RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF470 (Homo sapiens)

Ensembl gene IDs: ENSG00000197016

Ensembl transcript IDs: ENST00000330619.13, ENST00000391709.4, ENST00000594953.1, ENST00000601059.1, ENST00000601579.1, ENST00000601902.5

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTaGAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTC +
Preference number: 1 (lower is better)
Translates to: RCWQGWFLVRSLLLA*RWQHSCCVLTQHFL
Trigger: GAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR GCA 90 bp GGCTCACAGTTCTGCAGGCTGTACAGCAAACATGACATTGGCATTTaGTTGACTTCTGGGGAGGCCACAGGAGGCTTACAATCATGGCAA +
Preference number: 1 (lower is better)
Translates to: GSQFCRLYSKHDIGI*LTSGEATGGLQSWQ
Trigger: TTGCCATGATTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR CCA 90 bp TATTTTCTCACAGTCCTGGAGATTAAAAGTCCAAGATCAAGGTGCTaGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTGCAGA +
Preference number: 1 (lower is better)
Translates to: YFLTVLEIKSPRSRC*QGWFLVRSLLLACR
Trigger: TCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTCCAGGACTGTGAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR GCA 90 bp ATTTATTTTCTCACAGTCCTGGAGATTAAAAGTCCAAGATCAAGGTaGTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTGC +
Preference number: 1 (lower is better)
Translates to: IYFLTVLEIKSPRSR*WQGWFLVRSLLLAC
Trigger: GCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTCCAGGACTGTGAGAAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR TCA 90 bp AAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGCAAACATaGCATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTT +
Preference number: 1 (lower is better)
Translates to: KRFNWLTVLQAVQQT*HWHLLDFWGGHRRL
Trigger: AAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAATTAAACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR CCA 90 bp GTGAAGAGGGAGCCCCAAACTCCATTTTCTAGCAGTCATGTACTCTaGATAACGGCTTCCCTCACATGGCCCTCTATACTTCCACAGAAA +
Preference number: 1 (lower is better)
Translates to: VKREPQTPFSSSHVL*ITASLTWPSILPQK
Trigger: TTTCTGTGGAAGTATAGAGGGCCATGTGAGGGAAGCCGTTATCCAGAGTACATGACTGCTAGAAAATGGAGTTTGGGGCTCCCTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 90 bp TTGTACACTTTAAGTGGAACTTTGGGGCTCCCTCTTCACTTCTGCTaGTGGATACAGAGAGAAGGATATGGGTGTTCTCCAGAATTGCTT +
Preference number: 1 (lower is better)
Translates to: LYTLSGTLGLPLHFC*WIQREGYGCSPELL
Trigger: AAGCAATTCTGGAGAACACCCATATCCTTCTCTCTGTATCCATCAGCAGAAGTGAAGAGGGAGCCCCAAAGTTCCACTTAAAGTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 90 bp CAACAAGTAAATTTGGTGGTGGTAGAGGCCAGCATTTGGTGGTGCTaGTGGGAACACAATTCAGAACTGAATTCACAATTCAATTCACAG +
Preference number: 1 (lower is better)
Translates to: QQVNLVVVEASIWWC*WEHNSELNSQFNSQ
Trigger: CTGTGAATTGAATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 90 bp GGACTTCAACAAGTAAATTTGGTGGTGGTAGAGGCCAGCATTTGGTaGTGCTGGTGGGAACACAATTCAGAACTGAATTCACAATTCAAT +
Preference number: 1 (lower is better)
Translates to: GLQQVNLVVVEASIW*CWWEHNSELNSQFN
Trigger: ATTGAATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 90 bp TTAGGACTTCAACAAGTAAATTTGGTGGTGGTAGAGGCCAGCATTTaGTGGTGCTGGTGGGAACACAATTCAGAACTGAATTCACAATTC +
Preference number: 1 (lower is better)
Translates to: LGLQQVNLVVVEASI*WCWWEHNSELNSQF
Trigger: GAATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAGTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR GCA 90 bp CTTCAACAAGTAAATTTGGTGGTGGTAGAGGCCAGCATTTGGTGGTaGTGGTGGGAACACAATTCAGAACTGAATTCACAATTCAATTCA +
Preference number: 1 (lower is better)
Translates to: LQQVNLVVVEASIWW*WWEHNSELNSQFNS
Trigger: TGAATTGAATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR GCA 90 bp CAGGGTAAGAGTCCAGCTGGTACTTACCTGTCCCCACTCTCAACATaGATTCTCTATTTCTTTCTTCATGTCTTTCTTTCTTCTTTTCAA +
Preference number: 1 (lower is better)
Translates to: QGKSPAGTYLSPLST*ILYFFLHVFLSSFQ
Trigger: TTGAAAAGAAGAAAGAAAGACATGAAGAAAGAAATAGAGAATGCATGTTGAGAGTGGGGACAGGTAAGTACCAGCTGGACTCTTACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR TCA 90 bp CTTCGTACCAAATTCTGTATGATTGTTTCTTTACTTGCAAGCAACTaGCCAACAGGAGGCAAAAATCAAGTACCGGAAAGACAATGGGTA +
Preference number: 1 (lower is better)
Translates to: LRTKFCMIVSLLASN*PTGGKNQVPERQWV
Trigger: TACCCATTGTCTTTCCGGTACTTGATTTTTGCCTCCTGTTGGTCAGTTGCTTGCAAGTAAAGAAACAATCATACAGAATTTGGTACGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CAA 90 bp AAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTaGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCT +
Preference number: 2 (lower is better)
Translates to: KVLAGLVPGEVSPPG*QMAAFLLCPYTAFP
Trigger: AGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR-3UTR GCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCGACAGTGTCTGGCTCTaGTGCCCAGCTGGAATTGCA +
Preference number: 2 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSDSVWL*CPAGIA
Trigger: TGCAATTCCAGCTGGGCAGCAGAGCCAGACACTGTC...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp AGGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGCAAACATGACGAGGGACCTGCCCCATaGTCCAAACACCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: RKRGLIGSQFCRLYSKHDEGPAP*SKHLPP
Trigger: TGGTGGGAGGTGTTTGGATCATGGGGCAGGTCCCTC...GTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAATTAAACCTCTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR-3UTR TCA 90 bp AGGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGCAAACATGACAGCCAGTGCCTAGGCTaGACCTATACCGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: RKRGLIGSQFCRLYSKHDSQCLG*TYTASS
Trigger: TGAGGATGCGGTATAGGTTCAGCCTAGGCACTGGCT...GTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAATTAAACCTCTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR-3UTR TCA 90 bp AGGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGCAAACATGACCATGGCAAAAACACATaGGCAAGACAGAAGGGGCGA +
Preference number: 2 (lower is better)
Translates to: RKRGLIGSQFCRLYSKHDHGKNT*ARQKGR
Trigger: TCGCCCCTTCTGTCTTGCTCATGTGTTTTTGCCATG...GTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAATTAAACCTCTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR-3UTR GCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCAACAGTTATGCTACTaGAGAAATCCAGATGAGATG +
Preference number: 2 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSQQLCY*RNPDEM
Trigger: CATCTCATCTGGATTTCTGCAGTAGCATAACTGTTG...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp CTGTACAGCAAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGACACTTTCTGGAAGTCTaGGATAATTGGCAACGTTTT +
Preference number: 2 (lower is better)
Translates to: LYSKHDIGICLTSGEATGHFLEV*DNWQRF
Trigger: AAAACGTTGCCAATTATCTCAGACTTCCAGAAAGTG...TCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR-3UTR GCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAATTAGCAATAACTATATaGCAGTGTGTGCTAAATCCT +
Preference number: 2 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQLAITI*QCVLNP
Trigger: AGGATTTAGCACACACTGGCATATAGTTATTGCTAA...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCAGTGTCTGGCTCTGCTaGCCAGCTGGAATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFSVWLC*PAGIAV
Trigger: CACTGCAATTCCAGCTGGGCAGCAGAGCCAGACACT...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CAA 90 bp ACCAACAGGAGGCAAAAATCAAGTACCGGAAAGACAATGGGTAGTTaGAGGAATCACAGACTTGGAAAGTACAAAAACCAGGGTGGTTCC +
Preference number: 2 (lower is better)
Translates to: TNRRQKSSTGKTMGS*RNHRLGKYKNQGGS
Trigger: GGAACCACCCTGGTTTTTGTACTTTCCAAGTCTGTGATTCCTCAAACTACCCATTGTCTTTCCGGTACTTGATTTTTGCCTCCTGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp GTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATGGTGATCATGACTCACTaGAACCTCTACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: VTFGLLLPTLVSPTFYQMVIMTH*NLYLLG
Trigger: GCCCAGGAGGTAGAGGTTGCAGTGAGTCATGATCAC...CATTTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTGTCTGGCTCTGCTaGCCAGCTGGAATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: MEFPCFHTFTNTECYHSISVWLC*PAGIAV
Trigger: CACTGCAATTCCAGCTGGGCAGCAGAGCCAGACACT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAGGTGTTCTCCAGAATTaGTTTGTCTCAATAAAGCTG +
Preference number: 2 (lower is better)
Translates to: FHRKQLRGNPRALGASVEGVLQN*FVSIKL
Trigger: CAGCTTTATTGAGACAAAGCAATTCTGGAGAACACC...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATCAACAGTTATGCTACTaGAGAAATCCAGATGAGATG +
Preference number: 2 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHQQLCY*RNPDEM
Trigger: CATCTCATCTGGATTTCTGCAGTAGCATAACTGTTG...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp AAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTTACAATCCCCACTCTCAACATaGATTCTCTATTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: KHDIGICLTSGEATGGLQSPLST*ILYFFL
Trigger: AAGAAAGAAATAGAGAATGCATGTTGAGAGTGGGGA...TTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR CAA 90 bp TTTAGGACTTCAACAAGTAAATTTGGTGGTGGTAGAGGCCAGCATTaGGTGGTGCTGGTGGGAACACAATTCAGAACTGAATTCACAATT +
Preference number: 2 (lower is better)
Translates to: FRTSTSKFGGGRGQH*VVLVGTQFRTEFTI
Trigger: AATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAGTCCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTCTGCCCAGCTGGAATTaGAGTGGTGTGATCATGACT +
Preference number: 2 (lower is better)
Translates to: EFPCFHTFTNTECYHSISLPSWN*SGVIMT
Trigger: AGTCATGATCACACCACTGCAATTCCAGCTGGGCAG...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CAA 90 bp AGCCACCATGTTACCTTGTGTACCATAAATCTTTCAATTCTGAGTTaGTTCATCTTTCCTCTCTACCAGGAGAGTAGTCTTCTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: SHHVTLCTINLSILS*FIFPLYQESSLLSA
Trigger: AGCAGACAGAAGACTACTCTCCTGGTAGAGAGGAAAGATGAACAAACTCAGAATTGAAAGATTTATGGTACACAAGGTAACATGGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CCA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAACCCCATCTCCAGCACTaGGGATTACAATCTAACATG +
Preference number: 2 (lower is better)
Translates to: CHTFLKDLISQELTHYREPHLQH*GLQSNM
Trigger: CATGTTAGATTGTAATCCCCAGTGCTGGAGATGGGG...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR-3UTR TCA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAACAGTGTCAGGTAAAGTaGGAGTTGCTCATCAACAAT +
Preference number: 2 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQQCQVK*ELLINN
Trigger: ATTGTTGATGAGCAACTCTCACTTTACCTGACACTG...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCCAGTGTCAGGTAAAGTaGGAGTTGCTCATCAACAAT +
Preference number: 2 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFQCQVK*ELLINN
Trigger: ATTGTTGATGAGCAACTCTCACTTTACCTGACACTG...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTTTTCCCAATGCCATTTaGTCAAACCACCTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIFPNAI*SNHLFP
Trigger: GGGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAA...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCAGACAATGGGTAGTTTaGGGAATCACAGACTTGGAA +
Preference number: 2 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFRQWVV*GITDLE
Trigger: TTCCAAGTCTGTGATTCCTCAAACTACCCATTGTCT...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR TCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTTATATAAGGAGAGTCTaGAAGCTCCACATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: EFPCFHTFTNTECYHSISYIRRV*KLHILW
Trigger: CCAGAGAATGTGGAGCTTTCAGACTCTCCTTATATA...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR GCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTGGTGTTCTCCAGAATTaGTTTGTCTCAATAAAGCTG +
Preference number: 2 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIGVLQN*FVSIKL
Trigger: CAGCTTTATTGAGACAAAGCAATTCTGGAGAACACC...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGTTGGCTTGTTACTTTTaGTTTACTACTACCTACCCT +
Preference number: 2 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRLACYF*FTTTYP
Trigger: AGGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAA...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp GAACTCACTCATTATCGAGAAGACAGCACCGTGCCATaGGGGACCTGCCCCATGATCCAAACACCTCCCACC +
Preference number: 3 (lower is better)
Translates to: ELTHYREDSTVP*GTCPMIQTPPT
Trigger: GGTGGGAGGTGTTTGGATCATGGGGCAGGTCCCTCATGGCACGGTGCTGTCTTCTCGATAATGAGTGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR GCA 72 bp CAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTaGAGATGGCAGCATTCTTGTTGTGTCCTTACACAG +
Preference number: 3 (lower is better)
Translates to: QGWFLVRSLLLA*RWQHSCCVLTQ
Trigger: CTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR GCA 72 bp CTCACAGTCCTGGAGATTAAAAGTCCAAGATCAAGGTaGTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: LTVLEIKSPRSR*WQGWFLVRSLL
Trigger: GAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTCCAGGACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR CCA 72 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTaGTTCCTGGTGAGGTCTCTCCTCCTGGCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: EIKSPRSRCWQG*FLVRSLLLACR
Trigger: TCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR CCA 72 bp ACAGTCCTGGAGATTAAAAGTCCAAGATCAAGGTGCTaGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: TVLEIKSPRSRC*QGWFLVRSLLL
Trigger: CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTCCAGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
3UTR TCA 72 bp GCAGGCTGTACAGCAAACATGACATTGGCATTTGCTTaGCTTCTGGGGAGGCCACAGGAGGCTTACAATCAT +
Preference number: 3 (lower is better)
Translates to: AGCTANMTLAFA*LLGRPQEAYNH
Trigger: ATGATTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR TCA 72 bp AATTGGCTCACAGTTCTGCAGGCTGTACAGCAAACATaGCATTGGCATTTGCTTGACTTCTGGGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: NWLTVLQAVQQT*HWHLLDFWGGH
Trigger: GTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
3UTR CCA 72 bp AGCAGTCATGTACTCTGGATAACGGCTTCCCTCACATaGCCCTCTATACTTCCACAGAAAGCAGTTAAGAGG +
Preference number: 3 (lower is better)
Translates to: SSHVLWITASLT*PSILPQKAVKR
Trigger: CCTCTTAACTGCTTTCTGTGGAAGTATAGAGGGCCATGTGAGGGAAGCCGTTATCCAGAGTACATGACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 72 bp GAGCCCCAAACTCCATTTTCTAGCAGTCATGTACTCTaGATAACGGCTTCCCTCACATGGCCCTCTATACTT +
Preference number: 3 (lower is better)
Translates to: EPQTPFSSSHVL*ITASLTWPSIL
Trigger: AAGTATAGAGGGCCATGTGAGGGAAGCCGTTATCCAGAGTACATGACTGCTAGAAAATGGAGTTTGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp TTAAGTGGAACTTTGGGGCTCCCTCTTCACTTCTGCTaGTGGATACAGAGAGAAGGATATGGGTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LSGTLGLPLHFC*WIQREGYGCSP
Trigger: TGGAGAACACCCATATCCTTCTCTCTGTATCCATCAGCAGAAGTGAAGAGGGAGCCCCAAAGTTCCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp AAAGGGGCAACAGTTATGCTACTGCAGAAATCCAGATaGGATGGTTGCGTCTTGGACTATGATGATGGGACA +
Preference number: 3 (lower is better)
Translates to: KGATVMLLQKSR*DGCVLDYDDGT
Trigger: TGTCCCATCATCATAGTCCAAGACGCAACCATCTCATCTGGATTTCTGCAGTAGCATAACTGTTGCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAATAAAGGCCAAAGTATaGAACTACCCTTTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: FHRKQLRGNPRALGASVEIKAKV*NYPFQC
Trigger: ACACTGAAAAGGGTAGTTCAATACTTTGGCCTTTAT...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp GCATTTGGTGGTGCTGGTGGGAACACAATTCAGAACTaGATTCACAATTCAATTCACAGTGACTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: AFGGAGGNTIQN*IHNSIHSDSCE
Trigger: TTCACAAGAGTCACTGTGAATTGAATTGTGAATTCAGTTCTGAATTGTGTTCCCACCAGCACCACCAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 72 bp GAGGAATCACAGACTTGGAAAGTACAAAAACCAGGGTaGTTCCAAGGACCAATCAAAAGAATAACTGCATCA +
Preference number: 3 (lower is better)
Translates to: EESQTWKVQKPG*FQGPIKRITAS
Trigger: TGATGCAGTTATTCTTTTGATTGGTCCTTGGAACCACCCTGGTTTTTGTACTTTCCAAGTCTGTGATTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCGTTTCCCAATGCCATTaGATCAAACCACCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFVSQCH*IKPPFP
Trigger: GGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAAC...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGTCAGCTTTTAGGGAGTaGCCATTGGATGACACAGAT +
Preference number: 3 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRSAFRE*PLDDTD
Trigger: ATCTGTGTCATCCAATGGCAACTCCCTAAAAGCTGA...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGTTTGGCTTGTTACTTTaGGTTTACTACTACCTACCC +
Preference number: 3 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRFGLLL*VYYYLP
Trigger: GGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAAA...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp AAATTGATGGTGGTGATGGTTGCACAACTCCGTGAATaGACTAAAAGCCATAAGTTGTACACTTTAAGTGGA +
Preference number: 3 (lower is better)
Translates to: KLMVVMVAQLRE*TKSHKLYTLSG
Trigger: TCCACTTAAAGTGTACAACTTATGGCTTTTAGTTCATTCACGGAGTTGTGCAACCATCACCACCATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR GCA 72 bp CCTTCCTCCAACACTCAAAGCATCATAAACAATATCTaGCTTGGGACTATCATGACTATTTTCATTATGCCT +
Preference number: 3 (lower is better)
Translates to: PSSNTQSIINNI*LGTIMTIFIMP
Trigger: AGGCATAATGAAAATAGTCATGATAGTCCCAAGGCAGATATTGTTTATGATGCTTTGAGTGTTGGAGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGCTTTCAATTCTGAGTTaGTTCATCTTTCCTCTCTAC +
Preference number: 3 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRLSILS*FIFPLY
Trigger: GTAGAGAGGAAAGATGAACAAACTCAGAATTGAAAG...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTATGTTTTGGCATGTCTaGTCAATCTCATGGAACAAG +
Preference number: 3 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIMFWHV*SISWNK
Trigger: CTTGTTCCATGAGATTGACAAGACATGCCAAAACAT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR-3UTR CAA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCTTTTCATTATGCCTTTaGTGTCTCACAGTTACCTCT +
Preference number: 3 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFFSLCL*CLTVTS
Trigger: AGAGGTAACTGTGAGACACAAAAGGCATAATGAAAA...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp AAATTCTGTATGATTGTTTCTTTACTTGCAAGCAACTaGCCAACAGGAGGCAAAAATCAAGTACCGGAAAGA +
Preference number: 3 (lower is better)
Translates to: KFCMIVSLLASN*PTGGKNQVPER
Trigger: TCTTTCCGGTACTTGATTTTTGCCTCCTGTTGGTCAGTTGCTTGCAAGTAAAGAAACAATCATACAGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR TCA 72 bp AATACCCTTCCACCAGCTTCTAAATCAACATTTATATaGGTGAACATAACTGCCATGATCTCTGTTAAACCA +
Preference number: 3 (lower is better)
Translates to: NTLPPASKSTFI*VNITAMISVKP
Trigger: TGGTTTAACAGAGATCATGGCAGTTATGTTCACTCATATAAATGTTGATTTAGAAGCTGGTGGAAGGGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CCA 72 bp CTCCAACACTCAAAGCATCATAAACAATATCTGCCTTaGGACTATCATGACTATTTTCATTATGCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LQHSKHHKQYLP*DYHDYFHYAFC
Trigger: ACAAAAGGCATAATGAAAATAGTCATGATAGTCCCAAGGCAGATATTGTTTATGATGCTTTGAGTGTTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTGCAACCGGCGGGACGTaGACTCGCCCGGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLAATGGT*TRPALG
Trigger: ACCCAAAGCCGGGCGAGTGCACGTCCCGCCGGTTGC...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTCCCTGTCCTGGGCTCTaGCCCTTCCAGATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLAPCPGL*PFQIGL
Trigger: CAGCCCTATCTGGAAGGGGCAGAGCCCAGGACAGGG...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCCGTCCTGTGGACATaGAGCCCTGTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLAVLWT*SPVLGS
Trigger: AGAGCCCAGGACAGGGCTCCATGTCCACAGGACGGC...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTAGGTGCTGGCAGGGCTaGTTCCTGGTGAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLARCWQG*FLVRSL
Trigger: GAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCT...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCGTAGAGGCCAGCATTTaGTGGTGCTGGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGVEASI*WCWAQA
Trigger: GGCCTGTGCCCAGCACCACCAAATGCTGGCCTCTAC...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594953.1
CDS-3UTR TCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGAGGGCTGGTTCCTGGTaGGGTCTCTCCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLRAGSW*GLSSWL
Trigger: AAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCT...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGCACGCTCACCACGTATaGGCACTCACAGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLHAHHV*ALTATR
Trigger: CCTGGTGGCTGTGAGTGCCCATACGTGGTGAGCGTG...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGAGGTGCTGGCAGGGCTaGTTCCTGGTGAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLRCWQG*FLVRSL
Trigger: GAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCT...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR GCA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCACGCCGCCGGGCCATaGACGCAGGCGCAGATTCGC +
Preference number: 4 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNHAAGP*TQAQIR
Trigger: GCGAATCTGCGCCTGCGTGCATGGCCCGGCGGCGTG...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TACAGCAAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTGCTTCAGCCGAGGCTaGCCCGCCCGGGCAACTTCC +
Preference number: 4 (lower is better)
Translates to: YSKHDIGICLTSGEATGGCFSRG*PARATS
Trigger: GGAAGTTGCCCGGGCGGGGCAGCCTCGGCTGAAGCA...GCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCGACAGTGTCTGGCTCTaGTGCCCAGCTGGAATTGCA +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGDSVWL*CPAGIA
Trigger: TGCAATTCCAGCTGGGCAGCAGAGCCAGACACTGTC...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTGTAGAGGCCAGCATTTaGTGGTGCTGGTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLAVEASI*WCWWEH
Trigger: GTGTTCCCACCAGCACCACCAAATGCTGGCCTCTAC...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCTGCTTCAGCCGAGGCTaGCCCGCCCGGGCAACTTCC +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSCFSRG*PARATS
Trigger: GGAAGTTGCCCGGGCGGGGCAGCCTCGGCTGAAGCA...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAACTCCTCGCCGTCCTGTaGACATGGAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQLLAVL*TWSPVL
Trigger: CAGGACAGGGCTCCATGTCCACAGGACGGCGAGGAG...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp CCGCATCCTCAGGACCAACAGCCCAGGGTAAGAGTCCAGCTGGTACTTACCTGTTCCGGCCGGGTTTCCTaGTCTTGGCCACTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: PHPQDQQPRVRVQLVLTCSGRVS*SWPLKV
Trigger: CACTTTAAGTGGCCAAGAGCAGGAAACCCGGCCGGA...ACAGGTAAGTACCAGCTGGACTCTTACCCTGGGCTGTTGGTCCTGAGGATGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCCTGCCCAGCTGGAATTaGAGTGGTGTGATCATGACT +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGLPSWN*SGVIMT
Trigger: AGTCATGATCACACCACTGCAATTCCAGCTGGGCAG...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTCTCTCCTCCTGGCTTaGAGATGGCAGCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLASLLLA*RWQHSC
Trigger: ACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGA...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGACGGCTTCCCTCACATaGCCCTCTATACTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLTASLT*PSILPQ
Trigger: CTGTGGAAGTATAGAGGGCCATGTGAGGGAAGCCGT...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTCCTCTGTGCACATGTaGAGAGACAAACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLASSVHM*RDKPLV
Trigger: CACCAGAGGTTTGTCTCTCCACATGTGCACAGAGGA...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTAGGGCTGGTTCCTGGTaGGGTCTCTCCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSRAGSW*GLSSWL
Trigger: AAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp CTGTACAGCAAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGCCGTCCTGTGGACATaGAGCCCTGTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LYSKHDIGICLTSGEATGAVLWT*SPVLGS
Trigger: AGAGCCCAGGACAGGGCTCCATGTCCACAGGACGGC...TCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp CTGTACAGCAAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGACTCCTCGCCGTCCTGTaGACATGGAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYSKHDIGICLTSGEATGLLAVL*TWSPVL
Trigger: CAGGACAGGGCTCCATGTCCACAGGACGGCGAGGAG...TCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGTCCTCTGTGCACATGTaGAGAGACAAACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLSSVHM*RDKPLV
Trigger: CACCAGAGGTTTGTCTCTCCACATGTGCACAGAGGA...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTGAGGCCAGCATTTGGTaGTGCTGGGCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSEASIW*CWAQAS
Trigger: AGAGGCCTGTGCCCAGCACCACCAAATGCTGGCCTC...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594953.1
3UTR CAA 72 bp GCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTaGCAGATGGCAGCATTCTTGTTGTGTCCTTACACA +
Preference number: 4 (lower is better)
Translates to: AGLVPGEVSPPG*QMAAFLLCPYT
Trigger: TGTGTAAGGACACAACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGCCTCTTCACTTCTGCTaGTGGATACAGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLPLHFC*WIQREG
Trigger: TCCTTCTCTCTGTATCCATCAGCAGAAGTGAAGAGG...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTTCCCAATGCCATTTaGTCAAACCACCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGFPNAI*SNHLFP
Trigger: GGGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAA...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACGAGGGACCTGCCCCATaGTCCAAACACCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNEGPAP*SKHLPP
Trigger: TGGTGGGAGGTGTTTGGATCATGGGGCAGGTCCCTC...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCAGGGCTGACAGGAAATaGTTCAGCCGAGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSRADRK*FSRGCP
Trigger: GGGGCAGCCTCGGCTGAAGCATTTCCTGTCAGCCCT...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAAGTGTCTGGCTCTGCTaGCCAGCTGGAATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQSVWLC*PAGIAV
Trigger: CACTGCAATTCCAGCTGGGCAGCAGAGCCAGACACT...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCACAGCATTTCCTCTGTaGACATGTGGAGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGTAFPL*TCGETN
Trigger: GTTTGTCTCTCCACATGTGCACAGAGGAAATGCTGT...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCACATTCTCTGGTaGGACTACCCATCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSLHILW*DYPSPS
Trigger: GCTAGGGGATGGGTAGTCTCACCAGAGAATGTGGAG...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTATATAAGGAGAGTCTaGAAGCTCCACATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGYIRRV*KLHILW
Trigger: CCAGAGAATGTGGAGCTTTCAGACTCTCCTTATATA...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTTCCGGCCGGGTTTCCTaGTCTTGGCCACTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSSGRVS*SWPLKV
Trigger: CACTTTAAGTGGCCAAGAGCAGGAAACCCGGCCGGA...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp AAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAAGACAGCACCGTGCCCCCTGTCCTGGGCTCTaGCCCTTCCAGATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KGPNLTRTHSLSRRQHRAPCPGL*PFQIGL
Trigger: CAGCCCTATCTGGAAGGGGCAGAGCCCAGGACAGGG...GGCACGGTGCTGTCTTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAGTGATCATGACTCACTaGAACCTCTACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQVIMTH*NLYLLG
Trigger: GCCCAGGAGGTAGAGGTTGCAGTGAGTCATGATCAC...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTACACGCTCACCACGTATaGGCACTCACAGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLHAHHV*ALTATR
Trigger: CCTGGTGGCTGTGAGTGCCCATACGTGGTGAGCGTG...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAACACACACTCCAAGTCTaGGCACAGGCCTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQHTLQV*AQASVH
Trigger: ATGAACAGAGGCCTGTGCCCAGACTTGGAGTGTGTG...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTACAGAGAGAAGGATATaGGTGTTCTCCAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLATERRI*VFSRIA
Trigger: AGCAATTCTGGAGAACACCCATATCCTTCTCTCTGT...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCGTACAAAAACCAGGGTaGTTCCAAGGACCAATCAAA +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGVQKPG*FQGPIK
Trigger: TTTGATTGGTCCTTGGAACCACCCTGGTTTTTGTAC...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTAGGGCCTCACTCTTATaGCCTAACTTAACCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLARASLL*PNLTLV
Trigger: AACTAAGGTTAAGTTAGGCCATAAGAGTGAGGCCCT...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAATTCTATCAGCAGAAGTaGAGAGGGAGCCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQFYQQK*RGSPKL
Trigger: GAGTTTGGGGCTCCCTCTTCACTTCTGCTGATAGAA...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAGCTCATCGCACACCATaGGATGCTTTCCAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQAHRTP*DAFQSR
Trigger: TCTAGACTGGAAAGCATCTCATGGTGTGCGATGAGC...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACAGCCAGTGCCTAGGCTaGACCTATACCGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNSQCLG*TYTASS
Trigger: TGAGGATGCGGTATAGGTTCAGCCTAGGCACTGGCT...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTATGTACTCAGTCCCCATaGTCTTCGCTCCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLCTQSP*SSLLAV
Trigger: GACGGCGAGGAGCGAAGACCATGGGGACTGAGTACA...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCACACACTCCAAGTCTaGGCACAGGCCTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSHTLQV*AQASVH
Trigger: ATGAACAGAGGCCTGTGCCCAGACTTGGAGTGTGTG...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAGTAAGAGACCCACGATaGCTGAAGGCTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQVRDPR*LKAFSQ
Trigger: CTGTGAGAAAGCCTTCAGCCATCGTGGGTCTCTTAC...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGAGGGCCTCACTCTTATaGCCTAACTTAACCTTAGTT +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLRASLL*PNLTLV
Trigger: AACTAAGGTTAAGTTAGGCCATAAGAGTGAGGCCCT...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCGATGGGCAACCTGGCTaGAGGCTTTGCTACATTCCT +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSDGQPG*RLCYIP
Trigger: AGGAATGTAGCAAAGCCTTCAGCCAGGTTGCCCATC...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGCTCCACATTCTCTGGTaGGACTACCCATCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVELHILW*DYPSPS
Trigger: GCTAGGGGATGGGTAGTCTCACCAGAGAATGTGGAG...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTCACGCCGCCGGGCCATaGACGCAGGCGCAGATTCGC +
Preference number: 4 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIHAAGP*TQAQIR
Trigger: GCGAATCTGCGCCTGCGTGCATGGCCCGGCGGCGTG...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp CATGAGCAAGACAGAAGGGGCGAAATGTGCCACACATTTTTAAAGGACCTAATCAGGGCTGACAGGAAATaGTTCAGCCGAGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HEQDRRGEMCHTFLKDLIRADRK*FSRGCP
Trigger: GGGGCAGCCTCGGCTGAAGCATTTCCTGTCAGCCCT...GATTAGGTCCTTTAAAAATGTGTGGCACATTTCGCCCCTTCTGTCTTGCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGCCAGCATTTGGTGGTaGTGGGCACAGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHASIWW*WAQASV
Trigger: AACAGAGGCCTGTGCCCAGCACCACCAAATGCTGGC...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594953.1
CDS-3UTR GCA 90 bp CCGCATCCTCAGGACCAACAGCCCAGGGTAAGAGTCCAGCTGGTACTTACCTGTAGAAGGGGCGAAATGTaGCACACATTTTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PHPQDQQPRVRVQLVLTCRRGEM*HTFLKD
Trigger: GTCCTTTAAAAATGTGTGGCACATTTCGCCCCTTCT...ACAGGTAAGTACCAGCTGGACTCTTACCCTGGGCTGTTGGTCCTGAGGATGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCCACACGAATTGTCTGTaGTACTTTTATAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGHTNCL*YFYKGQ
Trigger: TTGGCCTTTATAAAAGTACCACAGACAATTCGTGTG...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCACGGCTTCCCTCACATaGCCCTCTATACTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSTASLT*PSILPQ
Trigger: CTGTGGAAGTATAGAGGGCCATGTGAGGGAAGCCGT...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGGTAGAGGCCAGCATTTaGTGGTGCTGGTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: DGSILVVSLHSISSVHMWVEASI*WCWWEH
Trigger: GTGTTCCCACCAGCACCACCAAATGCTGGCCTCTAC...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTACTACATGACAGCCAGTaGCTCTGGAGTCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLLHDSQ*LWSQPV
Trigger: AACAGGCTGACTCCAGAGTCACTGGCTGTCATGTAG...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR TCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTGGTGTGCAAGCTGGCTaGATGCTTTATTACACTGCT +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSGVQAG*MLYYTA
Trigger: AGCAGTGTAATAAAGCATTCAGCCAGCTTGCACACC...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAGATGGGCAACCTGGCTaGAGGCTTTGCTACATTCCT +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVEDGQPG*RLCYIP
Trigger: AGGAATGTAGCAAAGCCTTCAGCCAGGTTGCCCATC...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCTTCTATCAGCAGAAGTaGAGAGGGAGCCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSFYQQK*RGSPKL
Trigger: GAGTTTGGGGCTCCCTCTTCACTTCTGCTGATAGAA...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp CTGTACAGCAAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAAATCATGGCAAAAGGTaGAAGGGGAGCCGCACATCA +
Preference number: 4 (lower is better)
Translates to: LYSKHDIGICLTSGEATGNHGKR*KGSRTS
Trigger: TGATGTGCGGCTCCCCTTTCACCTTTTGCCATGATT...TCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTTGCTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGTTGGCTTGTTACTTTTaGTTTACTACTACCTACCCT +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLLACYF*FTTTYP
Trigger: AGGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAA...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTCTCATGGAACAAGATaGAAGGTCTTATTGCATTTT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLASHGTR*KVLLHF
Trigger: AAAATGCAATAAGACCTTCCATCTTGTTCCATGAGA...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTGCATCTTTTGTGAATaGGACATTAGTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGCIFCE*DISPFF
Trigger: GAAAAATGGACTAATGTCCCATTCACAAAAGATGCA...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCATTACATATACCTTTTaGATTCAGCATTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGITYTF*IQHSPS
Trigger: GGATGGAGAATGCTGAATCCAAAAGGTATATGTAAT...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTATTTTCTCACAGTCCTaGAGATTAAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLAIFSQS*RLKVQD
Trigger: ATCTTGGACTTTTAATCTCCAGGACTGTGAGAAAAT...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAATATATAAGGAGAGTCTaGAAGCTCCACATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQYIRRV*KLHILW
Trigger: CCAGAGAATGTGGAGCTTTCAGACTCTCCTTATATA...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGGCTCATCGCACACCATaGGATGCTTTCCAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: DGSILVVSLHSISSVHMWAHRTP*DAFQSR
Trigger: TCTAGACTGGAAAGCATCTCATGGTGTGCGATGAGC...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CCGCATCCTCAGGACCAACAGCCCAGGGTAAGAGTCCAGCTGGTACTTACCTGTTACTTATCCTCTCTATaGTTCTGTGTCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PHPQDQQPRVRVQLVLTCYLSSL*FCVFIC
Trigger: ACAGATGAAGACACAGAAGCATAGAGAGGATAAGTA...ACAGGTAAGTACCAGCTGGACTCTTACCCTGGGCTGTTGGTCCTGAGGATGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTACAGCATTTCCTCTGTaGACATGTGGAGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSTAFPL*TCGETN
Trigger: GTTTGTCTCTCCACATGTGCACAGAGGAAATGCTGT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR GCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTCTCTCCTCCTGGCTTaGAGATGGCAGCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVESLLLA*RWQHSC
Trigger: ACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR GCA 90 bp AAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTTACAACATGACATTGGCATTTaGTTGACTTCTGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KHDIGICLTSGEATGGLQHDIGI*LTSGEA
Trigger: GGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATG...TTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTACCTCTACCTCTTCCTaGCTCTTCATTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSTSTSS*LFIWRR
Trigger: TCTTCTCCAAATGAAGAGCCAGGAAGAGGTAGAGGT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGATCTATAGGACTTGGTaGTATGGGAGGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DGSILVVSLHSISSVHMWIYRTW*YGRAEE
Trigger: CTCCTCTGCCCTCCCATACCACCAAGTCCTATAGAT...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGTCTCATGGAACAAGATaGAAGGTCTTATTGCATTTT +
Preference number: 4 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLSHGTR*KVLLHF
Trigger: AAAATGCAATAAGACCTTCCATCTTGTTCCATGAGA...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAATCCTCTGTGCACATGTaGAGAGACAAACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVESSVHM*RDKPLV
Trigger: CACCAGAGGTTTGTCTCTCCACATGTGCACAGAGGA...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAAGCATTTGGTGGTGCTaGGCACAGGCCTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTSIWWC*AQASVH
Trigger: ATGAACAGAGGCCTGTGCCCAGCACCACCAAATGCT...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594953.1
3UTR CAA 72 bp CAGTCATGTTGGGGTTTAGGACTTCAACAAGTAAATTaGGTGGTGGTAGAGGCCAGCATTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSCWGLGLQQVN*VVVEASIWWCW
Trigger: CCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAGTCCTAAACCCCAACATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCAGTGTCAGGTAAAGTaGGAGTTGCTCATCAACAAT +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSQCQVK*ELLINN
Trigger: ATTGTTGATGAGCAACTCTCACTTTACCTGACACTG...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTAGACAATGGGTAGTTTaGGGAATCACAGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSRQWVV*GITDLE
Trigger: TTCCAAGTCTGTGATTCCTCAAACTACCCATTGTCT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAACAACAGTTATGCTACTaGAGAAATCCAGATGAGATG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQQQLCY*RNPDEM
Trigger: CATCTCATCTGGATTTCTGCAGTAGCATAACTGTTG...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAGATTGTTTCTTTACTTaGAAGCAACTGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQDCFFT*KQLTNR
Trigger: CCTGTTGGTCAGTTGCTTGCAAGTAAAGAAACAATC...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACACCTCTACCTCTTCCTaGCTCTTCATTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNTSTSS*LFIWRR
Trigger: TCTTCTCCAAATGAAGAGCCAGGAAGAGGTAGAGGT...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp AAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTTACAACCCCATCTCCAGCACTaGGGATTACAATCTAACATG +
Preference number: 4 (lower is better)
Translates to: KHDIGICLTSGEATGGLQPHLQH*GLQSNM
Trigger: CATGTTAGATTGTAATCCCCAGTGCTGGAGATGGGG...TTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTAGAGCCGCACATCACATaGCAAAAACACATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLEPHIT*QKHMSK
Trigger: CTTGCTCATGTGTTTTTGCCATGTGATGTGCGGCTC...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTAGGAGGCTTACAATCATaGCAAAAGGTGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLGGLQS*QKVKGE
Trigger: CTCCCCTTTCACCTTTTGCCATGATTGTAAGCCTCC...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR TCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAATGTACTGTCAGAGATaGGCCATGGCTAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVEMYCQR*AMAKSL
Trigger: AAGGCTTTTAGCCATGGCTCATCTCTGACAGTACAT...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATCCTCTTCACTTCTGCTaGTGGATACAGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHPLHFC*WIQREG
Trigger: TCCTTCTCTCTGTATCCATCAGCAGAAGTGAAGAGG...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGGGCTGGTTCCTGGTaGGGTCTCTCCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIRAGSW*GLSSWL
Trigger: AAGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGATGACAAATCAAGGATaGCCTCTGCCTGAATGCCTT +
Preference number: 4 (lower is better)
Translates to: DGSILVVSLHSISSVHMWMTNQG*PLPECL
Trigger: AAGGCATTCAGGCAGAGGGCATCCTTGATTTGTCAT...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp GGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCTAATTGGCTCACAGTTCTaGAGGCTGTACAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GQISKLFQGVEPVPRLNLIGSQF*RLYSKH
Trigger: ATGTTTGCTGTACAGCCTGCAGAACTGTGAGCCAAT...TAGGTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAATGTACTCAGTCCCCATaGTCTTCGCTCCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQCTQSP*SSLLAV
Trigger: GACGGCGAGGAGCGAAGACCATGGGGACTGAGTACA...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGACCTCTACCTCTTCCTaGCTCTTCATTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DGSILVVSLHSISSVHMWTSTSS*LFIWRR
Trigger: TCTTCTCCAAATGAAGAGCCAGGAAGAGGTAGAGGT...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAAGCATTTGGTGGTGCTaGTGGGAACACAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVESIWWC*WEHNSE
Trigger: TTCTGAATTGTGTTCCCACCAGCACCACCAAATGCT...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGAGCATTTGGTGGTGCTaGTGGGAACACAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVESIWWC*WEHNSE
Trigger: TTCTGAATTGTGTTCCCACCAGCACCACCAAATGCT...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATAGAAGAGCTTTACTCTaGGATTGTAGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHRRALL*DCRAGE
Trigger: CTCCCCAGCTCTACAATCCCAGAGTAAAGCTCTTCT...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391709.4
CDS-3UTR TCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTTACTTGCAAGCAACTaGCCAACAGGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVELLASN*PTGGKN
Trigger: ATTTTTGCCTCCTGTTGGTCAGTTGCTTGCAAGTAA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAACTTGGCCACTTAAAGTaGTTCACTCATTCCAACACA +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVELGHLK*FTHSNT
Trigger: TGTGTTGGAATGAGTGAAGCACTTTAAGTGGCCAAG...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp GGCTTACAATCATGGCAAAAGGTGAAAGGGGAGCCGCACATCACATGGCAAAAACTTGGCCACTTAAAGTaGTTCACTCATTCCAACACA +
Preference number: 4 (lower is better)
Translates to: GLQSWQKVKGEPHITWQKLGHLK*FTHSNT
Trigger: TGTGTTGGAATGAGTGAAGCACTTTAAGTGGCCAAG...TTTTTGCCATGTGATGTGCGGCTCCCCTTTCACCTTTTGCCATGATTGTAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp AAACATGACATTGGCATTTGCTTGACTTCTGGGGAGGCCACAGGAGGCTTACAAACAAAGTTTAATTCCTaGCACCTCTACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KHDIGICLTSGEATGGLQTKFNS*HLYLFL
Trigger: CAGGAAGAGGTAGAGGTGGCAGGAATTAAACTTTGT...TTGTAAGCCTCCTGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCGATGAGCCAGATGCGTaGTCTGCCGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFDEPDA*SAGKLS
Trigger: GGAAAGCTTTCCGGCAGAGCACGCATCTGGCTCATC...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGGATGAGCCAGATGCGTaGTCTGCCGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRDEPDA*SAGKLS
Trigger: GGAAAGCTTTCCGGCAGAGCACGCATCTGGCTCATC...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATACAGCATTTCCTCTGTaGACATGTGGAGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHTAFPL*TCGETN
Trigger: GTTTGTCTCTCCACATGTGCACAGAGGAAATGCTGT...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR CCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCGGACTTTGCCCACACTaGGCTCTACGCAGTCGATAC +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFGLCPH*ALRSRY
Trigger: GTATCGACTGCGTAGAGCCCAGTGTGGGCAAAGTCC...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAACAGAGAGAAGGATATaGGTGTTCTCCAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVETERRI*VFSRIA
Trigger: AGCAATTCTGGAGAACACCCATATCCTTCTCTCTGT...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAATGCATCTTTTGTGAATaGGACATTAGTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQCIFCE*DISPFF
Trigger: GAAAAATGGACTAATGTCCCATTCACAAAAGATGCA...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAATTTTCTCACAGTCCTaGAGATTAAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQIFSQS*RLKVQD
Trigger: ATCTTGGACTTTTAATCTCCAGGACTGTGAGAAAAT...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACACAGTGTCAGGTAAAGTaGGAGTTGCTCATCAACAAT +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTQCQVK*ELLINN
Trigger: ATTGTTGATGAGCAACTCTCACTTTACCTGACACTG...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAAGCCTTGGGACTATCATaGCTATTTTCATTATGCCTT +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVEALGLS*LFSLCL
Trigger: AAGGCATAATGAAAATAGTCATGATAGTCCCAAGGC...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAAGACAATGGGTAGTTTaGGGAATCACAGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTRQWVV*GITDLE
Trigger: TTCCAAGTCTGTGATTCCTCAAACTACCCATTGTCT...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GGCTTACAATCATGGCAAAAGGTGAAAGGGGAGCCGCACATCACATGGCAAAAACACTTTCTGGAAGTCTaGGATAATTGGCAACGTTTT +
Preference number: 4 (lower is better)
Translates to: GLQSWQKVKGEPHITWQKHFLEV*DNWQRF
Trigger: AAAACGTTGCCAATTATCTCAGACTTCCAGAAAGTG...TTTTTGCCATGTGATGTGCGGCTCCCCTTTCACCTTTTGCCATGATTGTAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAACAAAGTTTAATTCCTaGCACCTCTACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTTKFNS*HLYLFL
Trigger: CAGGAAGAGGTAGAGGTGGCAGGAATTAAACTTTGT...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAGTGATCATGACTCACTaGAACCTCTACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQVIMTH*NLYLLG
Trigger: GCCCAGGAGGTAGAGGTTGCAGTGAGTCATGATCAC...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCTTAAAGATAATGATTTaGTCACCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSLKIMI*SPTHTP
Trigger: TGGAGTGTGTGTGGGTGACCAAATCATTATCTTTAA...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAAGGGCCTCACTCTTATaGCCTAACTTAACCTTAGTT +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTRASLL*PNLTLV
Trigger: AACTAAGGTTAAGTTAGGCCATAAGAGTGAGGCCCT...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS-3UTR TCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTCTACATGACAGCCAGTaGCTCTGGAGTCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISLHDSQ*LWSQPV
Trigger: AACAGGCTGACTCCAGAGTCACTGGCTGTCATGTAG...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR TCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGATAAGAGTATCTATATaGGTGATGGTCTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVEIRVSI*VMVSCL
Trigger: TAGGCAAGAGACCATCACTCATATAGATACTCTTAT...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAGCCTTGGGACTATCATaGCTATTTTCATTATGCCTT +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTALGLS*LFSLCL
Trigger: AAGGCATAATGAAAATAGTCATGATAGTCCCAAGGC...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAAGACAGCACCCATGGCAAAAACACATaGGCAAGACAGAAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: FLKDLISQELTHYREDSTHGKNT*ARQKGR
Trigger: TCGCCCCTTCTGTCTTGCTCATGTGTTTTTGCCATG...GGTGCTGTCTTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAGGTGTTCTCCAGAATTaGTTTGTCTCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTGVLQN*FVSIKL
Trigger: CAGCTTTATTGAGACAAAGCAATTCTGGAGAACACC...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TTGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACAGATTGTTTCTTTACTTaGAAGCAACTGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: LQMAAFLLCPYTAFPLCTDCFFT*KQLTNR
Trigger: CCTGTTGGTCAGTTGCTTGCAAGTAAAGAAACAATC...TGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGTCTCTCCTCCTGGCTTaGAGATGGCAGCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRSLLLA*RWQHSC
Trigger: ACAAGAATGCTGCCATCTGCAAGCCAGGAGGAGAGA...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCCGGGTTTCCTGCTCTTaGCCACTTAAAGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFRVSCS*PLKVLH
Trigger: GTGAAGCACTTTAAGTGGCCAAGAGCAGGAAACCCG...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAATTAAAGATAATGATTTaGTCACCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVELKIMI*SPTHTP
Trigger: TGGAGTGTGTGTGGGTGACCAAATCATTATCTTTAA...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAGTAAGAGACCCACGATaGCTGAAGGCTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQVRDPR*LKAFSQ
Trigger: CTGTGAGAAAGCCTTCAGCCATCGTGGGTCTCTTAC...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGATCTATAGGACTTGGTaGTATGGGAGGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRIYRTW*YGRAEE
Trigger: CTCCTCTGCCCTCCCATACCACCAAGTCCTATAGAT...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TTCCACAGAAAGCAGTTAAGAGGGAACCCAAGAGCTCTGGGTGCTTCAGTTGAATTGGCTTGTTACTTTTaGTTTACTACTACCTACCCT +
Preference number: 4 (lower is better)
Translates to: FHRKQLRGNPRALGASVELACYF*FTTTYP
Trigger: AGGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAA...TTCAACTGAAGCACCCAGAGCTCTTGGGTTCCCTCTTAACTGCTTTCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTTAGCAATAACTATATaGCAGTGTGTGCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVELAITI*QCVLNP
Trigger: AGGATTTAGCACACACTGGCATATAGTTATTGCTAA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAACGGGTTTCCTGCTCTTaGCCACTTAAAGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CHTFLKDLISQELTHYRERVSCS*PLKVLH
Trigger: GTGAAGCACTTTAAGTGGCCAAGAGCAGGAAACCCG...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR TCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCATGTACTGTCAGAGATaGGCCATGGCTAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFMYCQR*AMAKSL
Trigger: AAGGCTTTTAGCCATGGCTCATCTCTGACAGTACAT...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGTTTCCCAATGCCATTTaGTCAAACCACCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRFPNAI*SNHLFP
Trigger: GGGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAA...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAAGCTGTACAGCAAACATaGCATTGGCATTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CHTFLKDLISQELTHYREAVQQT*HWHLLD
Trigger: GTCAAGCAAATGCCAATGTCATGTTTGCTGTACAGC...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR GCA 90 bp GTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATGACAAAGTTTAATTCCTaGCACCTCTACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VTFGLLLPTLVSPTFYQMTKFNS*HLYLFL
Trigger: CAGGAAGAGGTAGAGGTGGCAGGAATTAAACTTTGT...CATTTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGGTACAAAAACCAGGGTaGTTCCAAGGACCAATCAAA +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRVQKPG*FQGPIK
Trigger: TTTGATTGGTCCTTGGAACCACCCTGGTTTTTGTAC...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAACATTTTCAGGATATCTaGGCACAGGCCTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CHTFLKDLISQELTHYREHFQDI*AQASVH
Trigger: ATGAACAGAGGCCTGTGCCCAGATATCCTGAAAATG...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR TCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCCAAGGGATTCCTCTTTaGGGTGATGAAAATGTTCTA +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFQGIPL*GDENVL
Trigger: TAGAACATTTTCATCACCTCAAAGAGGAATCCCTTG...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTTTACTTGCAAGCAACTaGCCAACAGGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISLLASN*PTGGKN
Trigger: ATTTTTGCCTCCTGTTGGTCAGTTGCTTGCAAGTAA...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp GTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATGTGCAAGCTGGCTGAATaGTTTATTACACTGCTTACA +
Preference number: 4 (lower is better)
Translates to: VTFGLLLPTLVSPTFYQMCKLAE*FITLLT
Trigger: TGTAAGCAGTGTAATAAAGCATTCAGCCAGCTTGCA...CATTTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CAA 72 bp AATGTCACAGAGGGAGTGATAAGCCACCATGTTACCTaGTGTACCATAAATCTTTCAATTCTGAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: NVTEGVISHHVT*CTINLSILSLF
Trigger: GAACAAACTCAGAATTGAAAGATTTATGGTACACAAGGTAACATGGTGGCTTATCACTCCCTCTGTGACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTCAAGGGATTCCTCTTTaGGGTGATGAAAATGTTCTA +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISQGIPL*GDENVL
Trigger: TAGAACATTTTCATCACCTCAAAGAGGAATCCCTTG...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCTACTTATCCTCTCTATaGTTCTGTGTCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFYLSSL*FCVFIC
Trigger: ACAGATGAAGACACAGAAGCATAGAGAGGATAAGTA...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR GCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTTGCAAGCTGGCTGAATaGTTTATTACACTGCTTACA +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISCKLAE*FITLLT
Trigger: TGTAAGCAGTGTAATAAAGCATTCAGCCAGCTTGCA...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGCACACGAATTGTCTGTaGTACTTTTATAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRHTNCL*YFYKGQ
Trigger: TTGGCCTTTATAAAAGTACCACAGACAATTCGTGTG...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR TCA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTATAAGAGTATCTATATaGGTGATGGTCTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIIRVSI*VMVSCL
Trigger: TAGGCAAGAGACCATCACTCATATAGATACTCTTAT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAATCCCCACTCTCAACATaGATTCTCTATTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CHTFLKDLISQELTHYRESPLST*ILYFFL
Trigger: AAGAAAGAAATAGAGAATGCATGTTGAGAGTGGGGA...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CCA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATTACATATACCTTTTaGATTCAGCATTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQITYTF*IQHSPS
Trigger: GGATGGAGAATGCTGAATCCAAAAGGTATATGTAAT...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR GCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTTTAGCAATAACTATATaGCAGTGTGTGCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISLAITI*QCVLNP
Trigger: AGGATTTAGCACACACTGGCATATAGTTATTGCTAA...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CCA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTATTTTCTCACAGTCCTaGAGATTAAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EFPCFHTFTNTECYHSISIFSQS*RLKVQD
Trigger: ATCTTGGACTTTTAATCTCCAGGACTGTGAGAAAAT...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
3UTR CAA 72 bp CGAATTGTCTGTGGTACTTTTATAAAGGCCAAAGTATaGAACTACCCTTTTCAGTGTTTCATGGCTATTAAT +
Preference number: 4 (lower is better)
Translates to: RIVCGTFIKAKV*NYPFQCFMAIN
Trigger: ATTAATAGCCATGAAACACTGAAAAGGGTAGTTCAATACTTTGGCCTTTATAAAAGTACCACAGACAATTCG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS CCA 90 bp GCGCGCTCGCCCCTCCTCAGCACAGCACCGCACGCTCACCACGTATaGGCACTCACAGCCACCAGGCCACACGCGCACGCTCACGCCCGC +
Preference number: 5 (lower is better)
Translates to: ARSPLLSTAPHAHHV*ALTATRPHAHAHAR
Trigger: GCGGGCGTGAGCGTGCGCGTGTGGCCTGGTGGCTGTGAGTGCCCATACGTGGTGAGCGTGCGGTGCTGTGCTGAGGAGGGGCGAGCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000601902.5
CDS GCA 90 bp TTCACTCATTCCAACACACACCGCCTTCCGCACGCCGCCGGGCCATaGACGCAGGCGCAGATTCGCGGCCACGCACCGGACAGTCACACA +
Preference number: 5 (lower is better)
Translates to: FTHSNTHRLPHAAGP*TQAQIRGHAPDSHT
Trigger: TGTGTGACTGTCCGGTGCGTGGCCGCGAATCTGCGCCTGCGTGCATGGCCCGGCGGCGTGCGGAAGGCGGTGTGTGTTGGAATGAGTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 90 bp CTGCCCCTTCCAGATAGGGCTGACAGGAAATGCTTCAGCCGAGGCTaGCCCGCCCGGGCAACTTCCCCGGGCTCTAGGACTTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: LPLPDRADRKCFSRG*PARATSPGSRTLPT
Trigger: TGTGGGCAAAGTCCTAGAGCCCGGGGAAGTTGCCCGGGCGGGGCAGCCTCGGCTGAAGCATTTCCTGTCAGCCCTATCTGGAAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 90 bp GGTAAGCCTCCTCCGGCCGGGTTTCCTGCTCTTGGCCACTTAAAGTaGTTCACTCATTCCAACACACACCGCCTTCCGCACGCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: GKPPPAGFPALGHLK*FTHSNTHRLPHAAG
Trigger: CCCGGCGGCGTGCGGAAGGCGGTGTGTGTTGGAATGAGTGAAGCACTTTAAGTGGCCAAGAGCAGGAAACCCGGCCGGAGGAGGCTTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 90 bp TTCGCTCCTCGCCGTCCTGTGGACATGGAGCCCTGTCCTGGGCTCTaGCCCTTCCAGATAGGGCTGACAGGAAATGCTTCAGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: FAPRRPVDMEPCPGL*PFQIGLTGNASAEA
Trigger: AGCCTCGGCTGAAGCATTTCCTGTCAGCCCTATCTGGAAGGGGCAGAGCCCAGGACAGGGCTCCATGTCCACAGGACGGCGAGGAGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS CCA 90 bp ATCCTCTCTATGCTTCTGTGTCTTCATCTGTGTACTCAGTCCCCATaGTCTTCGCTCCTCGCCGTCCTGTGGACATGGAGCCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: ILSMLLCLHLCTQSP*SSLLAVLWTWSPVL
Trigger: CAGGACAGGGCTCCATGTCCACAGGACGGCGAGGAGCGAAGACCATGGGGACTGAGTACACAGATGAAGACACAGAAGCATAGAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS-3UTR CAA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCCCGGGCTCTAGGACTTaGCCCACACTGGGCTCTACG +
Preference number: 5 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSPGSRT*PTLGST
Trigger: CGTAGAGCCCAGTGTGGGCAAAGTCCTAGAGCCCGG...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CAA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACCCGGGCTCTAGGACTTaGCCCACACTGGGCTCTACG +
Preference number: 5 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNPGSRT*PTLGST
Trigger: CGTAGAGCCCAGTGTGGGCAAAGTCCTAGAGCCCGG...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CAA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTAGCCTAATGTCAGCTTaGGGGTTATGCATTAGTGCT +
Preference number: 5 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLASLMSA*GLCISA
Trigger: AGCACTAATGCATAACCCCAAAGCTGACATTAGGCT...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGGGTAGAGGCCAGCATTaGGTGGTGCTGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: DGSILVVSLHSISSVHMWGRGQH*VVLGTG
Trigger: GCCTGTGCCCAGCACCACCAAATGCTGGCCTCTACC...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594953.1
CDS-3UTR CAA 90 bp CCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTGGGTGTTCTCCAGAATaGCTTTGTCTCAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: PRSRCWQGWFLVRSLLLAGCSPE*LCLNKA
Trigger: AGCTTTATTGAGACAAAGCAATTCTGGAGAACACCC...AGCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGTTTCCCAATGCCATTaGATCAAACCACCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLVSQCH*IKPPFP
Trigger: GGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAAC...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTTTAAAGATAATGATTaGGTCACCCACACACACTCC +
Preference number: 5 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGFKDND*VTHTHS
Trigger: GGAGTGTGTGTGGGTGACCAAATCATTATCTTTAAA...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCAACAATGGAATTCCCTaGTTTCCACACATTCACCAA +
Preference number: 5 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGNNGIP*FPHIHQ
Trigger: TTGGTGAATGTGTGGAAACAAGGGAATTCCATTGTT...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGGCTCAGAGACAATTTTATaGGCCACGTCCATCAAAAAC +
Preference number: 5 (lower is better)
Translates to: SKIKVLAGLVPGEVSPPGSETIL*ATSIKN
Trigger: GTTTTTGATGGACGTGGCCAATAAAATTGTCTCTGA...GCCAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CAGGACCAACAGCCCAGGGTAAGAGTCCAGCTGGTACTTACCTGTCCCCACTCTAAGCTCCCGTTCTTCTaGTTCAACTTACTGATGTGG +
Preference number: 5 (lower is better)
Translates to: QDQQPRVRVQLVLTCPHSKLPFF*FNLLMW
Trigger: CCACATCAGTAAGTTGAACAAGAAGAACGGGAGCTT...AGAGTGGGGACAGGTAAGTACCAGCTGGACTCTTACCCTGGGCTGTTGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CAA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGTTTGGCTTGTTACTTTaGGTTTACTACTACCTACCC +
Preference number: 5 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLFGLLL*VYYYLP
Trigger: GGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAAA...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAACTTCAACAAGTAAATTaGGTGGTGGTAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQLQQVN*VVVEAS
Trigger: GCTGGCCTCTACCACCACCAAATTTACTTGTTGAAG...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CAGGGACAAATATCCAAACTATTTCAAGGGGTGGAGCCAGTGCCTAGGCTGAACGACATTGGCATTTGCTaGACTTCTGGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: QGQISKLFQGVEPVPRLNDIGIC*TSGEAT
Trigger: TGTGGCCTCCCCAGAAGTCAAGCAAATGCCAATGTC...GTTCAGCCTAGGCACTGGCTCCACCCCTTGAAATAGTTTGGATATTTGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CAA 90 bp AGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTCTCCTCCTGCTTTCAATTCTGAGTTaGTTCATCTTTCCTCTCTAC +
Preference number: 5 (lower is better)
Translates to: SPRSRCWQGWFLVRSLLLLSILS*FIFPLY
Trigger: GTAGAGAGGAAAGATGAACAAACTCAGAATTGAAAG...CAGGAGGAGAGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTACTTTAAGTGGAACTTaGGGGCTCCCTCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSTLSGT*GLPLHF
Trigger: GAAGTGAAGAGGGAGCCCCAAAGTTCCACTTAAAGT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS TCA 90 bp TTACTCTGGGATTGTAGAGCTGAGGCAGTAGTTGAGGAAACTACATaGCAGCCAGTGACTCTGGAGTCAGCCTGTTCTGGATCTGAATCC +
Preference number: 5 (lower is better)
Translates to: LLWDCRAEAVVEETT*QPVTLESACSGSES
Trigger: GGATTCAGATCCAGAACAGGCTGACTCCAGAGTCACTGGCTGTCATGTAGTTTCCTCAACTACTGCCTCAGCTCTACAATCCCAGAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 90 bp CTTTTGCTTCTTTCACATTTTCTCTTGCCGCCACCATGTAAGAAGTaGCTTTCACCTCCCACCATGATTCTGAGGTCTCCTCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: LLLLSHFLLPPPCKK*LSPPTMILRSPQPC
Trigger: ACATGGCTGAGGAGACCTCAGAATCATGGTGGGAGGTGAAAGGCACTTCTTACATGGTGGCGGCAAGAGAAAATGTGAAAGAAGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS-3UTR CAA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTATGAGTGATGGTCTCTaGCCTAAAATGTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSMSDGL*PKMCLL
Trigger: CAGAAGACACATTTTAGGCAAGAGACCATCACTCAT...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTTTTAGGGAGTTGCCATaGGATGACACAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSFRELP*DDTDPN
Trigger: ATTTGGATCTGTGTCATCCAATGGCAACTCCCTAAA...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGCTTCAACAAGTAAATTaGGTGGTGGTAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVELQQVN*VVVEAS
Trigger: GCTGGCCTCTACCACCACCAAATTTACTTGTTGAAG...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000391709.4
ENST00000594953.1
CDS TCA 90 bp CAGTGTGAAGGCCACATTGGGTGGGTGGTGGGAGTTTTTCCACCGTaGTCTAGAAATGTCAATTCCTTCAACTTAACAGATGGCTCCTAT +
Preference number: 5 (lower is better)
Translates to: QCEGHIGWVVGVFPP*SRNVNSFNLTDGSY
Trigger: ATAGGAGCCATCTGTTAAGTTGAAGGAATTGACATTTCTAGATCACGGTGGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTCCCGGTTCTTCCACTaGCTAGTGATTACTTATCCT +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVESRFFH*LVITYP
Trigger: AGGATAAGTAATCACTAGCAAGTGGAAGAACCGGGA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330619.13
CDS-3UTR CAA 90 bp TCTGGCTCTGCTGCCCAGCTGGAATTGCAGTGGTGTGATCATGACTCACTGCAAAGTTTTTCCCTAATGTaGAACATTCAAGGTCATAGC +
Preference number: 5 (lower is better)
Translates to: SGSAAQLELQWCDHDSLQSFSLM*NIQGHS
Trigger: GCTATGACCTTGAATGTTCAACATTAGGGAAAAACT...TTGCAGTGAGTCATGATCACACCACTGCAATTCCAGCTGGGCAGCAGAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTCAGCTTTTAGGGAGTaGCCATTGGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVESAFRE*PLDDTD
Trigger: ATCTGTGTCATCCAATGGCAACTCCCTAAAAGCTGA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCAAGACAATGGGTAGTTaGAGGAATCACAGACTTGGA +
Preference number: 5 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSKTMGS*RNHRLG
Trigger: TCCAAGTCTGTGATTCCTCAAACTACCCATTGTCTT...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS CCA 90 bp AAGGAACACAACAAACATGTCAGTGTGAAGGCCACATTGGGTGGGTaGTGGGAGTTTTTCCACCGTGATCTAGAAATGTCAATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: KEHNKHVSVKATLGG*WEFFHRDLEMSIPS
Trigger: TGAAGGAATTGACATTTCTAGATCACGGTGGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTGACATGTTTGTTGTGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGATGAGTGATGGTCTCTaGCCTAAAATGTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVEMSDGL*PKMCLL
Trigger: CAGAAGACACATTTTAGGCAAGAGACCATCACTCAT...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GAGATTAAAAGTCCAAGATCAAGGTGCTGGCAGGGCTGGTTCCTGGTGAGGTCTGTAAGGGTTGAGATTTaGCTGAATATTTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: EIKSPRSRCWQGWFLVRSVRVEI*LNIFSQ
Trigger: CTGTGAGAAAATATTCAGCAAAATCTCAACCCTTAC...AGACCTCACCAGGAACCAGCCCTGCCAGCACCTTGATCTTGGACTTTTAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGTTTAGGGAGTTGCCATaGGATGACACAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVEFRELP*DDTDPN
Trigger: ATTTGGATCTGTGTCATCCAATGGCAACTCCCTAAA...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGATGTTTTGGCATGTCTaGTCAATCTCATGGAACAAG +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVEMFWHV*SISWNK
Trigger: CTTGTTCCATGAGATTGACAAGACATGCCAAAACAT...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CTAATACCAACATGTTCTGGGGATAGTAAGGTGCCTGATCCAGCACTCCCTAGCTTTTCATTATGCCTTTaGTGTCTCACAGTTACCTCT +
Preference number: 5 (lower is better)
Translates to: LIPTCSGDSKVPDPALPSFSLCL*CLTVTS
Trigger: AGAGGTAACTGTGAGACACAAAAGGCATAATGAAAA...GCTAGGGAGTGCTGGATCAGGCACCTTACTATCCCCAGAACATGTTGGTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATTTTAAAGATAATGATTaGGTCACCCACACACACTCC +
Preference number: 5 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHFKDND*VTHTHS
Trigger: GGAGTGTGTGTGGGTGACCAAATCATTATCTTTAAA...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGGTAAGGGTTGAGATTTaGCTGAATATTTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: DGSILVVSLHSISSVHMWVRVEI*LNIFSQ
Trigger: CTGTGAGAAAATATTCAGCAAAATCTCAACCCTTAC...CCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGCTTTCAATTCTGAGTTaGTTCATCTTTCCTCTCTAC +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVELSILS*FIFPLY
Trigger: GTAGAGAGGAAAGATGAACAAACTCAGAATTGAAAG...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATTTTGGCTTGTTACTTTaGGTTTACTACTACCTACCC +
Preference number: 5 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHFGLLL*VYYYLP
Trigger: GGGTAGGTAGTAGTAAACCAAAAGTAACAAGCCAAA...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATGTGGAGATAAAGGCCAAAGTATaGAACTACCCTTTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: WQHSCCVLTQHFLCAHVEIKAKV*NYPFQC
Trigger: ACACTGAAAAGGGTAGTTCAATACTTTGGCCTTTAT...CTCCACATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATATGTTTTGGCATGTCTaGTCAATCTCATGGAACAAG +
Preference number: 5 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHMFWHV*SISWNK
Trigger: CTTGTTCCATGAGATTGACAAGACATGCCAAAACAT...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS TCA 90 bp ATCTGGTGGGGCAGTTTGGTGTCATTCCCATTTCAATTAGTCTTTTaGTCAGAGATGCTCCTTCAGTTACAACCTCTCTACATAGCATTC +
Preference number: 5 (lower is better)
Translates to: IWWGSLVSFPFQLVF*SEMLLQLQPLYIAF
Trigger: GAATGCTATGTAGAGAGGTTGTAACTGAAGGAGCATCTCTGATCAAAAGACTAATTGAAATGGGAATGACACCAAACTGCCCCACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601059.1
CDS-3UTR CAA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATATAAAGGCCAAAGTATaGAACTACCCTTTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHIKAKV*NYPFQC
Trigger: ACACTGAAAAGGGTAGTTCAATACTTTGGCCTTTAT...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGCAGATGGCAGCATTCTTGTTGTGTCCTTACACAGCATTTCCTCTGTGCACATTTTTCATTATGCCTTTaGTGTCTCACAGTTACCTCT +
Preference number: 5 (lower is better)
Translates to: CRWQHSCCVLTQHFLCAHFSLCL*CLTVTS
Trigger: AGAGGTAACTGTGAGACACAAAAGGCATAATGAAAA...ATGTGCACAGAGGAAATGCTGTGTAAGGACACAACAAGAATGCTGCCATCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CTTGTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAACTTCAACAAGTAAATTaGGTGGTGGTAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LVTFGLLLPTLVSPTFYQLQQVN*VVVEAS
Trigger: GCTGGCCTCTACCACCACCAAATTTACTTGTTGAAG...TTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp CAACTCCCAATACCTGATTTTTCCAAAGATTCTAATGCCCATTACCCAATCTTCTTCCTGGCTCTTCATTaGGAGAAGAGCTTTACTCTG +
Preference number: 5 (lower is better)
Translates to: QLPIPDFSKDSNAHYPIFFLALH*EKSFTL
Trigger: CAGAGTAAAGCTCTTCTCCAAATGAAGAGCCAGGAA...GAAGATTGGGTAATGGGCATTAGAATCTTTGGAAAAATCAGGTATTGGGAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGTACTTTAAGTGGAACTTaGGGGCTCCCTCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: EFPCFHTFTNTECYHSISTLSGT*GLPLHF
Trigger: GAAGTGAAGAGGGAGCCCCAAAGTTCCACTTAAAGT...ACTAATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGGTTTCCCAATGCCATTaGATCAAACCACCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRVSQCH*IKPPFP
Trigger: GGGAAAAGGTGGTTTGATCAAATGGCATTGGGAAAC...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp TGCCACACATTTTTAAAGGACCTAATCTCACAAGAACTCACTCATTATCGAGAATCCCGGTTCTTCCACTaGCTAGTGATTACTTATCCT +
Preference number: 5 (lower is better)
Translates to: CHTFLKDLISQELTHYRESRFFH*LVITYP
Trigger: AGGATAAGTAATCACTAGCAAGTGGAAGAACCGGGA...TTCTCGATAATGAGTGAGTTCTTGTGAGATTAGGTCCTTTAAAAATGTGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601902.5
CDS-3UTR CAA 90 bp GTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATGGTATTTTTGTCCATCTaGTACCTTACTGTATCCCCC +
Preference number: 5 (lower is better)
Translates to: VTFGLLLPTLVSPTFYQMVFLSI*YLTVSP
Trigger: GGGGGATACAGTAAGGTACAAGATGGACAAAAATAC...CATTTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGGGGTGTTCTCCAGAATaGCTTTGTCTCAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRGCSPE*LCLNKA
Trigger: AGCTTTATTGAGACAAAGCAATTCTGGAGAACACCC...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAGCCTAATGTCAGCTTaGGGGTTATGCATTAGTGCT +
Preference number: 5 (lower is better)
Translates to: MEFPCFHTFTNTECYHSISLMSA*GLCISA
Trigger: AGCACTAATGCATAACCCCAAAGCTGACATTAGGCT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTTCAGCTTTTAGGGAGTaGCCATTGGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: MEFPCFHTFTNTECYHSISAFRE*PLDDTD
Trigger: ATCTGTGTCATCCAATGGCAACTCCCTAAAAGCTGA...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGAACAATGGAATTCCCTaGTTTCCACACATTCACCAA +
Preference number: 5 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRNNGIP*FPHIHQ
Trigger: TTGGTGAATGTGTGGAAACAAGGGAATTCCATTGTT...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp GTTACTTTTGGTTTACTACTACCTACCCTGGTTAGTCCTACATTCTACCAAATGTCAGAGACAATTTTATaGGCCACGTCCATCAAAAAC +
Preference number: 5 (lower is better)
Translates to: VTFGLLLPTLVSPTFYQMSETIL*ATSIKN
Trigger: GTTTTTGATGGACGTGGCCAATAAAATTGTCTCTGA...CATTTGGTAGAATGTAGGACTAACCAGGGTAGGTAGTAGTAAACCAAAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp ATGGAATTCCCTTGTTTCCACACATTCACCAATACTGAATGTTATCACTCGATTAAGACAATGGGTAGTTaGAGGAATCACAGACTTGGA +
Preference number: 5 (lower is better)
Translates to: MEFPCFHTFTNTECYHSIKTMGS*RNHRLG
Trigger: TCCAAGTCTGTGATTCCTCAAACTACCCATTGTCTT...AATCGAGTGATAACATTCAGTATTGGTGAATGTGTGGAAACAAGGGAATTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS-3UTR CAA 90 bp AACCTTAGTTTCTTAAAGGCCTTATGTCCAAATACAGTCATGTTGGGGTTTAGGAGTTTTTCCCTAATGTaGAACATTCAAGGTCATAGC +
Preference number: 5 (lower is better)
Translates to: NLSFLKALCPNTVMLGFRSFSLM*NIQGHS
Trigger: GCTATGACCTTGAATGTTCAACATTAGGGAAAAACT...CCTAAACCCCAACATGACTGTATTTGGACATAAGGCCTTTAAGAAACTAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330619.13
ENST00000391709.4
CDS GCA 72 bp TCCAACACACACCGCCTTCCGCACGCCGCCGGGCCATaGACGCAGGCGCAGATTCGCGGCCACGCACCGGAC +
Preference number: 6 (lower is better)
Translates to: SNTHRLPHAAGP*TQAQIRGHAPD
Trigger: GTCCGGTGCGTGGCCGCGAATCTGCGCCTGCGTGCATGGCCCGGCGGCGTGCGGAAGGCGGTGTGTGTTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 72 bp CCAGATAGGGCTGACAGGAAATGCTTCAGCCGAGGCTaGCCCGCCCGGGCAACTTCCCCGGGCTCTAGGACT +
Preference number: 6 (lower is better)
Translates to: PDRADRKCFSRG*PARATSPGSRT
Trigger: AGTCCTAGAGCCCGGGGAAGTTGCCCGGGCGGGGCAGCCTCGGCTGAAGCATTTCCTGTCAGCCCTATCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS GCA 72 bp CCTCCGGCCGGGTTTCCTGCTCTTGGCCACTTAAAGTaGTTCACTCATTCCAACACACACCGCCTTCCGCAC +
Preference number: 6 (lower is better)
Translates to: PPAGFPALGHLK*FTHSNTHRLPH
Trigger: GTGCGGAAGGCGGTGTGTGTTGGAATGAGTGAAGCACTTTAAGTGGCCAAGAGCAGGAAACCCGGCCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS TCA 72 bp CCCACGTGTTGTGGGAAGGACCCAGAGGGAGGTAACTaGATCATGGGGCATGGTCTTTCCCATGCTATTCTC +
Preference number: 6 (lower is better)
Translates to: PTCCGKDPEGGN*IMGHGLSHAIL
Trigger: GAGAATAGCATGGGAAAGACCATGCCCCATGATTCAGTTACCTCCCTCTGGGTCCTTCCCACAACACGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 72 bp GGTTTGGCTGTGTCCCCAACCAAAGCTCAACTTGAATaGTACCTCCCAGGATTCCCACGTGTTGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GLAVSPTKAQLE*YLPGFPRVVGR
Trigger: CCTTCCCACAACACGTGGGAATCCTGGGAGGTACAATTCAAGTTGAGCTTTGGTTGGGGACACAGCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 90 bp GTCCAAATACAGTCATGTTGGGGTTTAGGACTTCAACAAGTAAATTaGGTGGTGGTAGAGGCCAGCATTTGGTGGTGCTGGGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: VQIQSCWGLGLQQVN*VVVEASIWWCWAQA
Trigger: GGCCTGTGCCCAGCACCACCAAATGCTGGCCTCTACCACCACCAAATTTACTTGTTGAAGTCCTAAACCCCAACATGACTGTATTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594953.1
CDS TCA 72 bp GATTGTAGAGCTGAGGCAGTAGTTGAGGAAACTACATaGCAGCCAGTGACTCTGGAGTCAGCCTGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: DCRAEAVVEETT*QPVTLESACSG
Trigger: TCCAGAACAGGCTGACTCCAGAGTCACTGGCTGTCATGTAGTTTCCTCAACTACTGCCTCAGCTCTACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS TCA 72 bp ATATGGTTTGGCTGTGTCCCCAACCAAAGCTCAACTTaGATTGTACCTCCCAGGATTCCCACGTGTTGTGGG +
Preference number: 6 (lower is better)
Translates to: IWFGCVPNQSST*IVPPRIPTCCG
Trigger: CCCACAACACGTGGGAATCCTGGGAGGTACAATTCAAGTTGAGCTTTGGTTGGGGACACAGCCAAACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 72 bp GATATGGTTTGGCTGTGTCCCCAACCAAAGCTCAACTaGAATTGTACCTCCCAGGATTCCCACGTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: DMVWLCPQPKLN*NCTSQDSHVLW
Trigger: CCACAACACGTGGGAATCCTGGGAGGTACAATTCAAGTTGAGCTTTGGTTGGGGACACAGCCAAACCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS TCA 72 bp ACAGCCAGTGACTCTGGAGTCAGCCTGTTCTGGATCTaGATCCCGGTTCTTCCACTTGCTAGTGATTACTTA +
Preference number: 6 (lower is better)
Translates to: TASDSGVSLFWI*IPVLPLASDYL
Trigger: TAAGTAATCACTAGCAAGTGGAAGAACCGGGATTCAGATCCAGAACAGGCTGACTCCAGAGTCACTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS TCA 72 bp TCCTTGGATACAAGGAACACAACAAACATGTCAGTGTaGAGGCCACATTGGGTGGGTGGTGGGAGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: SLDTRNTTNMSV*RPHWVGGGSFS
Trigger: GGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTGACATGTTTGTTGTGTTCCTTGTATCCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS GCA 72 bp CTTTCACATTTTCTCTTGCCGCCACCATGTAAGAAGTaGCTTTCACCTCCCACCATGATTCTGAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSHFLLPPPCKK*LSPPTMILRSP
Trigger: AGGAGACCTCAGAATCATGGTGGGAGGTGAAAGGCACTTCTTACATGGTGGCGGCAAGAGAAAATGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 72 bp AAGGAACACAACAAACATGTCAGTGTGAAGGCCACATaGGGTGGGTGGTGGGAGTTTTTCCACCGTGATCTA +
Preference number: 6 (lower is better)
Translates to: KEHNKHVSVKAT*GGWWEFFHRDL
Trigger: TAGATCACGGTGGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTGACATGTTTGTTGTGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 90 bp CTTGGATACAAGGAACACAACAAACATGTCAGTGTGAAGGCCACATaGGGTGGGTGGTGGGAGTTTTTCCACCGTGATCTAGAAATGTCA +
Preference number: 6 (lower is better)
Translates to: LGYKEHNKHVSVKAT*GGWWEFFHRDLEMS
Trigger: TGACATTTCTAGATCACGGTGGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTGACATGTTTGTTGTGTTCCTTGTATCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 72 bp TCACAAGAACTGATGGGTTTATCGGGGGTTCCGCTTTaGCTTCTTTCACATTTTCTCTTGCCGCCACCATGT +
Preference number: 6 (lower is better)
Translates to: SQELMGLSGVPL*LLSHFLLPPPC
Trigger: ACATGGTGGCGGCAAGAGAAAATGTGAAAGAAGCAAAAGCGGAACCCCCGATAAACCCATCAGTTCTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS GCA 72 bp AAAGACCAGGGACATGGCTTTACAAAGTTTAATTCCTaGCACCTCTACCTCTTCCTGGCTCTTCATTTGGAG +
Preference number: 6 (lower is better)
Translates to: KDQGHGFTKFNS*HLYLFLALHLE
Trigger: CTCCAAATGAAGAGCCAGGAAGAGGTAGAGGTGGCAGGAATTAAACTTTGTAAAGCCATGTCCCTGGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601059.1
CDS CCA 72 bp AAACATGTCAGTGTGAAGGCCACATTGGGTGGGTGGTaGGAGTTTTTCCACCGTGATCTAGAAATGTCAATT +
Preference number: 6 (lower is better)
Translates to: KHVSVKATLGGW*EFFHRDLEMSI
Trigger: AATTGACATTTCTAGATCACGGTGGAAAAACTCCCACCACCCACCCAATGTGGCCTTCACACTGACATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CCA 72 bp TTCCTTCAACTTAACAGATGGCTCCTATGTCACTCCTaGCCAGCTTCCTGTAAAAGTCAAAGTTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: FLQLNRWLLCHS*PASCKSQSLSF
Trigger: GAAGGACAAACTTTGACTTTTACAGGAAGCTGGCCAGGAGTGACATAGGAGCCATCTGTTAAGTTGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS TCA 72 bp GCTATTCTCGTGATAGTGAATAAGTCTCACAAGAACTaGTGGGTTTATCGGGGGTTCCGCTTTTGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: AILVIVNKSHKN*WVYRGFRFCFF
Trigger: AAAGAAGCAAAAGCGGAACCCCCGATAAACCCATCAGTTCTTGTGAGACTTATTCACTATCACGAGAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS GCA 72 bp GTTCTTCCACTTGCTAGTGATTACTTATCCTCTCTATaGTTCTGTGTCTTCATCTGTGTACTCAGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: VLPLASDYLSSL*FCVFICVLSPH
Trigger: ATGGGGACTGAGTACACAGATGAAGACACAGAAGCATAGAGAGGATAAGTAATCACTAGCAAGTGGAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330619.13
ENST00000601059.1
ENST00000601902.5
CDS CAA 90 bp TATCTGGTGGGGCAGTTTGGTGTCATTCCCATTTCAATTAGTCTTTaGATCAGAGATGCTCCTTCAGTTACAACCTCTCTACATAGCATT +
Preference number: 6 (lower is better)
Translates to: YLVGQFGVIPISISL*IRDAPSVTTSLHSI
Trigger: AATGCTATGTAGAGAGGTTGTAACTGAAGGAGCATCTCTGATCAAAAGACTAATTGAAATGGGAATGACACCAAACTGCCCCACCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601059.1
CDS CAA 72 bp CAAAGTTTGTCCTTCTGGGGTAAACTGCCAGAGACATaGTTCAGTTATTGCCAAGACTTCTCTTTAGTAAGA +
Preference number: 6 (lower is better)
Translates to: QSLSFWGKLPET*FSYCQDFSLVR
Trigger: TCTTACTAAAGAGAAGTCTTGGCAATAACTGAACAATGTCTCTGGCAGTTTACCCCAGAAGGACAAACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601579.1
CDS CAA 90 bp TGTAAAAGTCAAAGTTTGTCCTTCTGGGGTAAACTGCCAGAGACATaGTTCAGTTATTGCCAAGACTTCTCTTTAGTAAGAAATGGGAAC +
Preference number: 6 (lower is better)
Translates to: CKSQSLSFWGKLPET*FSYCQDFSLVRNGN
Trigger: GTTCCCATTTCTTACTAAAGAGAAGTCTTGGCAATAACTGAACAATGTCTCTGGCAGTTTACCCCAGAAGGACAAACTTTGACTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601579.1