTCACCAAGTGTAAGCCACAAAT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGGAATCCAGCTGTGTTTaGGTGTCAACTCCCATGAAA +
Preference number: 3 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEESSCV*VSTPMK
Trigger: TTTCATGGGAGTTGACACCAAAACACAGCTGGATTC...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCCACACACCACAGGTTaGACCCCTAAGTATGTCTTC +
Preference number: 3 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELPHTTG*TPKYVF
Trigger: GAAGACATACTTAGGGGTCAAACCTGTGGTGTGTGG...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATAACTCCCATGAAAAATaGGGTGTCTTATTGCATAAC +
Preference number: 3 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHNSHEK*GVLLHN
Trigger: GTTATGCAATAAGACACCCAATTTTTCATGGGAGTT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAACTTTGTACACTCTTTaGGTATACAACATGCCCATC +
Preference number: 3 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSITLYTL*VYNMPI
Trigger: GATGGGCATGTTGTATACCAAAAGAGTGTACAAAGT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CCA 72 bp TTGTGTCACAGCCCTGCAACACTTTGTACACTCTTTTaGTATACAACATGCCCATCTCCCCGACAAGACAGA +
Preference number: 3 (lower is better)
Translates to: LCHSPATLCTLF*YTTCPSPRQDR
Trigger: TCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACATATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAATTTGTGGCTTACACTaGGTGAGCCCTCATGTGCTG +
Preference number: 3 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIICGLH*VSPHVL
Trigger: CAGCACATGAGGGCTCACCAAGTGTAAGCCACAAAT...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCTATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: NWLCGSISLDSPTILGDPYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR TCA 72 bp CAACAATCCTTGGTGATCCCAGAACTTCCTGTGACATaGGGGAATGTGGCATTTTCAAGATGTCACTTGTCA +
Preference number: 3 (lower is better)
Translates to: QQSLVIPELPVT*GNVAFSRCHLS
Trigger: TGACAAGTGACATCTTGAAAATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGATCACCAAGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGTATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp GCCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCAGCTCAGCTTCCTTTTaGGTTAGTTTCATTTTCTGG +
Preference number: 3 (lower is better)
Translates to: AFRNRWIQVFKRHVSNLVSSASF*VSFIFW
Trigger: CCAGAAAATGAAACTAACCAAAAAGGAAGCTGAGCT...GACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601364.5
3UTR CCA 72 bp CAGAAGCCATCCTTGGATAACATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGA +
Preference number: 3 (lower is better)
Translates to: QKPSLDNISIIS*ENPSSKKSSIR
Trigger: TCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGATGTTATCCAAGGATGGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR CCA 72 bp GATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTaGTCACTCCTCTTAGCTCAGCTTCCTTTTTGGTTA +
Preference number: 3 (lower is better)
Translates to: DGSRCLRDMSVI*SLLLAQLPFWL
Trigger: TAACCAAAAAGGAAGCTGAGCTAAGAGGAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601364.5
3UTR CCA 72 bp TCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTaGGTGTCTTATTGCATAACCAACACTGTTAAATGG +
Preference number: 3 (lower is better)
Translates to: SSCVLVSTPMKN*VSYCITNTVKW
Trigger: CCATTTAACAGTGTTGGTTATGCAATAAGACACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR-3UTR CAA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTAACTCCCATGAAAAATaGGGTGTCTTATTGCATAAC +
Preference number: 3 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCNSHEK*GVLLHN
Trigger: GTTATGCAATAAGACACCCAATTTTTCATGGGAGTT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCTCCTGCCAGAGGCTCCAGATCTTCACTGCCATCTGGGTGGGAGGTCAGGTTGTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PPARGSRSSLPSGWEVRLSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...CAACCTGACCTCCCACCCAGATGGCAGTGAAGATCTGGAGCCTCTGGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp CCAGAGGCTCCAGATCTTCACTGCCATCTGGGTGGGAGGTCAGGTTGGGTCTTGAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PEAPDLHCHLGGRSGWVLRACCF*ASSCQR
Trigger: CCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCT...CAAGACCCAACCTGACCTCCCACCCAGATGGCAGTGAAGATCTGGAGCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR TCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGTGGCTTACACTTGGTaGGCCCTCATGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGVAYTW*ALMCWP
Trigger: TGGCCAGCACATGAGGGCTCACCAAGTGTAAGCCAC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTCCTGCCAGAGGCTCCAGATCTTCACTGCCATCTGGGTGGGAGGTCAGGTTGGTGCTGTCTCACTGTGTaGCACTGGTGTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLPEAPDLHCHLGGRSGWCCLTV*HWCAEE
Trigger: CTCTTCTGCACACCAGTGTCACACAGTGAGACAGCA...CCAACCTGACCTCCCACCCAGATGGCAGTGAAGATCTGGAGCCTCTGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR GCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCCACATCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCHIRAC*FWASSC
Trigger: GCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTG...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCCCGAGCCTAGCAAATTaGCTGGTGAGCGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGPSLAN*LVSGHP
Trigger: AGGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGG...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAA +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATHADGG*GSSGTE
Trigger: TTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCCGCGAGAAGCTTCTCTaGGCGGCTGCACCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTREKLL*AAAPRI
Trigger: GATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCG...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTCCGTGTTCCCGGCTaGCAGGGCTGTGGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATLRVPG*QGCGKH
Trigger: GTGCTTCCCACAGCCCTGCCAGCCGGGAACACGGAG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR CCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCTGGTGCCGAGTAAGGTaGAAGATCCGGGTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCWCRVR*KIRVKA
Trigger: GGCTTTTACCCGGATCTTCCACCTTACTCGGCACCA...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATAGCACAAGGGAGCTGTaGGAAAGCCTCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSTREL*ESLPST
Trigger: GGTGGAAGGGAGGCTTTCTCACAGCTCCCTTGTGCT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGGGTTGAGCCGCAAATaGAGCGTTCTCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFGLSRK*SVLRTP
Trigger: AGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATGTTCCAGCCCGAGCTaGTCCCAGTCTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSICSSPS*SQSPKV
Trigger: CACCTTGGGAGACTGGGAGCAGCTCGGGCTGGAACA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTTTCCCAGAGGGCTGTaGGGGCGACTTCTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHFPRGL*GRLLSP
Trigger: AGGCGAAAGAAGTCGCCCGCACAGCCCTCTGGGAAA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGCTTCTCTGAGCGGCTaGACCCAGGATCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNASLSG*TQDPPR
Trigger: CCGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGC...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCCGGCTGAGGCTCGAGTaGCACCGAAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTRLRLE*HRKAFW
Trigger: CCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCG...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGGCTTGTTGCTTCTGGGGGCTGGCTGCTCTCCTaGGAAAAGCCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SIRGEFLVSVTSGLVASGGWLLS*EKPSRK
Trigger: CTTCCTGCTGGGCTTTTCCCAGGAGAGCAGCCAGCC...CCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAAGCACAAGGGAGCTGTaGGAAAGCCTCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATSTREL*ESLPST
Trigger: GGTGGAAGGGAGGCTTTCTCACAGCTCCCTTGTGCT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATACCAGGCTGTGTGTCATaGCTGGGTGGGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIPGCVS*LGGWSL
Trigger: TAGTGACCACCCACCCAGTCATGACACACAGCCTGG...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGGCTCCTCTCCAGCATaGAGAGCCTGGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHGSSPA*RAWCSM
Trigger: CATTGAACACCAGGCTCTTCATGCTGGAGAGGAGCC...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTCGATGTTCATTAAGGTaGGTGTGCCGGTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFRCSLR*VCRWKA
Trigger: GGCCTTCCACCGGCACACTCACCTTAATGAACATCG...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCGGTAGTTTCTCTGGGTaGAGACTCTGTCACACTTAC +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCGSFSG*RLCHTY
Trigger: GTAAGTGTGACAGAGTCTTCACCCAGAGAAACTACC...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPLLCTR*WRLRLE
Trigger: CTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAGTGGCTTACACTTGGTaGGCCCTCATGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIVAYTW*ALMCWP
Trigger: TGGCCAGCACATGAGGGCTCACCAAGTGTAAGCCAC...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGTTTCAGCAAAGGTGTaGCTGAGCCACTTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGVSAKV*LSHLVA
Trigger: TGCCACTAAGTGGCTCAGTCACACCTTTGCTGAAAC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCGCGAGAAGCTTCTCTaGGCGGCTGCACCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNREKLL*AAAPRI
Trigger: GATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCG...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCTGTTCCAGCCCGAGCTaGTCCCAGTCTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATCSSPS*SQSPKV
Trigger: CACCTTGGGAGACTGGGAGCAGCTCGGGCTGGAACA...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGTGTTCCAGCCCGAGCTaGTCCCAGTCTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAECSSPS*SQSPKV
Trigger: CACCTTGGGAGACTGGGAGCAGCTCGGGCTGGAACA...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGTGTGGATCTTCTGGTaGCGAGTAAGGTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGVWIFW*RVRWKI
Trigger: GATCTTCCACCTTACTCGGCACCAGAAGATCCACAC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCCTTCCCATCTCCTCCTaGTTCTTCAGCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGLPISS*FFSLST
Trigger: AGTGCTAAGGCTGAAGAAGCAGGAGGAGATGGGAAG...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGCCTCCCTTCCACCCATaGCTGACTCGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEPPFHP*LTRCPC
Trigger: GCATGGACAGCGAGTCAGCCATGGGTGGAAGGGAGG...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR CCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCAGGTGCTGGTTGAGATaGGCACTGAGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGRCWLR*ALRTKA
Trigger: AGCTTTTGTCCTCAGTGCCCATCTCAACCAGCACCT...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCGGCTGAGGCTCGAGTaGCACCGAAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDRLRLE*HRKAFW
Trigger: CCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGGCTTGTTGCTTCTGGGGGTCAGGTTGGGTCTTaGGGGGTCTTAGCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SIRGEFLVSVTSGLVASGGQVGS*GVLAGV
Trigger: GACTCCAGCTAAGACCCCCCAAGACCCAACCTGACC...CCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594968.1
3UTR CAA 72 bp AGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATaGCCTGGTGAGCGGCCATCCTGGATAAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: SVWILPAPEPSK*PGERPSWINGE
Trigger: TTCACCATTTATCCAGGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATACTCGCTGTCCATGCTaGCGAGCCCCCAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDTRCPC*RAPKMS
Trigger: GGACATTTTGGGGGCTCGTCAGCATGGACAGCGAGT...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGGCGATTGTTATCGCTaGAAGTCTCCTTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGGDCYR*KSPCIQ
Trigger: CTGAATGCAAGGAGACTTTCAGCGATAACAATCGCC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCTTCTGTTCTGGGTTCTaGTCCAAGATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGFCSGF*SKIFPL
Trigger: GAGTGGGAAGATCTTGGATCAGAACCCAGAACAGAA...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCTTCTTTGATGGTGAATaGGCCGAGTACTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCFFDGE*AEYFGQ
Trigger: TTGGCCAAAGTACTCGGCTCATTCACCATCAAAGAA...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCATCCTGGATAAATGGTaGATGATGACATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCILDKW*MMTSQW
Trigger: CCACTGGGATGTCATCATTCACCATTTATCCAGGAT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATACACATCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIHIRAC*FWASSC
Trigger: GCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTG...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCTTTTGGTATACAACATaGCCATCTCCCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCFWYTT*PSPRQD
Trigger: GTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAA...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGATTTCCCAGAGGGCTGTaGGGGCGACTTCTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRFPRGL*GRLLSP
Trigger: AGGCGAAAGAAGTCGCCCGCACAGCCCTCTGGGAAA...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACGGCTGGCAGGGCTGTaGGAAGCACAAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPRLAGL*EAQGSC
Trigger: ACAGCTCCCTTGTGCTTCCCACAGCCCTGCCAGCCG...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCGACTCTTGCATTCCGTaGGACTTTCCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTDSCIP*DFPRWW
Trigger: CCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTC...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTG +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSAATQ*LQAVLL
Trigger: CAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGTGGTTCCATCTCACTaGACTCTCCAACAATCCTTG +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGVVPSH*TLQQSL
Trigger: CAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCAC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAACCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGGTTTCTCCCCTTCCTaGACAGAATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPGFSPS*TESCWL
Trigger: CAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAACC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCCCTTGCTCACACTCTTaGTGGACAGTGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPPCSHS*WTVGFS
Trigger: GGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGG...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGGGCTCCTCTCCAGCATaGAGAGCCTGGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEGSSPA*RAWCSM
Trigger: CATTGAACACCAGGCTCTTCATGCTGGAGAGGAGCC...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATGGCTCCTCTCCAGCATaGAGAGCCTGGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDGSSPA*RAWCSM
Trigger: CATTGAACACCAGGCTCTTCATGCTGGAGAGGAGCC...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGATGTTCATTAAGGTaGGTGTGCCGGTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATRCSLR*VCRWKA
Trigger: GGCCTTCCACCGGCACACTCACCTTAATGAACATCG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGTGGCACTTCAGGGTTaGGCCGCAAATGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPVALQG*AANEAF
Trigger: GAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCAC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCGGTGTGCACTGTGGCTaGAGGTCTTTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATGVHCG*RSFRIR
Trigger: ACGAATGCGGAAAGACCTTCAGCCACAGTGCACACC...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGCACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAA +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWHADGG*GSSGTE
Trigger: TTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTG...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCATCCTGGATAAATGGTaGATGATGACATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGILDKW*MMTSQW
Trigger: CCACTGGGATGTCATCATTCACCATTTATCCAGGAT...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATACAAACACCCAGAGCTaGCAAGACACTGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHTNTQS*QDTGRE
Trigger: TTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCAGCAACACAGGTGACTaGTTTACAGACTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTSNTGD*FTDCPH
Trigger: GTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCT...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGTGTGGATCTTCTGGTaGCGAGTAAGGTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFVWIFW*RVRWKI
Trigger: GATCTTCCACCTTACTCGGCACCAGAAGATCCACAC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATATTCTGGGACTCTGCTaGCACCCAATGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDILGLC*HPMATG
Trigger: GCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAAT...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCTCCCTTCCACCCATaGCTGACTCGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAPPFHP*LTRCPC
Trigger: GCATGGACAGCGAGTCAGCCATGGGTGGAAGGGAGG...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR CCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCCGGCTGGCAGGGCTGTaGGAAGCACAAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESRLAGL*EAQGSC
Trigger: ACAGCTCCCTTGTGCTTCCCACAGCCCTGCCAGCCG...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTGGTCAGGTTGGGTCTTaGGGGGTCCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAGQVGS*GVQQEE
Trigger: CTCTTCCTGCTGGACCCCCCAAGACCCAACCTGACC...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGTCAGGTTGGGTCTTaGGGGGTCCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGQVGS*GVQQEE
Trigger: CTCTTCCTGCTGGACCCCCCAAGACCCAACCTGACC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGC +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSEESS*SQSHQG
Trigger: GCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCGACTCTTGCATTCCGTaGGACTTTCCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATDSCIP*DFPRWW
Trigger: CCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTC...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAAGGTCGCCTGGCACTTaGAACACTCATAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIRSPGT*NTHSVS
Trigger: GGAAACGCTATGAGTGTTCCAAGTGCCAGGCGACCT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCGGCTGAGGCTCGAGTaGCACCGAAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRARLRLE*HRKAFW
Trigger: CCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCG...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTG +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSISAATQ*LQAVLL
Trigger: CAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCATGCCGACATCCTTaGGGGTCACAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDPCRHP*GSQIPQ
Trigger: CTGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCCCATGCCGACATCCTTaGGGGTCACAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPPCRHP*GSQIPQ
Trigger: CTGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGGTTTCTCCCCTTCCTaGACAGAATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQGFSPS*TESCWL
Trigger: CAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAACC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAGGTTTCTCCCTAGTATaGGTGATCCAGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATGFSLV*VIQCWV
Trigger: TACCCAGCACTGGATCACTCATACTAGGGAGAAACC...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCTTGCTCACACTCTTaGTGGACAGTGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDPCSHS*WTVGFS
Trigger: GGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGCGATGTTCATTAAGGTaGGTGTGCCGGTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSERCSLR*VCRWKA
Trigger: GGCCTTCCACCGGCACACTCACCTTAATGAACATCG...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGGTTGAGCCGCAAATaGAGCGTTCTCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGLSRK*SVLRTP
Trigger: AGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATGTTTTTCTCTGGCGTaGACACTCTCGTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSICFSLA*TLSWHF
Trigger: GAAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCCACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAA +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSHADGG*GSSGTE
Trigger: TTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTG...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKLLCTR*WRLRLE
Trigger: CTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAA...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACACACACACCACAGGTTTaGCCCCTAAGTATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATHTPQV*PLSMSS
Trigger: GGAAGACATACTTAGGGGTCAAACCTGTGGTGTGTG...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATACACACACCACAGGTTTaGCCCCTAAGTATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIHTPQV*PLSMSS
Trigger: GGAAGACATACTTAGGGGTCAAACCTGTGGTGTGTG...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCACAAACACCCAGAGCTaGCAAGACACTGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPTNTQS*QDTGRE
Trigger: TTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATTCCAGGTGCAAGAGTTaGAAAGCCCAAGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDSRCKS*KAQGCR
Trigger: TCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGA...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATTGTTCCAGCCCGAGCTaGTCCCAGTCTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILLRRNPPSEESSWSQSHCSSPS*SQSPKV
Trigger: CACCTTGGGAGACTGGGAGCAGCTCGGGCTGGAACA...ATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR GCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGCACATCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEHIRAC*FWASSC
Trigger: GCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTG...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAATTCTGGGACTCTGCTaGCACCCAATGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQILGLC*HPMATG
Trigger: GCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAAT...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGAGAACCAACAAATATaGACACACGGAGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFENQQI*THGGRF
Trigger: GAAACGCCCTCCGTGTGTGCATATTTGTTGGTTCTC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGAAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRSRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCAGGTCAGGTTGGGTCTTaGGGGGTCCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSGTDGSRCLRDMSVIWSGQVGS*GVQQEE
Trigger: CTCTTCCTGCTGGACCCCCCAAGACCCAACCTGACC...TGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp TCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGGCTTATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SKKSSIRGEFLVSVTSGLIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...AAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCISIIS*ENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGAT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCAAACATTATGCACCATaGAATCTTCTCCCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCKHYAP*NLLPWK
Trigger: TTTCCACGGGAGAAGATTCCATGGTGCATAATGTTT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGCTGTGTGTCATGACTaGGTGGGTGGTCACTATCTT +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPAVCHD*VGGHYL
Trigger: AAGATAGTGACCACCCACCCAGTCATGACACACAGC...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGATGGTGCCGAGTAAGGTaGAAGATCCGGGTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRWCRVR*KIRVKA
Trigger: GGCTTTTACCCGGATCTTCCACCTTACTCGGCACCA...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAGGTGCTGGTTGAGATaGGCACTGAGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPRCWLR*ALRTKA
Trigger: AGCTTTTGTCCTCAGTGCCCATCTCAACCAGCACCT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAAGGTGCTGGTTGAGATaGGCACTGAGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIRCWLR*ALRTKA
Trigger: AGCTTTTGTCCTCAGTGCCCATCTCAACCAGCACCT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATAGGGCGTTTCTACCTTaGCCTGCAGCAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNRAFLP*PAATQV
Trigger: CACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCT...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp ACACCCAGAGCTGACAAGACACTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTGGACTCTCCAACAATC +
Preference number: 4 (lower is better)
Translates to: TPRADKTLVGNW*CGSISLDSPTI
Trigger: GATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCCTACCAGTGTCTTGTCAGCTCTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCATGCCGACATCCTTaGGGGTCACAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAPCRHP*GSQIPQ
Trigger: CTGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ATAATCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCCCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: IISWENPSSKKSSIRGEFPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...GAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR TCA 90 bp CCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: PSGTDGSRCLRDMSVIWSPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...TGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR TCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCGGTTTCTCCCCTTCCTaGACAGAATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELGFSPS*TESCWL
Trigger: CAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAACC...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGTTTCTCCCCTTCCTaGACAGAATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGFSPS*TESCWL
Trigger: CAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAACC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGGTTTCTCCCTAGTATaGGTGATCCAGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPGFSLV*VIQCWV
Trigger: TACCCAGCACTGGATCACTCATACTAGGGAGAAACC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCGGTTTCTCCCTAGTATaGGTGATCCAGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATGFSLV*VIQCWV
Trigger: TACCCAGCACTGGATCACTCATACTAGGGAGAAACC...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGGTGTTTTCTCAAGTTaGAGGTCGCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQGVFSS*RSPGTW
Trigger: CCAAGTGCCAGGCGACCTTCAACTTGAGAAAACACC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGCTCCTCTCCAGCATaGAGAGCCTGGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGSSPA*RAWCSM
Trigger: CATTGAACACCAGGCTCTTCATGCTGGAGAGGAGCC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCATGTCGCATCAGATGTaGGGGCCGGCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELMSHQM*GPAETP
Trigger: AGGAGTTTCAGCCGGCCCTCACATCTGATGCGACAT...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGACGTTCTCCGCACTCCTaGCATTCATATGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRRSPHS*HSYGVL
Trigger: CAAAACCCCATATGAATGTCAGGAGTGCGGAGAACG...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGATGTTTTTCTCTGGCGTaGACACTCTCGTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRCFSLA*TLSWHF
Trigger: GAAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACA...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTTCTGTTCTGGGTTCTaGTCCAAGATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPFCSGF*SKIFPL
Trigger: GAGTGGGAAGATCTTGGATCAGAACCCAGAACAGAA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGTGTGCACTGTGGCTaGAGGTCTTTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGVHCG*RSFRIR
Trigger: ACGAATGCGGAAAGACCTTCAGCCACAGTGCACACC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGGTAGTTTCTCTGGGTaGAGACTCTGTCACACTTAC +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPGSFSG*RLCHTY
Trigger: GTAAGTGTGACAGAGTCTTCACCCAGAGAAACTACC...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTATGCTTAGAAAGGCATaGGCTCTGACGGAACGTTTT +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFMLRKA*ALTERF
Trigger: AAAACGTTCCGTCAGAGCTCATGCCTTTCTAAGCAT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTAGGACACCGAGGCCCTaGGAGATTTTTCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLARTPRP*EIFLTF
Trigger: GAAGGTCAGAAAAATCTCTCAGGGCCTCGGTGTCCT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATGGAGTCCTCTTTAAGTaGGAAGCTTGGGAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDGVLFK*EAWEVR
Trigger: CCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCC...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCTCCCAGAACTTCCTGTaGCATGAGGGAATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPSQNFL*HEGMWH
Trigger: ATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGA...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGTTTCAGCAAAGGTGTaGCTGAGCCACTTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPVSAKV*LSHLVA
Trigger: TGCCACTAAGTGGCTCAGTCACACCTTTGCTGAAAC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTGTTCCAGCCCGAGCTaGTCCCAGTCTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWCSSPS*SQSPKV
Trigger: CACCTTGGGAGACTGGGAGCAGCTCGGGCTGGAACA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGTTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: FFEEILHQRRVLGLSHIRFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...CCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR GCA 90 bp GCCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCTTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: AFRNRWIQVFKRHVSNLVFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...GACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR GCA 90 bp TTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGCACATCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FFEEILHQRRVLGLSHIRHIRAC*FWASSC
Trigger: GCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTG...CCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR GCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTTCCCATCTCCTCCTaGTTCTTCAGCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATLPISS*FFSLST
Trigger: AGTGCTAAGGCTGAAGAAGCAGGAGGAGATGGGAAG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCGCAGCGACTTCCTGTaGGCGAGAAGCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVRSDFL*ARSFSE
Trigger: CTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGGTCAGGTTGGGTCTTaGGGGGTCCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWGQVGS*GVQQEE
Trigger: CTCTTCCTGCTGGACCCCCCAAGACCCAACCTGACC...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRASLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GCCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: AFRNRWIQVFKRHVSNLVIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...GACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGATCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGC +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRSEESS*SQSHQG
Trigger: GCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGA...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDWDFPR*WQYQTS
Trigger: TGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCA...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTAGGTCGCCTGGCACTTaGAACACTCATAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLARSPGT*NTHSVS
Trigger: GGAAACGCTATGAGTGTTCCAAGTGCCAGGCGACCT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCATGAGCCGAGTACTTTaGCCAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPMSRVL*PKAFPH
Trigger: GTGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCAT...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGATGAGCCGAGTACTTTaGCCAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEMSRVL*PKAFPH
Trigger: GTGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCAT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTG +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQSAATQ*LQAVLL
Trigger: CAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGAAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAGGGAGCATGTGTTTGTaGGATAGGGAGTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIGSMCL*DRESSL
Trigger: TAAAGAGGACTCCCTATCCCACAAACACATGCTCCC...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAATGATGACATCCCAGTaGTCACTTCCACACACCACA +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIMMTSQ*SLPHTT
Trigger: TGTGGTGTGTGGAAGTGACCACTGGGATGTCATCAT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCGTGGTTCCATCTCACTaGACTCTCCAACAATCCTTG +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTVVPSH*TLQQSL
Trigger: CAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCAC...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTTGCCCCCACACCCAATaGCTGCCAGTTTTCCATAGA +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLACPHTQ*LPVFHR
Trigger: TCTATGGAAAACTGGCAGCCATTGGGTGTGGGGGCA...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp CCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGGCTTGTTGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSKKSSIRGEF*VSVTSGLVASG
Trigger: CCCAGAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGCCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCCGGTGGACACAGGACTaGGTCCTCTCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPRWTQD*VLSLIH
Trigger: ATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCG...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGCCTTGCTCACACTCTTaGTGGACAGTGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKPCSHS*WTVGFS
Trigger: GGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGG...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCCAGGCTGTGTGTCATaGCTGGGTGGGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGPGCVS*LGGWSL
Trigger: TAGTGACCACCCACCCAGTCATGACACACAGCCTGG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAATCTTCCCACACTCCTaGCACTCAGAGGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATIFPHS*HSEVVF
Trigger: AAAAACTACCTCTGAGTGTCAGGAGTGTGGGAAGAT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCCGATGTTCATTAAGGTaGGTGTGCCGGTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESRCSLR*VCRWKA
Trigger: GGCCTTCCACCGGCACACTCACCTTAATGAACATCG...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCATGTCGCATCAGATGTaGGGGCCGGCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESMSHQM*GPAETP
Trigger: AGGAGTTTCAGCCGGCCCTCACATCTGATGCGACAT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGGCGATTGTTATCGCTaGAAGTCTCCTTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPGDCYR*KSPCIQ
Trigger: CTGAATGCAAGGAGACTTTCAGCGATAACAATCGCC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAACGTTCTCCGCACTCCTaGCATTCATATGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQRSPHS*HSYGVL
Trigger: CAAAACCCCATATGAATGTCAGGAGTGCGGAGAACG...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCGTTCTCCGCACTCCTaGCATTCATATGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNRSPHS*HSYGVL
Trigger: CAAAACCCCATATGAATGTCAGGAGTGCGGAGAACG...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGGTGGCACTTCAGGGTTaGGCCGCAAATGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVVALQG*AANEAF
Trigger: GAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCAC...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGTGTTTTTCTCTGGCGTaGACACTCTCGTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSECFSLA*TLSWHF
Trigger: GAAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACA...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGGTAGTTTCTCTGGGTaGAGACTCTGTCACACTTAC +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPGSFSG*RLCHTY
Trigger: GTAAGTGTGACAGAGTCTTCACCCAGAGAAACTACC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCATGCTTAGAAAGGCATaGGCTCTGACGGAACGTTTT +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPMLRKA*ALTERF
Trigger: AAAACGTTCCGTCAGAGCTCATGCCTTTCTAAGCAT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGLLCTR*WRLRLE
Trigger: CTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTGTGGCTTACACTTGGTaGGCCCTCATGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGVAYTW*ALMCWP
Trigger: TGGCCAGCACATGAGGGCTCACCAAGTGTAAGCCAC...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGGGAGTCCTCTTTAAGTaGGAAGCTTGGGAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEGVLFK*EAWEVR
Trigger: CCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCC...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTAAATGGGTTCATTTCTaGTTCCAGAAGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFKWVHF*FQKLQS
Trigger: GCTCTGAAGCTTCTGGAATCAGAAATGAACCCATTT...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGGTTTCAGCAAAGGTGTaGCTGAGCCACTTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEVSAKV*LSHLVA
Trigger: TGCCACTAAGTGGCTCAGTCACACCTTTGCTGAAAC...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTAGCAACACAGGTGACTaGTTTACAGACTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRASNTGD*FTDCPH
Trigger: GTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AATCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTCCATGCCGACATCCTTaGGGGTCACAAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: NLLGESFFEEILHQRRVLPCRHP*GSQIPR
Trigger: CCGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...AAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR GCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGTGTGGATCTTCTGGTaGCGAGTAAGGTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNVWIFW*RVRWKI
Trigger: GATCTTCCACCTTACTCGGCACCAGAAGATCCACAC...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTGATGGCTTTCCCTTaGTCACCCCATTTATACAGC +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATLMAFP*SPHLYS
Trigger: GCTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGGCTACAGGCAGTATTaGTGCTTGTTGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNGYRQY*CLLCTR
Trigger: GCGTGTACACAACAAGCAGCAATACTGCCTGTAGCC...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATACCGAGCCTAGCAAATTaGCTGGTGAGCGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIPSLAN*LVSGHP
Trigger: AGGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGG...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAGGACGGGAACCATGTaGGAGAAGTTAAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPRTGTM*EKLNVA
Trigger: TGCAACATTTAACTTCTCGCACATGGTTCCCGTCCT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACATTTTGGTATACAACATaGCCATCTCCCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATFWYTT*PSPRQD
Trigger: GTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAA...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAPTPNG*QFSIES
Trigger: GGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGG...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGCCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKPTPNG*QFSIES
Trigger: GGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGG...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATACGCAGCGACTTCCTGTaGGCGAGAAGCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIRSDFL*ARSFSE
Trigger: CTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCG...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TCTATAATCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTGTGTGACACTGGTGTaGAGAAGAGGGCGACACAGC +
Preference number: 4 (lower is better)
Translates to: SIISWENPSSKKSSIRGECVTLV*RRGRHS
Trigger: GCTGTGTCGCCCTCTTCTGCACACCAGTGTCACACA...CTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGTCAGCCATGGCCAACTaGGGTTCAGTAGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSESAMAN*GSVASF
Trigger: AAAAGAGGCTACTGAACCCCAGTTGGCCATGGCTGA...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLRRNPPSEESSWSQSHQSRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...CTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp GCCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: AFRNRWIQVFKRHVSNLVSRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...GACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp CCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCATCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSGTDGSRCLRDMSVIWSSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...TGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWRACCF*ASSCQR
Trigger: CCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CATGTCAGTAATCTGGTCACTCCTCTTAGCTCAGCTTCCTTTTTGGTTAGTTTCAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HVSNLVTPLSSASFLVSFRACCF*ASSCQR
Trigger: CCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCT...GAAACTAACCAAAAAGGAAGCTGAGCTAAGAGGAGTGACCAGATTACTGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPDFPRW*QYQTSE
Trigger: TTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCATGGAATCTTCTCCCGTaGAAACGGTGGACACAGGAC +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPWNLLP*KRWTQD
Trigger: GTCCTGTGTCCACCGTTTCCACGGGAGAAGATTCCA...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCATGGTGCCGAGTAAGGTaGAAGATCCGGGTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPWCRVR*KIRVKA
Trigger: GGCTTTTACCCGGATCTTCCACCTTACTCGGCACCA...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCAGGTCGCCTGGCACTTaGAACACTCATAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELRSPGT*NTHSVS
Trigger: GGAAACGCTATGAGTGTTCCAAGTGCCAGGCGACCT...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTATGAGCCGAGTACTTTaGCCAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAMSRVL*PKAFPH
Trigger: GTGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCAT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGAGCTGATGTGTATTTGTaGCTTACACTTGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRADVYL*LTLGEP
Trigger: GGGCTCACCAAGTGTAAGCCACAAATACACATCAGC...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATGTGGTTCCATCTCACTaGACTCTCCAACAATCCTTG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDVVPSH*TLQQSL
Trigger: CAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCAC...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCCTTTGTACACTCTTTTaGTATACAACATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGLCTLF*YTTCPS
Trigger: AGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTTGCCCCCACACCCAATaGCTGCCAGTTTTCCATAGA +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRACPHTQ*LPVFHR
Trigger: TCTATGGAAAACTGGCAGCCATTGGGTGTGGGGGCA...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCACTCGCTGTCCATGCTaGCGAGCCCCCAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSTRCPC*RAPKMS
Trigger: GGACATTTTGGGGGCTCGTCAGCATGGACAGCGAGT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTCCTTCCACCCATGGCTaGCTCGCTGTCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCPSTHG*LAVHAD
Trigger: GTCAGCATGGACAGCGAGTCAGCCATGGGTGGAAGG...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp TCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACTCCCATGCCGACATCCTTaGGGGTCACAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGTDGSRCLRDMSVIWSLPCRHP*GSQIPQ
Trigger: CTGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...GAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCCCCAGTCTCCCAAGGTaGAGTCCATGCCGACATCCT +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSPSLPR*SPCRHP
Trigger: AGGATGTCGGCATGGACTTCACCTTGGGAGACTGGG...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTGGTTTCTCCCTAGTATaGGTGATCCAGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAGFSLV*VIQCWV
Trigger: TACCCAGCACTGGATCACTCATACTAGGGAGAAACC...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCATCTTCCCACACTCCTaGCACTCAGAGGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATIFPHS*HSEVVF
Trigger: AAAAACTACCTCTGAGTGTCAGGAGTGTGGGAAGAT...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGATGTCGCATCAGATGTaGGGGCCGGCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWMSHQM*GPAETP
Trigger: AGGAGTTTCAGCCGGCCCTCACATCTGATGCGACAT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGGCGATTGTTATCGCTaGAAGTCTCCTTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQGDCYR*KSPCIQ
Trigger: CTGAATGCAAGGAGACTTTCAGCGATAACAATCGCC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTGTGGCACTTCAGGGTTaGGCCGCAAATGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGVALQG*AANEAF
Trigger: GAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCAC...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCATGTTTTTCTCTGGCGTaGACACTCTCGTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPCFSLA*TLSWHF
Trigger: GAAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACA...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCATGCTTAGAAAGGCATaGGCTCTGACGGAACGTTTT +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPMLRKA*ALTERF
Trigger: AAAACGTTCCGTCAGAGCTCATGCCTTTCTAAGCAT...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTHADGG*GSSGTE
Trigger: TTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGATCAATGCAGCTTTCCTaGTGGAATCCAGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: WLCGSISLDSPTILGDPRSMQLS*WNPAVF
Trigger: AAACACAGCTGGATTCCATCAGGAAAGCTGCATTGA...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTTCCCAGAACTTCCTGTaGCATGAGGGAATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRASQNFL*HEGMWH
Trigger: ATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGA...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAGCAACACAGGTGACTaGTTTACAGACTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESSNTGD*FTDCPH
Trigger: GTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGCT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCACATCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGHIRAC*FWASSC
Trigger: GCAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCCTCAGAGGTAGTTTTTaGAGCGTGAGTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTLRGSF*SVSFLM
Trigger: CATCAGAAAACTCACGCTGCAAAAACTACCTCTGAG...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAACTGATGGCTTTCCCTTaGTCACCCCATTTATACAGC +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQLMAFP*SPHLYS
Trigger: GCTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAG...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGGGCTACAGGCAGTATTaGTGCTTGTTGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKGYRQY*CLLCTR
Trigger: GCGTGTACACAACAAGCAGCAATACTGCCTGTAGCC...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTATTCTGGGACTCTGCTaGCACCCAATGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGILGLC*HPMATG
Trigger: GCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAAT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGCTTCTCTGAGCGGCTaGACCCAGGATCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTASLSG*TQDPPR
Trigger: CCGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVSRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGGGCTTGTTTCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGC +
Preference number: 4 (lower is better)
Translates to: KKSSIRGEFLVSVTSGLVSEESS*SQSHQG
Trigger: GCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGA...AACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQDFPRW*QYQTSE
Trigger: TTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELWDFPR*WQYQTS
Trigger: TGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCA...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAGACTCTTGCATTCCGTaGGACTTTCCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIDSCIP*DFPRWW
Trigger: CCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTC...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTTCCTTAGACTTAGCTaGTGTGAGGGTCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPFLRLS*CEGLFR
Trigger: TCTGAAAAGACCCTCACACCAGCTAAGTCTAAGGAA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTGTGTCATGACTGGGTaGGTGGTCACTATCTTGACT +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNCVMTG*VVTILT
Trigger: AGTCAAGATAGTGACCACCCACCCAGTCATGACACA...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTGCTGTGTGTCATGACTaGGTGGGTGGTCACTATCTT +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAAVCHD*VGGHYL
Trigger: AAGATAGTGACCACCCACCCAGTCATGACACACAGC...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTTTCTGCGGTGTGAATaGCCTGATGTCGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNFLRCE*PDVASD
Trigger: ATCTGATGCGACATCAGGCCATTCACACCGCAGAAA...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGTCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTG +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVSAATQ*LQAVLL
Trigger: CAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGA...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRANGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGGCTGATGTGTATTTGTaGCTTACACTTGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEADVYL*LTLGEP
Trigger: GGGCTCACCAAGTGTAAGCCACAAATACACATCAGC...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGGTAGTGCATAGTGTATaGATACTACCCGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVVVHSV*ILPAPE
Trigger: CTCGGGGGCGGGTAGTATCCATACACTATGCACTAC...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTACACTGGTAGGGAACTaGTTGTGTGGTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLATLVGN*LCGSIS
Trigger: TGAGATGGAACCACACAACCAGTTCCCTACCAGTGT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATACACTGGTAGGGAACTaGTTGTGTGGTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNTLVGN*LCGSIS
Trigger: TGAGATGGAACCACACAACCAGTTCCCTACCAGTGT...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCCTTGCTCACACTCTTaGTGGACAGTGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGPCSHS*WTVGFS
Trigger: GGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGGTGTTTTCTCAAGTTaGAGGTCGCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWGVFSS*RSPGTW
Trigger: CCAAGTGCCAGGCGACCTTCAACTTGAGAAAACACC...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTGGGTTGAGCCGCAAATaGAGCGTTCTCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCGLSRK*SVLRTP
Trigger: AGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCC...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTTCTTTGATGGTGAATaGGCCGAGTACTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNFFDGE*AEYFGQ
Trigger: TTGGCCAAAGTACTCGGCTCATTCACCATCAAAGAA...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTTTCTTTGATGGTGAATaGGCCGAGTACTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAFFDGE*AEYFGQ
Trigger: TTGGCCAAAGTACTCGGCTCATTCACCATCAAAGAA...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCGGTGTGCACTGTGGCTaGAGGTCTTTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSGVHCG*RSFRIR
Trigger: ACGAATGCGGAAAGACCTTCAGCCACAGTGCACACC...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCLLCTR*WRLRLE
Trigger: CTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAAGGACACCGAGGCCCTaGGAGATTTTTCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIRTPRP*EIFLTF
Trigger: GAAGGTCAGAAAAATCTCTCAGGGCCTCGGTGTCCT...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCAATGCAGCTTTCCTaGTGGAATCCAGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQSMQLS*WNPAVF
Trigger: AAACACAGCTGGATTCCATCAGGAAAGCTGCATTGA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGCTGATGGCTTTCCCTTaGTCACCCCATTTATACAGC +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKLMAFP*SPHLYS
Trigger: GCTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAG...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGGGCTACAGGCAGTATTaGTGCTTGTTGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVGYRQY*CLLCTR
Trigger: GCGTGTACACAACAAGCAGCAATACTGCCTGTAGCC...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCATTCTGGGACTCTGCTaGCACCCAATGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSILGLC*HPMATG
Trigger: GCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAAT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGATTGTGTCACAGCCCTaGAACACTTTGTACACTCTT +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEIVSQP*NTLYTL
Trigger: AAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAAT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACTCTCAGCCATGGCCAACTaGGGTTCAGTAGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SGTDGSRCLRDMSVIWSLSAMAN*GSVASF
Trigger: AAAAGAGGCTACTGAACCCCAGTTGGCCATGGCTGA...GAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWISRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTAGCAGGAAGAGGTCCTaGCAATTGTCCAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGSRKRS*QLSNAV
Trigger: CACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAAGGCTTCTCCGAAATTaGAGTTCCAGAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPRLLRN*SSRSHP
Trigger: AGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCT...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKDFPRW*QYQTSE
Trigger: TTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTC...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATGGAATCTTCTCCCGTaGAAACGGTGGACACAGGAC +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIWNLLP*KRWTQD
Trigger: GTCCTGTGTCCACCGTTTCCACGGGAGAAGATTCCA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAACATTATGCACCATaGAATCTTCTCCCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPKHYAP*NLLPWK
Trigger: TTTCCACGGGAGAAGATTCCATGGTGCATAATGTTT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCTGTGTCATGACTGGGTaGGTGGTCACTATCTTGACT +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELCVMTG*VVTILT
Trigger: AGTCAAGATAGTGACCACCCACCCAGTCATGACACA...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGTGTGTCATGACTGGGTaGGTGGTCACTATCTTGACT +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKCVMTG*VVTILT
Trigger: AGTCAAGATAGTGACCACCCACCCAGTCATGACACA...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATGGTGCCGAGTAAGGTaGAAGATCCGGGTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIWCRVR*KIRVKA
Trigger: GGCTTTTACCCGGATCTTCCACCTTACTCGGCACCA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGAGGTCGCCTGGCACTTaGAACACTCATAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWRSPGT*NTHSVS
Trigger: GGAAACGCTATGAGTGTTCCAAGTGCCAGGCGACCT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCATTTCTGCGGTGTGAATaGCCTGATGTCGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPFLRCE*PDVASD
Trigger: ATCTGATGCGACATCAGGCCATTCACACCGCAGAAA...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCCAACGGCTTCTTTCTaGCATGAGTTCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVPTASF*HEFAHA
Trigger: AGCATGAGCGAACTCATGCCAGAAAGAAGCCGTTGG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCACTTAGGTAGTAGATaGCAGAGGTGGGATTTAACT +
Preference number: 4 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATHLGSR*QRWDLT
Trigger: AGTTAAATCCCACCTCTGCCATCTACTACCTAAGTG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCACTTAGGTAGTAGATaGCAGAGGTGGGATTTAACT +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDHLGSR*QRWDLT
Trigger: AGTTAAATCCCACCTCTGCCATCTACTACCTAAGTG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTACACTGGTAGGGAACTaGTTGTGTGGTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRATLVGN*LCGSIS
Trigger: TGAGATGGAACCACACAACCAGTTCCCTACCAGTGT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp ATGACATCCCAGTGGTCACTTCCACACACCACAGGTTaGACCCCTAAGTATGTCTTCCATATGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: MTSQWSLPHTTG*TPKYVFHMGCF
Trigger: GAAACAACCCATATGGAAGACATACTTAGGGGTCAAACCTGTGGTGTGTGGAAGTGACCACTGGGATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp ATTGTGTCACAGCCCTGCAACACTTTGTACACTCTTTaGGTATACAACATGCCCATCTCCCCGACAAGACAG +
Preference number: 4 (lower is better)
Translates to: IVSQPCNTLYTL*VYNMPISPTRQ
Trigger: CTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp ACACCCAATGGCTGCCAGTTTTCCATAGAGTCCCTATaGTGTCACAGCCCTGCAACACTTTGTACACTCTTT +
Preference number: 4 (lower is better)
Translates to: TPNGCQFSIESL*CHSPATLCTLF
Trigger: AAAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAATAGGGACTCTATGGAAAACTGGCAGCCATTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCGGTGGACACAGGACTaGGTCCTCTCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVRWTQD*VLSLIH
Trigger: ATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCGGCGATTGTTATCGCTaGAAGTCTCCTTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESGDCYR*KSPCIQ
Trigger: CTGAATGCAAGGAGACTTTCAGCGATAACAATCGCC...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGGTTGAGCCGCAAATaGAGCGTTCTCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGLSRK*SVLRTP
Trigger: AGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGTTCTGTTCTGGGTTCTaGTCCAAGATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVFCSGF*SKIFPL
Trigger: GAGTGGGAAGATCTTGGATCAGAACCCAGAACAGAA...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCTATTTGTGCTATAGCTaGTGTGTATTTGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTYLCYS*CVFVAY
Trigger: GTAAGCCACAAATACACATCAGCTATAGCACAAATA...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATATTTGTGCTATAGCTaGTGTGTATTTGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIYLCYS*CVFVAY
Trigger: GTAAGCCACAAATACACATCAGCTATAGCACAAATA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAAGGTTGTAGCTAGTTaGGGTGAAGAGTTTACATGT +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPKVVAS*GEEFTC
Trigger: ACATGTAAACTCTTCACCTCAACTAGCTACAACCTT...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTATCCTGGATAAATGGTaGATGATGACATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRAILDKW*MMTSQW
Trigger: CCACTGGGATGTCATCATTCACCATTTATCCAGGAT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGAAATGGGTTCATTTCTaGTTCCAGAAGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEKWVHF*FQKLQS
Trigger: GCTCTGAAGCTTCTGGAATCAGAAATGAACCCATTT...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTCCCAGAACTTCCTGTaGCATGAGGGAATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWSQNFL*HEGMWH
Trigger: ATGCCACATTCCCTCATGTCACAGGAAGTTCTGGGA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCTCAGAGGTAGTTTTTaGAGCGTGAGTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNLRGSF*SVSFLM
Trigger: CATCAGAAAACTCACGCTGCAAAAACTACCTCTGAG...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTGGCTACAGGCAGTATTaGTGCTTGTTGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGGYRQY*CLLCTR
Trigger: GCGTGTACACAACAAGCAGCAATACTGCCTGTAGCC...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCCCGAGCCTAGCAAATTaGCTGGTGAGCGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSPSLAN*LVSGHP
Trigger: AGGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGG...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGAGGACGGGAACCATGTaGGAGAAGTTAAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKRTGTM*EKLNVA
Trigger: TGCAACATTTAACTTCTCGCACATGGTTCCCGTCCT...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGGAGAACCAACAAATATaGACACACGGAGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVENQQI*THGGRF
Trigger: GAAACGCCCTCCGTGTGTGCATATTTGTTGGTTCTC...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGGTCAGGTTGGGTCTTaGGGGGTCCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTGQVGS*GVQQEE
Trigger: CTCTTCCTGCTGGACCCCCCAAGACCCAACCTGACC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTCACTGCCATCTGGGTaGGAGGTCAGGTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCSLPSG*EVRLGL
Trigger: AAGACCCAACCTGACCTCCCACCCAGATGGCAGTGA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWISEESS*SQSHQG
Trigger: GCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTCAGAGGAGAGTTCTTaGTCTCAGTCACATCAGGGC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGSEESS*SQSHQG
Trigger: GCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDISIIS*ENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGAT...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAGGCTTCTCCGAAATTaGAGTTCCAGAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VVSYAVNTLINAAFLMESRLLRN*SSRSHP
Trigger: AGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGCCAACGGCTTCTTTCTaGCATGAGTTCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWPTASF*HEFAHA
Trigger: AGCATGAGCGAACTCATGCCAGAAAGAAGCCGTTGG...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTAGGTGCTGGTTGAGATaGGCACTGAGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGRCWLR*ALRTKA
Trigger: AGCTTTTGTCCTCAGTGCCCATCTCAACCAGCACCT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCGGCTGAGGCTCGAGTaGCACCGAAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRLRLE*HRKAFW
Trigger: CCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGNGLIF*DSAATQ
Trigger: TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAAGTATGTCTTCCATATaGGTTGTTTCATATGCGGTT +
Preference number: 4 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATSMSSI*VVSYAV
Trigger: AACCGCATATGAAACAACCCATATGGAAGACATACT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCGGTGGACACAGGACTaGGTCCTCTCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGRWTQD*VLSLIH
Trigger: ATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCCAGGCTGTGTGTCATaGCTGGGTGGGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNPGCVS*LGGWSL
Trigger: TAGTGACCACCCACCCAGTCATGACACACAGCCTGG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGTGGCACTTCAGGGTTaGGCCGCAAATGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSVALQG*AANEAF
Trigger: GAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCAC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATTCTGTTCTGGGTTCTaGTCCAAGATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIFCSGF*SKIFPL
Trigger: GAGTGGGAAGATCTTGGATCAGAACCCAGAACAGAA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCCTGAGAGATTTTTCTaGCCTTCCCAAGGTCACTTA +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVPERFF*PSQGHL
Trigger: TAAGTGACCTTGGGAAGGTCAGAAAAATCTCTCAGG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCCACACACCACAGGTTTaGCCCCTAAGTATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSHTPQV*PLSMSS
Trigger: GGAAGACATACTTAGGGGTCAAACCTGTGGTGTGTG...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCTCAGAGGTAGTTTTTaGAGCGTGAGTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELLRGSF*SVSFLM
Trigger: CATCAGAAAACTCACGCTGCAAAAACTACCTCTGAG...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGATTGTGTCACAGCCCTaGAACACTTTGTACACTCTT +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKIVSQP*NTLYTL
Trigger: AAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAAT...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTCCCACACCCAATGGCTaGCAGTTTTCCATAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCPTPNG*QFSIES
Trigger: GGACTCTATGGAAAACTGGCAGCCATTGGGTGTGGG...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGAGAACCAACAAATATaGACACACGGAGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWENQQI*THGGRF
Trigger: GAAACGCCCTCCGTGTGTGCATATTTGTTGGTTCTC...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRACCF*ASSCQR
Trigger: CCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTRACCF*ASSCQR
Trigger: CCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEISIIS*ENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGAT...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGTTCCTTAGACTTAGCTaGTGTGAGGGTCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKFLRLS*CEGLFR
Trigger: TCTGAAAAGACCCTCACACCAGCTAAGTCTAAGGAA...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTGTGTCATGACTGGGTaGGTGGTCACTATCTTGACT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWCVMTG*VVTILT
Trigger: AGTCAAGATAGTGACCACCCACCCAGTCATGACACA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATTTCTGCGGTGTGAATaGCCTGATGTCGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIFLRCE*PDVASD
Trigger: ATCTGATGCGACATCAGGCCATTCACACCGCAGAAA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTTTCTGCGGTGTGAATaGCCTGATGTCGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWFLRCE*PDVASD
Trigger: ATCTGATGCGACATCAGGCCATTCACACCGCAGAAA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGATCCTTGTTTTTCTCTaGCGTGAACACTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWILVFL*REHSRG
Trigger: GCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGAT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGACTCCCATGAAAAATTaGGTGTCTTATTGCATAACC +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAETPMKN*VSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGAGTATGTCTTCCATATaGGTTGTTTCATATGCGGTT +
Preference number: 4 (lower is better)
Translates to: NLTSRTPGARVEKPKGAESMSSI*VVSYAV
Trigger: AACCGCATATGAAACAACCCATATGGAAGACATACT...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTATGATGACATCCCAGTaGTCACTTCCACACACCACA +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGMMTSQ*SLPHTT
Trigger: TGTGGTGTGTGGAAGTGACCACTGGGATGTCATCAT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCCTTTGTACACTCTTTTaGTATACAACATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: NWLCGSISLDSPTILGDPLCTLF*YTTCPS
Trigger: AGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCTTTGTACACTCTTTTaGTATACAACATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: GNWLCGSISLDSPTILGDLCTLF*YTTCPS
Trigger: AGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTGCCCCCACACCCAATaGCTGCCAGTTTTCCATAGA +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCCPHTQ*LPVFHR
Trigger: TCTATGGAAAACTGGCAGCCATTGGGTGTGGGGGCA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCAGGGCGTTTCTACCTTaGCCTGCAGCAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSRAFLP*PAATQV
Trigger: CACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCT...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACTCGCCTTCAGGAACAGATaGATCCAGGTGTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SGTDGSRCLRDMSVIWSLAFRNR*IQVFKR
Trigger: TCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC...GAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGACAAGTCCCAATGTaGGTCTCCCTCGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGQVPM*VSLGIV
Trigger: TACAATCCCGAGGGAGACTCACATTGGGACTTGTCC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGTGTTTTCTCAAGTTaGAGGTCGCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGVFSS*RSPGTW
Trigger: CCAAGTGCCAGGCGACCTTCAACTTGAGAAAACACC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGATCTTCCCACACTCCTaGCACTCAGAGGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWIFPHS*HSEVVF
Trigger: AAAAACTACCTCTGAGTGTCAGGAGTGTGGGAAGAT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAATGTCGCATCAGATGTaGGGGCCGGCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTMSHQM*GPAETP
Trigger: AGGAGTTTCAGCCGGCCCTCACATCTGATGCGACAT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATTCTTTGATGGTGAATaGGCCGAGTACTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIFFDGE*AEYFGQ
Trigger: TTGGCCAAAGTACTCGGCTCATTCACCATCAAAGAA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGGTGTGCACTGTGGCTaGAGGTCTTTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTGVHCG*RSFRIR
Trigger: ACGAATGCGGAAAGACCTTCAGCCACAGTGCACACC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGATGCTTAGAAAGGCATaGGCTCTGACGGAACGTTTT +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWMLRKA*ALTERF
Trigger: AAAACGTTCCGTCAGAGCTCATGCCTTTCTAAGCAT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATACCTGAGAGATTTTTCTaGCCTTCCCAAGGTCACTTA +
Preference number: 4 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIPERFF*PSQGHL
Trigger: TAAGTGACCTTGGGAAGGTCAGAAAAATCTCTCAGG...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCAAGGTTGTAGCTAGTTaGGGTGAAGAGTTTACATGT +
Preference number: 4 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELKVVAS*GEEFTC
Trigger: ACATGTAAACTCTTCACCTCAACTAGCTACAACCTT...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGAAATGGGTTCATTTCTaGTTCCAGAAGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVKWVHF*FQKLQS
Trigger: GCTCTGAAGCTTCTGGAATCAGAAATGAACCCATTT...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCCATGCCGACATCCTTaGGGGTCACAAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNPCRHP*GSQIPR
Trigger: CCGAGGAATTTGTGACCCTCAAGGATGTCGGCATGG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445728.7
CDS-3UTR GCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTCTGGGCTTCCTCCTaGCAGAGGCTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNFWASS*QRLQIF
Trigger: GAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAA...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTTTTTCAGAAACATTATaGACCATGGAATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAFSETL*TMESSP
Trigger: GGGAGAAGATTCCATGGTGCATAATGTTTCTGAAAA...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTTTCAGAAACATTATaGACCATGGAATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQFSETL*TMESSP
Trigger: GGGAGAAGATTCCATGGTGCATAATGTTTCTGAAAA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAATCTTCACTGCCATCTaGGTGGGAGGTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTIFTAI*VGGQVG
Trigger: CCCAACCTGACCTCCCACCCAGATGGCAGTGAAGAT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCWDFPR*WQYQTS
Trigger: TGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCATCCTTGTTTTTCTCTaGCGTGAACACTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSILVFL*REHSRG
Trigger: GCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGAT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGAGAGAAACTTGCAATaGGATAGTTTCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNERNLQ*DSFQLS
Trigger: TGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTC...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAACTCCCATGAAAAATTaGGTGTCTTATTGCATAACC +
Preference number: 4 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQTPMKN*VSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGT...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACAGGGCGTTTCTACCTTaGCCTGCAGCAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRAFLP*PAATQV
Trigger: CACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACGGACAAGTCCCAATGTaGGTCTCCCTCGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNGQVPM*VSLGIV
Trigger: TACAATCCCGAGGGAGACTCACATTGGGACTTGTCC...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270617.8
ENST00000595661.5
CDS-3UTR TCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACGGTGTTTTCTCAAGTTaGAGGTCGCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNGVFSS*RSPGTW
Trigger: CCAAGTGCCAGGCGACCTTCAACTTGAGAAAACACC...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCATCTTCCCACACTCCTaGCACTCAGAGGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSIFPHS*HSEVVF
Trigger: AAAAACTACCTCTGAGTGTCAGGAGTGTGGGAAGAT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGAAGGTTGTAGCTAGTTaGGGTGAAGAGTTTACATGT +
Preference number: 4 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVKVVAS*GEEFTC
Trigger: ACATGTAAACTCTTCACCTCAACTAGCTACAACCTT...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGAGTCCTCTTTAAGTaGGAAGCTTGGGAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGVLFK*EAWEVR
Trigger: CCTAACCTCCCAAGCTTCTCACTTAAAGAGGACTCC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCAGGTGCAAGAGTTaGAAAGCCCAAGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTSRCKS*KAQGCR
Trigger: TCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGA...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCATTTTCAGAAACATTATaGACCATGGAATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPFSETL*TMESSP
Trigger: GGGAGAAGATTCCATGGTGCATAATGTTTCTGAAAA...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp GCCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCGTAATTGAACAGTTTTaGCTTCAGGAACAGATGGAT +
Preference number: 4 (lower is better)
Translates to: AFRNRWIQVFKRHVSNLVVIEQF*LQEQMD
Trigger: ATCCATCTGTTCCTGAAGGCAAAACTGTTCAATTAC...GACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CCA 90 bp TCTATAATCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: SIISWENPSSKKSSIRGEISIIS*ENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGAT...CTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTAGGCTTCTCCGAAATTaGAGTTCCAGAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCRLLRN*SSRSHP
Trigger: AGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATGGAATCTTCTCCCGTaGAAACGGTGGACACAGGAC +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTWNLLP*KRWTQD
Trigger: GTCCTGTGTCCACCGTTTCCACGGGAGAAGATTCCA...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTTCCTTAGACTTAGCTaGTGTGAGGGTCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWFLRLS*CEGLFR
Trigger: TCTGAAAAGACCCTCACACCAGCTAAGTCTAAGGAA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGCTGTGTGTCATGACTaGGTGGGTGGTCACTATCTT +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSAVCHD*VGGHYL
Trigger: AAGATAGTGACCACCCACCCAGTCATGACACACAGC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCATGAGCCGAGTACTTTaGCCAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSMSRVL*PKAFPH
Trigger: GTGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCAT...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGAGAGAAACTTGCAATaGGATAGTTTCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPERNLQ*DSFQLS
Trigger: TGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCACTTAGGTAGTAGATaGCAGAGGTGGGATTTAACT +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGHLGSR*QRWDLT
Trigger: AGTTAAATCCCACCTCTGCCATCTACTACCTAAGTG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACTCCCATGAAAAATTaGGTGTCTTATTGCATAACC +
Preference number: 4 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKTPMKN*VSYCIT
Trigger: GGTTATGCAATAAGACACCCAATTTTTCATGGGAGT...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
3UTR CAA 72 bp ATCAATGCAGCTTTCCTGATGGAATCCAGCTGTGTTTaGGTGTCAACTCCCATGAAAAATTGGGTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: INAAFLMESSCV*VSTPMKNWVSY
Trigger: ATAAGACACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAAAGCTGCATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGTAGTTTCTCTGGGTaGAGACTCTGTCACACTTAC +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGSFSG*RLCHTY
Trigger: GTAAGTGTGACAGAGTCTTCACCCAGAGAAACTACC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAACAAACACCCAGAGCTaGCAAGACACTGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTTNTQS*QDTGRE
Trigger: TTCCCTACCAGTGTCTTGTCAGCTCTGGGTGTTTGT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGTGTGGATCTTCTGGTaGCGAGTAAGGTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTVWIFW*RVRWKI
Trigger: GATCTTCCACCTTACTCGGCACCAGAAGATCCACAC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTTTTGGTATACAACATaGCCATCTCCCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCFWYTT*PSPRQD
Trigger: GTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTCAGCCATGGCCAACTaGGGTTCAGTAGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNSAMAN*GSVASF
Trigger: AAAAGAGGCTACTGAACCCCAGTTGGCCATGGCTGA...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNWDFPR*WQYQTS
Trigger: TGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCA...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGAAACATTATGCACCATaGAATCTTCTCCCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWKHYAP*NLLPWK
Trigger: TTTCCACGGGAGAAGATTCCATGGTGCATAATGTTT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTAAACATTATGCACCATaGAATCTTCTCCCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGKHYAP*NLLPWK
Trigger: TTTCCACGGGAGAAGATTCCATGGTGCATAATGTTT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCATCCTTGTTTTTCTCTaGCGTGAACACTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSILVFL*REHSRG
Trigger: GCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGAT...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCCAACGGCTTCTTTCTaGCATGAGTTCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNPTASF*HEFAHA
Trigger: AGCATGAGCGAACTCATGCCAGAAAGAAGCCGTTGG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACCAACGGCTTCTTTCTaGCATGAGTTCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTPTASF*HEFAHA
Trigger: AGCATGAGCGAACTCATGCCAGAAAGAAGCCGTTGG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCGGTGGACACAGGACTaGGTCCTCTCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRWTQD*VLSLIH
Trigger: ATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR TCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCCCTGAGAGATTTTTCTaGCCTTCCCAAGGTCACTTA +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSPERFF*PSQGHL
Trigger: TAAGTGACCTTGGGAAGGTCAGAAAAATCTCTCAGG...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR TCA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTATTTGTGCTATAGCTaGTGTGTATTTGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGYLCYS*CVFVAY
Trigger: GTAAGCCACAAATACACATCAGCTATAGCACAAATA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTTTTCAGAAACATTATaGACCATGGAATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWFSETL*TMESSP
Trigger: GGGAGAAGATTCCATGGTGCATAATGTTTCTGAAAA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACTGATGGCTTTCCCTTaGTCACCCCATTTATACAGC +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTLMAFP*SPHLYS
Trigger: GCTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR GCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTATTGTGTCACAGCCCTaGAACACTTTGTACACTCTT +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCIVSQP*NTLYTL
Trigger: AAGAGTGTACAAAGTGTTGCAGGGCTGTGACACAAT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACAGGCTTCTCCGAAATTaGAGTTCCAGAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRLLRN*SSRSHP
Trigger: AGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTDFPRW*QYQTSE
Trigger: TTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACATCCTTGTTTTTCTCTaGCGTGAACACTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNILVFL*REHSRG
Trigger: GCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGAT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGCTGATGTGTATTTGTaGCTTACACTTGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTADVYL*LTLGEP
Trigger: GGGCTCACCAAGTGTAAGCCACAAATACACATCAGC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGGGAGCATGTGTTTGTaGGATAGGGAGTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTGSMCL*DRESSL
Trigger: TAAAGAGGACTCCCTATCCCACAAACACATGCTCCC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCACCAACACTGTTAAATaGAGGAAGGTCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CQLTAIVDENGFISDSRSTNTVK*RKVIGR
Trigger: TCTTCCTATGACCTTCCTCCATTTAACAGTGTTGGT...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAAGGACGGGAACCATGTaGGAGAAGTTAAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTRTGTM*EKLNVA
Trigger: TGCAACATTTAACTTCTCGCACATGGTTCCCGTCCT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR GCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACTCAGAGGTAGTTTTTaGAGCGTGAGTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTLRGSF*SVSFLM
Trigger: CATCAGAAAACTCACGCTGCAAAAACTACCTCTGAG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAAGTAGATGGCAGAGGTaGGATTTAACTCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTSRWQR*DLTQGR
Trigger: TCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTAGTATGTCTTCCATATaGGTTGTTTCATATGCGGTT +
Preference number: 4 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCSMSSI*VVSYAV
Trigger: AACCGCATATGAAACAACCCATATGGAAGACATACT...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CCA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNISIIS*ENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGAT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CCA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGAGAAACTTGCAATaGGATAGTTTCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSERNLQ*DSFQLS
Trigger: TGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 90 bp ACACGCGCCTCCTCGCAGCGACTTCCTGTGCGCGAGAAGCTTCTCTaGGCGGCTGCACCCAGGATCCTCCGCGGCAGCGCCAGGACTCTA +
Preference number: 5 (lower is better)
Translates to: TRASSQRLPVREKLL*AAAPRILRGSARTL
Trigger: TAGAGTCCTGGCGCTGCCGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCGAGGAGGCGCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 90 bp GAGATTCAACTCCCCGCACACGCGCCTCCTCGCAGCGACTTCCTGTaGGCGAGAAGCTTCTCTGAGCGGCTGCACCCAGGATCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: EIQLPAHAPPRSDFL*ARSFSERLHPGSSA
Trigger: CGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCGAGGAGGCGCGTGTGCGGGGAGTTGAATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 90 bp CTCCTCGCAGCGACTTCCTGTGCGCGAGAAGCTTCTCTGAGCGGCTaGACCCAGGATCCTCCGCGGCAGCGCCAGGACTCTATTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LLAATSCAREASLSG*TQDPPRQRQDSISQ
Trigger: CTGGGAAATAGAGTCCTGGCGCTGCCGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 90 bp GGCTCCTGTGTGTGGACGAGGTGCTGCACTGGGCGACTCTGGGGATaGCTGTCCTGTAGGGTTCCCAGTCCAGTGATGGAGAGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSCVWTRCCTGRLWG*LSCRVPSPVMEREP
Trigger: TGGCTCCCTCTCCATCACTGGACTGGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp GCACGTGGCTCCTGTGTGTGGACGAGGTGCTGCACTGGGCGACTCTaGGGATGCCTGTCCTGTAGGGTTCCCAGTCCAGTGATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ARGSCVWTRCCTGRL*GCLSCRVPSPVMER
Trigger: CCTCTCCATCACTGGACTGGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 90 bp GCTGGAGTCTGGGCCCTGCTGCTGTCTCACTGTGTGACACTGGTGTaGAGAAGAGGGCGACACAGCAGGCTGGCTGCTCTCCTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: AGVWALLLSHCVTLV*RRGRHSRLAALLGK
Trigger: TTTTCCCAGGAGAGCAGCCAGCCTGCTGTGTCGCCCTCTTCTGCACACCAGTGTCACACAGTGAGACAGCAGCAGGGCCCAGACTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS GCA 90 bp GAAGGTACACAAGGGGCCCCTCTCCATCCACTCACCAGGGCTTGTTaGTTCTGGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: EGTQGAPLHPLTRAC*FWASSCQRLQIFTA
Trigger: GGCAGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTGAGTGGATGGAGAGGGGCCCCTTGTGTACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp ACACAAGGGGCCCCTCTCCATCCACTCACCAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACTGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: TQGAPLHPLTRACCF*ASSCQRLQIFTAIW
Trigger: CCAGATGGCAGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTGAGTGGATGGAGAGGGGCCCCTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp CACGAGCCTGAGCGTGGTGAGCCAAGAAGGGAGCTGCAGACTGACTaGATGGGGTACAGCCTGAGATTCCTGTGGTCTCTGGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: HEPERGEPRRELQTD*MGYSLRFLWSLVQG
Trigger: GCCCTGAACCAGAGACCACAGGAATCTCAGGCTGTACCCCATCCAGTCAGTCTGCAGCTCCCTTCTTGGCTCACCACGCTCAGGCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 90 bp TCTATGCTTTATCCTGCACGTGGCTCCTGTGTGTGGACGAGGTGCTaGACTGGGCGACTCTGGGGATGCCTGTCCTGTAGGGTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SMLYPARGSCVWTRC*TGRLWGCLSCRVPS
Trigger: ACTGGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATAAAGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS TCA 90 bp GTGAGAAAGCCTCCCTTCCACCCATGGCTGACTCGCTGTCCATGCTaGCGAGCCCCCAAAATGTCCAGGAGGAGGAGGACAAGTCCCAAT +
Preference number: 5 (lower is better)
Translates to: VRKPPFHPWLTRCPC*RAPKMSRRRRTSPN
Trigger: ATTGGGACTTGTCCTCCTCCTCCTGGACATTTTGGGGGCTCGTCAGCATGGACAGCGAGTCAGCCATGGGTGGAAGGGAGGCTTTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000595661.5
ENST00000599155.1
CDS TCA 90 bp CCCCAGCTCCCAGGACAAGGGGATGGAAGCCAGCGAGAAGCAGAGTaGAGTCCTGAAGCTGAGCGTTGTAATGTCTCGGTAGACCTGTGG +
Preference number: 5 (lower is better)
Translates to: PQLPGQGDGSQREAE*SPEAERCNVSVDLW
Trigger: CCACAGGTCTACCGAGACATTACAACGCTCAGCTTCAGGACTTCACTCTGCTTCTCGCTGGCTTCCATCCCCTTGTCCTGGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS TCA 90 bp GTGAGCCAAGAAGGGAGCTGCAGACTGACTGGATGGGGTACAGCCTaGGATTCCTGTGGTCTCTGGTTCAGGGCCCTGCTTCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: VSQEGSCRLTGWGTA*DSCGLWFRALLLML
Trigger: CAGCATGAGAAGCAGGGCCCTGAACCAGAGACCACAGGAATCTCAGGCTGTACCCCATCCAGTCAGTCTGCAGCTCCCTTCTTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 90 bp TTTTCTATGCTTTATCCTGCACGTGGCTCCTGTGTGTGGACGAGGTaGTGCACTGGGCGACTCTGGGGATGCCTGTCCTGTAGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: FSMLYPARGSCVWTR*CTGRLWGCLSCRVP
Trigger: GGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATAAAGCATAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATCCCGAGCCTAGCAAATaGCCTGGTGAGCGGCCATCC +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHPEPSK*PGERPS
Trigger: GGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGGG...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTCCCGAGCCTAGCAAATaGCCTGGTGAGCGGCCATCC +
Preference number: 5 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFPEPSK*PGERPS
Trigger: GGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGGG...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 90 bp CCACCCAATGGCTACAGGCAGTATTGCTGCTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAGTGGCACCGAAAGGCTTTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: PPNGYRQYCCLLCTR*WRLRLEWHRKAFWQ
Trigger: TTGCCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCCATTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 90 bp TCTCCTGACTTTTCTATGCTTTATCCTGCACGTGGCTCCTGTGTGTaGACGAGGTGCTGCACTGGGCGACTCTGGGGATGCCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: SPDFSMLYPARGSCV*TRCCTGRLWGCLSC
Trigger: ACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATAAAGCATAGAAAAGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS-3UTR CAA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCACTCTCAGGTGCTGGTaGAGATGGGCACTGAGGACA +
Preference number: 5 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGTLRCW*RWALRT
Trigger: TGTCCTCAGTGCCCATCTCAACCAGCACCTGAGAGT...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 90 bp GCTACAGGCAGTATTGCTGCTTGTTGTGTACACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAAAGGCTTTCTGGCAACGTTGACACT +
Preference number: 5 (lower is better)
Translates to: ATGSIAACCVHADGG*GSSGTERLSGNVDT
Trigger: AGTGTCAACGTTGCCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCATTTGTGGCTTACACTaGGTGAGCCCTCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCICGLH*VSPHVL
Trigger: CAGCACATGAGGGCTCACCAAGTGTAAGCCACAAAT...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 90 bp GTGATCAAAGCTGTGACAGCTGGGGCTGGGGATACAAAGGACTTGTaGCAGCTCTTTAATGGGCAGGATCTGCCAGGTGGAGAGGCACGT +
Preference number: 5 (lower is better)
Translates to: VIKAVTAGAGDTKDL*QLFNGQDLPGGEAR
Trigger: ACGTGCCTCTCCACCTGGCAGATCCTGCCCATTAAAGAGCTGTCACAAGTCCTTTGTATCCCCAGCCCCAGCTGTCACAGCTTTGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp CCTGAAGCTGAGCGTTGTAATGTCTCGGTAGACCTGTGGGAAAGCTaGCTGCAGCCTCAGGATGGAGGTCTGGAAGACAGAAGGTACACA +
Preference number: 5 (lower is better)
Translates to: PEAERCNVSVDLWES*LQPQDGGLEDRRYT
Trigger: TGTGTACCTTCTGTCTTCCAGACCTCCATCCTGAGGCTGCAGCCAGCTTTCCCACAGGTCTACCGAGACATTACAACGCTCAGCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp CCAGGCTTATCTCCTATCACCTTAGAAACCAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACTGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: PGLSPITLETRACCF*ASSCQRLQIFTAIW
Trigger: CCAGATGGCAGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCTAAGGTGATAGGAGATAAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CAA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCCCACACACCACAGGTTaGACCCCTAAGTATGTCTTC +
Preference number: 5 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGPHTTG*TPKYVF
Trigger: GAAGACATACTTAGGGGTCAAACCTGTGGTGTGTGG...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS GCA 90 bp TCCTTAGCCATTCATGATTTATTCACTGACCCATGGGCCACACATTaGCTGAGGCCTCCATGGGCCAGGGACAGAAAATGTCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SLAIHDLFTDPWATH*LRPPWARDRKCQGP
Trigger: GGGACCCTGACATTTTCTGTCCCTGGCCCATGGAGGCCTCAGGCAATGTGTGGCCCATGGGTCAGTGAATAAATCATGAATGGCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 90 bp GCAGCATTCAGGCCTGGGCTTAAGTTACTCCCTGATGTGGCCATCTaGTATGCCCCAGGGATAGGAAGGAAAAATGGGCCTGAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: AAFRPGLKLLPDVAI*YAPGIGRKNGPEGK
Trigger: CTTTCCTTCAGGCCCATTTTTCCTTCCTATCCCTGGGGCATAGCAGATGGCCACATCAGGGAGTAACTTAAGCCCAGGCCTGAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp CATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTGCTTGTTGTGTACACGCTGATGGCG +
Preference number: 5 (lower is better)
Translates to: HPSNGLIFWDSAATQ*LQAVLLLVVYTLMA
Trigger: CGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAGTGGGACTTTCCCCGTaGGTGGCAATATCAGACCTC +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIVGLSP*VAISDL
Trigger: GAGGTCTGATATTGCCACCAACGGGGAAAGTCCCAC...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGTGGGACTTTCCCCGTaGGTGGCAATATCAGACCTC +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPVGLSP*VAISDL
Trigger: GAGGTCTGATATTGCCACCAACGGGGAAAGTCCCAC...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCGGTGCTGTGTTAGATTaGCTTTCTGGGCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGGAVLD*LSGQRL
Trigger: AAGCCTTTGCCCAGAAAGCAAATCTAACACAGCACC...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAACTCTCAGGTGCTGGTaGAGATGGGCACTGAGGACA +
Preference number: 5 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATTLRCW*RWALRT
Trigger: TGTCCTCAGTGCCCATCTCAACCAGCACCTGAGAGT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCACTCTCAGGTGCTGGTaGAGATGGGCACTGAGGACA +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPTLRCW*RWALRT
Trigger: TGTCCTCAGTGCCCATCTCAACCAGCACCTGAGAGT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGTGCGAATCCAGCTGTGTTTaGGTGTCAACTCCCATGAAA +
Preference number: 5 (lower is better)
Translates to: QHAHLPDKTELQRTGTMCESSCV*VSTPMK
Trigger: TTTCATGGGAGTTGACACCAAAACACAGCTGGATTC...GCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCAGAGCAAGCGGTAGGTaGCCATGGAAACGCGTTGTG +
Preference number: 5 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTRASGR*PWKRVV
Trigger: CACAACGCGTTTCCATGGCAACCTACCGCTTGCTCT...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595661.5
CDS TCA 90 bp GATACAGGCCACAGCGGAGAAAACGCCACTGCTGTCTTTGAAGACTaGGAAGCCATGAGTCAAGCAATACAGGTGACCTCCAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: DTGHSGENATAVFED*EAMSQAIQVTSRSW
Trigger: CCAGCTTCTGGAGGTCACCTGTATTGCTTGACTCATGGCTTCTCAGTCTTCAAAGACAGCAGTGGCGTTTTCTCCGCTGTGGCCTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS TCA 90 bp TCAACACACTCAGGGAGCACAAGGCAGGAAAGTAGAGAGACCAACTaGGAGAGTGGAGGGCGTACCCTTGTTGAGTCTGGAAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: STHSGSTRQESRETN*ESGGRTLVESGRKE
Trigger: CTCTTTCCTTCCAGACTCAACAAGGGTACGCCCTCCACTCTCTCAGTTGGTCTCTCTACTTTCCTGCCTTGTGCTCCCTGAGTGTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 90 bp GAGGCACGTACTTCCTTAGCCATTCATGATTTATTCACTGACCCATaGGCCACACATTGCCTGAGGCCTCCATGGGCCAGGGACAGAAAA +
Preference number: 5 (lower is better)
Translates to: EARTSLAIHDLFTDP*ATHCLRPPWARDRK
Trigger: TTTTCTGTCCCTGGCCCATGGAGGCCTCAGGCAATGTGTGGCCCATGGGTCAGTGAATAAATCATGAATGGCTAAGGAAGTACGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTCCATGCCGACATCCTaGAGGGTCACAAATTCCTCA +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHSMPTS*RVTNSS
Trigger: TGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATACCTTGCTCACACTCTaGATGGACAGTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHTLLTL*MDSGFL
Trigger: GAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATAATGAGCCGAGTACTTaGGCCAAAGGCTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHNEPST*AKGFPT
Trigger: TGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCATT...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGCTGATGGCTTTCCCTaGCTCACCCCATTTATACAG +
Preference number: 5 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFADGFP*LTPFIQ
Trigger: CTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAGC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTGGCTACAGGCAGTATaGCTGCTTGTTGTGTACACG +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHWLQAV*LLVVYT
Trigger: CGTGTACACAACAAGCAGCAATACTGCCTGTAGCCA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCCTCCAGGTGCAAGAGTaGAAAAGCCCAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NWLCGSISLDSPTILGDPLQVQE*KSPRVQ
Trigger: CTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAG...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 90 bp CCCGTGGAAACGGTGGACACAGGACTGAGTCCTCTCTTTAATTCATaGCTCTTGCATTCCGTGGGACTTTCCCCGTTGGTGGCAATATCA +
Preference number: 5 (lower is better)
Translates to: PVETVDTGLSPLFNS*LLHSVGLSPLVAIS
Trigger: TGATATTGCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCGTTTCCACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTIRGEF*VSVTSG
Trigger: CCCTGATGTGACTGAGACCAAGAACTCTCCTCTGAT...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTAACCAGCAGAACTCCAGGTGCAAGAGTTGAAAAGCCCAAGGGTGCAGAGCAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: NLTSRTPGARVEKPKGAEQASPK*EFQKPS
Trigger: GGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTG...CTCTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAGTTCTGCTGGTTAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGGTGGGACTTTCCCCGTaGGTGGCAATATCAGACCTC +
Preference number: 5 (lower is better)
Translates to: VIGRGSMCLWDRESSLSEVGLSP*VAISDL
Trigger: GAGGTCTGATATTGCCACCAACGGGGAAAGTCCCAC...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAAATGAGCCGAGTACTTaGGCCAAAGGCTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSINEPST*AKGFPT
Trigger: TGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCATT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGAGCCGAGTACTTaGGCCAAAGGCTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPNEPST*AKGFPT
Trigger: TGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCATT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAGCTGATGGCTTTCCCTaGCTCACCCCATTTATACAG +
Preference number: 5 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATADGFP*LTPFIQ
Trigger: CTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAGC...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GCAACACAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTGGCTTTCTGGCAACGTaGACACTGATAAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: ATQVTDLQTAPTPNGCQFGFLAT*TLIKCL
Trigger: GAGACACTTTATCAGTGTCAACGTTGCCAGAAAGCC...AAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTGTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp ATAGTGTATGGATACTACCCGCCCCCGAGCCTAGCAAATTGCCTGGTGAGCGGCATAGCTGATGTGTATTaGTGGCTTACACTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: IVYGYYPPPSLANCLVSGIADVY*WLTLGE
Trigger: CTCACCAAGTGTAAGCCACAAATACACATCAGCTAT...GCCGCTCACCAGGCAATTTGCTAGGCTCGGGGGCGGGTAGTATCCATACACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGAGGGCGTTTCTACCTaGGCCTGCAGCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPEGVST*ACSNTG
Trigger: ACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATIRGEF*VSVTSG
Trigger: CCCTGATGTGACTGAGACCAAGAACTCTCCTCTGAT...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAACAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQQASPK*EFQKPS
Trigger: GGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTG...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAGGCTTTCTGGCAACGTaGACACTGATAAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIGFLAT*TLIKCL
Trigger: GAGACACTTTATCAGTGTCAACGTTGCCAGAAAGCC...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCTGGCTACAGGCAGTATaGCTGCTTGTTGTGTACACG +
Preference number: 5 (lower is better)
Translates to: NWLCGSISLDSPTILGDPWLQAV*LLVVYT
Trigger: CGTGTACACAACAAGCAGCAATACTGCCTGTAGCCA...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATGAATCCAGCTGTGTTTaGGTGTCAACTCCCATGAAA +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHESSCV*VSTPMK
Trigger: TTTCATGGGAGTTGACACCAAAACACAGCTGGATTC...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAACTCTCCAACAATCCTaGGTGATCCCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSITLQQS*VIPELP
Trigger: AGGAAGTTCTGGGATCACCAAGGATTGTTGGAGAGT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATTCCATAGAGTCCCTATaGTGTCACAGCCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: GNWLCGSISLDSPTILGDSIESL*CHSPAT
Trigger: TGTTGCAGGGCTGTGACACAATAGGGACTCTATGGA...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCCATGCCGACATCCTaGAGGGTCACAAATTCCTCG +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQSMPTS*RVTNSS
Trigger: CGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445728.7
CDS-3UTR CAA 90 bp TCTCCTGGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCCATGCCGACATCCTaGAGGGTCACAAATTCCTCG +
Preference number: 5 (lower is better)
Translates to: SPGRILLRRNPPSEESSWSMPTS*RVTNSS
Trigger: CGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...CCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS CCA 90 bp GGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAATGGCTACAGGCAGTATTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GIVSNFQHPSNGLIF*DSAATQWLQAVLLL
Trigger: AAGCAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAIRGEF*VSVTSG
Trigger: CCCTGATGTGACTGAGACCAAGAACTCTCCTCTGAT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGCAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKQASPK*EFQKPS
Trigger: GGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTG...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPQASPK*EFQKPS
Trigger: GGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTG...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATACCTTGCTCACACTCTaGATGGACAGTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNTLLTL*MDSGFL
Trigger: GAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGT...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCAGAATTCCGGTCAAAACCTaGCTCACACTCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: WLCGSISLDSPTILGDPRIPVKT*LTLLMD
Trigger: GTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAAT...TCTGGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCATTCCGGTCAAAACCTaGCTCACACTCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATIPVKT*LTLLMD
Trigger: GTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAAT...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGAACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATTGTTGCACAAGGCGATaGTTATCGCTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GNWLCGSISLDSPTILGDCCTRR*LSLKVS
Trigger: GGAGACTTTCAGCGATAACAATCGCCTTGTGCAACA...ATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTCTAGAGTGGATTCTTaGATGGTGAATGAGCCGAGT +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPSRVDS*MVNEPS
Trigger: ACTCGGCTCATTCACCATCAAAGAATCCACTCTAGA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGAATTAACTGATGTTTaGAGAGGTGTGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPELTDV*RGVHCG
Trigger: GCCACAGTGCACACCTCTCAAAACATCAGTTAATTC...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTGGTTGTGTGGTTCCATCTCACTGGACTCTCCAACAATCCTTGGTGATCCCGGTGCTGTGTTAGATTaGCTTTCTGGGCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: NWLCGSISLDSPTILGDPGAVLD*LSGQRL
Trigger: AAGCCTTTGCCCAGAAAGCAAATCTAACACAGCACC...GGGATCACCAAGGATTGTTGGAGAGTCCAGTGAGATGGAACCACACAACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTGAGGACAAAAGCTTaGCCACACACATTACAGGAG +
Preference number: 5 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATLRTKA*PHTLQE
Trigger: CTCCTGTAATGTGTGTGGCAAAGCTTTTGTCCTCAG...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATTGGCTACAGGCAGTATaGCTGCTTGTTGTGTACACG +
Preference number: 5 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNWLQAV*LLVVYT
Trigger: CGTGTACACAACAAGCAGCAATACTGCCTGTAGCCA...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELLVGNW*CGSISL
Trigger: CAGTGAGATGGAACCACACAACCAGTTCCCTACCAG...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGCTCCAGGTGCAAGAGTaGAAAAGCCCAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVLQVQE*KSPRVQ
Trigger: CTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAG...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTTCCATAGAGTCCCTATaGTGTCACAGCCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLASIESL*CHSPAT
Trigger: TGTTGCAGGGCTGTGACACAATAGGGACTCTATGGA...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGAGGGCGTTTCTACCTaGGCCTGCAGCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWEGVST*ACSNTG
Trigger: ACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTC...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 90 bp TATGCACCATGGAATCTTCTCCCGTGGAAACGGTGGACACAGGACTaGGTCCTCTCTTTAATTCATGACTCTTGCATTCCGTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: YAPWNLLPWKRWTQD*VLSLIHDSCIPWDF
Trigger: AAAGTCCCACGGAATGCAAGAGTCATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCGTTTCCACGGGAGAAGATTCCATGGTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 90 bp CTCTCTTTAATTCATGACTCTTGCATTCCGTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCAGAAGACTTTCTGGATCGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: LSLIHDSCIPWDFPR*WQYQTSEDFLDRLA
Trigger: TGCTAGGCGATCCAGAAAGTCTTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGAATTAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTCTTGGTCTCAGTCACATCAGATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: LLRRNPPSEESSWSQSHQIRGEF*VSVTSG
Trigger: CCCTGATGTGACTGAGACCAAGAACTCTCCTCTGAT...CTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS-3UTR CAA 90 bp ACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATATTCCGGTCAAAACCTaGCTCACACTCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: TFNIRVTVSYSGTLLPPNIPVKT*LTLLMD
Trigger: GTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAAT...ATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAAGGTGTTTTCTCAAGTaGAAGGTCGCCTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPRCFLK*KVAWHL
Trigger: CAAGTGCCAGGCGACCTTCAACTTGAGAAAACACCT...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTAGGTGTTTTCTCAAGTaGAAGGTCGCCTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRARCFLK*KVAWHL
Trigger: CAAGTGCCAGGCGACCTTCAACTTGAGAAAACACCT...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GTCATAGGAAGAGGGAGCATGTGTTTGTGGGATAGGGAGTCCTCTTTAAGTGAGTGTTGCACAAGGCGATaGTTATCGCTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: VIGRGSMCLWDRESSLSECCTRR*LSLKVS
Trigger: GGAGACTTTCAGCGATAACAATCGCCTTGTGCAACA...CTCACTTAAAGAGGACTCCCTATCCCACAAACACATGCTCCCTCTTCCTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATGTTGCACAAGGCGATaGTTATCGCTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQCCTRR*LSLKVS
Trigger: GGAGACTTTCAGCGATAACAATCGCCTTGTGCAACA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCTCTAGAGTGGATTCTTaGATGGTGAATGAGCCGAGT +
Preference number: 5 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATSRVDS*MVNEPS
Trigger: ACTCGGCTCATTCACCATCAAAGAATCCACTCTAGA...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTGGTGCTGTGTTAGATTaGCTTTCTGGGCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLAGAVLD*LSGQRL
Trigger: AAGCCTTTGCCCAGAAAGCAAATCTAACACAGCACC...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGGTGCTGTGTTAGATTaGCTTTCTGGGCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQGAVLD*LSGQRL
Trigger: AAGCCTTTGCCCAGAAAGCAAATCTAACACAGCACC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGACTCTCAGGTGCTGGTaGAGATGGGCACTGAGGACA +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWTLRCW*RWALRT
Trigger: TGTCCTCAGTGCCCATCTCAACCAGCACCTGAGAGT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAATTTGTGGCTTACACTaGGTGAGCCCTCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPICGLH*VSPHVL
Trigger: CAGCACATGAGGGCTCACCAAGTGTAAGCCACAAAT...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAATAGCTGATGTGTATTaGTGGCTTACACTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATIADVY*WLTLGE
Trigger: CTCACCAAGTGTAAGCCACAAATACACATCAGCTAT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAGAGGGAGCATGTGTTaGTGGGATAGGGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: VVSYAVNTLINAAFLMESRGSMC*WDRESS
Trigger: AGAGGACTCCCTATCCCACAAACACATGCTCCCTCT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCCCCGAGCCTAGCAAATaGCCTGGTGAGCGGCCATCC +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSPEPSK*PGERPS
Trigger: GGATGGCCGCTCACCAGGCAATTTGCTAGGCTCGGG...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CATGTCAGTAATCTGGTCACTCCTCTTAGCTCAGCTTCCTTTTTGGTTAGTTTCAGAAACCAGGGCTTGTaGCTTCTGGGCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: HVSNLVTPLSSASFLVSFRNQGL*LLGFLL
Trigger: CAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCT...GAAACTAACCAAAAAGGAAGCTGAGCTAAGAGGAGTGACCAGATTACTGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CAA 90 bp CCTTCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACTTAGAAACCAGGGCTaGTTGCTTCTGGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSGTDGSRCLRDMSVIWSLRNQG*LLLGFL
Trigger: GAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCTAAG...TGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS CCA 90 bp TCTTTAATTCATGACTCTTGCATTCCGTGGGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAAGACTTTCTGGATCGCCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SLIHDSCIPWDFPRW*QYQTSEDFLDRLAN
Trigger: GTTTGCTAGGCGATCCAGAAAGTCTTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGAATTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCTCCATGCCGACATCCTaGAGGGTCACAAATTCCTCA +
Preference number: 5 (lower is better)
Translates to: VVSYAVNTLINAAFLMESSMPTS*RVTNSS
Trigger: TGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCAGGAACAGATGGATCCAGGTGTTTAAGAGACATGTCAGTAATCTGGTCACTCTCCATGCCGACATCCTaGAGGGTCACAAATTCCTCA +
Preference number: 5 (lower is better)
Translates to: SGTDGSRCLRDMSVIWSLSMPTS*RVTNSS
Trigger: TGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...GAGTGACCAGATTACTGACATGTCTCTTAAACACCTGGATCCATCTGTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS-3UTR CAA 90 bp TGTCAACTAACAGCAATCGTCGATGAAAATGGGTTCATTTCTGATTCCAGAAGCTCACATCAGGGCTTGTaGCTTCTGGGCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: CQLTAIVDENGFISDSRSSHQGL*LLGFLL
Trigger: CAGGAGGAAGCCCAGAAGCAACAAGCCCTGATGTGA...GCTTCTGGAATCAGAAATGAACCCATTTTCATCGACGATTGCTGTTAGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCGTGAGTTTTCTGATGTaGGATGAGGTGTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPVSFLM*DEVFSQ
Trigger: TTGAGAAAACACCTCATCCAACATCAGAAAACTCAC...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTCCAGAGCCTACCGTGAGTTTTCTGATGTaGGATGAGGTGTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SRWQRWDLTQGRLAPEPTVSFLM*DEVFSQ
Trigger: TTGAGAAAACACCTCATCCAACATCAGAAAACTCAC...GGTAGGCTCTGGAGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATCTAGAGTGGATTCTTaGATGGTGAATGAGCCGAGT +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQSRVDS*MVNEPS
Trigger: ACTCGGCTCATTCACCATCAAAGAATCCACTCTAGA...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAGAATTAACTGATGTTTaGAGAGGTGTGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQELTDV*RGVHCG
Trigger: GCCACAGTGCACACCTCTCAAAACATCAGTTAATTC...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCTGAGGACAAAAGCTTaGCCACACACATTACAGGAG +
Preference number: 5 (lower is better)
Translates to: LCTLFWYTTCPSPRQDRALRTKA*PHTLQE
Trigger: CTCCTGTAATGTGTGTGGCAAAGCTTTTGTCCTCAG...AGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAGGCTTTCTGGCAACGTaGACACTGATAAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPGFLAT*TLIKCL
Trigger: GAGACACTTTATCAGTGTCAACGTTGCCAGAAAGCC...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAAGAGGGAGCATGTGTTaGTGGGATAGGGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIRGSMC*WDRESS
Trigger: AGAGGACTCCCTATCCCACAAACACATGCTCCCTCT...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGAGAGGGAGCATGTGTTaGTGGGATAGGGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWRGSMC*WDRESS
Trigger: AGAGGACTCCCTATCCCACAAACACATGCTCCCTCT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TATACAACATGCCCATCTCCCCGACAAGACAGAGCTCCAGAGGACGGGAACCATTTTTCAAGATGTCACTaGTCAACTAACAGCAATCGT +
Preference number: 5 (lower is better)
Translates to: YTTCPSPRQDRAPEDGNHFSRCH*STNSNR
Trigger: ACGATTGCTGTTAGTTGACAAGTGACATCTTGAAAA...ATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCAACTCTCCAACAATCCTaGGTGATCCCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: FPTFNIRVTVSYSGTLLPTLQQS*VIPELP
Trigger: AGGAAGTTCTGGGATCACCAAGGATTGTTGGAGAGT...TGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGLVGNW*CGSISL
Trigger: CAGTGAGATGGAACCACACAACCAGTTCCCTACCAG...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATAAAATGTTGCAACCATTaGAAAAACAGTGTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIKCCNH*KNSVRP
Trigger: GGGCCTTACACTGTTTTTCAAATGGTTGCAACATTT...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCTCCATAGAGTCCCTATaGTGTCACAGCCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: VVSYAVNTLINAAFLMESSIESL*CHSPAT
Trigger: TGTTGCAGGGCTGTGACACAATAGGGACTCTATGGA...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGTCCATGCCGACATCCTaGAGGGTCACAAATTCCTCA +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWSMPTS*RVTNSS
Trigger: TGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGA...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTATCAGAGGAGAGTTCTaGGTCTCAGTCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGIRGEF*VSVTSG
Trigger: CCCTGATGTGACTGAGACCAAGAACTCTCCTCTGAT...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGACCTTGCTCACACTCTaGATGGACAGTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWTLLTL*MDSGFL
Trigger: GAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCATTCCGGTCAAAACCTaGCTCACACTCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: VVSYAVNTLINAAFLMESIPVKT*LTLLMD
Trigger: GTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAAT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCGTGAGTTTTCTGATGTaGGATGAGGTGTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SNFQHPSNGLIFWDSAATVSFLM*DEVFSQ
Trigger: TTGAGAAAACACCTCATCCAACATCAGAAAACTCAC...GGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAAATGAGCCGAGTACTTaGGCCAAAGGCTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: GFISDSRSFRAVVHSVWINEPST*AKGFPT
Trigger: TGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCATT...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATAGCTGATGGCTTTCCCTaGCTCACCCCATTTATACAG +
Preference number: 5 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIADGFP*LTPFIQ
Trigger: CTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAGC...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAGGTGACTGATTTACAGACTGCCCCCACACCCAATGGCTGCCAGTTTTCCATATATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: QVTDLQTAPTPNGCQFSIYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...TATGGAAAACTGGCAGCCATTGGGTGTGGGGGCAGTCTGTAAATCAGTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCTATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAAATAGCTGATGTGTATTaGTGGCTTACACTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: NFQHPSNGLIFWDSAATQIADVY*WLTLGE
Trigger: CTCACCAAGTGTAAGCCACAAATACACATCAGCTAT...TTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp GAACCAACAAATATGCACACACGGAGGGCGTTTCTACCTTGGCCTGCAGCAACAAACTCCCATGAAAAATaGGGTGTCTTATTGCATAAC +
Preference number: 5 (lower is better)
Translates to: EPTNMHTRRAFLPWPAATNSHEK*GVLLHN
Trigger: GTTATGCAATAAGACACCCAATTTTTCATGGGAGTT...TGTTGCTGCAGGCCAAGGTAGAAACGCCCTCCGTGTGTGCATATTTGTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGGACTCTGCTGCCACCCAACTCCCATGAAAAATaGGGTGTCTTATTGCATAAC +
Preference number: 5 (lower is better)
Translates to: PTFNIRVTVSYSGTLLPPNSHEK*GVLLHN
Trigger: GTTATGCAATAAGACACCCAATTTTTCATGGGAGTT...GGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS CCA 90 bp TTGGAGTTCCAGAAGCCATCCTTGGATAACATCTCTATAATCTCCTaGGAGAATCCTTCTTCGAAGAAATCCTCCATCAGAGGAGAGTTC +
Preference number: 5 (lower is better)
Translates to: LEFQKPSLDNISIIS*ENPSSKKSSIRGEF
Trigger: GAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGTCACTTAGGTAGTAGATGGCAGAGGTGGGATTTAACTCAAGGTAGACTGGCTACTTTGTACACTCTTTaGGTATACAACATGCCCATC +
Preference number: 5 (lower is better)
Translates to: GHLGSRWQRWDLTQGRLATLYTL*VYNMPI
Trigger: GATGGGCATGTTGTATACCAAAAGAGTGTACAAAGT...AGCCAGTCTACCTTGAGTTAAATCCCACCTCTGCCATCTACTACCTAAGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACGAGGGCGTTTCTACCTaGGCCTGCAGCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNEGVST*ACSNTG
Trigger: ACCTGTGTTGCTGCAGGCCAAGGTAGAAACGCCCTC...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTTCTAGAGTGGATTCTTaGATGGTGAATGAGCCGAGT +
Preference number: 5 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGSRVDS*MVNEPS
Trigger: ACTCGGCTCATTCACCATCAAAGAATCCACTCTAGA...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTGAATTAACTGATGTTTaGAGAGGTGTGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGELTDV*RGVHCG
Trigger: GCCACAGTGCACACCTCTCAAAACATCAGTTAATTC...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCTCCAGGTGCAAGAGTaGAAAAGCCCAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNLQVQE*KSPRVQ
Trigger: CTGCACCCTTGGGCTTTTCAACTCTTGCACCTGGAG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGACAGAGCTCAAATGTTGCAACCATTaGAAAAACAGTGTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FVHSFGIQHAHLPDKTELKCCNH*KNSVRP
Trigger: GGGCCTTACACTGTTTTTCAAATGGTTGCAACATTT...GAGCTCTGTCTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTTGTTGCACAAGGCGATaGTTATCGCTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCCCTRR*LSLKVS
Trigger: GGAGACTTTCAGCGATAACAATCGCCTTGTGCAACA...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TCAAAGTATGTGTCCAGTGCTTTTCATAAGACTACTGTGTTTCAGCAAAGGTGTCTGAGGACAAAAGCTTaGCCACACACATTACAGGAG +
Preference number: 5 (lower is better)
Translates to: SKYVSSAFHKTTVFQQRCLRTKA*PHTLQE
Trigger: CTCCTGTAATGTGTGTGGCAAAGCTTTTGTCCTCAG...ACACCTTTGCTGAAACACAGTAGTCTTATGAAAAGCACTGGACACATACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CTGCAACACTTTGTACACTCTTTTGGTATACAACATGCCCATCTCCCCGACAAGTATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LQHFVHSFGIQHAHLPDKYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...CTTGTCGGGGAGATGGGCATGTTGTATACCAAAAGAGTGTACAAAGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCATTTGTGGCTTACACTaGGTGAGCCCTCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSICGLH*VSPHVL
Trigger: CAGCACATGAGGGCTCACCAAGTGTAAGCCACAAAT...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACCTGGTAGGGAACTGGTaGTGTGGTTCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNLVGNW*CGSISL
Trigger: CAGTGAGATGGAACCACACAACCAGTTCCCTACCAG...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TTCCTGATGGAATCCAGCTGTGTTTTGGTGTCAACTCCCATGAAAAATTGGGTGAAATGTTGCAACCATTaGAAAAACAGTGTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FLMESSCVLVSTPMKNWVKCCNH*KNSVRP
Trigger: GGGCCTTACACTGTTTTTCAAATGGTTGCAACATTT...CACCCAATTTTTCATGGGAGTTGACACCAAAACACAGCTGGATTCCATCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS CCA 90 bp GTGTCACTACTAGAGGATATGGAGGTATATTTGTTAGTAAAGGCATaGCTACCTATGTTTGGAAACAGCCAATATGCTGAGGTGACAGAA +
Preference number: 5 (lower is better)
Translates to: VSLLEDMEVYLLVKA*LPMFGNSQYAEVTE
Trigger: TTCTGTCACCTCAGCATATTGGCTGTTTCCAAACATAGGTAGCCATGCCTTTACTAACAAATATACCTCCATATCCTCTAGTAGTGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS-3UTR CAA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAAGGTGTTTTCTCAAGTaGAAGGTCGCCTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTRCFLK*KVAWHL
Trigger: CAAGTGCCAGGCGACCTTCAACTTGAGAAAACACCT...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp CAATCTTTAGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACAGGTGTTTTCTCAAGTaGAAGGTCGCCTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: QSLDAFIWRETCNGIVSNRCFLK*KVAWHL
Trigger: CAAGTGCCAGGCGACCTTCAACTTGAGAAAACACCT...GTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCTAAAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTGTGAGTTTTCTGATGTaGGATGAGGTGTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: WRETCNGIVSNFQHPSNGVSFLM*DEVFSQ
Trigger: TTGAGAAAACACCTCATCCAACATCAGAAAACTCAC...ACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACAGCTGATGGCTTTCCCTaGCTCACCCCATTTATACAG +
Preference number: 5 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTADGFP*LTPFIQ
Trigger: CTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAGC...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGGCTTTCTGGCAACGTaGACACTGATAAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSGFLAT*TLIKCL
Trigger: GAGACACTTTATCAGTGTCAACGTTGCCAGAAAGCC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GTTGTTTCATATGCGGTTAACACCCTGATCAATGCAGCTTTCCTGATGGAATCCAACTCCCATGAAAAATaGGGTGTCTTATTGCATAAC +
Preference number: 5 (lower is better)
Translates to: VVSYAVNTLINAAFLMESNSHEK*GVLLHN
Trigger: GTTATGCAATAAGACACCCAATTTTTCATGGGAGTT...GGATTCCATCAGGAAAGCTGCATTGATCAGGGTGTTAACCGCATATGAAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACCACACACCACAGGTTaGACCCCTAAGTATGTCTTC +
Preference number: 5 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTPHTTG*TPKYVF
Trigger: GAAGACATACTTAGGGGTCAAACCTGTGGTGTGTGG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCAATGGGATAGTTTCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTGGACTTTGTACACTCTTTaGGTATACAACATGCCCATC +
Preference number: 5 (lower is better)
Translates to: CNGIVSNFQHPSNGLIFWTLYTL*VYNMPI
Trigger: GATGGGCATGTTGTATACCAAAAGAGTGTACAAAGT...CCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGAAACTATCCCATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCGAATTAACTGATGTTTaGAGAGGTGTGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSELTDV*RGVHCG
Trigger: GCCACAGTGCACACCTCTCAAAACATCAGTTAATTC...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp AGATGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACACTGAGGACAAAAGCTTaGCCACACACATTACAGGAG +
Preference number: 5 (lower is better)
Translates to: RCIYLERNLQWDSFQLSTLRTKA*PHTLQE
Trigger: CTCCTGTAATGTGTGTGGCAAAGCTTTTGTCCTCAG...TGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp GGGTTCATTTCTGATTCCAGAAGCTTCAGAGCAGTAGTGCATAGTGTATGGATATTTTCAAGATGTCACTaGTCAACTAACAGCAATCGT +
Preference number: 5 (lower is better)
Translates to: GFISDSRSFRAVVHSVWIFSRCH*STNSNR
Trigger: ACGATTGCTGTTAGTTGACAAGTGACATCTTGAAAA...TATCCATACACTATGCACTACTGCTCTGAAGCTTCTGGAATCAGAAATGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCTATTTGGAGAGAAACTaGCAATGGGATAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSYLERN*QWDSFQ
Trigger: TTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATA...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS-3UTR CAA 90 bp TGCATTTATTTGGAGAGAAACTTGCAATGGGATAGTTTCCAACTTTCAACATCCTTTTCAAGATGTCACTaGTCAACTAACAGCAATCGT +
Preference number: 5 (lower is better)
Translates to: CIYLERNLQWDSFQLSTSFSRCH*STNSNR
Trigger: ACGATTGCTGTTAGTTGACAAGTGACATCTTGAAAA...GGATGTTGAAAGTTGGAAACTATCCCATTGCAAGTTTCTCTCCAAATAAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
CDS TCA 72 bp TCCTCGCAGCGACTTCCTGTGCGCGAGAAGCTTCTCTaGGCGGCTGCACCCAGGATCCTCCGCGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SSQRLPVREKLL*AAAPRILRGSA
Trigger: GGCGCTGCCGCGGAGGATCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 72 bp CTCCCCGCACACGCGCCTCCTCGCAGCGACTTCCTGTaGGCGAGAAGCTTCTCTGAGCGGCTGCACCCAGGA +
Preference number: 6 (lower is better)
Translates to: LPAHAPPRSDFL*ARSFSERLHPG
Trigger: TCCTGGGTGCAGCCGCTCAGAGAAGCTTCTCGCGCACAGGAAGTCGCTGCGAGGAGGCGCGTGTGCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 72 bp CGCGGCAGCGCCAGGACTCTATTTCCCAGAGGGCTGTaGGGGCGACTTCTTTCGCCTTCCCATCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: RGSARTLFPRGL*GRLLSPSHLLL
Trigger: CAGGAGGAGATGGGAAGGCGAAAGAAGTCGCCCGCACAGCCCTCTGGGAAATAGAGTCCTGGCGCTGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
CDS GCA 72 bp GTGTGGACGAGGTGCTGCACTGGGCGACTCTGGGGATaGCTGTCCTGTAGGGTTCCCAGTCCAGTGATGGAG +
Preference number: 6 (lower is better)
Translates to: VWTRCCTGRLWG*LSCRVPSPVME
Trigger: CTCCATCACTGGACTGGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 72 bp TATCCTGCACGTGGCTCCTGTGTGTGGACGAGGTGCTaGACTGGGCGACTCTGGGGATGCCTGTCCTGTAGG +
Preference number: 6 (lower is better)
Translates to: YPARGSCVWTRC*TGRLWGCLSCR
Trigger: CCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp TCCTGTGTGTGGACGAGGTGCTGCACTGGGCGACTCTaGGGATGCCTGTCCTGTAGGGTTCCCAGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SCVWTRCCTGRL*GCLSCRVPSPV
Trigger: CACTGGACTGGGAACCCTACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CAA 90 bp TGGCTGCTCTCCTGGGAAAAGCCCAGCAGGAAGAGGTCCTGGCAATaGTCCAACGCTGTGTCCCAGAACGTGTCCCCCTGTTCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: WLLSWEKPSRKRSWQ*SNAVSQNVSPCSSP
Trigger: CGGGCTGGAACAGGGGGACACGTTCTGGGACACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCTGGGCTTTTCCCAGGAGAGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS GCA 72 bp CTTTATCCTGCACGTGGCTCCTGTGTGTGGACGAGGTaGTGCACTGGGCGACTCTGGGGATGCCTGTCCTGT +
Preference number: 6 (lower is better)
Translates to: LYPARGSCVWTR*CTGRLWGCLSC
Trigger: ACAGGACAGGCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 72 bp ACTGGTGTGCAGAAGAGGGCGACACAGCAGGCTGGCTaGTCTCCTGGGAAAAGCCCAGCAGGAAGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: TGVQKRATQQAG*SPGKSPAGRGP
Trigger: AGGACCTCTTCCTGCTGGGCTTTTCCCAGGAGAGCAGCCAGCCTGCTGTGTCGCCCTCTTCTGCACACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594968.1
CDS CCA 72 bp AAGCTGGCAACGGGCCAGGAAGGACTATCTACGTGCTaGAGCCTCCAGAAGGAACATGGTGGCCCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: KLATGQEGLSTC*SLQKEHGGPAN
Trigger: GTTGGCAGGGCCACCATGTTCCTTCTGGAGGCTCCAGCACGTAGATAGTCCTTCCTGGCCCGTTGCCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS TCA 72 bp GGCTACAGGCAGTATTGCTGCTTGTTGTGTACACGCTaGTGGCGGCTGAGGCTCGAGTGGCACCGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: GYRQYCCLLCTR*WRLRLEWHRKA
Trigger: AGCCTTTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp GAAGGGAGCTGCAGACTGACTGGATGGGGTACAGCCTaGGATTCCTGTGGTCTCTGGTTCAGGGCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: EGSCRLTGWGTA*DSCGLWFRALL
Trigger: AAGCAGGGCCCTGAACCAGAGACCACAGGAATCTCAGGCTGTACCCCATCCAGTCAGTCTGCAGCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp CAGACTGACTGGATGGGGTACAGCCTGAGATTCCTGTaGTCTCTGGTTCAGGGCCCTGCTTCTCATGCTGGG +
Preference number: 6 (lower is better)
Translates to: QTDWMGYSLRFL*SLVQGPASHAG
Trigger: CCCAGCATGAGAAGCAGGGCCCTGAACCAGAGACCACAGGAATCTCAGGCTGTACCCCATCCAGTCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp GAGCGTGGTGAGCCAAGAAGGGAGCTGCAGACTGACTaGATGGGGTACAGCCTGAGATTCCTGTGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: ERGEPRRELQTD*MGYSLRFLWSL
Trigger: CAGAGACCACAGGAATCTCAGGCTGTACCCCATCCAGTCAGTCTGCAGCTCCCTTCTTGGCTCACCACGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp TTTTCTATGCTTTATCCTGCACGTGGCTCCTGTGTGTaGACGAGGTGCTGCACTGGGCGACTCTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: FSMLYPARGSCV*TRCCTGRLWGC
Trigger: GCATCCCCAGAGTCGCCCAGTGCAGCACCTCGTCCACACACAGGAGCCACGTGCAGGATAAAGCATAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp CCTGAAGCTGAGCGTTGTAATGTCTCGGTAGACCTGTaGGAAAGCTGGCTGCAGCCTCAGGATGGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PEAERCNVSVDL*ESWLQPQDGGL
Trigger: CAGACCTCCATCCTGAGGCTGCAGCCAGCTTTCCCACAGGTCTACCGAGACATTACAACGCTCAGCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp AGGGCCCTGCTTCTCATGCTGGGGACGTCTCTACCATaGGTAATACCCCAGGAATCCTCACCACCTAACCTG +
Preference number: 6 (lower is better)
Translates to: RALLLMLGTSLP*VIPQESSPPNL
Trigger: CAGGTTAGGTGGTGAGGATTCCTGGGGTATTACCCATGGTAGAGACGTCCCCAGCATGAGAAGCAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CAA 72 bp TGGGACTCTGCTGCCACCCAATGGCTACAGGCAGTATaGCTGCTTGTTGTGTACACGCTGATGGCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WDSAATQWLQAV*LLVVYTLMAAE
Trigger: CTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 90 bp CTCATATTCTGGGACTCTGCTGCCACCCAATGGCTACAGGCAGTATaGCTGCTTGTTGTGTACACGCTGATGGCGGCTGAGGCTCGAGTG +
Preference number: 6 (lower is better)
Translates to: LIFWDSAATQWLQAV*LLVVYTLMAAEARV
Trigger: CACTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAATATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp TTCTGCGGTGTGAATGGCCTGATGTCGCATCAGATGTaGGGGCCGGCTGAAACTCCTGACGCATTCCTGACA +
Preference number: 6 (lower is better)
Translates to: FCGVNGLMSHQM*GPAETPDAFLT
Trigger: TGTCAGGAATGCGTCAGGAGTTTCAGCCGGCCCTCACATCTGATGCGACATCAGGCCATTCACACCGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp TTCTCTGGCGTGAACACTCTCGTGGCACTTCAGGGTTaGGCCGCAAATGAAGCGTTCTCCGCACTCCTGACA +
Preference number: 6 (lower is better)
Translates to: FSGVNTLVALQG*AANEAFSALLT
Trigger: TGTCAGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCACGAGAGTGTTCACGCCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp AGTATTGCTGCTTGTTGTGTACACGCTGATGGCGGCTaGGGCTCGAGTGGCACCGAAAGGCTTTCTGGCAAC +
Preference number: 6 (lower is better)
Translates to: SIAACCVHADGG*GSSGTERLSGN
Trigger: GTTGCCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTGTACACAACAAGCAGCAATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 72 bp GCCATGAGTCAAGCAATACAGGTGACCTCCAGAAGCTaGCAACGGGCCAGGAAGGACTATCTACGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: AMSQAIQVTSRS*QRARKDYLRAG
Trigger: TCCAGCACGTAGATAGTCCTTCCTGGCCCGTTGCCAGCTTCTGGAGGTCACCTGTATTGCTTGACTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CAA 90 bp AGGAAAGTAGAGAGACCAACTGAGAGAGTGGAGGGCGTACCCTTGTaGAGTCTGGAAGGAAAGAGGAGGAGCTGTGGAGAGGCACCAGGA +
Preference number: 6 (lower is better)
Translates to: RKVERPTERVEGVPL*SLEGKRRSCGEAPG
Trigger: TCCTGGTGCCTCTCCACAGCTCCTCCTCTTTCCTTCCAGACTCAACAAGGGTACGCCCTCCACTCTCTCAGTTGGTCTCTCTACTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CAA 90 bp AGCAGCTCCAGGCTTATCTCCTATCACCTTAGAAACCAGGGCTTGTaGCTTCTGGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACTGC +
Preference number: 6 (lower is better)
Translates to: SSSRLISYHLRNQGL*LLGFLLPEAPDLHC
Trigger: GCAGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCTAAGGTGATAGGAGATAAGCCTGGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS TCA 72 bp CCAGGACAAGGGGATGGAAGCCAGCGAGAAGCAGAGTaGAGTCCTGAAGCTGAGCGTTGTAATGTCTCGGTA +
Preference number: 6 (lower is better)
Translates to: PGQGDGSQREAE*SPEAERCNVSV
Trigger: TACCGAGACATTACAACGCTCAGCTTCAGGACTTCACTCTGCTTCTCGCTGGCTTCCATCCCCTTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 72 bp TGTGCGGGCGACTTCTTTCGCCTTCCCATCTCCTCCTaGTTCTTCAGCCTTAGCACTTTACTAGAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: CAGDFFRLPISS*FFSLSTLLEVR
Trigger: CCTGACTTCTAGTAAAGTGCTAAGGCTGAAGAAGCAGGAGGAGATGGGAAGGCGAAAGAAGTCGCCCGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595661.5
ENST00000598809.5
CDS CCA 72 bp ACTTCCTTAGCCATTCATGATTTATTCACTGACCCATaGGCCACACATTGCCTGAGGCCTCCATGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TSLAIHDLFTDP*ATHCLRPPWAR
Trigger: CCTGGCCCATGGAGGCCTCAGGCAATGTGTGGCCCATGGGTCAGTGAATAAATCATGAATGGCTAAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp TCTCCTATCACCTTAGAAACCAGGGCTTGTTGCTTCTaGGCTTCCTCCTGCCAGAGGCTCCAGATCTTCACT +
Preference number: 6 (lower is better)
Translates to: SPITLETRACCF*ASSCQRLQIFT
Trigger: AGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCTAAGGTGATAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS CAA 72 bp GAGGCTCGAGTGGCACCGAAAGGCTTTCTGGCAACGTaGACACTGATAAAGTGTCTCCTGGGTGTGAACTCT +
Preference number: 6 (lower is better)
Translates to: EARVAPKGFLAT*TLIKCLLGVNS
Trigger: AGAGTTCACACCCAGGAGACACTTTATCAGTGTCAACGTTGCCAGAAAGCCTTTCGGTGCCACTCGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 72 bp AGGCTTATCTCCTATCACCTTAGAAACCAGGGCTTGTaGCTTCTGGGCTTCCTCCTGCCAGAGGCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: RLISYHLRNQGL*LLGFLLPEAPD
Trigger: ATCTGGAGCCTCTGGCAGGAGGAAGCCCAGAAGCAACAAGCCCTGGTTTCTAAGGTGATAGGAGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601364.5
CDS CCA 72 bp TCCTTGAGGGTCACAAATTCCTCAGCCATGGCCAACTaGGGTTCAGTAGCCTCTTTTAAGCTCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SLRVTNSSAMAN*GSVASFKLLLL
Trigger: AAGGAGGAGGAGCTTAAAAGAGGCTACTGAACCCCAGTTGGCCATGGCTGAGGAATTTGTGACCCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000595661.5
ENST00000598809.5
ENST00000599155.1
ENST00000601364.5
CDS CCA 72 bp CATGACTCTTGCATTCCGTGGGACTTTCCCCGTTGGTaGCAATATCAGACCTCAGAAGACTTTCTGGATCGC +
Preference number: 6 (lower is better)
Translates to: HDSCIPWDFPRW*QYQTSEDFLDR
Trigger: GCGATCCAGAAAGTCTTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 72 bp AACGGTCTCATATTCTGGGACTCTGCTGCCACCCAATaGCTACAGGCAGTATTGCTGCTTGTTGTGTACACG +
Preference number: 6 (lower is better)
Translates to: NGLIFWDSAATQ*LQAVLLLVVYT
Trigger: CGTGTACACAACAAGCAGCAATACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp TACAGGCCACAGCGGAGAAAACGCCACTGCTGTCTTTaGAGACTGAGAAGCCATGAGTCAAGCAATACAGGT +
Preference number: 6 (lower is better)
Translates to: YRPQRRKRHCCL*RLRSHESSNTG
Trigger: ACCTGTATTGCTTGACTCATGGCTTCTCAGTCTTCAAAGACAGCAGTGGCGTTTTCTCCGCTGTGGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS GCA 72 bp ATTCATGATTTATTCACTGACCCATGGGCCACACATTaGCTGAGGCCTCCATGGGCCAGGGACAGAAAATGT +
Preference number: 6 (lower is better)
Translates to: IHDLFTDPWATH*LRPPWARDRKC
Trigger: ACATTTTCTGTCCCTGGCCCATGGAGGCCTCAGGCAATGTGTGGCCCATGGGTCAGTGAATAAATCATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CCA 72 bp TCCAACTTTCAACATCCGAGTAACGGTCTCATATTCTaGGACTCTGCTGCCACCCAATGGCTACAGGCAGTA +
Preference number: 6 (lower is better)
Translates to: SNFQHPSNGLIF*DSAATQWLQAV
Trigger: TACTGCCTGTAGCCATTGGGTGGCAGCAGAGTCCCAGAATATGAGACCGTTACTCGGATGTTGAAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 72 bp CGGATACACAGAAAGGGAAGCATTCCGGTCAAAACCTaGCTCACACTCTTGATGGACAGTGGGTTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: RIHRKGSIPVKT*LTLLMDSGFLP
Trigger: AGGGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAATGCTTCCCTTTCTGTGTATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp TGGAATCTTCTCCCGTGGAAACGGTGGACACAGGACTaGGTCCTCTCTTTAATTCATGACTCTTGCATTCCG +
Preference number: 6 (lower is better)
Translates to: WNLLPWKRWTQD*VLSLIHDSCIP
Trigger: CGGAATGCAAGAGTCATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCGTTTCCACGGGAGAAGATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 72 bp GAGTTTTCTGATGCTCACCAGGCTGTGTGTCATGACTaGGTGGGTGGTCACTATCTTGACTCTTACATGGTT +
Preference number: 6 (lower is better)
Translates to: EFSDAHQAVCHD*VGGHYLDSYMV
Trigger: AACCATGTAAGAGTCAAGATAGTGACCACCCACCCAGTCATGACACACAGCCTGGTGAGCATCAGAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 90 bp ATACACAGAAAGGGAAGCATTCCGGTCAAAACCTTGCTCACACTCTaGATGGACAGTGGGTTTCTCCCTAGTATGAGTGATCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: IHRKGSIPVKTLLTL*MDSGFLPSMSDPVL
Trigger: CAGCACTGGATCACTCATACTAGGGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAATGCTTCCCTTTCTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 90 bp GTGAGTTTTCGGATACACAGAAAGGGAAGCATTCCGGTCAAAACCTaGCTCACACTCTTGATGGACAGTGGGTTTCTCCCTAGTATGAGT +
Preference number: 6 (lower is better)
Translates to: VSFRIHRKGSIPVKT*LTLLMDSGFLPSMS
Trigger: ACTCATACTAGGGAGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAATGCTTCCCTTTCTGTGTATCCGAAAACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS TCA 72 bp GCATTTTCTGGTGTTGCACAAGGCGATTGTTATCGCTaGAAGTCTCCTTGCATTCAGCACAGCTATAGGGCT +
Preference number: 6 (lower is better)
Translates to: AFSGVAQGDCYR*KSPCIQHSYRA
Trigger: AGCCCTATAGCTGTGCTGAATGCAAGGAGACTTTCAGCGATAACAATCGCCTTGTGCAACACCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 72 bp ATTCATGACTCTTGCATTCCGTGGGACTTTCCCCGTTaGTGGCAATATCAGACCTCAGAAGACTTTCTGGAT +
Preference number: 6 (lower is better)
Translates to: IHDSCIPWDFPR*WQYQTSEDFLD
Trigger: ATCCAGAAAGTCTTCTGAGGTCTGATATTGCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CCA 72 bp TTTCTGATGCTCACCAGGCTGTGTGTCATGACTGGGTaGGTGGTCACTATCTTGACTCTTACATGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: FLMLTRLCVMTG*VVTILTLTWFF
Trigger: GAAAAACCATGTAAGAGTCAAGATAGTGACCACCCACCCAGTCATGACACACAGCCTGGTGAGCATCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 72 bp CAGGCTTCTCCGAAATTGGAGTTCCAGAAGCCATCCTaGGATAACATCTCTATAATCTCCTGGGAGAATCCT +
Preference number: 6 (lower is better)
Translates to: QASPKLEFQKPS*DNISIISWENP
Trigger: AGGATTCTCCCAGGAGATTATAGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 72 bp TCTAACCAGGTGTCCTCTATACAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCCTTGGATAACATCTCT +
Preference number: 6 (lower is better)
Translates to: SNQVSSIQASPK*EFQKPSLDNIS
Trigger: AGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTGTATAGAGGACACCTGGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 90 bp TCCTCTATACAGGCTTCTCCGAAATTGGAGTTCCAGAAGCCATCCTaGGATAACATCTCTATAATCTCCTGGGAGAATCCTTCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: SSIQASPKLEFQKPS*DNISIISWENPSSK
Trigger: CTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTGTATAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 90 bp AGCAAACTATCTAACCAGGTGTCCTCTATACAGGCTTCTCCGAAATaGGAGTTCCAGAAGCCATCCTTGGATAACATCTCTATAATCTCC +
Preference number: 6 (lower is better)
Translates to: SKLSNQVSSIQASPK*EFQKPSLDNISIIS
Trigger: GGAGATTATAGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTGTATAGAGGACACCTGGTTAGATAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270617.8
ENST00000391821.6
ENST00000445728.7
ENST00000595661.5
CDS CAA 72 bp ACTCAAGTGTCACTACTAGAGGATATGGAGGTATATTaGTTAGTAAAGGCATGGCTACCTATGTTTGGAAAC +
Preference number: 6 (lower is better)
Translates to: TQVSLLEDMEVY*LVKAWLPMFGN
Trigger: GTTTCCAAACATAGGTAGCCATGCCTTTACTAACAAATATACCTCCATATCCTCTAGTAGTGACACTTGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1
CDS CAA 90 bp AACTATGCAACTCAAGTGTCACTACTAGAGGATATGGAGGTATATTaGTTAGTAAAGGCATGGCTACCTATGTTTGGAAACAGCCAATAT +
Preference number: 6 (lower is better)
Translates to: NYATQVSLLEDMEVY*LVKAWLPMFGNSQY
Trigger: ATATTGGCTGTTTCCAAACATAGGTAGCCATGCCTTTACTAACAAATATACCTCCATATCCTCTAGTAGTGACACTTGAGTTGCATAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598802.1