RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF469 (Homo sapiens)

Ensembl gene IDs: ENSG00000225614

Ensembl transcript IDs: ENST00000437464.1, ENST00000565624.3

Found 1717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTaGGAGGGAACGAGGAGGGCCCGCGGGAGCTGGCACAGGGGCGGT +
Preference number: 1 (lower is better)
Translates to: RAPYSREALEGGHGG*EGTRRARGSWHRGG
Trigger: ACCGCCCCTGTGCCAGCTCCCGCGGGCCCTCCTCGTTCCCTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 90 bp CCTTCACAGGCACGACGCTGTGAGAGGACACGTGCGTCCCAGGCCTaGGTTGGGTCGGTGCATGAGGGTGCCCTGGCCAGGGCAGCGGCT +
Preference number: 1 (lower is better)
Translates to: PSQARRCERTRASQA*VGSVHEGALARAAA
Trigger: AGCCGCTGCCCTGGCCAGGGCACCCTCATGCACCGACCCAACCCAGGCCTGGGACGCACGTGTCCTCTCACAGCGTCGTGCCTGTGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 90 bp CTCAGGGCCCCTCCGCACTTGGTTTGCGACACTCCGGAGGCGTTTTaGATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCTGATT +
Preference number: 1 (lower is better)
Translates to: LRAPPHLVCDTPEAF*MAYNTFQRGGLGLI
Trigger: AATCAGGCCCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 90 bp TGGCCCCGTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTaGCCACCTGGGCCCTGTTCAAAGCATCACCACCTCAGCTCTGAC +
Preference number: 1 (lower is better)
Translates to: WPRLSPPAFQQEREC*PPGPCSKHHHLSSD
Trigger: GTCAGAGCTGAGGTGGTGATGCTTTGAACAGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGACGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 90 bp CTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCT +
Preference number: 1 (lower is better)
Translates to: LLHVGEREVVQISKH*LLWCRCPQGAGVWA
Trigger: AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 90 bp AAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTaGGCTGAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCA +
Preference number: 1 (lower is better)
Translates to: KHWLLWCRCPQGAGV*AEGMGCCLFKYLVP
Trigger: TGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTCAGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 90 bp GCACAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTaGGGTCAAGGTGTGCTAGAGATGGGCTTTTCTCCCGCAGAGCAA +
Preference number: 1 (lower is better)
Translates to: AQGRFLPSSIREPGS*GQGVLEMGFSPAEQ
Trigger: TTGCTCTGCGGGAGAAAAGCCCATCTCTAGCACACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 90 bp GCAACAGCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTaGCTCAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: ATAARLRGNLPPSHG*LNLLPFSMWGNGRL
Trigger: CAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGCTGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 90 bp ATGCTGCCCACCTGGGCCCTGTTCAAAGCATCACCACCTCAGCTCTaGCATCAAGGCCTGAGCAGTTGCACAAGAAGTCAAGTGGCCACA +
Preference number: 1 (lower is better)
Translates to: MLPTWALFKASPPQL*HQGLSSCTRSQVAT
Trigger: TGTGGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGATGCTTTGAACAGGGCCCAGGTGGGCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 90 bp GGGCCCTGTTCAAAGCATCACCACCTCAGCTCTGACATCAAGGCCTaGGCAGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCT +
Preference number: 1 (lower is better)
Translates to: GPCSKHHHLSSDIKA*AVAQEVKWPQSGPS
Trigger: AGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGATGCTTTGAACAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 90 bp TGCCTCAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTaGAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGG +
Preference number: 1 (lower is better)
Translates to: CLNLLPFSMWGNGRL*KSPNIGFCGVGAHR
Trigger: CCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 90 bp AGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTaGTTTGCGACACTCCGGAGGCGTTTTGAATGGCCTACAACACCT +
Preference number: 1 (lower is better)
Translates to: SHYDVYSTTSGPLRT*FATLRRRFEWPTTP
Trigger: AGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp CACAGGCACGACGCTGTGAGAGGACACGTGCGTCCCAGGCCTGGGTaGGGTCGGTGCATGAGGGTGCCCTGGCCAGGGCAGCGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: HRHDAVRGHVRPRPG*GRCMRVPWPGQRLC
Trigger: GCAGAGCCGCTGCCCTGGCCAGGGCACCCTCATGCACCGACCCAACCCAGGCCTGGGACGCACGTGTCCTCTCACAGCGTCGTGCCTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCAAGGCCTGAGCAGTTaGACAAGAAGTCAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PRAPYSREALEGGHGGWEQGLSS*TRSQVA
Trigger: GGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGAGAGCAAATGGAGGCTaGCATGACCCTGTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: PRAPYSREALEGGHGGWERANGG*HDPVVR
Trigger: TCTGACCACAGGGTCATGCCAGCCTCCATTTGCTCT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCCTCGACAAGCCATaGTGGGGCCTCCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWALDKP*WGLPDP
Trigger: GGGGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp CCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATaGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: PSPCGGTGGCANLQT*ASVVSVPTGRRGVG
Trigger: GCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp CCTCAGGGCCCCTCCGCACTTGGTTTGCGACACTCCGGAGGCGTTTaGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCTGAT +
Preference number: 2 (lower is better)
Translates to: PQGPSALGLRHSGGV*NGLQHLPERRSGPD
Trigger: ATCAGGCCCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTCAGGGAGCCGGAGCTaGCCAAGGAGGCAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: CCALGGPGGSEATLLSSESGSRS*PRRQAE
Trigger: CTCGGCCTGCCTCCTTGGCCAGCTCCGGCTCCCTGA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCACCACCTCAGCTCTaGCATCAAGGCCTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSPPQL*HQGLSS
Trigger: ACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTaGCCACAGGGCGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLLWCR*PQGAGV
Trigger: CACCCCTGCGCCCTGTGGGCACCGACACCACAGAAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCAGGGCGCAGGGGTGTaGGCTGAGGGGATGGGCTGC +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFQGAGV*AEGMGC
Trigger: GCAGCCCATCCCCTCAGCCCACACCCCTGCGCCCTG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCAAGTGGCCACAGAGTaGACCATCTCAGGGAGCCGG +
Preference number: 2 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLQVATE*TISGSR
Trigger: CCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCAAGTGGCCACAGAGTaGACCATCTCAGGGAGCCGG +
Preference number: 2 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSQVATE*TISGSR
Trigger: CCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTAGGGCCCGCGGGAGCTaGCACAGGGGCGGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFRARGS*HRGGFF
Trigger: GAAGAAACCGCCCCTGTGCCAGCTCCCGCGGGCCCT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp GGCTGCCTCAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTaGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: GCLNLLPFSMWGNGR*CKSPNIGFCGVGAH
Trigger: GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTGAGGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGC +
Preference number: 2 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGQISKH*LLWCRC
Trigger: GCACCGACACCACAGAAGCCAATGTTTGGAGATTTG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp AAGATACTTATGGAGAGAAGGGTGAGAAGGAAGCCCTCTCACCCTTaGACCCACCTTCACAGGCACGACGCTGTGAGAGGACACGTGCGT +
Preference number: 2 (lower is better)
Translates to: KILMERRVRRKPSHP*THLHRHDAVRGHVR
Trigger: ACGCACGTGTCCTCTCACAGCGTCGTGCCTGTGAAGGTGGGTCAAAGGGTGAGAGGGCTTCCTTCTCACCCTTCTCTCCATAAGTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR TCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTCACCACCTCAGCTCTaGCATCAAGGCCTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHSPPQL*HQGLSS
Trigger: ACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTACAGGCACGACGCTGTaGGAGGACACGTGCGTCCCA +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFTGTTL*EDTCVP
Trigger: TGGGACGCACGTGTCCTCTCACAGCGTCGTGCCTGT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCATGCAGGTGCCCGTaGCCTCGACAAGCCATGGTG +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPCRCP*PRQAMV
Trigger: CACCATGGCTTGTCGAGGGCACGGGCACCTGCATGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp GTTCAAAGCATCACCACCTCAGCTCTGACATCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VQSITTSALTSRPEQ*HKKSSGHRVDHLRE
Trigger: CTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGATGCTTTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTGGTCTCAAAAGGGCTaGAGTGGCCCCGTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: TSLLHVGEREVVQISKHWWSQKG*SGPVFH
Trigger: GTGAAAGACGGGGCCACTGCAGCCCTTTTGAGACCA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp ACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTaGCGACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCA +
Preference number: 2 (lower is better)
Translates to: TMMFTVQPQGPSALG*RHSGGVLNGLQHLP
Trigger: TGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTCTGACATCAAGGCCTaGGCAGTTGCACAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSDIKA*AVAQEV
Trigger: GACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCTGACATCAAGGCCTaGGCAGTTGCACAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSDIKA*AVAQEV
Trigger: GACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCAAGGCCTGAGCAGTTaGACAAGAAGTCAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: TSLLHVGEREVVQISKHWQGLSS*TRSQVA
Trigger: GGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGGTCTCAAAAGGGCTaGAGTGGCCCCGTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQWSQKG*SGPVFH
Trigger: GTGAAAGACGGGGCCACTGCAGCCCTTTTGAGACCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCTGAGGGGATGGGCTaGTGTCTCTTCAAGTACTTG +
Preference number: 2 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAEGMG*CLFKYL
Trigger: CAAGTACTTGAAGAGACAGCAGCCCATCCCCTCAGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGAAACATTGGCTTCTGTaGTGTCGGTGCCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQKHWLL*CRCPQG
Trigger: GCCCTGTGGGCACCGACACCACAGAAGCCAATGTTT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCACAAGAAGTCAAGTaGCCACAGAGTGGACCATCT +
Preference number: 2 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAQEVK*PQSGPS
Trigger: AGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGC +
Preference number: 2 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLQISKH*LLWCRC
Trigger: GCACCGACACCACAGAAGCCAATGTTTGGAGATTTG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCTAAGTAGTGAGCACTaGCTTCCCCCACGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLSSEH*LPPRGF
Trigger: GAAACCACGTGGGGGAAGGCAGTGCTCACTACTTAG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGGAACGGGAGGTTGTaGAAATCTCCAAACATTGGC +
Preference number: 2 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGNGRL*KSPNIG
Trigger: GCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCACAAGAAGTCAAGTaGCCACAGAGTGGACCATCT +
Preference number: 2 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALAQEVK*PQSGPS
Trigger: AGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCGGAGGCGTTTTGAATaGCCTACAACACCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALRRRFE*PTTPSR
Trigger: TCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 90 bp TTCACATTACAACACAAAAATAGCACCAGAAACTTCAGAGTAACATaGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: FTLQHKNSTRNFRVT*QIGGAQSSVQQGGS
Trigger: AGAGCCTCCCTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCTATTTTTGTGTTGTAATGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGTCTGGGCCTGATTTaGTCTCTTTCAAATATCAAA +
Preference number: 2 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGLGLI*SLSNIK
Trigger: TTTGATATTTGAAAGAGACCAAATCAGGCCCAGACC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 72 bp CCGGCAGGGGAGGCAGGGAGAGCGCCGCCATGCAGGTaGCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: PAGEAGRAPPCR*PCPRQAMVGPP
Trigger: GGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGCGCTCTCCCTGCCTCCCCTGCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 72 bp TGCAGCCCGGCAGGGGAGGCAGGGAGAGCGCCGCCATaGAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGG +
Preference number: 3 (lower is better)
Translates to: CSPAGEAGRAPP*RCPCPRQAMVG
Trigger: CCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGCGCTCTCCCTGCCTCCCCTGCCGGGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 72 bp GACACGTGCGTCCCAGGCCTGGGTTGGGTCGGTGCATaGGGGTGCCCTGGCCAGGGCAGCGGCTCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: DTCVPGLGWVGA*GCPGQGSGSAA
Trigger: GGCTGCAGAGCCGCTGCCCTGGCCAGGGCACCCTCATGCACCGACCCAACCCAGGCCTGGGACGCACGTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp TACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTaGGAGGGAACGAGGAGGGCCCGCGGGAGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: YSREALEGGHGG*EGTRRARGSWH
Trigger: GTGCCAGCTCCCGCGGGCCCTCCTCGTTCCCTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CGCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATaGTGGGGCCTCCCTGACCCCGTCTGTCCCACCCAA +
Preference number: 3 (lower is better)
Translates to: RRHAGARALDKP*WGLPDPVCPTQ
Trigger: TTGGGTGGGACAGACGGGGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp GCACGACGCTGTGAGAGGACACGTGCGTCCCAGGCCTaGGTTGGGTCGGTGCATGAGGGTGCCCTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: ARRCERTRASQA*VGSVHEGALAR
Trigger: CCTGGCCAGGGCACCCTCATGCACCGACCCAACCCAGGCCTGGGACGCACGTGTCCTCTCACAGCGTCGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp GTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTaGCCAAGGAGGCAGGCCGAGACAGGAACGCCCAGC +
Preference number: 3 (lower is better)
Translates to: VATEWTISGSRS*PRRQAETGTPS
Trigger: GCTGGGCGTTCCTGTCTCGGCCTGCCTCCTTGGCCAGCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTaGGGCCTCCCTGACCCCGTCTGTCCCACCCAATAC +
Preference number: 3 (lower is better)
Translates to: RHAGARALDKPW*GLPDPVCPTQY
Trigger: GTATTGGGTGGGACAGACGGGGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCACAGACCTCAGGCTaGCAGCCCGGCAGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWAQTSG*QPGRGG
Trigger: GCCTCCCCTGCCGGGCTGCAAGCCTGAGGTCTGTGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGGGGGAACGGGAGGTaGTGCAAATCTCCAAACATT +
Preference number: 3 (lower is better)
Translates to: PRAPYSREALEGGHGGWEWGNGR*CKSPNI
Trigger: AATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 72 bp GTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTaGCCACAGGGCGCAGGGGTGTGGGCTGAGGGGATG +
Preference number: 3 (lower is better)
Translates to: VQISKHWLLWCR*PQGAGVWAEGM
Trigger: CATCCCCTCAGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTaGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: REVVQISKHWLL*CRCPQGAGVWA
Trigger: AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp GTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGG +
Preference number: 3 (lower is better)
Translates to: VGEREVVQISKH*LLWCRCPQGAG
Trigger: CCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CTGAGCAGTTGCACAAGAAGTCAAGTGGCCACAGAGTaGACCATCTCAGGGAGCCGGAGCTGGCCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: LSSCTRSQVATE*TISGSRSWPRR
Trigger: CCTCCTTGGCCAGCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CGCACTTGGTTTGCGACACTCCGGAGGCGTTTTGAATaGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RTWFATLRRRFE*PTTPSREAVWA
Trigger: GGCCCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGSRPEQ*HKKSSG
Trigger: GCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 72 bp CCTCCGCACTTGGTTTGCGACACTCCGGAGGCGTTTTaGATGGCCTACAACACCTTCCAGAGAGGCGGTCTG +
Preference number: 3 (lower is better)
Translates to: PPHLVCDTPEAF*MAYNTFQRGGL
Trigger: CAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp CGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTaGGGTCAAGGTGTGCTAGAGATGGGCTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: RFLPSSIREPGS*GQGVLEMGFSP
Trigger: GGGAGAAAAGCCCATCTCTAGCACACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR GCA 72 bp GCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTaGCTCAACTTACTTCCCTTCTCCATGTGGGGGAAC +
Preference number: 3 (lower is better)
Translates to: ARLRGNLPPSHG*LNLLPFSMWGN
Trigger: GTTCCCCCACATGGAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp GATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTaGTTTGCGACACTCCGGAGGCGTTTTGAATGGCCT +
Preference number: 3 (lower is better)
Translates to: DVYSTTSGPLRT*FATLRRRFEWP
Trigger: AGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSRPEQ*HKKSSG
Trigger: GCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTTTCTAAGGTCACTTaGGAATTCCAGCAACAGCAG +
Preference number: 3 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVSKVT*EFQQQQ
Trigger: CTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR TCA 72 bp TCAAAGCATCACCACCTCAGCTCTGACATCAAGGCCTaGGCAGTTGCACAAGAAGTCAAGTGGCCACAGAGT +
Preference number: 3 (lower is better)
Translates to: SKHHHLSSDIKA*AVAQEVKWPQS
Trigger: ACTCTGTGGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CCA 72 bp GCACTGCCTTCCCCCACGTGGTTTCTAAGGTCACTTTaGAATTCCAGCAACAGCAGCAAGACTAAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: ALPSPTWFLRSL*NSSNSSKTKRE
Trigger: TTCCCTCTTAGTCTTGCTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAACCACGTGGGGGAAGGCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTGTCTCTTCAAGTACTaGGTACCAAGAAAACAGCTG +
Preference number: 3 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLCLFKY*VPRKQL
Trigger: CAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCCTCGGGGAGCTCCATaGCCTGGGCCTGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTPRGAP*PGPGRQ
Trigger: CTGGCGGCCAGGCCCAGGCCATGGAGCTCCCCGAGG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGTGGGGTCCCACAGCTaGGGCAGCCTGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTVGSHS*GSLAGG
Trigger: CCCACCCGCCAGGCTGCCCCAGCTGTGGGACCCCAC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGTGGCGCTGCCCTTGTaGAAGGCGCCTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTVALPL*KAPRGP
Trigger: GGGGCCCCGAGGCGCCTTCCACAAGGGCAGCGCCAC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCCTGCCCGCCAGCCTTaGGGGAGCCTGCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTPARQP*GSLQGA
Trigger: AGCCCCTTGCAGGCTCCCTCAAGGCTGGCGGGCAGG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGCTGTGGGCCCTGCTaGTGTCCTCCGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGCGPC*CPPQAR
Trigger: GCGAGCCTGCGGAGGACAGCAGCAGGGCCCACAGCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTGCGCGTGCCTCTCCTaGAGGTGCCCCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTCACLS*RCPRSS
Trigger: GCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCCGGCGGGGCATCCCTaGCTGAGGGCTTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTPAGHP*LRAWGA
Trigger: TGCACCCCAAGCCCTCAGCCAGGGATGCCCCGCCGG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCCTCGGCCGTCCGGTaGGTGTGTGGCTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTASAVR*VCGSAG
Trigger: ACCTGCCGAGCCACACACCCACCGGACGGCCGAGGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGCTCTAGAGGCTGCTaGGCAGGCAAGGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGSRGC*AGKAAG
Trigger: CCCAGCGGCCTTGCCTGCTCAGCAGCCTCTAGAGCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGGAGCTGGAGTCGCTaGGGTCCGTGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGSWSR*GPWAGG
Trigger: CCCGCCTGCCCACGGACCTCAGCGACTCCAGCTCCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCAAACTCCCCTGGGGCTaGCGCCGGGCCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTKLPWG*RRACCL
Trigger: AAGGCAGCAGGCCCGGCGGCAGCCCCAGGGGAGTTT...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGCAGCTGCTGGTGGTaGTGTCCGCCGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGSCWW*CPPESW
Trigger: CCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGACGCGCTGCGGGCTGTaGACCGCCAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWETRCGL*TARWRC
Trigger: GCAGCGCCACCTGGCGGTGCACAGCCCGCAGCGCGT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGGAGCTCCATGGCCTaGGCCTGGCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGSSMA*AWPPAS
Trigger: GGAGGCTGGCGGCCAGGCCCAGGCCATGGAGCTCCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTGGGGTCCCACAGCTaGGGCAGCCTGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVGSHS*GSLAGG
Trigger: CCCACCCGCCAGGCTGCCCCAGCTGTGGGACCCCAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCATTCCGTGGGGACTTaGCCGGGCGGTCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTHSVGT*PGGREH
Trigger: GTGCTCCCGACCGCCCGGCCAAGTCCCCACGGAATG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGGCCTGGAGACCGCTaGTGGCCATCCTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGPGDR*WPSLAL
Trigger: CAGGGCCAAGGATGGCCACCAGCGGTCTCCAGGCCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTTTGGGGGTCCGGCGTaGCTGCTGGGAGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEFGGPA*LLGAGA
Trigger: CGCCCCCGCTCCCAGCAGCCACGCCGGACCCCCAAA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTGGCGCTGCCCTTGTaGAAGGCGCCTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVALPL*KAPRGP
Trigger: GGGGCCCCGAGGCGCCTTCCACAAGGGCAGCGCCAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGAGCTGCCCGCTGGCTaGCTGGGGCTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEELPAG*LGLAAT
Trigger: GGTGGCAGCCAGCCCCAGCCAGCCAGCGGGCAGCTC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCCTCTTCCCAGGGGTaGTGCTCGGGGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPSSQG*CSGPGL
Trigger: GAGGCCAGGCCCCGAGCAGCACCCCTGGGAAGAGGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGGGGAGACGGCCCCTaGCAGAGGAGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGGDGP*QRRRGG
Trigger: GCCACCTCTCCTCCTCTGGCAGGGGCCGTCTCCCCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCTTCTGTGGTGTCGGTaGCCACAGGGCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTLLWCR*PQGAGV
Trigger: CACCCCTGCGCCCTGTGGGCACCGACACCACAGAAG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCGCCGCCATGCAGGTaGCCGTGCCCTCGACAAGCC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEAPPCR*PCPRQA
Trigger: GGCTTGTCGAGGGCACGGGCACCTGCATGGCGGCGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGGCTGCTGGCAACTTaGCGGGGCTGCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGLLAT*RGCRSP
Trigger: TGGAGACCTGCAGCCCCGCCAAGTTGCCAGCAGCCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGCCGGCCGTGTTGGTaGCCGGTGACGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWECRPCW*PVTAVG
Trigger: CCCCACTGCCGTCACCGGCCACCAACACGGCCGGCA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCGCATCCGCCTCGGTaGGGGCCAGACCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEAHPPR*GPDPGN
Trigger: GTTCCCTGGGTCTGGCCCCCACCGAGGCGGATGCGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGTGGGCGGCTGAAGTaGGTGAGGGGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWECGRLK*VRGRRR
Trigger: CCGCCTGCGCCCCCTCACCCACTTCAGCCGCCCACA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTGCCACCTCCTGTCTTaGTGCCGGGGCGAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTCHLLS*CRGEGF
Trigger: GAAGCCCTCGCCCCGGCACCAAGACAGGAGGTGGCA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCGGGGGCGGAGCTTTaGTCTCTGGAGTCACCCCCG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEAGAEL*SLESPP
Trigger: CGGGGGTGACTCCAGAGAGCAAAGCTCCGCCCCCGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGAGCGGAAGGAGGCTaGGCAGACCTCACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGAEGG*ADLTGH
Trigger: GTGACCTGTGAGGTCTGCGCAGCCTCCTTCCGCTCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCACGCGGCTGGGAGTTaGCTGCTTCCGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEHAAGS*LLPRGP
Trigger: CGGACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCAGAACATACTCCTGGTaGCAGCCAGGGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTRTYSW*QPGGPQ
Trigger: CTGGGGGCCCCCTGGCTGCCACCAGGAGTATGTTCT...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTCTTTGCCCTCGGCCTaGGCGTCCCCAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTSLPSA*ASPANR
Trigger: CCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAAAGA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCTGGCTGAAGCTGGTTaGCTGTGCCTTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTLAEAG*LCLGPG
Trigger: CCCAGGGCCAAGGCACAGCCAACCAGCTTCAGCCAG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGCCCATGTGGAGCTTaGCCCTTCCACTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGPCGA*PFHWPF
Trigger: GAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp GACGCTGTGAGAGGACACGTGCGTCCCAGGCCTGGGTaGGGTCGGTGCATGAGGGTGCCCTGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: DAVRGHVRPRPG*GRCMRVPWPGQ
Trigger: CTGCCCTGGCCAGGGCACCCTCATGCACCGACCCAACCCAGGCCTGGGACGCACGTGTCCTCTCACAGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCACGATCTTCAGAATaGGCTCCTTGCCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTARSSE*APCPRR
Trigger: GCGCCTGGGGCAAGGAGCTCATTCTGAAGATCGTGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCCCGAAGAGCTGGCTaGGGAGGTCACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEARRAG*GGHSGP
Trigger: AGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCAACTTGGCGGGGCTaGAGGTCTCCAGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTATWRG*RSPVMV
Trigger: CACCATGACTGGAGACCTGCAGCCCCGCCAAGTTGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTTTGTGCTGGCCCCATaGAGTGCCGGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTFVLAP*SAGKGN
Trigger: GTTCCCCTTCCCGGCACTGCATGGGGCCAGCACAAA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGAAGGCCGCCAGGCTaGTGTAGTTGCGGTCACACT +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGRPPG*CSCGHT
Trigger: AGTGTGACCGCAACTACAGCAGCCTGGCGGCCTTCC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTAAGGACCTCCGCGCCTaGCCCCTGCGGGCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAKDLRA*PLRAKR
Trigger: CCGCTTCGCCCGCAGGGGGCAGGCGCGGAGGTCCTT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCTGGCCTCTCAGGGATaGGGGCTTGAGCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWELASQG*GLELPV
Trigger: GACGGGGAGCTCAAGCCCCCATCCCTGAGAGGCCAG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCGTCCAGGGTGGGCTTaGTCCTCGAGCTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWERPGWA*SSSWRC
Trigger: GCATCGCCAGCTCGAGGACCAAGCCCACCCTGGACG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGAGAACGTGTCCTCGTaGGGCACGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEENVSS*GTVAWQ
Trigger: CTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGACTGCACCCTCGGTaGGGCCGGTCAGCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGLHPR*GRSALF
Trigger: AAACAGCGCTGACCGGCCCCACCGAGGGTGCAGTCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGTTCAGGCCGGGGCTaGACGCCCTCTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWECSGRG*TPSLES
Trigger: GGACTCCAGAGAGGGCGTCCAGCCCCGGCCTGAACA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTCCCCCTGGGGAGTCTaGTGGGAGGCATTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTSPWGV*WEAFLW
Trigger: CCACAGAAATGCCTCCCACCAGACTCCCCAGGGGGA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCGTGCGTCCCAGGCCTaGGTTGGGTCGGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWERASQA*VGSVHE
Trigger: CTCATGCACCGACCCAACCCAGGCCTGGGACGCACG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGGAGCTGGAGTCGCTaGGGTCCGTGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGSWSR*GPWAGG
Trigger: CCCGCCTGCCCACGGACCTCAGCGACTCCAGCTCCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCCAAGCGAGGCGGCTaGTCCCCGTCAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAAKRGG*SPSASG
Trigger: GCCTGAGGCTGACGGGGAGCAGCCGCCTCGCTTGGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGTAGGAGGCCCGCCTaGCCTTGGCCGGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGCRRPA*PWPAGL
Trigger: GAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCTCCTTCAGGCACATaGCGCACGCCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPPSGT*RTPRAR
Trigger: CCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCGTGCTCACGCAGGTaGTCGTTGTACATCCAGACG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTACSRR*SLYIQT
Trigger: CGTCTGGATGTACAACGAGCACCTGCGTGAGCACGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCGCGGGAGGGGTCCTTaGAGGCCTCGTGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGRGRGP*RPRAPG
Trigger: CCCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTACGCGCTGCGGGCTGTaGACCGCCAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPTRCGL*TARWRC
Trigger: GCAGCGCCACCTGGCGGTGCACAGCCCGCAGCGCGT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCCTTGGCCCCTTGGTaGAGCTCTTGGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPLAPW*SSWLGL
Trigger: GAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCGGCTGGGAGTTGCCTaGTTCCGAGGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWARLGVA*FRGVRG
Trigger: CCCCCGGACCCCTCGGAAGCAGGCAACTCCCAGCCG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGAGCGGGAAGGGGGTaGCGGCCAGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGAGRG*RPGWAG
Trigger: TCCTGCCCAGCCTGGCCGCCACCCCCTTCCCGCTCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCTCTGCTGCCTGCCCTaGCTGGGCGCATCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALCCLP*LGASAS
Trigger: CGAGGCGGATGCGCCCAGCCAGGGCAGGCAGCAGAG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCGTGGGGCGCCGTGTTaGCGAGGCTTCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWARGAPC*RGFPTA
Trigger: AGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCCCCTCGGTGGGGCTaGTCTGCTGTGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAAPRWG*SAVPGS
Trigger: AGAGCCCGGCACAGCAGACCAGCCCCACCGAGGGGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGACCTCCTGCTAGGGTaGGTGTTGGATACACAGGCG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTDLLLG*VLDTQA
Trigger: CGCCTGTGTATCCAACACCCACCCTAGCAGGAGGTC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCTGGGGGTCTGGCCCTaGGAGTCCCCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALGVWP*ESPACL
Trigger: CAGGCAGGCAGGGGACTCCCAGGGCCAGACCCCCAG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGGGGCTCCCGGGTGTaGCCGGTGCTTCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGGSRV*PVLPGL
Trigger: AAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCACACAGAGCCTCCTaGTCAGTCTCCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEAHRAS*SVSAAP
Trigger: GGGTGCAGCGGAGACTGACCAGGAGGCTCTGTGTGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCGAAGTCTAAGAAGCTaGGGCCGGGGAGACCCACGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWERSLRS*GRGDPR
Trigger: CCGTGGGTCTCCCCGGCCCCAGCTTCTTAGACTTCG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCTCGTGCACCGGGGTaGCTTGCAGGAGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPRAPG*LAGGAP
Trigger: GGGAGCCCCTCCTGCAAGCCACCCCGGTGCACGAGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGGCACTGCCGGGCATaGCCACCCTGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGHCRA*PPCAVC
Trigger: GCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTCTCGGGCCATCCCTTaGTGGTGCTGGGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWESRAIP*WCWEPP
Trigger: AGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTCTGGAGCTGCCCGCTaGCTGGCTGGGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWASGAAR*LAGAGC
Trigger: GCAGCCAGCCCCAGCCAGCCAGCGGGCAGCTCCAGA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCCTCGGCCGTCCGGTaGGTGTGTGGCTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAASAVR*VCGSAG
Trigger: ACCTGCCGAGCCACACACCCACCGGACGGCCGAGGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGGGGTGGCGCTTGGTaGGGTATAGTTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGGGAW*GIVGGG
Trigger: ACCTCCACCAACTATACCTCACCAAGCGCCACCCCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCAGGCGGTGGCTGGGTaGCGTGGCTGGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRQAVAG*RGWGLP
Trigger: GGGGAGACCCCAGCCACGTCACCCAGCCACCGCCTG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCAGGAGACCGGGGCTTaGTCCCATTTCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEQETGA*SHFSRT
Trigger: TGTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTGGCTCGGAGAGGCTaGGTAACTGGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVARRG*VTGHCR
Trigger: CCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGCGCGTGCCTCTCCTaGAGGTGCCCCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGCACLS*RCPRSS
Trigger: GCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTGCCGGCGGAGCGCTTaGCCCTGTGGTGTTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWACRRSA*PCGVWA
Trigger: CGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCATGTGGCGGTCGAACTaGTCCTTCTTGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTMWRSN*SFLAKV
Trigger: CACCTTCGCCAAGAAGGAGCAGTTCGACCGCCACAT...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCTCCCGTGGGGCCCCTaGTCACCAGCTTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALPWGP*SPASLG
Trigger: GCCAAGGGAAGCTGGTGAGCAGGGGCCCCACGGGAG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCTCCCCAGCCCATCCTaGGCTGAAGGTGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWELPSPS*AEGGLS
Trigger: CGAAAGACCACCTTCAGCCCAGGATGGGCTGGGGAG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCGTGGGGTGAAACCTaGGGCTGGGCCACCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPWGET*GWATPK
Trigger: CTTCGGGGTGGCCCAGCCCCAGGTTTCACCCCACGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCAGTGGGGACTCGCTaGGGGAGGCTCCCACTACCC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAAVGTR*GRLPLP
Trigger: GGGTAGTGGGAGCCTCCCCCAGCGAGTCCCCACTGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCTGCTGAGGGAGAAGTaGTGTGTGGGGTACGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWELLREK*CVGYGG
Trigger: GCCTCCGTACCCCACACACCACTTCTCCCTCAGCAG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCGGAGCTTTGCTCTCTaGAGTCACCCCCGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWERSFAL*SHPRLA
Trigger: AGCAAGGCGGGGGTGACTCCAGAGAGCAAAGCTCCG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGCTGCCTGCCCTGGCTaGGCGCATCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRAACPG*AHPPRW
Trigger: CCACCGAGGCGGATGCGCCCAGCCAGGGCAGGCAGC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGTTGGCGAGCTTCCGTaGGGCGCCGTGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAVGELP*GAVLAR
Trigger: CCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAAC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCTCCTGAAGGCTCATaGCTGCCCTGCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPPEGS*LPCFPC
Trigger: GCAAGGGAAGCAGGGCAGCCATGAGCCTTCAGGAGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGGCTGGGCCCAGCGTaGGGTCACCGCCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGLGPA*GHRPPQ
Trigger: TTGAGGAGGGCGGTGACCCCACGCTGGGCCCAGCCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCACCAGCTTCCCTGCTaGGCTCCAGGGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAHQLPC*APGPTG
Trigger: GCCTGTGGGCCCTGGAGCCCAGCAGGGAAGCTGGTG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCCCCGTCTGGGTTGCTaGGGGTGCTGCGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRPRLGC*GCCVPG
Trigger: CCCGGGCACGCAGCACCCCCAGCAACCCAGACGGGG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGCAGAGGCGCTGTCTaGGGTCGCGGCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGRGAV*GRGPVW
Trigger: CCAGACGGGGCCGCGACCCCAGACAGCGCCTCTGCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGACACTCCTGGTGGTTaGATGGCAGCTCACAACCTC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTDTPGG*MAAHNL
Trigger: GAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCCGCATCTTGGCCTCTaGCTCCCGGCCGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPPHLGL*LPAAAE
Trigger: CTCTGCCGCGGCCGGGAGCCAGAGGCCAAGATGCGG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTGCTTTGCTGGGGGTaGATGCTGCCGACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVLCWG*MLPTCP
Trigger: AGGACAGGTCGGCAGCATCCACCCCCAGCAAAGCAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGGTGTCCCGTGGGGTaGAACCTGGGGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGCPVG*NLGLGH
Trigger: GTGGCCCAGCCCCAGGTTTCACCCCACGGGACACCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGAGCCGCGCCCATCTaGAATCACATCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGAAPI*NHISRD
Trigger: GTCTCTGCTGATGTGATTTCAGATGGGCGCGGCTCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTGGGTCCCGGTGTCTTaGCAGCAGTGCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAWVPVS*QQCPGL
Trigger: GAGCCCTGGGCACTGCTGGCAAGACACCGGGACCCA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGGAAGAGCAGGTGCTaGCGGCCGTGTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGKSRC*RPCWWP
Trigger: CGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGGTGGCCTGGCAGGTaGGCCGTTGGGAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRWPGR*AVGRVA
Trigger: AGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTTCCTGGTCGGGGCTaGACTTTGCTAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVPGRG*TLLNSR
Trigger: CCGGGAGTTTAGCAAAGTGCAGCCCCGACCAGGAAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGCCGGGAGGGTCCCTaGAGGACGGAGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGREGP*RTEMLA
Trigger: TGCCAGCATCTCCGTCCTGCAGGGACCCTCCCGGCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTATCGGCTGTGGGCCCTaGTGCTGTCCTCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAIGCGP*CCPPQA
Trigger: AGCCTGCGGAGGACAGCAGCAGGGCCCACAGCCGAT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGGCGACAGCGCTGCTaGCCTCCAGGCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGRQRC*PPGLRA
Trigger: TGCCCGGAGGCCTGGAGGGCAGCAGCGCTGTCGCCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCGCCCCGCCCAGGTGTaGCAGCAGCTCCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSRPAQV*QQLPVL
Trigger: GAGCACGGGGAGCTGCTGGCACACCTGGGCGGGGCG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGTACTCGCGGAGCCTaGGGTCCTCAGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRTRGA*GPQLRA
Trigger: GGCCCGGAGCTGAGGACCGCAGGCTCCGCGAGTACG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCTCGGGGAGCTCCATaGCCTGGGCCTGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPRGAP*PGPGRQ
Trigger: CTGGCGGCCAGGCCCAGGCCATGGAGCTCCCCGAGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCTGGCCTCTCAGGGATaGGGGCTTGAGCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALASQG*GLELPV
Trigger: GACGGGGAGCTCAAGCCCCCATCCCTGAGAGGCCAG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTAGGGGGCCGGGGAGCTaGCTTTCCTCTGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPRGPGS*LSSELG
Trigger: CCCCAGCTCAGAGGAAAGCCAGCTCCCCGGCCCCCT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCCCTCGTGGGGGAATaGGGTCTCCTCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAALVGE*GLLQAL
Trigger: CAGTGCCTGGAGGAGACCCCATTCCCCCACGAGGGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCAGGGAACGCGTTTTaGGCCTGCCTCGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPGNAF*ACLGLG
Trigger: GCCCAGCCCGAGGCAGGCCCAAAACGCGTTCCCTGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGCTGCCTGCCCTGGCTaGGCGCATCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSAACPG*AHPPRW
Trigger: CCACCGAGGCGGATGCGCCCAGCCAGGGCAGGCAGC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGCAGGGGCCCCTCGGTaGGGCTGGTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSAGAPR*GWSAVP
Trigger: CGGCACAGCAGACCAGCCCCACCGAGGGGCCCCTGC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGTTGTCCGTGCCCCCTaGGCTCACCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAVVRAP*AHPVLW
Trigger: CCAGAGAACGGGGTGAGCCCAGGGGGCACGGACAAC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCCCAGTATCTGTCGTaGCTTGGACGCCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPQYLS*LGRHLP
Trigger: AGGCAGATGGCGTCCAAGCCACGACAGATACTGGGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGGAGAATACGAGGAGTaGCCCCTGGGCATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEGEYEE*PLGILS
Trigger: TGACAGGATGCCCAGGGGCCACTCCTCGTATTCTCC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGCTGCTTGGGGCTGTaGTTCTTCCCAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWECCLGL*FFPSPV
Trigger: GACTGGGCTTGGGAAGAACCACAGCCCCAAGCAGCA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGTGGCCGGTGCTTCCTaGCCTTGTGCCGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGVAGAS*PCAGSG
Trigger: GCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCAC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGGCCTTCAGGCCCCTaGACTCCACCCTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGPSGP*TPPWVS
Trigger: AGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGCGGCGCGGGCGTGTaGGCCAGCTTGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGGAGV*ASLCRS
Trigger: GGACCTGCACAAGCTGGCCCACACGCCCGCGCCGCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGAGCGCTTGCCCCTGTaGTGTTTGGGCGCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAERLPL*CLGAGS
Trigger: GGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCCTGCGCCGTTTGCTaGGCAGTGTGCCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPCAVC*AVCPRG
Trigger: CCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGTGCAGGGCTCCGGCTaGGGAAGCTGGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPVQGSG*GSWAWL
Trigger: CAGCCAAGCCCAGCTTCCCCAGCCGGAGCCCTGCAC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGTGCAGCTCTTGGCTTaGGCTCGAGCGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAVQLLA*ARAGSL
Trigger: GAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCAC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTAGGGCCCGCGGGAGCTaGCACAGGGGCGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPRARGS*HRGGFF
Trigger: GAAGAAACCGCCCCTGTGCCAGCTCCCGCGGGCCCT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCGGGGGCCCCTCAGCTaGGTCGCCGCACAACTTCCT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGRGPLS*VAAQLP
Trigger: AGGAAGTTGTGCGGCGACCCAGCTGAGGGGCCCCCG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGTCCTGAGTGGAGCCTaGGGAGTCGGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGVLSGA*GVGGPS
Trigger: TGAGGGGCCCCCGACTCCCCAGGCTCCACTCAGGAC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR TCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGAGCCCCGTCACCCTaGAATGCCAAGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGAPSP*NAKSGA
Trigger: GGCCCCTGACTTGGCATTTCAGGGTGACGGGGCTCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGGACTGGCATTGACTaGGGCGTGGTTGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGTGID*GVVVRA
Trigger: GGCACGGACAACCACGCCTCAGTCAATGCCAGTCCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCAGGCGGTGGCTGGGTaGCGTGGCTGGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEQAVAG*RGWGLP
Trigger: GGGGAGACCCCAGCCACGTCACCCAGCCACCGCCTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTGGGCGCGGGTTCCGTaGTGCTGTTCAGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAWARVP*CCSEGG
Trigger: CCCACCTTCTGAACAGCATCACGGAACCCGCGCCCA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTCACCACCTCAGCTCTaGCATCAAGGCCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWESPPQL*HQGLSS
Trigger: ACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTAACGCGTTTTGGGCCTaGCTCGGGCTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRNAFWA*LGLGSP
Trigger: GGGGCTGCCCAGCCCGAGGCAGGCCCAAAACGCGTT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGCTGGGCGGCGGCTaGTCTGGTATCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLLGGG*SGIRRP
Trigger: CGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCGGTGGGGCTGGTCTaGTGTGCCGGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSVGLV*CAGLWE
Trigger: CTCCCAGAGCCCGGCACAGCAGACCAGCCCCACCGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGATGGACAGCAGGGCTaGCAAAAGCTTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEDGQQG*QKLLEQ
Trigger: CTGCTCCAGAAGCTTTTGGCAGCCCTGCTGTCCATC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGCCCCAGTCTCCCCTaGACACAGAGCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGPSLP*TQSLLV
Trigger: GACCAGGAGGCTCTGTGTGCAGGGGAGACTGGGGCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTTGCTGGGGGTGCTaGGTGCCCGGGGTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGCWGC*VPGVSP
Trigger: GGGCGAAACCCCGGGCACGCAGCACCCCCAGCAACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTACAGCGGCGTGTGCTaGAGCTCCGGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRYSGVC*SSGRSS
Trigger: GCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCAGGCTTGGTGGCGCTaGCCTTGTGGAAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGQAWWR*PCGRRL
Trigger: GAGGCGCCTTCCACAAGGGCAGCGCCACCAAGCCTG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGAGGAGGCCTGTTGTaGTCTTGGGGGACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGGGLL*SWGTRR
Trigger: CCGCCTGGTCCCCCAAGAGCACAACAGGCCTCCTCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGCCGCCAGCCTCCCTaGCACCCTTGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGRQPP*HPWWSW
Trigger: CCAGGACCACCAAGGGTGCCAGGGAGGCTGGCGGCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGTGCTGCTCGGGGCCTaGCCTCTCAGGGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSVLLGA*PLRDGG
Trigger: GCCCCCATCCCTGAGAGGCCAGGCCCCGAGCAGCAC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGTGTCTCGTCCAGGGTaGGCTTGGTCCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAVSRPG*AWSSSW
Trigger: CCAGCTCGAGGACCAAGCCCACCCTGGACGAGACAC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCGGAGGCCCCGGGCTaGTGTCCACCCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPEAPG*CPPHWL
Trigger: GAGCCAGTGGGGTGGACACCAGCCCGGGGCCTCCGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTAGGCTGGGTGTCCCGTaGGGTGAAACCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGRLGVP*GETWGW
Trigger: CCAGCCCCAGGTTTCACCCCACGGGACACCCAGCCT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGGAGAAGTGGTGTGTaGGGTACGGAGGCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGRSGV*GTEAAH
Trigger: GTGCGCCGCCTCCGTACCCCACACACCACTTCTCCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTAGCAGCACGTCCAGCTaGTCCAGGCTGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPSSTSS*SRLALL
Trigger: CAGCAGCGCCAGCCTGGACCAGCTGGACGTGCTGCT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCCAGGGAACGCGTTTTaGGCCTGCCTCGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRPGNAF*ACLGLG
Trigger: GCCCAGCCCGAGGCAGGCCCAAAACGCGTTCCCTGG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGCTCCTTGGCCTCCTaGGGAAAGTCCAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGSLAS*GKSSDG
Trigger: CCCGTCGCTGGACTTTCCCCAGGAGGCCAAGGAGCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCAGGCTGCCCACACCTaGCGTTGGCGAGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGQAAHT*RWRASV
Trigger: CACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCTGTTGTGGGAGACTaGGGCCTGTGTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAVVGD*GLCAPR
Trigger: CCTGGGGGCACACAGGCCCCAGTCTCCCACAACAGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGATGCAGCCCTGCCTaGCTCCGTCTCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRCSPA*LRLSGA
Trigger: GGCACCGCTGAGACGGAGCCAGGCAGGGCTGCATCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTGGGGCACGGTGGCCTaGCAGGTGCGCCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWWGTVA*QVRRWE
Trigger: CTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGAGAACGTGTCCTCGTaGGGCACGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGENVSS*GTVAWQ
Trigger: CTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGAAGTCAGGGGCCAGATaGACAGCAGGGCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEKSGAR*TAGLPK
Trigger: TTTTGGCAGCCCTGCTGTCCATCTGGCCCCTGACTT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCTGGACGCCCTCTCTaGAGTCCGGCCCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPAGRPL*SPALRS
Trigger: GGATCTGAGGGCCGGACTCCAGAGAGGGCGTCCAGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCCCTGTGGCCAGCAGTaGCTTGTTCAGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPPCGQQ*LVQAGA
Trigger: AGCCCCGGCCTGAACAAGCCACTGCTGGCCACAGGG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCCTGCTCTGGGGGTCTaGCCCTGGGAGTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSPALGV*PWESPA
Trigger: GGCAGGGGACTCCCAGGGCCAGACCCCCAGAGCAGG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCTGCTCTGGGGGTCTaGCCCTGGGAGTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPALGV*PWESPA
Trigger: GGCAGGGGACTCCCAGGGCCAGACCCCCAGAGCAGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTACAGCTGTGACAGCCTaGCCCTCCCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPTAVTA*PSLWPR
Trigger: CCTCGGCCACAGGGAGGGCCAGGCTGTCACAGCTGT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGCCATTGCAGGGGATaGTCTGGAGCCGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGHCRG*SGAAPI
Trigger: GATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCGCCCTCCTCAAAGCTaGGCTGGGTTGGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPRPPQS*AGLAAG
Trigger: TCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGTCGCGGCCCCGTCTaGGTTGCTGGGGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGRGPV*VAGGAA
Trigger: CGCAGCACCCCCAGCAACCCAGACGGGGCCGCGACC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGCACTGCCGGGCATaGCCACCCTGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGHCRA*PPCAVC
Trigger: GCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTCTCGGGCCATCCCTTaGTGGTGCTGGGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWASRAIP*WCWEPP
Trigger: AGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGCGGGGGACACTCCTaGTGGTTGGATGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGGGHS*WLDGSS
Trigger: TGAGCTGCCATCCAACCACCAGGAGTGTCCCCCGCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGGCTTCCACTGCCCTaGGAGCTGGGGCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGLPLP*ELGPGL
Trigger: CAAACCCGGCCCCAGCTCCCAGGGCAGTGGAAGCCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCAGCGGGGAGCCTCTCTaGTGCAGGGCTCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSSGEPL*CRAPAG
Trigger: CCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCCGCT...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTCGGGAGCACGCGGCTaGGAGTTGCCTGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGSGARG*ELPASE
Trigger: CTCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCACAAGAAGTCAAGTaGCCACAGAGTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTAQEVK*PQSGPS
Trigger: AGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGCGGCCATGGAGGCTaGGAGGGAACGAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGGHGG*EGTRRA
Trigger: GGCCCTCCTCGTTCCCTCCCAGCCTCCATGGCCGCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCTCATGGTCCTGAGTaGAGCCTGGGGAGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAHGPE*SLGSRG
Trigger: CCCCCGACTCCCCAGGCTCCACTCAGGACCATGAGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTAAGAGAGGGCACCACTaGGGTCGCTGTGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAKRGHH*GRCGGS
Trigger: TGAACCGCCACAGCGACCTCAGTGGTGCCCTCTCTT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCGTGTTGGTGGCCGGTaGCGGCAGTGGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWRVGGR*RQWGLA
Trigger: AGCGAGTCCCCACTGCCGTCACCGGCCACCAACACG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCGCGAAGACGTCGATaGAGCTGCTGTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPRRRR*SCCRSP
Trigger: CGGAGATCGACAGCAGCTTCATCGACGTCTTCGCGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTCTGAGAACCTCCTTTaGGCCCTGGGCAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPSENLL*ALGRRW
Trigger: CCACCGCCTGCCCAGGGCTCAAAGGAGGTTCTCAGA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCTCTGTGGCCCCTGTaGGCTCGCCGTGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWALWPL*ARRALE
Trigger: TTCGAGGGCACGGCGAGCTCACAGGGGCCACAGAGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGATGGTGGGGCCTCCCTaGCCCCGTCTGTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWMVGPP*PRLSHP
Trigger: TGGGTGGGACAGACGGGGTCAGGGAGGCCCCACCAT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGTGTCTTGCCAGCAGTaGCCAGGGCTCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPVSCQQ*PGLLGC
Trigger: GCAGCCAAGGAGCCCTGGGCACTGCTGGCAAGACAC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGCTCCCAGCCCATCTaGGGGAAAAGGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGSQPI*GKREGL
Trigger: AAGGCCTTCCCTTTTCCCGCAGATGGGCTGGGAGCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCAGGGGGTCGTCTTTaGCCTCGGCCTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSGGRL*PRPGRP
Trigger: GGGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCCCGCGGCGGAGGCTaGTCGTCCTCCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPRGGG*SSSSDS
Trigger: GGAGTCCGAGGAGGACGAGCAGCCTCCGCCGCGGGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGAGGGTGGCTCTGTaGCTGTGCCGAGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGRVAL*LCRAPP
Trigger: GGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCGCGTGAGGTCAGCTaGCGAGAACGTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAREVS*RERVLV
Trigger: CACGAGGACACGTTCTCGGCAGCTGACCTCACGCGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGTGCCCACCTGCTCTaGCTGCAGAATGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGAHLL*LQNVPG
Trigger: CCCAGGGACATTCTGCAGGCAGAGCAGGTGGGCACC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGTGCCCACCTGCTCTaGCTGCAGAATGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGAHLL*LQNVPG
Trigger: CCCAGGGACATTCTGCAGGCAGAGCAGGTGGGCACC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGTCCCCGACAGAGGGTaGTGGGCTATCCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRVPDRG*WAIPCG
Trigger: GCCACAGGGGATAGCCCAGCACCCTCTGTCGGGGAC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTCTTCCAGGGGGCTaGCCTCCCCCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGLPGG*PPPGEG
Trigger: GCCTTCTCCAGGGGGAGGGCAGCCCCCTGGAAGACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTGCTTCCTGGCCTTGTaGCGGCTCAGGCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSECFLAL*RLRPGP
Trigger: CGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGTGTGGGCCAGCTTGTaGAGGTCCAGCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRVWASL*RSSSPR
Trigger: CCTGGGCGAGCTGGACCTGCACAAGCTGGCCCACAC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGCGACAGCGCTGCTaGCCTCCAGGCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGRQRC*PPGLRA
Trigger: TGCCCGGAGGCCTGGAGGGCAGCAGCGCTGTCGCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGGTGGGCGACAGCGCTaGTGCCCTCCAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLGGRQR*CPPGLR
Trigger: CCGGAGGCCTGGAGGGCAGCAGCGCTGTCGCCCACC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCGGCCCCGTCTGGGTTaGTGGGGGTGCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRPRLG*WGCCVP
Trigger: GGGCACGCAGCACCCCCAGCAACCCAGACGGGGCCG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGCCCCGCCCAGGTGTaGCAGCAGCTCCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRPAQV*QQLPVL
Trigger: GAGCACGGGGAGCTGCTGGCACACCTGGGCGGGGCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGTTTGCTGGGCAGTGTaGCCTCGAGGGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSVCWAV*PRGPGP
Trigger: AGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAAC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTCTCGCTCTGGAGCTaGCCGCTGGCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVSLWS*PLAGWG
Trigger: GCCCCAGCCAGCCAGCGGGCAGCTCCAGAGCGAGAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGGAGCCTCTCTGGTaGAGGGCTCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGEPLW*RAPAGE
Trigger: TTCCCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCTGGGGGAAGGCCTTaGCCAGTCTGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPGGRP*PVCPSS
Trigger: AGAGGAAGGACAGACTGGGCAAGGCCTTCCCCCAGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCATGCAGGTGCCCGTaGCCTCGACAAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPCRCP*PRQAMV
Trigger: CACCATGGCTTGTCGAGGGCACGGGCACCTGCATGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCCTGGGTTGGGTCGGTaGATGAGGGTGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRPGLGR*MRVPWP
Trigger: TGGCCAGGGCACCCTCATGCACCGACCCAACCCAGG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGTGCCCCGGGCTGCTaGCAACTTGGCGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGAPGC*QLGGAA
Trigger: TGCAGCCCCGCCAAGTTGCCAGCAGCCCGGGGCACC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTCCTCCAGTGGCGGCTaGGAGGGGTGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHSSSGG*EGCPGL
Trigger: CAGCCCGGGGCACCCCTCCCAGCCGCCACTGGAGGA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGCAGCCTCCAGCTGTaGGTTCTCTGGTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGSLQL*VLWCLV
Trigger: GACGAGACACCAGAGAACCCACAGCTGGAGGCTGCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCTTCGGCGGCGGGTTaGGCCTCAGTCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSSAAG*ASVLGR
Trigger: CCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCCGGGAAGGGGAACTaGAAGGAAACTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAGKGN*KETPLG
Trigger: CCCCAGGGGAGTTTCCTTCCAGTTCCCCTTCCCGGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCCGGGAAGGGGAACTaGAAGGAAACTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPAGKGN*KETPLG
Trigger: CCCCAGGGGAGTTTCCTTCCAGTTCCCCTTCCCGGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCCCACTACCCTCGGTaGGGGCAGGCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSHYPR*GQAGCP
Trigger: GGGACACCCAGCCTGCCCCCACCGAGGGTAGTGGGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCACAGAACTGCCGGTaGGCCAGGAAGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPQNCR*ARKAAR
Trigger: CCTGGCGGCCTTCCTGGCCCACCGGCAGTTCTGTGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGAGCGGGAAGGGGGTaGCGGCCAGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGAGRG*RPGWAG
Trigger: TCCTGCCCAGCCTGGCCGCCACCCCCTTCCCGCTCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGCGCATCCGCCTCGGTaGGGGCCAGACCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEAHPPR*GPDPGN
Trigger: GTTCCCTGGGTCTGGCCCCCACCGAGGCGGATGCGC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGGGTCCTTGCTGTTGTaGGAGACTGGGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAGSLLL*ETGACV
Trigger: CACACAGGCCCCAGTCTCCCACAACAGCAAGGACCC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTTCCCAGGCAAAGATaGGGCGGCGCCGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLPRQR*GGAGNH
Trigger: GTGGTTCCCGGCGCCGCCCCATCTTTGCCTGGGAAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCTGGCTGAAGCTGGTTaGCTGTGCCTTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPLAEAG*LCLGPG
Trigger: CCCAGGGCCAAGGCACAGCCAACCAGCTTCAGCCAG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCTGGCCCTCCCTGTaGCCGAGGCGGGCAGTATTG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWAWPSL*PRRAVL
Trigger: CAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGCATTTCTGTGGCTTTaGGGGGAGTCAGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEAFLWL*GESDWK
Trigger: CTTCCAGTCTGACTCCCCCCAAAGCCACAGAAATGC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCCCTGGGCAGGCGGTaGCTGGGTGACGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLALGRR*LGDVAG
Trigger: CCCAGCCACGTCACCCAGCCACCGCCTGCCCAGGGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGCCCTCCTCAAAGCTaGGCTGGGTTGGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRPPQS*AGLAAG
Trigger: TCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTCCCACGGGTCCTCATaGCAGAGGCAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGSHGSS*QRQREL
Trigger: CAGCTCCCTCTGCCTCTGCCATGAGGACCCGTGGGA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCACCAGCTTCCCTGCTaGGCTCCAGGGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSHQLPC*APGPTG
Trigger: GCCTGTGGGCCCTGGAGCCCAGCAGGGAAGCTGGTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGGCCCGCCTGCCCTTaGCCGGCCGGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRPACP*PAGLCL
Trigger: AAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGCGGCGCGGGCGTGTaGGCCAGCTTGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGGAGV*ASLCRS
Trigger: GGACCTGCACAAGCTGGCCCACACGCCCGCGCCGCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCGCACATGTAGCAGGTaGGCGGCGGCGCGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERTCSR*AAARAC
Trigger: ACACGCCCGCGCCGCCGCCCACCTGCTACATGTGCG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCTCGTGCACCGGGGTaGCTTGCAGGAGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPRAPG*LAGGAP
Trigger: GGGAGCCCCTCCTGCAAGCCACCCCGGTGCACGAGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCCCACCGCCTTCCTTaGGTGCACTGGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPHRLP*VHWELE
Trigger: CTCAAGTTCCCAGTGCACCCAAGGAAGGCGGTGGGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGCTTCCACTGCCCTaGGAGCTGGGGCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGLPLP*ELGPGL
Trigger: CAAACCCGGCCCCAGCTCCCAGGGCAGTGGAAGCCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGGGGAAGCTGGGCTTaGCTGGGGTGGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGWGSWA*LGWWLS
Trigger: AGACAGCCACCACCCCAGCCAAGCCCAGCTTCCCCA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCAGGGAGCCGGAGCTaGCCAAGGAGGCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSGSRS*PRRQAE
Trigger: CTCGGCCTGCCTCCTTGGCCAGCTCCGGCTCCCTGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTQISKH*LLWCRC
Trigger: GCACCGACACCACAGAAGCCAATGTTTGGAGATTTG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGCCTGTTGTGCTCTTaGGGGACCAGGCGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGLLCS*GTRRLR
Trigger: TCTGAGCCGCCTGGTCCCCCAAGAGCACAACAGGCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTGCATGAGGGTGCCCTaGCCAGGGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWCMRVP*PGQRLC
Trigger: GCAGAGCCGCTGCCCTGGCCAGGGCACCCTCATGCA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGGGGCCCTGGGGAGTaGGCTGGACGGCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGGPGE*AGRPSS
Trigger: TGAGGATGGCCGTCCAGCCCACTCCCCAGGGCCCCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTCATTCCGTTGTAGGTaGACAGTGCTGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWASFRCR*TVLGSR
Trigger: GCGGCTCCCCAGCACTGTTCACCTACAACGGAATGA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGGGTGTCCCGTGGGGTaGAACCTGGGGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLGCPVG*NLGLGH
Trigger: GTGGCCCAGCCCCAGGTTTCACCCCACGGGACACCC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGGGTGTCCCCACTGTaGGTGCAGGTTACAGCACTG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGVSPL*VQVTAL
Trigger: CAGTGCTGTAACCTGCACTCACAGTGGGGACACCCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTGGCGCTGCAGCTTaGAGGGCTTGGGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGGAAA*RAWGSA
Trigger: AGCGCTTCCCCAAGCCCTTCAAGCTGCAGCGCCACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTCCCCGTCCCTGGCCTaGCTTGGCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPSPSLA*LGWASG
Trigger: CCCCGAGGCCCAGCCAAGGCAGGCCAGGGACGGGGA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCCTCTTCCCAGGGGTaGTGCTCGGGGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSPSSQG*CSGPGL
Trigger: GAGGCCAGGCCCCGAGCAGCACCCCTGGGAAGAGGG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGCTGGCCCCATGCAGTaGCGGGAAGGGGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRAGPMQ*REGELE
Trigger: TTCCAGTTCCCCTTCCCGGCACTGCATGGGGCCAGC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCATTGGTGAATGCGTaGCCAGCCACATCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPLVNA*PATSAG
Trigger: CCCTGCGGATGTGGCTGGGCACGCATTCACCAATGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCCTGCCCTGGAAAGTaGCTCTGGGGTAGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPACPGK*LWGREL
Trigger: TAGCTCCCTACCCCAGAGGCACTTTCCAGGGCAGGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTGGGGTTGGCTGGGCTaGTGGACATCGGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWWGWLG*WTSATG
Trigger: CCCTGTCGCCGATGTCCAGCAGCCCAGCCAACCCCA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGACGGGAAGGGGCTaGCCGTCTCCTGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGTGRG*PSPGGE
Trigger: CTCACCCCCAGGAGACGGGCAGCCCCTTCCCGTCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGGGACGGGAAGGGGCTaGCCGTCTCCTGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLGTGRG*PSPGGE
Trigger: CTCACCCCCAGGAGACGGGCAGCCCCTTCCCGTCCC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTGCGGTCACACTGCCTaGAGGTCAGCAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPCGHTA*RSAARP
Trigger: TGGACGTGCTGCTGACCTGCAGGCAGTGTGACCGCA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGACCCCGACCCCTCTaGTGCGCCGCCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPRPRPL*CAARVQ
Trigger: CTGGACTCGGGCGGCGCAGCAGAGGGGTCGGGGTCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCAGACTGGGGCCTGTGTaGCCCCAGGACCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSRLGPV*PQDHPA
Trigger: TGCTGGGTGGTCCTGGGGGCACACAGGCCCCAGTCT...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCCCACGTGTGTCTTTaGTCCTTTGCAGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPHVCL*SFAADF
Trigger: AAAGTCAGCTGCAAAGGAGCAAAGACACACGTGGGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGGTGGCCTGGCAGGTaGGCCGTTGGGAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRWPGR*AVGRVA
Trigger: AGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCGCACCCTCCCGATGTaGAGTGGATTCTCCAACGCG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGRTLPM*SGFSNA
Trigger: CGCGTTGGAGAATCCACTGCACATCGGGAGGGTGCG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTACAGGGGAGAAGGGCTaGATGTCCCGGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWATGEKG*MSRMEG
Trigger: TCCTTCCATCCGGGACATGCAGCCCTTCTCCCCTGT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGGAGAGTTGTCACCTaGACACCCCCTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGRVVT*TPPGEP
Trigger: GGGCTCCCCAGGGGGTGTGCAGGTGACAACTCTCCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGAACAGGCCAGCAGCTaGTGGGGGCCGGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLEQASS*WGPGGS
Trigger: GGACCCTCCCGGCCCCCAGCAGCTGCTGGCCTGTTC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTGCCTCTTCCAGAGGTaGCCAGGCAGGAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPCLFQR*PGRRTG
Trigger: GCCTGTTCTCCTGCCTGGGCACCTCTGGAAGAGGCA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTGCTTCCTGGCCTTGTaGCGGCTCAGGCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLCFLAL*RLRPGP
Trigger: CGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCCCGGGTGTGGCCGGTaGTTCCTGGCCTTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHPGCGR*FLALCR
Trigger: CCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGTGGCTCGGAGAGGCTaGGTAACTGGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGVARRG*VTGHCR
Trigger: CCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCAC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGACTCGGGCAGACCTaGGGGATCCTCGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGLGQT*GILVLP
Trigger: TGGGAGGACGAGGATCCCGCAGGTCTGCCCGAGTCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGCCGCTGGGACCATGTaGAGCTCAGGAATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRAAGTM*SSGMAS
Trigger: GGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTGTAGGAGGCCCGCCTaGCCTTGGCCGGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWCRRPA*PWPAGL
Trigger: GAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCCAGGGCCCGGCCTTaGTCTGCGCGTGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPRARP*SARASP
Trigger: AGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCAGGGCCCGGCCTTaGTCTGCGCGTGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPRARP*SARASP
Trigger: AGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCAAGGACCTCCGCGCCTaGCCCCTGCGGGCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPKDLRA*PLRAKR
Trigger: CCGCTTCGCCCGCAGGGGGCAGGCGCGGAGGTCCTT...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGTGGGCGACAGCGCTaGTGCCCTCCAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGGRQR*CPPGLR
Trigger: CCGGAGGCCTGGAGGGCAGCAGCGCTGTCGCCCACC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGCTGGGGGTGCTGCGTaGCCGGGGTTTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLAGGAA*PGFRPL
Trigger: GAGAGGGCGAAACCCCGGGCACGCAGCACCCCCAGC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTTTGCTGGGCAGTGTaGCCTCGAGGGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVCWAV*PRGPGP
Trigger: AGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCCAGCTCCCCGGGTaGCAGGCTCCCCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGQLPG*QAPHRL
Trigger: AAGGCGGTGGGGAGCCTGGCACCCGGGGAGCTGGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCGAGGGCTTCCACTaGCCTGGGAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGEGFH*PGSWGR
Trigger: CCGGCCCCAGCTCCCAGGGCAGTGGAAGCCCTCGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGTCTCGCTCTGGAGCTaGCCGCTGGCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLVSLWS*PLAGWG
Trigger: GCCCCAGCCAGCCAGCGGGCAGCTCCAGAGCGAGAC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGGGAGCCTCTCTGGTaGAGGGCTCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGEPLW*RAPAGE
Trigger: TTCCCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGTCTCCAGTCATGGTaGGGGGCGGCGCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGLQSW*GAALLG
Trigger: CCCGAGGAGCGCCGCCCCCCACCATGACTGGAGACC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGCCGCCAGCCTCCCTaGCACCCTTGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGRQPP*HPWWSW
Trigger: CCAGGACCACCAAGGGTGCCAGGGAGGCTGGCGGCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCCATGGCCTGGGCCTaGCCGCCAGCCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSMAWA*PPASLA
Trigger: TGCCAGGGAGGCTGGCGGCCAGGCCCAGGCCATGGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGGAGGGTGGCTCCTaGAAGCACCTGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLEGGS*KHLWKP
Trigger: TGGCTTCCACAGGTGCTTCCAGGAGCCACCCTCCAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGAAGGAAACTCCCCTaGGGCTGCCGCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGRKLP*GCRRAC
Trigger: GCAGGCCCGGCGGCAGCCCCAGGGGAGTTTCCTTCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCTGCTTCTCACGGCTaGCAGCTTCTCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPAASHG*QLLSGS
Trigger: GGACCCAGAGAGAAGCTGCCAGCCGTGAGAAGCAGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGTTGGCTGGGCTGCTaGACATCGGCGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGWLGC*TSATGK
Trigger: CTTCCCTGTCGCCGATGTCCAGCAGCCCAGCCAACC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGCCTTGGCTGGCTCTaGCTGGTAGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGLGWL*LVVGGE
Trigger: CTCCCCACCCACTACCAGCCAGAGCCAGCCAAGGCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTAGGGAAGGCCTTGGCTaGCTCTGGCTGGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGREGLG*LWLVVG
Trigger: ACCCACTACCAGCCAGAGCCAGCCAAGGCCTTCCCT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGTCTCCTCCAGGCACTaGAAGGCACCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWVSSRH*KAPSAP
Trigger: GGGAGCCGAGGGTGCCTTCCAGTGCCTGGAGGAGAC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGGGGTGTCCGGAGCTaGGACCTCTGGGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGGVRS*DLWGRK
Trigger: CTTCCGGCCCCAGAGGTCCCAGCTCCGGACACCCCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGAGGTCTCGGTGTTaGTGGGGACCTGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLRSRC*WGPAGD
Trigger: ATCCCCTGCAGGTCCCCACCAACACCGAGACCTCAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGCTCCTTGGCCTCCTaGGGAAAGTCCAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGSLAS*GKSSDG
Trigger: CCCGTCGCTGGACTTTCCCCAGGAGGCCAAGGAGCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGGTGTCATGTCTGCTaGGCGGCGGCTGCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRCHVC*AAAALV
Trigger: TACCAGAGCAGCCGCCGCCCAGCAGACATGACACCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCCCACACCTGGCGTTaGCGAGCTTCCGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSAHTWR*RASVGR
Trigger: GCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGGGTCCTTGCTGTTGTaGGAGACTGGGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPGSLLL*ETGACV
Trigger: CACACAGGCCCCAGTCTCCCACAACAGCAAGGACCC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCCGGCGGGGCATCCCTaGCTGAGGGCTTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHPAGHP*LRAWGA
Trigger: TGCACCCCAAGCCCTCAGCCAGGGATGCCCCGCCGG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGACTCCAAGGTCGGTaGCGATGCAGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGLQGR*RCSPAW
Trigger: CCAGGCAGGGCTGCATCGCCACCGACCTTGGAGTCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGACGGCACCGTCTTCTaGGGAGGGTCGGCACATGCG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWDGTVF*GGSAHA
Trigger: CGCATGTGCCGACCCTCCCCAGAAGACGGTGCCGTC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTGGGGCACGGTGGCCTaGCAGGTGCGCCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSWGTVA*QVRRWE
Trigger: CTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTCCGGCTTTCTGCACTaGCTGAAAATGGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWESGFLH*LKMEVG
Trigger: GCCAACTTCCATTTTCAGCCAGTGCAGAAAGCCGGA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCACCAAAAGGCCAGGTaGCATCCAGAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPHQKAR*HPEVEP
Trigger: GGGCTCCACCTCTGGATGCCACCTGGCCTTTTGGTG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCACCAAAAGGCCAGGTaGCATCCAGAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGHQKAR*HPEVEP
Trigger: GGGCTCCACCTCTGGATGCCACCTGGCCTTTTGGTG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCTGTGCCTTGGCCCTaGGTTTTCTCGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPAVPWP*VFSAWP
Trigger: TGGCCAAGCCGAGAAAACCCAGGGCCAAGGCACAGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCTGGGGGTCTGGCCCTaGGAGTCCCCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLLGVWP*ESPACL
Trigger: CAGGCAGGCAGGGGACTCCCAGGGCCAGACCCCCAG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTCTCAGGGGTCCCTaGGTCCTCCGGCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGLRGP*VLRLLA
Trigger: AGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTGGCCGGTGCTTCCTaGCCTTGTGCCGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVAGAS*PCAGSG
Trigger: GCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGGGGCTCCCGGGTGTaGCCGGTGCTTCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGGSRV*PVLPGL
Trigger: AAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCCCTGGGCAGGCGGTaGCTGGGTGACGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPALGRR*LGDVAG
Trigger: CCCAGCCACGTCACCCAGCCACCGCCTGCCCAGGGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTATGCTCAGTAGGGCTTaGAGGGTGCAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAMLSRA*RVQLLA
Trigger: AGCCAGCAGCTGCACCCTCCAAGCCCTACTGAGCAT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTTGCAGGGGATGGTCTaGAGCCGCGCCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALQGMV*SRAHLK
Trigger: TTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGGCTGGGCCCAGCGTaGGGTCACCGCCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGLGPA*GHRPPQ
Trigger: TTGAGGAGGGCGGTGACCCCACGCTGGGCCCAGCCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCCCACGGGTCCTCATaGCAGAGGCAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSHGSS*QRQREL
Trigger: CAGCTCCCTCTGCCTCTGCCATGAGGACCCGTGGGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGTTCTCTCTCCAGGCTaGGGGGCTCGGGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRVLSPG*GARGSH
Trigger: ATGTGAGCCCCGAGCCCCCCAGCCTGGAGAGAGAAC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCGCACATGTAGCAGGTaGGCGGCGGCGCGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRTCSR*AAARAC
Trigger: ACACGCCCGCGCCGCCGCCCACCTGCTACATGTGCG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGCTTCCCGCAGTGGTaGCAGTCGCGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRFPQW*QSREGS
Trigger: GGACCCCTCCCGCGACTGCCACCACTGCGGGAAGCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCTGTGCACCGCCAGGTaGCGCTGCAGCTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSLCTAR*RCSLKG
Trigger: GCCCTTCAAGCTGCAGCGCCACCTGGCGGTGCACAG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGAGCTGCCCGCTGGCTaGCTGGGGCTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWELPAG*LGLAAT
Trigger: GGTGGCAGCCAGCCCCAGCCAGCCAGCGGGCAGCTC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGCGGGGAGCCTCTCTaGTGCAGGGCTCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSGEPL*CRAPAG
Trigger: CCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCCGCT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCGGCCATGGAGGCTaGGAGGGAACGAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGGHGG*EGTRRA
Trigger: GGCCCTCCTCGTTCCCTCCCAGCCTCCATGGCCGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTGCATGAGGGTGCCCTaGCCAGGGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSECMRVP*PGQRLC
Trigger: GCAGAGCCGCTGCCCTGGCCAGGGCACCCTCATGCA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGCCCCTCCGCACTTaGTTTGCGACACTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGPLRT*FATLRR
Trigger: CCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCCCCCAGGCCTCCCCTaGACCGCTTCCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCPPGLP*TASTVA
Trigger: GGCCACCGTGGAAGCGGTTCAGGGGAGGCCTGGGGG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCCCAGGCCTCCCCTaGACCGCTTCCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPPGLP*TASTVA
Trigger: GGCCACCGTGGAAGCGGTTCAGGGGAGGCCTGGGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGCCCGAAGAGCTGGCTaGGGAGGTCACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEARRAG*GGHSGP
Trigger: AGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCATGGTGGGGCCTCCCTaGCCCCGTCTGTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSMVGPP*PRLSHP
Trigger: TGGGTGGGACAGACGGGGTCAGGGAGGCCCCACCAT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGTTGGGTCGGTGCATaGGGGTGCCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGWVGA*GCPGQG
Trigger: GCCCTGGCCAGGGCACCCTCATGCACCGACCCAACC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGTTGGGTCGGTGCATaGGGGTGCCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGWVGA*GCPGQG
Trigger: GCCCTGGCCAGGGCACCCTCATGCACCGACCCAACC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCCCCGTCCCTGGCCTaGCTTGGCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSPSLA*LGWASG
Trigger: CCCCGAGGCCCAGCCAAGGCAGGCCAGGGACGGGGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGAGCCTTGAGGGAGCCTaGAAGGGGCTTCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSLEGA*KGLLPG
Trigger: ACCGGGGAGAAGCCCCTTGCAGGCTCCCTCAAGGCT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCAGGGAAGGGTTTTGTaGTGGCCCCATGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRQGRVL*WPHAVP
Trigger: CGGCACTGCATGGGGCCAGCACAAAACCCTTCCCTG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGCACGGGGGAAGCCCTaGAGCCCTCCCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCARGKP*SPPRPT
Trigger: GGTGGGTCGGGGAGGGCTGCAGGGCTTCCCCCGTGC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCGGGGGCGGAGCTTTaGTCTCTGGAGTCACCCCCG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHAGAEL*SLESPP
Trigger: CGGGGGTGACTCCAGAGAGCAAAGCTCCGCCCCCGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAACGCGTTTTGGGCCTaGCTCGGGCTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSNAFWA*LGLGSP
Trigger: GGGGCTGCCCAGCCCGAGGCAGGCCCAAAACGCGTT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCGACCCCGACCCCTCTaGTGCGCCGCCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQRPRPL*CAARVQ
Trigger: CTGGACTCGGGCGGCGCAGCAGAGGGGTCGGGGTCG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCCCCGCGGCGGAGGCTaGTCGTCCTCCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQPRGGG*SSSSDS
Trigger: GGAGTCCGAGGAGGACGAGCAGCCTCCGCCGCGGGG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAGACTGGGGCCTGTGTaGCCCCAGGACCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERLGPV*PQDHPA
Trigger: TGCTGGGTGGTCCTGGGGGCACACAGGCCCCAGTCT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGTGGCGATGCAGCCCTaGCTGGCTCCGTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHVAMQP*LAPSQR
Trigger: CCGCTGAGACGGAGCCAGGCAGGGCTGCATCGCCAC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGTTCGCAGACAGGCTaGCATAGAGGGGTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGCSQTG*HRGVGR
Trigger: TCGACCCACCCCTCTATGGCAGCCTGTCTGCGAACA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCACCGACTCAGCTTCTaGAAGCTCTCTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSHRLSF*KLSRGP
Trigger: GGGGCCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGAGGGTGGCTCTGTaGCTGTGCCGAGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGRVAL*LCRAPP
Trigger: GGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGCGTGGTTGTCCGTaGCCCCTGGGCTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRRGCP*PLGSPR
Trigger: ACGGGGTGAGCCCAGGGGGCACGGACAACCACGCCT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTCCCCGACAGAGGGTaGTGGGCTATCCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVPDRG*WAIPCG
Trigger: GCCACAGGGGATAGCCCAGCACCCTCTGTCGGGGAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGAACAGGCCAGCAGCTaGTGGGGGCCGGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPEQASS*WGPGGS
Trigger: GGACCCTCCCGGCCCCCAGCAGCTGCTGGCCTGTTC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGGGGAGACGGCCCCTaGCAGAGGAGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGGDGP*QRRRGG
Trigger: GCCACCTCTCCTCCTCTGGCAGGGGCCGTCTCCCCC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGAAGTCACTGGCTGTaGTGCTTGGGGCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGSHWL*CLGLWF
Trigger: GAACCACAGCCCCAAGCAGCACAGCCAGTGACTTCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGTAGGGCTTGGAGGGTaGAGCTGCTGGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSVGLGG*SCWLCG
Trigger: CCCACACAGCCAGCAGCTGCACCCTCCAAGCCCTAC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTGCGTAACTGGCCATTaGAGGGGATGGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPCVTGH*RGWSGA
Trigger: GGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCCAAGCGAGGCGGCTaGTCCCCGTCAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAKRGG*SPSASG
Trigger: GCCTGAGGCTGACGGGGAGCAGCCGCCTCGCTTGGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGCCCCAGTCTCCCCTaGACACAGAGCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGPSLP*TQSLLV
Trigger: GACCAGGAGGCTCTGTGTGCAGGGGAGACTGGGGCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCGCTCCCAGACTCTTTaGACACACCCAACGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPRSQTL*THPTPW
Trigger: CCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCTGTGGGCCCTGCTaGTGTCCTCCGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGCGPC*CPPQAR
Trigger: GCGAGCCTGCGGAGGACAGCAGCAGGGCCCACAGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCCTTGCTCTGCGCGTaGCTCTCCTGCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHALLCA*LSCRCP
Trigger: GGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCGGCCCCGTCTGGGTTaGTGGGGGTGCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQRPRLG*WGCCVP
Trigger: GGGCACGCAGCACCCCCAGCAACCCAGACGGGGCCG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACGCGGGAGGGGTCCTTaGAGGCCTCGTGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRGRGP*RPRAPG
Trigger: CCCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTACAGCGGCGTGTGCTaGAGCTCCGGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHYSGVC*SSGRSS
Trigger: GCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCATACAGCGGCGTGTaGTGCAGCTCCGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSAYSGV*CSSGRS
Trigger: GGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCGGGCATGGCCACCCTaGGCCGTTTGCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRAWPP*AVCWAV
Trigger: CACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCACTGGGAACTTGAGTaGTTTGCTGGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAHWELE*FAGGGC
Trigger: GCATCCACCCCCAGCAAAGCACTCAAGTTCCCAGTG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCATCCCATTCTCTGTaGCACGGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSSHSL*HGPAPR
Trigger: CCGGGGAGCTGGCCCGTGGCACAGAGAATGGGATGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGCGAGGGCTTCCACTaGCCTGGGAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGEGFH*PGSWGR
Trigger: CCGGCCCCAGCTCCCAGGGCAGTGGAAGCCCTCGCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTCCCGTGGGGCCCCTaGTCACCAGCTTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLPWGP*SPASLG
Trigger: GCCAAGGGAAGCTGGTGAGCAGGGGCCCCACGGGAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGGCTGGGAGTTGCCTaGTTCCGAGGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPRLGVA*FRGVRG
Trigger: CCCCCGGACCCCTCGGAAGCAGGCAACTCCCAGCCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGGCTGCTGGCAACTTaGCGGGGCTGCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGLLAT*RGCRSP
Trigger: TGGAGACCTGCAGCCCCGCCAAGTTGCCAGCAGCCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTGGCCTGCCTTGGCTaGGCCTCGGGGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLACLG*ASGSSM
Trigger: CATGGAGCTCCCCGAGGCCCAGCCAAGGCAGGCCAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCTGGCCTGCCTTGGCTaGGCCTCGGGGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHLACLG*ASGSSM
Trigger: CATGGAGCTCCCCGAGGCCCAGCCAAGGCAGGCCAG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGTGCTGCTCGGGGCCTaGCCTCTCAGGGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPVLLGA*PLRDGG
Trigger: GCCCCCATCCCTGAGAGGCCAGGCCCCGAGCAGCAC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCGTCCAGGGTGGGCTTaGTCCTCGAGCTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERPGWA*SSSWRC
Trigger: GCATCGCCAGCTCGAGGACCAAGCCCACCCTGGACG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTCCTGGAAGCACCTGTaGAAGCCAAGCTCTTCGGCG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPSWKHL*KPSSSA
Trigger: CGCCGAAGAGCTTGGCTTCCACAGGTGCTTCCAGGA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCGGAGGCCCCGGGCTaGTGTCCACCCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPEAPG*CPPHWL
Trigger: GAGCCAGTGGGGTGGACACCAGCCCGGGGCCTCCGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGTAGGTGAACAGTGCTaGGGAGCCGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSVGEQC*GAALAA
Trigger: AGCAGCCAGGGCGGCTCCCCAGCACTGTTCACCTAC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCGTGGGGTGAAACCTaGGGCTGGGCCACCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPWGET*GWATPK
Trigger: CTTCGGGGTGGCCCAGCCCCAGGTTTCACCCCACGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCAGTGGGGACTCGCTaGGGGAGGCTCCCACTACCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAVGTR*GRLPLP
Trigger: GGGTAGTGGGAGCCTCCCCCAGCGAGTCCCCACTGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGGCCTGGAGACCGCTaGTGGCCATCCTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGPGDR*WPSLAL
Trigger: CAGGGCCAAGGATGGCCACCAGCGGTCTCCAGGCCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGGTGGCGGCCAGGCTaGGCAGGAAGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGWRPG*AGSLSS
Trigger: TGAGGACAGGCTTCCTGCCCAGCCTGGCCGCCACCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGGTGGCGGCCAGGCTaGGCAGGAAGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGWRPG*AGSLSS
Trigger: TGAGGACAGGCTTCCTGCCCAGCCTGGCCGCCACCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGGAGCTGGGACCTCTaGGGCCGGAAGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRSWDL*GRKAPR
Trigger: ACGAGGAGCCTTCCGGCCCCAGAGGTCCCAGCTCCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTTTGGGGGTCCGGCGTaGCTGCTGGGAGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQFGGPA*LLGAGA
Trigger: CGCCCCCGCTCCCAGCAGCCACGCCGGACCCCCAAA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGCGGCGGCTGCTCTaGTATCAGGAGACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGRRLL*YQETGA
Trigger: AGCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCGTGGGGCGCCGTGTTaGCGAGGCTTCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWRGAPC*RGFPTA
Trigger: AGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCCCACACCTGGCGTTaGCGAGCTTCCGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAHTWR*RASVGR
Trigger: GCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGCATTGACTGAGGCGTaGTTGTCCGTGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSALTEA*LSVPPG
Trigger: CCCAGGGGGCACGGACAACCACGCCTCAGTCAATGC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGTGCCTCATCTCCGGTaGGAGTGCTGGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWVPHLR*ECWTGQ
Trigger: CTGGCCTGTCCAGCACTCCCACCGGAGATGAGGCAC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCATCCTGTCAGGGTTaGTGTGGGGCGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSASCQG*CGAGLP
Trigger: GGGGAGCCCCGCCCCACACCAACCCTGACAGGATGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCATCCTGTCAGGGTTaGTGTGGGGCGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLASCQG*CGAGLP
Trigger: GGGGAGCCCCGCCCCACACCAACCCTGACAGGATGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCTGCACCCTGTAGCGTaGGAGGCTCAGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSLHPVA*EAQWAQ
Trigger: CTGTGCCCACTGAGCCTCCCACGCTACAGGGTGCAG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGTCACAGGCCCATGTaGAGCTTGGCCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGHRPM*SLALPL
Trigger: CAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGAGAGGCTGCGTAACTaGCCATTGCAGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGERLRN*PLQGMV
Trigger: GACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCAGGTCCCAGAGTaGCCAAGCGAGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPQVPE*PSEAAA
Trigger: AGCAGCCGCCTCGCTTGGCCACTCTGGGACCTGGGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGAGGCCCGCCTGCCCTTaGCCGGCCGGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQRPACP*PAGLCL
Trigger: AAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCCCCGTCTGGGTTGCTaGGGGTGCTGCGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQPRLGC*GCCVPG
Trigger: CCCGGGCACGCAGCACCCCCAGCAACCCAGACGGGG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGCAGAGGCGCTGTCTaGGGTCGCGGCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGRGAV*GRGPVW
Trigger: CCAGACGGGGCCGCGACCCCAGACAGCGCCTCTGCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGACCTCCGAACACAGGTaGAGCAGGGCCGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWTSEHR*SRAGRE
Trigger: CTCTCTCCCGGCCCTGCTCCACCTGTGTTCGGAGGT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTATCCCTTGGTGGTGCTaGGAGCCACCTCCGAACACA +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPIPWWC*EPPPNT
Trigger: TGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGAT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGCGGGGGACACTCCTaGTGGTTGGATGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGGGHS*WLDGSS
Trigger: TGAGCTGCCATCCAACCACCAGGAGTGTCCCCCGCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGAGAGGGAGAGCTTGCTaGAGAAGAGGCCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWRGRAC*RRGPGL
Trigger: CAGCCCCGGGCCTCTTCTCCAGCAAGCTCTCCCTCT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCCTGGGAGCTaGGGCCGGGTTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEHCPGS*GRVWLW
Trigger: CCAAAGCCAAACCCGGCCCCAGCTCCCAGGGCAGTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGTGGCTGTCTCGCTCTaGAGCTGCCCGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSVAVSL*SCPLAG
Trigger: GCCAGCCAGCGGGCAGCTCCAGAGCGAGACAGCCAC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTTCCCTTGGCCCCTTaGTGCAGCTCTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLPLAP*CSSWLG
Trigger: CCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGCCTGTTGTGCTCTTaGGGGACCAGGCGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGLLCS*GTRRLR
Trigger: TCTGAGCCGCCTGGTCCCCCAAGAGCACAACAGGCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCCCTCGACAAGCCATaGTGGGGCCTCCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHALDKP*WGLPDP
Trigger: GGGGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp TGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATaGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGGTGGCANLQT*ASVVSVPTGRR
Trigger: CCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGGTCTTCGCGTGGCTaGGCAAGCCCGCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRSSRG*ASPRVR
Trigger: ACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCGGGCGGGTTTCCTCTaGGGTCTCGGTGTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLRAGFL*GLGVGG
Trigger: CCCACCAACACCGAGACCTCAGAGGAAACCCGCCCG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCTCGGCCTCCTCCTaGAGGCTCATGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGSASS*RLMAAL
Trigger: CAGGGCAGCCATGAGCCTTCAGGAGGAGGCCGAGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCACGGGACCTCTGTTTaGGGTCTTGGGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLHGTSV*GLGGRG
Trigger: CCCTCGGCCCCCAAGACCTCAAACAGAGGTCCCGTG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGGTCTCCCCGTGAGTaGTTTGGTCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGSPRE*FGLSFP
Trigger: TGGGAAGGAGAGACCAAATCACTCACGGGGAGACCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTGCCTTCCGCTGCTCTaGTGGTGGCGGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSECLPLL*WWRPGF
Trigger: AAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGAGCCCTCTCACCCTTTaGCCCACCTTCACAGGCACG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSPLTL*PTFTGT
Trigger: CGTGCCTGTGAAGGTGGGTCAAAGGGTGAGAGGGCT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCAAACTCCCCTGGGGCTaGCGCCGGGCCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPKLPWG*RRACCL
Trigger: AAGGCAGCAGGCCCGGCGGCAGCCCCAGGGGAGTTT...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGTTGTAGGTGAACAGTaGTGGGGAGCCGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSVVGEQ*WGAALA
Trigger: AGCCAGGGCGGCTCCCCAGCACTGTTCACCTACAAC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCCCCGCCGGCTTCCTaGCTCGCCGCCTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSPPAS*LAAFRG
Trigger: ACCCCGGAAGGCGGCGAGGCAGGAAGCCGGCGGGGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCTGCTGGGCGGCGGCTaGTCTGGTATCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHLLGGG*SGIRRP
Trigger: CGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGCAAAGGCAGGAGCTaGTGGCCGGCGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGKGRS*WPAGHP
Trigger: GGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCTCCGTCTCAGCGGTaGCAGGTGGGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSAPSQR*QVGSLA
Trigger: TGCCAAGGAGCCCACCTGGCACCGCTGAGACGGAGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGAGGGTCGGCACATaGGAACGGCAGACCGGAGTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGRVGT*ERQTGV
Trigger: GACTCCGGTCTGCCGTTCGCATGTGCCGACCCTCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACCGACTCAGCTTCTaGAAGCTCTCTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEHRLSF*KLSRGP
Trigger: GGGGCCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGTGGGCCAGGCTGCTTaGTGGGCTCAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSVGQAA*WAQAGR
Trigger: TCTGCCTGCCTGAGCCCAGCAAGCAGCCTGGCCCAC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCGGTGGGGCTGGTCTaGTGTGCCGGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSVGLV*CAGLWE
Trigger: CTCCCAGAGCCCGGCACAGCAGACCAGCCCCACCGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCCCAATGTCCATCTaGCTCCAGCCCCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWAPMSI*LQPQLM
Trigger: CATCAGCTGGGGCTGGAGGCAGATGGACATTGGGGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTGCCTCTTCCAGAGGTaGCCAGGCAGGAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWCLFQR*PGRRTG
Trigger: GCCTGTTCTCCTGCCTGGGCACCTCTGGAAGAGGCA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGTCTTCCAGGGGGCTaGCCTCCCCCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGLPGG*PPPGEG
Trigger: GCCTTCTCCAGGGGGAGGGCAGCCCCCTGGAAGACC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTAGTCACTGGCTGTGCTaGTTGGGGCTGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGSHWLC*LGLWFF
Trigger: GAAGAACCACAGCCCCAAGCAGCACAGCCAGTGACT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCGGGTGTGGCCGGTaGTTCCTGGCCTTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPGCGR*FLALCR
Trigger: CCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCATCGGCTGTGGGCCCTaGTGCTGTCCTCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLIGCGP*CCPPQA
Trigger: AGCCTGCGGAGGACAGCAGCAGGGCCCACAGCCGAT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGTGTGGGCCAGCTTGTaGAGGTCCAGCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSVWASL*RSSSPR
Trigger: CCTGGGCGAGCTGGACCTGCACAAGCTGGCCCACAC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCGAAGCGGACCGCGTaGTCACGCAGGTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSAKRTA*SRRCSL
Trigger: CAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCTGGGGGTGCTGCGTaGCCGGGGTTTCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAGGAA*PGFRPL
Trigger: GAGAGGGCGAAACCCCGGGCACGCAGCACCCCCAGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTGGCGAAGGTGTAGTTaGAGGAGCTGCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRWRRCS*RSCRRR
Trigger: CCTTCGCCTGCAGCTCCTGCAACTACACCTTCGCCA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCACCCTGCGCCGTTTaGTGGGCAGTGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPPCAV*WAVCPR
Trigger: TCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCAGGCTTGGTGGCGCTaGCCTTGTGGAAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLQAWWR*PCGRRL
Trigger: GAGGCGCCTTCCACAAGGGCAGCGCCACCAAGCCTG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGGCTCTGCCTTCCGCTaGTCTGATGGTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLGSAFR*SDGGGL
Trigger: CAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGCTCTGCCTTCCGCTaGTCTGATGGTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGSAFR*SDGGGL
Trigger: CAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGGAGAGCGCCGCCATaGAGGTGCCCGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGRAPP*RCPCPR
Trigger: TCGAGGGCACGGGCACCTGCATGGCGGCGCTCTCCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGGAGAGCGCCGCCATaGAGGTGCCCGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGRAPP*RCPCPR
Trigger: TCGAGGGCACGGGCACCTGCATGGCGGCGCTCTCCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTCCATGGCCTGGGCCTaGCCGCCAGCCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSMAWA*PPASLA
Trigger: TGCCAGGGAGGCTGGCGGCCAGGCCCAGGCCATGGA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGGAGCTCCATGGCCTaGGCCTGGCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGSSMA*AWPPAS
Trigger: GGAGGCTGGCGGCCAGGCCCAGGCCATGGAGCTCCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCAGCTGTGGGTTCTCTaGTGTCTCGTCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSQLWVL*CLVQGG
Trigger: CCCACCCTGGACGAGACACCAGAGAACCCACAGCTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGAAGGAAACTCCCCTaGGGCTGCCGCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGRKLP*GCRRAC
Trigger: GCAGGCCCGGCGGCAGCCCCAGGGGAGTTTCCTTCC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCCCCCAGGAGGTGTaGGGTAAGGGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGPQEV*GKGLLW
Trigger: CCACAGCAGCCCCTTACCCCACACCTCCTGGGGGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAGCATCTCCATTCCGTaGGGACTTGGCCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSESISIP*GLGRAV
Trigger: GACCGCCCGGCCAAGTCCCCACGGAATGGAGATGCT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTCGGTGGGGGCAGGCTaGGTGTCCCGTGGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHSVGAG*VSRGVK
Trigger: TTTCACCCCACGGGACACCCAGCCTGCCCCCACCGA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTCGGTGGGGGCAGGCTaGGTGTCCCGTGGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSVGAG*VSRGVK
Trigger: TTTCACCCCACGGGACACCCAGCCTGCCCCCACCGA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGGAGAAGTGGTGTGTaGGGTACGGAGGCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGRSGV*GTEAAH
Trigger: GTGCGCCGCCTCCGTACCCCACACACCACTTCTCCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCCATCCTTGGCCCTaGCCAGGAGCAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGHPWP*PGAGHR
Trigger: TCTGTGGCCTGCTCCTGGCCAGGGCCAAGGATGGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGCCATCCTTGGCCCTaGCCAGGAGCAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGHPWP*PGAGHR
Trigger: TCTGTGGCCTGCTCCTGGCCAGGGCCAAGGATGGCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGAGGAAGGTCTTCGCGTaGCTGAGCAAGCCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWRKVFA*LSKPAC
Trigger: ACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTCTGCTGCCTGCCCTaGCTGGGCGCATCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLCCLP*LGASAS
Trigger: CGAGGCGGATGCGCCCAGCCAGGGCAGGCAGCAGAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCCTCTCTGGGACCCTaGGTCAGCTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSSLGP*VSSTSF
Trigger: GAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGCGATCAGCACACTTaGGGCCTCCCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGDQHT*GLPPWR
Trigger: CCGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCTTCCCGACGGCTTaGGGGTGCCGGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGFPTA*GCRCHV
Trigger: GACATGACACCGGCACCCCCAAGCCGTCGGGAAGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGCTCCTTGGCAGCTGTaGCTCGAGGGAACCGGCATC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEAPWQL*LEGTGI
Trigger: GATGCCGGTTCCCTCGAGCCACAGCTGCCAAGGAGC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCGATGCAGCCCTGCCTaGCTCCGTCTCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWRCSPA*LRLSGA
Trigger: GGCACCGCTGAGACGGAGCCAGGCAGGGCTGCATCG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCTGCCATAGAGGGGTaGGTCGAATCTGTCCACCGG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWAAIEG*VESVHR
Trigger: CCGGTGGACAGATTCGACCCACCCCTCTATGGCAGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTGGCAGGTGCGCCGTTaGGAGGGTGGCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHWQVRR*EGGSVP
Trigger: AGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCCTCGTGGGGCACGGTaGCCTGGCAGGTGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCPRGAR*PGRCAV
Trigger: AACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCCCCTCGGTGGGGCTaGTCTGCTGTGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKAPRWG*SAVPGS
Trigger: AGAGCCCGGCACAGCAGACCAGCCCCACCGAGGGGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTGGCATCCAGAGGTaGAGCCCCGTCACCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGGIQR*SPVTLK
Trigger: TTTCAGGGTGACGGGGCTCCACCTCTGGATGCCACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCTGGGCAGCATGGCTaGGACTGGCACCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPGQHG*DWHQKA
Trigger: GGCCTTTTGGTGCCAGTCCCAGCCATGCTGCCCAGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCTCAAAGCTGGGTCCTaGGACCTCCTGCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSLKAGS*DLLLGW
Trigger: CCACCCTAGCAGGAGGTCCCAGGACCCAGCTTTGAG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCTGGACGCCCTCTCTaGAGTCCGGCCCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAGRPL*SPALRS
Trigger: GGATCTGAGGGCCGGACTCCAGAGAGGGCGTCCAGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCAGCCAGGGCTTCCTTaGGATCGCAGGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWQPGLP*DRRGLL
Trigger: CAACAAGCCCCTGCGATCCCAAGGAAGCCCTGGCTG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGAGGAGGAGAGGTaGCTCGGCCAGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPEEER*LGQETP
Trigger: GGGAGTCTCCTGGCCGAGCCACCTCTCCTCCTCTGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCAGAGGAGGAGAGGTaGCTCGGCCAGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSPEEER*LGQETP
Trigger: GGGAGTCTCCTGGCCGAGCCACCTCTCCTCCTCTGG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTGCCTCATCTCCGGTaGGAGTGCTGGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVPHLR*ECWTGQ
Trigger: CTGGCCTGTCCAGCACTCCCACCGGAGATGAGGCAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCACAGCTGTGACAGCCTaGCCCTCCCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLTAVTA*PSLWPR
Trigger: CCTCGGCCACAGGGAGGGCCAGGCTGTCACAGCTGT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGTGGCTTTTCTTCCTaGGCGGCTGGCACTTTTGGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGCGFSS*AAGTFG
Trigger: CCCAAAAGTGCCAGCCGCCCAGGAAGAAAAGCCACA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTACACACCCAACGCCTTaGTCTCTCTTGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGTHPTP*SLLVPR
Trigger: TCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTTGTCCGGGAGGCCCTaGAGGCAGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLSGRP*RQLLVV
Trigger: CACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTTGTCCGGGAGGCCCTaGAGGCAGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHLSGRP*RQLLVV
Trigger: CACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGGCCTTCAGGCCCCTaGACTCCACCCTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGPSGP*TPPWVS
Trigger: AGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTAGCTTGGAGGATCCTTaGCACTGGAGCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGSLEDP*HWSQRH
Trigger: ATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTCGTCCTCGGGGCAGTaGGAGGGCAGCTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSESSSGQ*EGSFSA
Trigger: TGCAGAGAAGCTGCCCTCCCACTGCCCCGAGGACGA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCCTCGCCAAGCCGCTaGGACCATGTGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSASPSR*DHVQLR
Trigger: CCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAGGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGGAGCGGCAGCAGGTaGGTGTTCCCGGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPRSGSR*VFPGSP
Trigger: TGGGCTTCCCGGGAACACCCACCTGCTGCCGCTCCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGTCGCGGCCCCGTCTaGGTTGCTGGGGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGRGPV*VAGGAA
Trigger: CGCAGCACCCCCAGCAACCCAGACGGGGCCGCGACC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTATCCCTTGGTGGTGCTaGGAGCCACCTCCGAACACA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRIPWWC*EPPPNT
Trigger: TGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGAT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGGGCCATCCCTTGGTaGTGCTGGGAGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPRAIPW*CWEPPP
Trigger: CGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTTTCCCTCCGCATCTTaGCCTCTGGCTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSFPSAS*PLAPGR
Trigger: GCGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTAGCCCGCAGGCTTGGTaGCGCTGCCCTTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSPQAW*RCPCGR
Trigger: CCTTCCACAAGGGCAGCGCCACCAAGCCTGCGGGCT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCACTGCCCTGGGAGCTaGGGCCGGGTTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSHCPGS*GRVWLW
Trigger: CCAAAGCCAAACCCGGCCCCAGCTCCCAGGGCAGTG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGTGCAGCTCTTGGCTTaGGCTCGAGCGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLVQLLA*ARAGSL
Trigger: GAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCAC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCTTGGTGCAGCTCTTaGCTTGGGCTCGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPWCSS*LGLERG
Trigger: TCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGTCCGGTGGGTGTGTaGCTCGGCAGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRPVGV*LGRFST
Trigger: GGTGCTGAACCTGCCGAGCCACACACCCACCGGACG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGAAGAAAACAGCTGTGTaGTCTCAAAAGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PRAPYSREALEGGHGGWEKKTAV*SQKGCS
Trigger: ACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCAGGGCGCAGGGGTGTaGGCTGAGGGGATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQQGAGV*AEGMGC
Trigger: GCAGCCCATCCCCTCAGCCCACACCCCTGCGCCCTG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCCCTCGACAAGCCATaGTGGGGCCTCCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPALDKP*WGLPDP
Trigger: GGGGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACGCCCCAGCCGCCGGTaGCGCCTGTTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRPSRR*RLFFCC
Trigger: GCAGCAGAAGAACAGGCGCCACCGGCGGCTGGGGCG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCTGCCCGCCAGCCTTaGGGGAGCCTGCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPARQP*GSLQGA
Trigger: AGCCCCTTGCAGGCTCCCTCAAGGCTGGCGGGCAGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGTCTCGGGGCCGAGTaGGCAGCTCCAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGLGAE*AAPGEE
Trigger: CTCTTCCCCTGGAGCTGCTCACTCGGCCCCGAGACC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCGTGTTGGTGGCCGGTaGCGGCAGTGGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRVGGR*RQWGLA
Trigger: AGCGAGTCCCCACTGCCGTCACCGGCCACCAACACG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGGGCGGGTTTCCTCTaGGGTCTCGGTGTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPRAGFL*GLGVGG
Trigger: CCCACCAACACCGAGACCTCAGAGGAAACCCGCCCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGGGCAGGCGGTACTTaGGGGGTTAGCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGAGGT*GVSHGC
Trigger: GCACCCGTGGCTAACCCCTCAAGTACCGCCTGCCCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGGGCAGGCGGTACTTaGGGGGTTAGCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGAGGT*GVSHGC
Trigger: GCACCCGTGGCTAACCCCTCAAGTACCGCCTGCCCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTCTGGGAAGAGGGATaGGGACTCCAAGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVWEEG*GLQGRW
Trigger: CCACCGACCTTGGAGTCCTCATCCCTCTTCCCAGAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGGGTACGGTGGATCTaGCGGCACCGTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGVRWI*RHRLLG
Trigger: CCCCAGAAGACGGTGCCGTCAGATCCACCGTACCCC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCCCCCTTCCAGACCTaGGGGGTTCACTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAPFQT*GVHSWR
Trigger: CCTCCACGAGTGAACCCCTCAGGTCTGGAAGGGGGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTTTTGGGACTGGCATTaGCTGAGGCGTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRFWDWH*LRRGCP
Trigger: CGGACAACCACGCCTCAGTCAATGCCAGTCCCAAAA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGCTCGGCCTCCTCCTaGAGGCTCATGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGSASS*RLMAAL
Trigger: CAGGGCAGCCATGAGCCTTCAGGAGGAGGCCGAGCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGCTCTAGAGGCTGCTaGGCAGGCAAGGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGSRGC*AGKAAG
Trigger: CCCAGCGGCCTTGCCTGCTCAGCAGCCTCTAGAGCC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGGTCTCCCCGTGAGTaGTTTGGTCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGSPRE*FGLSFP
Trigger: TGGGAAGGAGAGACCAAATCACTCACGGGGAGACCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGCTCTGTGGCCCCTGTaGGCTCGCCGTGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCALWPL*ARRALE
Trigger: TTCGAGGGCACGGCGAGCTCACAGGGGCCACAGAGC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGTGGCGCTGCAGCTTaGAGGGCTTGGGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGGAAA*RAWGSA
Trigger: AGCGCTTCCCCAAGCCCTTCAAGCTGCAGCGCCACC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCAGCTCACAACCTCTaGTCGGGTGGGTCACGGGGT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSAAHNL*SGGSRG
Trigger: ACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTGCCTTCCGCTGCTCTaGTGGTGGCGGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSCLPLL*WWRPGF
Trigger: AAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCTGCGCTCATGGTCCTaGGTGGAGCCTGGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLRSWS*VEPGES
Trigger: CGACTCCCCAGGCTCCACTCAGGACCATGAGCGCAG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCAGGGAAGGGTTTTGTaGTGGCCCCATGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEQGRVL*WPHAVP
Trigger: CGGCACTGCATGGGGCCAGCACAAAACCCTTCCCTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTGGCCCATTGGTGAATaGGTGCCCAGCCACATCCGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEWPIGE*VPSHIR
Trigger: GCGGATGTGGCTGGGCACGCATTCACCAATGGGCCA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGGAGCCGCCCTGGCTaGTTCTCACGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGSRPG*FSRLAA
Trigger: AGCTGCCAGCCGTGAGAAGCAGCCAGGGCGGCTCCC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCACGGGGGAAGCCCTaGAGCCCTCCCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALARGKP*SPPRPT
Trigger: GGTGGGTCGGGGAGGGCTGCAGGGCTTCCCCCGTGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGAGCAAGCCCGCGTGTaGGTCGGCAGGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCEQARV*VGRDSG
Trigger: CCCAGAGTCCCTGCCGACGCACACGCGGGCTTGCTC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCAGGGGGTCGTCTTTaGCCTCGGCCTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSGGRL*PRPGRP
Trigger: GGGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCGGAACAGCTTCAACTaGTTCCCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSRNSFN*FPLLCC
Trigger: GCAGCAGAGGAGGGGGAAGCAGTTGAAGCTGTTCCG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCCGACCCCTCTGCTaGGCCGCCCGAGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPRPLC*AARVQI
Trigger: GATCTGGACTCGGGCGGCGCAGCAGAGGGGTCGGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTCCCCGCCGGCTTCCTaGCTCGCCGCCTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALSPPAS*LAAFRG
Trigger: ACCCCGGAAGGCGGCGAGGCAGGAAGCCGGCGGGGA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGCCGGTGTCATGTCTaGTGGGCGGCGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPCRCHV*WAAAAL
Trigger: CAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCCGACGGCTTGGGGGTaGCGGTGTCATGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWPTAWG*RCHVCW
Trigger: CCAGCAGACATGACACCGGCACCCCCAAGCCGTCGG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGACCACCCAGCAGGCTaGCCACACCTGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCDHPAG*PHLALA
Trigger: CGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGACCACCCAGCAGGCTaGCCACACCTGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQDHPAG*PHLALA
Trigger: CGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCAAAGGCAGGAGCTaGTGGCCGGCGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGKGRS*WPAGHP
Trigger: GGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCAAGGTCGGTGGCGATaGAGCCCTGCCTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWQGRWR*SPAWLR
Trigger: ACGGAGCCAGGCAGGGCTGCATCGCCACCGACCTTG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTGGAGGTGCCCACCTaGTCTGCCTGCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVEVPT*SACRMS
Trigger: GGACATTCTGCAGGCAGAGCAGGTGGGCACCTCCAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGGCGTGGTTGTCCGTaGCCCCTGGGCTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCRRGCP*PLGSPR
Trigger: ACGGGGTGAGCCCAGGGGGCACGGACAACCACGCCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTCCTCCGGCTCCTTaGTGCTGGTCCCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGPPAP*CWSPSH
Trigger: GTGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGAGCGGAAGGAGGCTaGGCAGACCTCACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGAEGG*ADLTGH
Trigger: GTGACCTGTGAGGTCTGCGCAGCCTCCTTCCGCTCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCTGCCTGTTTGGGATaGAGCTCATCTTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSACLG*SSSSLA
Trigger: GGCCAGGGAAGATGAGCTGCATCCCAAACAGGCAGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCTGGTCAGTCTCCGCTaGACCCTCCATCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHLVSLR*TLHHPR
Trigger: CCTGGGGTGATGGAGGGTGCAGCGGAGACTGACCAG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCCGAGGCTCCCTTCTaGCCAGTTGGCTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAEAPF*PVGCSP
Trigger: GGGGGAACAGCCAACTGGGCAGAAGGGAGCCTCGGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCTGCACCAGCTTCCCTaGTGGGCTCCAGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLHQLP*WAPGPT
Trigger: TGTGGGCCCTGGAGCCCAGCAGGGAAGCTGGTGCAG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCCGCTGGGACCATGTaGAGCTCAGGAATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHAAGTM*SSGMAS
Trigger: GGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCCCGCGAGCCAAACCTaGGCTCCACGCACATGTAGC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHPASQT*APRTCS
Trigger: GCTACATGTGCGTGGAGCGCAGGTTTGGCTCGCGGG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATGCCGGCGGAGCGCTTaGCCCTGTGGTGTTTGGGCG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKCRRSA*PCGVWA
Trigger: CGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCCTTGCAGGCCTCGTaGACCGGGGTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSLQAS*TGVACR
Trigger: CCTGCAAGCCACCCCGGTGCACGAGGCCTGCAAGGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACGGGCATGGCCACCCTaGGCCGTTTGCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKRAWPP*AVCWAV
Trigger: CACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCCATCCCTTGGTGGTaGTGGGAGCCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHAIPWW*WEPPPN
Trigger: GTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGGCACCCGGGGCCCTaGGTTTCCCTGAGAACACGA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGHPGP*VSLRTR
Trigger: TCGTGTTCTCAGGGAAACGCAGGGCCCCGGGTGCCC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGCCAGCTCCCCGGGTaGCAGGCTCCCCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGQLPG*QAPHRL
Trigger: AAGGCGGTGGGGAGCCTGGCACCCGGGGAGCTGGCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCACCTCCTGTCTTGGTaGCGGGGCGAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWHLLSW*RGEGFH
Trigger: GTGGAAGCCCTCGCCCCGGCACCAAGACAGGAGGTG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACACGCGGCTGGGAGTTaGCTGCTTCCGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVHAAGS*LLPRGP
Trigger: CGGACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTAAGTAGTGAGCACTaGCTTCCCCCACGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLSSEH*LPPRGF
Trigger: GAAACCACGTGGGGGAAGGCAGTGCTCACTACTTAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCGCCGCCATGCAGGTaGCCGTGCCCTCGACAAGCC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAPPCR*PCPRQA
Trigger: GGCTTGTCGAGGGCACGGGCACCTGCATGGCGGCGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCCTGGGTTGGGTCGGTaGATGAGGGTGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWPGLGR*MRVPWP
Trigger: TGGCCAGGGCACCCTCATGCACCGACCCAACCCAGG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTCCTCCAGTGGCGGCTaGGAGGGGTGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALSSSGG*EGCPGL
Trigger: CAGCCCGGGGCACCCCTCCCAGCCGCCACTGGAGGA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGTGGTCCTGGTAGCTaGGGTGTTGTCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGGPGS*GVVLQW
Trigger: CCACTGGAGGACAACACCCCAGCTACCAGGACCACC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCTTGGTCCTCGAGCTaGCGATGCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWAWSSS*RCPECS
Trigger: GCTACATTCTGGGCATCGCCAGCTCGAGGACCAAGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGCAGCCTCCAGCTGTaGGTTCTCTGGTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGSLQL*VLWCLV
Trigger: GACGAGACACCAGAGAACCCACAGCTGGAGGCTGCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTTGGGCCTCAGTCCTTaGGAGGCCCGGCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLGLSP*EARPEW
Trigger: CCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTCTTCGGCGGCGGGTTaGGCCTCAGTCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPSSAAG*ASVLGR
Trigger: CCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGTAAAGCTGGAGGGTaGCTCCTGGAAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGKAGG*LLEAPV
Trigger: CACAGGTGCTTCCAGGAGCCACCCTCCAGCTTTACC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAGGAGTCGGCCCCACTaGCCTGGTATTCGGGATAGG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERSRPH*PGIRDR
Trigger: CCTATCCCGAATACCAGGCCAGTGGGGCCGACTCCT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTGGTGTCCACCCCACTaGCTCTGTACGCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLWCPPH*LCTPAL
Trigger: CAGGGCAGGCGTACAGAGCCAGTGGGGTGGACACCA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCATTCCGTGGGGACTTaGCCGGGCGGTCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCHSVGT*PGGREH
Trigger: GTGCTCCCGACCGCCCGGCCAAGTCCCCACGGAATG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGCTGCTTCTCACGGCTaGCAGCTTCTCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEAASHG*QLLSGS
Trigger: GGACCCAGAGAGAAGCTGCCAGCCGTGAGAAGCAGC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGCCGGCCGTGTTGGTaGCCGGTGACGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFCRPCW*PVTAVG
Trigger: CCCCACTGCCGTCACCGGCCACCAACACGGCCGGCA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTTGGCTGGGCTGCTaGACATCGGCGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGWLGC*TSATGK
Trigger: CTTCCCTGTCGCCGATGTCCAGCAGCCCAGCCAACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAAGGGGGCCGGGGAGCTaGCTTTCCTCTGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRGPGS*LSSELG
Trigger: CCCCAGCTCAGAGGAAAGCCAGCTCCCCGGCCCCCT...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGTCTCCTCCAGGCACTaGAAGGCACCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWVSSRH*KAPSAP
Trigger: GGGAGCCGAGGGTGCCTTCCAGTGCCTGGAGGAGAC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCTGGAGACCGCTGGTaGCCATCCTTGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPGDRW*PSLALA
Trigger: GGCCAGGGCCAAGGATGGCCACCAGCGGTCTCCAGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCCTGGAGACCGCTGGTaGCCATCCTTGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCPGDRW*PSLALA
Trigger: GGCCAGGGCCAAGGATGGCCACCAGCGGTCTCCAGG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCGGAGCTGGGACCTCTaGGGCCGGAAGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRSWDL*GRKAPR
Trigger: ACGAGGAGCCTTCCGGCCCCAGAGGTCCCAGCTCCG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTGGCTCATCCTCTCTaGGACCCTGGGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVAHPL*DPGSAP
Trigger: TGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGCGATCAGCACACTTaGGGCCTCCCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGDQHT*GLPPWR
Trigger: CCGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGGCGGCGGCTGCTCTaGTATCAGGAGACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGRRLL*YQETGA
Trigger: AGCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGTTGGCGAGCTTCCGTaGGGCGCCGTGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKVGELP*GAVLAR
Trigger: CCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAAC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTAGCCAGCCAGGTCTTTaGGTCCGAGGAACAACTCAC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSQPGL*VRGTTH
Trigger: GTGAGTTGTTCCTCGGACCCAAAGACCTGGCTGGCT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGCTCCTTGGCAGCTGTaGCTCGAGGGAACCGGCATC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLAPWQL*LEGTGI
Trigger: GATGCCGGTTCCCTCGAGCCACAGCTGCCAAGGAGC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTCAGCGGTGCCAGGTaGGCTCCTTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLSGAR*APWQLW
Trigger: CCACAGCTGCCAAGGAGCCCACCTGGCACCGCTGAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGAAACCAGGTCTTCCTaGGCACAGGGGAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSETRSS*AQGRRA
Trigger: AGCCCTTCTCCCCTGTGCCCAGGAAGACCTGGTTTC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCTGTCTCCTTCTGCCTaGCAAAGTCCAGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPLSPSA*QSPVLE
Trigger: CTCCAAGACTGGACTTTGCCAGGCAGAAGGAGACAG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGTCTCCTTCTGCCTaGCAAAGTCCAGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLSPSA*QSPVLE
Trigger: CTCCAAGACTGGACTTTGCCAGGCAGAAGGAGACAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCAGGGGCCCCTCGGTaGGGCTGGTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALAGAPR*GWSAVP
Trigger: CGGCACAGCAGACCAGCCCCACCGAGGGGCCCCTGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTGGGCAGCATGGCTaGGACTGGCACCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPGQHG*DWHQKA
Trigger: GGCCTTTTGGTGCCAGTCCCAGCCATGCTGCCCAGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGTGGGCGGCTGAAGTaGGTGAGGGGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFCGRLK*VRGRRR
Trigger: CCGCCTGCGCCCCCTCACCCACTTCAGCCGCCCACA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGAAGGCGAGGTAAGTaGGTCTTCACGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGRRGK*VFTGQG
Trigger: CCCCTGCCCCGTGAAGACCCACTTACCTCGCCTTCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGGCTGCCCTCCCCCTaGAGAAGGCAACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGLPSP*RRQPAR
Trigger: CCTGGCTGGTTGCCTTCTCCAGGGGGAGGGCAGCCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGGCTGCCCTCCCCCTaGAGAAGGCAACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGLPSP*RRQPAR
Trigger: CCTGGCTGGTTGCCTTCTCCAGGGGGAGGGCAGCCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGCGGGCAGTATTGCTTaGAGAATACGAGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRAGSIA*RIRGVA
Trigger: GGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGTCTCAGGGGTCCCTaGGTCCTCCGGCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGLRGP*VLRLLA
Trigger: AGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCAGACTGGAAGTCACTaGCTGTGCTGCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSQTGSH*LCCLGL
Trigger: CAGCCCCAAGCAGCACAGCCAGTGACTTCCAGTCTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTCCCCCTGGGGAGTCTaGTGGGAGGCATTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSESPWGV*WEAFLW
Trigger: CCACAGAAATGCCTCCCACCAGACTCCCCAGGGGGA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGCCCATGTGGAGCTTaGCCCTTCCACTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSGPCGA*PFHWPF
Trigger: GAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCGGCTGGCACTTTTaGGCTAGGGGCTCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGGWHF*ARGSRG
Trigger: GCCTCTAGAGCCCCTAGCCCAAAAGTGCCAGCCGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGTGGCTGGGTGACGTaGCTGGGGTCTCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGGWVT*LGSPRE
Trigger: CTCACGGGGAGACCCCAGCCACGTCACCCAGCCACC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGTGGCTGGGTGACGTaGCTGGGGTCTCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGGWVT*LGSPRE
Trigger: CTCACGGGGAGACCCCAGCCACGTCACCCAGCCACC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGGGCAGGCGGTGGCTaGGTGACGTGGCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCWAGGG*VTWLGS
Trigger: AGACCCCAGCCACGTCACCCAGCCACCGCCTGCCCA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCCAGGTCCCAGAGTaGCCAAGCGAGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPQVPE*PSEAAA
Trigger: AGCAGCCGCCTCGCTTGGCCACTCTGGGACCTGGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCTCCAGGTGGCTTCTaGGCCCCAGTCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSPGGF*APVSPA
Trigger: TGCAGGGGAGACTGGGGCCCAGAAGCCACCTGGAGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTGTGCAGCTCAGGAATaGCCTCCGGCCGATCGTCCT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSECAAQE*PPADRP
Trigger: AGGACGATCGGCCGGAGGCCATTCCTGAGCTGCACA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACGGAGCGGCAGCAGGTaGGTGTTCCCGGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKRSGSR*VFPGSP
Trigger: TGGGCTTCCCGGGAACACCCACCTGCTGCCGCTCCG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCGAAGTCTAAGAAGCTaGGGCCGGGGAGACCCACGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRSLRS*GRGDPR
Trigger: CCGTGGGTCTCCCCGGCCCCAGCTTCTTAGACTTCG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTAGGCTGCGGAAGCGCTaGAAGCACACTTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRLRKR*KHTLHL
Trigger: CAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCAGCCT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACGGGCCATCCCTTGGTaGTGCTGGGAGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKRAIPW*CWEPPP
Trigger: CGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTCCTGGTGGTTGGATaGCAGCTCACAACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLLVVG*QLTTSD
Trigger: ATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGAGGGAGAGCTTGCTaGAGAAGAGGCCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRGRAC*RRGPGL
Trigger: CAGCCCCGGGCCTCTTCTCCAGCAAGCTCTCCCTCT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGCAGCCCGCAGGCTTaGTGGCGCTGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGSPQA*WRCPCG
Trigger: TCCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCTGGAGCTGCCCGCTaGCTGGCTGGGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSGAAR*LAGAGC
Trigger: GCAGCCAGCCCCAGCCAGCCAGCGGGCAGCTCCAGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGCTTGGCTGGGGTGGTaGCTGTCTCGCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLAWLGW*LSRSGA
Trigger: AGCTCCAGAGCGAGACAGCCACCACCCCAGCCAAGC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTGGGCTTGGCTGGGGTaGTGGCTGTCTCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLWAWLG*WLSRSG
Trigger: TCCAGAGCGAGACAGCCACCACCCCAGCCAAGCCCA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTGGGCTTGGCTGGGGTaGTGGCTGTCTCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHWAWLG*WLSRSG
Trigger: TCCAGAGCGAGACAGCCACCACCCCAGCCAAGCCCA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTCTGGCTGTTGGGCTTaGGCTTGGTCGGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSGCWA*AWSGAR
Trigger: GCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATCAGGGAGCCGGAGCTaGCCAAGGAGGCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVSGSRS*PRRQAE
Trigger: CTCGGCCTGCCTCCTTGGCCAGCTCCGGCTCCCTGA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGCCTTCCCCCACGTaGTTTCTAAGGTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLPSPT*FLRSLW
Trigger: CCAAAGTGACCTTAGAAACCACGTGGGGGAAGGCAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGGGCCCGCGGGAGCTaGCACAGGGGCGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCRARGS*HRGGFF
Trigger: GAAGAAACCGCCCCTGTGCCAGCTCCCGCGGGCCCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp CCCTCCGCACTTGGTTTGCGACACTCCGGAGGCGTTTaGAATGGCCTACAACACCTTCCAGAGAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: PSALGLRHSGGV*NGLQHLPERRS
Trigger: AGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGTCTCGGGGCCGAGTaGGCAGCTCCAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGLGAE*AAPGEE
Trigger: CTCTTCCCCTGGAGCTGCTCACTCGGCCCCGAGACC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTAGGTCTTCGCGTGGCTaGGCAAGCCCGCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRSSRG*ASPRVR
Trigger: ACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCACGATCTTCAGAATaGGCTCCTTGCCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLARSSE*APCPRR
Trigger: GCGCCTGGGGCAAGGAGCTCATTCTGAAGATCGTGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTATCCTTGGGGGCCACTaGGGGGCGATCAGCACACTT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLILGGH*GAISTL
Trigger: AAGTGTGCTGATCGCCCCTCAGTGGCCCCCAAGGAT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCATCCTTGGGGGCCACTaGGGGGCGATCAGCACACTT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLILGGH*GAISTL
Trigger: AAGTGTGCTGATCGCCCCTCAGTGGCCCCCAAGGAT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTGTGCTGTCCGGGGCTaGCTCTTCGGCAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLCAVRG*LFGSFR
Trigger: CCTGAAACTGCCGAAGAGTCAGCCCCGGACAGCACA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTGTGCTGTCCGGGGCTaGCTCTTCGGCAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHCAVRG*LFGSFR
Trigger: CCTGAAACTGCCGAAGAGTCAGCCCCGGACAGCACA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGGGTACGGTGGATCTaGCGGCACCGTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGVRWI*RHRLLG
Trigger: CCCCAGAAGACGGTGCCGTCAGATCCACCGTACCCC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGAGCCCCGTCACCCTaGAATGCCAAGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGAPSP*NAKSGA
Trigger: GGCCCCTGACTTGGCATTTCAGGGTGACGGGGCTCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCCCCCTTCCAGACCTaGGGGGTTCACTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAPFQT*GVHSWR
Trigger: CCTCCACGAGTGAACCCCTCAGGTCTGGAAGGGGGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGGACTGGCATTGACTaGGGCGTGGTTGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGTGID*GVVVRA
Trigger: GGCACGGACAACCACGCCTCAGTCAATGCCAGTCCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGCAGGTTACAGCACTaGCGGAGCCAGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPCRLQH*RSQEAR
Trigger: CCTGGCCTCCTGGCTCCGTCAGTGCTGTAACCTGCA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACACGGGACCTCTGTTTaGGGTCTTGGGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKHGTSV*GLGGRG
Trigger: CCCTCGGCCCCCAAGACCTCAAACAGAGGTCCCGTG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGCTGGGGTCTCCCCGTaGGTGATTTGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEAGVSP*VIWSLL
Trigger: AAGGAGAGACCAAATCACTCACGGGGAGACCCCAGC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCTGAGAACCTCCTTTaGGCCCTGGGCAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSENLL*ALGRRW
Trigger: CCACCGCCTGCCCAGGGCTCAAAGGAGGTTCTCAGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGGACCCCGGTGCTCTaGGAACCTCCTTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGTPVL*EPPLSP
Trigger: AGGGCTCAAAGGAGGTTCTCAGAGCACCGGGGTCCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCCAGACACCTTCCTCTaGTCGGCTGTGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPPDTFL*SAVGPA
Trigger: AGCAGGGCCCACAGCCGATCAGAGGAAGGTGTCTGG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGCCCTCTCACCCTTTaGCCCACCTTCACAGGCACG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHSPLTL*PTFTGT
Trigger: CGTGCCTGTGAAGGTGGGTCAAAGGGTGAGAGGGCT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGCAACTTGGCGGGGCTaGAGGTCTCCAGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSATWRG*RSPVMV
Trigger: CACCATGACTGGAGACCTGCAGCCCCGCCAAGTTGC...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTCTTCCCAGGGGTGCTaGTCGGGGCCTGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSSQGC*SGPGLS
Trigger: TGAGAGGCCAGGCCCCGAGCAGCACCCCTGGGAAGA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTTTGTGCTGGCCCCATaGAGTGCCGGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSFVLAP*SAGKGN
Trigger: GTTCCCCTTCCCGGCACTGCATGGGGCCAGCACAAA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGTTGTAGGTGAACAGTaGTGGGGAGCCGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLVVGEQ*WGAALA
Trigger: AGCCAGGGCGGCTCCCCAGCACTGTTCACCTACAAC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGGAAGAGCAGGTGCTaGCGGCCGTGTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGKSRC*RPCWWP
Trigger: CGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGGGGTTGGCTGGGCTaGTGGACATCGGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQWGWLG*WTSATG
Trigger: CCCTGTCGCCGATGTCCAGCAGCCCAGCCAACCCCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGAGCAAGCCCGCGTGTaGGTCGGCAGGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFEQARV*VGRDSG
Trigger: CCCAGAGTCCCTGCCGACGCACACGCGGGCTTGCTC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCCCGACCCCTCTGCTaGGCCGCCCGAGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPRPLC*AARVQI
Trigger: GATCTGGACTCGGGCGGCGCAGCAGAGGGGTCGGGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTGCCGGTGTCATGTCTaGTGGGCGGCGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCCRCHV*WAAAAL
Trigger: CAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCGACGGCTTGGGGGTaGCGGTGTCATGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPTAWG*RCHVCW
Trigger: CCAGCAGACATGACACCGGCACCCCCAAGCCGTCGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGCTCCGTCTCAGCGGTaGCAGGTGGGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCAPSQR*QVGSLA
Trigger: TGCCAAGGAGCCCACCTGGCACCGCTGAGACGGAGC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGTGGCGATGCAGCCCTaGCTGGCTCCGTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFVAMQP*LAPSQR
Trigger: CCGCTGAGACGGAGCCAGGCAGGGCTGCATCGCCAC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAAGGTCGGTGGCGATaGAGCCCTGCCTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQGRWR*SPAWLR
Trigger: ACGGAGCCAGGCAGGGCTGCATCGCCACCGACCTTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGCACCCTCCCGATGTaGAGTGGATTCTCCAACGCG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRTLPM*SGFSNA
Trigger: CGCGTTGGAGAATCCACTGCACATCGGGAGGGTGCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGTGGGCCAGGCTGCTTaGTGGGCTCAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVVGQAA*WAQAGR
Trigger: TCTGCCTGCCTGAGCCCAGCAAGCAGCCTGGCCCAC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGAGGCCCCCGCCGGTaGAAACTCATTACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGGPRR*KLITLK
Trigger: TTTGAGGGTAATGAGTTTGCACCGGCGGGGGCCTCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGGAGAGTTGTCACCTaGACACCCCCTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGRVVT*TPPGEP
Trigger: GGGCTCCCCAGGGGGTGTGCAGGTGACAACTCTCCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCCGGGAGGGTCCCTaGAGGACGGAGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGREGP*RTEMLA
Trigger: TGCCAGCATCTCCGTCCTGCAGGGACCCTCCCGGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTGGGAGTCCCCTGCCTaGCTGTGCCTCATCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWWESPA*LCLISG
Trigger: ACCGGAGATGAGGCACAGGCAGGCAGGGGACTCCCA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGAGGCGGGCAGTATTaGTTGGAGAATACGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRGGQY*LENTRS
Trigger: ACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCTGCCTGTTTGGGATaGAGCTCATCTTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSACLG*SSSSLA
Trigger: GGCCAGGGAAGATGAGCTGCATCCCAAACAGGCAGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCTGGTCAGTCTCCGCTaGACCCTCCATCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLVSLR*TLHHPR
Trigger: CCTGGGGTGATGGAGGGTGCAGCGGAGACTGACCAG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCTGTTCCCCCAGAGCTaGACCATCCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLLFPQS*TIHPPW
Trigger: CCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCCGAGGCTCCCTTCTaGCCAGTTGGCTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVAEAPF*PVGCSP
Trigger: GGGGGAACAGCCAACTGGGCAGAAGGGAGCCTCGGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCCCCAGAACCCCCTTaGCGAGGCTCCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSPEPP*RGSLLP
Trigger: GGGCAGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTCCCCAGAACCCCCTTaGCGAGGCTCCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSPEPP*RGSLLP
Trigger: GGGCAGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCTCCTTCAGGCACATaGCGCACGCCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPPSGT*RTPRAR
Trigger: CCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCGAAGCGGACCGCGTaGTCACGCAGGTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVAKRTA*SRRCSL
Trigger: CAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTTGGCTTCTCCCTCTTaGCCCCACGGGTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQLASPS*PHGSPG
Trigger: CCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATTGGCTTCTCCCTCTTaGCCCCACGGGTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLASPS*PHGSPG
Trigger: CCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTGCTGGGGGTGCTaGGTGCCCGGGGTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGCWGC*VPGVSP
Trigger: GGGCGAAACCCCGGGCACGCAGCACCCCCAGCAACC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCCTTGCAGGCCTCGTaGACCGGGGTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSLQAS*TGVACR
Trigger: CCTGCAAGCCACCCCGGTGCACGAGGCCTGCAAGGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCATACAGCGGCGTGTaGTGCAGCTCCGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAYSGV*CSSGRS
Trigger: GGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCACCCTGCGCCGTTTaGTGGGCAGTGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPPCAV*WAVCPR
Trigger: TCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGAAGAGGCCCGGGGCTaGCTGGGGAAGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVEEARG*LGKPRS
Trigger: AGAACGAGGCTTCCCCAGGCAGCCCCGGGCCTCTTC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGAAGAGGCCCGGGGCTaGCTGGGGAAGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQEEARG*LGKPRS
Trigger: AGAACGAGGCTTCCCCAGGCAGCCCCGGGCCTCTTC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGGCACCCGGGGCCCTaGGTTTCCCTGAGAACACGA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGHPGP*VSLRTR
Trigger: TCGTGTTCTCAGGGAAACGCAGGGCCCCGGGTGCCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCACCTCCTGTCTTGGTaGCGGGGCGAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQHLLSW*RGEGFH
Trigger: GTGGAAGCCCTCGCCCCGGCACCAAGACAGGAGGTG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCCTGGGGGAAGGCCTTaGCCAGTCTGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHPGGRP*PVCPSS
Trigger: AGAGGAAGGACAGACTGGGCAAGGCCTTCCCCCAGG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTGGTCTCAAAAGGGCTaGAGTGGCCCCGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSWSQKG*SGPVFH
Trigger: GTGAAAGACGGGGCCACTGCAGCCCTTTTGAGACCA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCTTCTGTGGTGTCGGTaGCCACAGGGCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLLWCR*PQGAGV
Trigger: CACCCCTGCGCCCTGTGGGCACCGACACCACAGAAG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGGGAACGGGAGGTTGTaGAAATCTCCAAACATTGGC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGGNGRL*KSPNIG
Trigger: GCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGAGGAGGCCTGTTGTaGTCTTGGGGGACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGGGLL*SWGTRR
Trigger: CCGCCTGGTCCCCCAAGAGCACAACAGGCCTCCTCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTGGCGCCTGTTCTTCTaGTGCACGATCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPWRLFF*CTIFRM
Trigger: CATTCTGAAGATCGTGCAGCAGAAGAACAGGCGCCA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTCTCCAGTCATGGTaGGGGGCGGCGCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGLQSW*GAALLG
Trigger: CCCGAGGAGCGCCGCCCCCCACCATGACTGGAGACC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCAGCTGTGGGTTCTCTaGTGTCTCGTCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHQLWVL*CLVQGG
Trigger: CCCACCCTGGACGAGACACCAGAGAACCCACAGCTG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTTGGGCCTCAGTCCTTaGGAGGCCCGGCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLGLSP*EARPEW
Trigger: CCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGGAGTCGGCCCCACTaGCCTGGTATTCGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRSRPH*PGIRDR
Trigger: CCTATCCCGAATACCAGGCCAGTGGGGCCGACTCCT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCCACTGAGGTCGCTGTaGCGGTTCAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCPLRSL*RFRPPG
Trigger: GCCAGGTGGCCTGAACCGCCACAGCGACCTCAGTGG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCACTGAGGTCGCTGTaGCGGTTCAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPLRSL*RFRPPG
Trigger: GCCAGGTGGCCTGAACCGCCACAGCGACCTCAGTGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGAGGCTGGGTGTCCCGTaGGGTGAAACCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQRLGVP*GETWGW
Trigger: CCAGCCCCAGGTTTCACCCCACGGGACACCCAGCCT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCCCACTACCCTCGGTaGGGGCAGGCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSHYPR*GQAGCP
Trigger: GGGACACCCAGCCTGCCCCCACCGAGGGTAGTGGGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGCTGCCGGCCGTGTTaGTGGCCGGTGACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFCCRPC*WPVTAV
Trigger: CACTGCCGTCACCGGCCACCAACACGGCCGGCAGCA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGCCTTGGCTGGCTCTaGCTGGTAGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGLGWL*LVVGGE
Trigger: CTCCCCACCCACTACCAGCCAGAGCCAGCCAAGGCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCCCTCGTGGGGGAATaGGGTCTCCTCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKALVGE*GLLQAL
Trigger: CAGTGCCTGGAGGAGACCCCATTCCCCCACGAGGGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCTGCTGAGGGAGAAGTaGTGTGTGGGGTACGGAGGC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLLLREK*CVGYGG
Trigger: GCCTCCGTACCCCACACACCACTTCTCCCTCAGCAG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGCAGCACGTCCAGCTaGTCCAGGCTGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSSTSS*SRLALL
Trigger: CAGCAGCGCCAGCCTGGACCAGCTGGACGTGCTGCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCACAGAACTGCCGGTaGGCCAGGAAGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPQNCR*ARKAAR
Trigger: CCTGGCGGCCTTCCTGGCCCACCGGCAGTTCTGTGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGGGGTGTCCGGAGCTaGGACCTCTGGGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGGVRS*DLWGRK
Trigger: CTTCCGGCCCCAGAGGTCCCAGCTCCGGACACCCCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGGAGCTTTGCTCTCTaGAGTCACCCCCGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRSFAL*SHPRLA
Trigger: AGCAAGGCGGGGGTGACTCCAGAGAGCAAAGCTCCG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTCCTCTCTGGGACCCTaGGTCAGCTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSESSLGP*VSSTSF
Trigger: GAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCCCGCACAGGCGGCTaGAGGAGAACGCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSRTGG*RRTQSL
Trigger: GAGGCTTTGCGTTCTCCTCCAGCCGCCTGTGCGGGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCGGTGTCATGTCTGCTaGGCGGCGGCTGCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWRCHVC*AAAALV
Trigger: TACCAGAGCAGCCGCCGCCCAGCAGACATGACACCG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGGCTGCCCACACCTaGCGTTGGCGAGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQAAHT*RWRASV
Trigger: CACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCACAGAACACTGGGTTTaGGGCAGGCGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSTEHWV*GRRYLR
Trigger: CCTCAAGTACCGCCTGCCCCAAACCCAGTGTTCTGT...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACTCAGCGGTGCCAGGTaGGCTCCTTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLSGAR*APWQLW
Trigger: CCACAGCTGCCAAGGAGCCCACCTGGCACCGCTGAG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGACTCCAAGGTCGGTaGCGATGCAGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGLQGR*RCSPAW
Trigger: CCAGGCAGGGCTGCATCGCCACCGACCTTGGAGTCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGAGAGATCAGGAAAATaGCTAGGCAGCATCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGERSGK*LGSIGD
Trigger: ATCCCCGATGCTGCCTAGCCATTTTCCTGATCTCTC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACTTCCCAGGCAAAGATaGGGCGGCGCCGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLPRQR*GGAGNH
Trigger: GTGGTTCCCGGCGCCGCCCCATCTTTGCCTGGGAAG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGGCAGGTGCGCCGTTaGGAGGGTGGCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQWQVRR*EGGSVP
Trigger: AGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCTCGTGGGGCACGGTaGCCTGGCAGGTGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPRGAR*PGRCAV
Trigger: AACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGAAACCAGGTCTTCCTaGGCACAGGGGAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEETRSS*AQGRRA
Trigger: AGCCCTTCTCCCCTGTGCCCAGGAAGACCTGGTTTC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGCCACTCCAGGCCCTaGGAGCTGGAGCTGACGTAT +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHSHSRP*ELELTY
Trigger: ATACGTCAGCTCCAGCTCCCAGGGCCTGGAGTGGCT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGTTGTCCGTGCCCCCTaGGCTCACCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCVVRAP*AHPVLW
Trigger: CCAGAGAACGGGGTGAGCCCAGGGGGCACGGACAAC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGACTGCACCCTCGGTaGGGCCGGTCAGCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGLHPR*GRSALF
Trigger: AAACAGCGCTGACCGGCCCCACCGAGGGTGCAGTCC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGTTCAGGCCGGGGCTaGACGCCCTCTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCCSGRG*TPSLES
Trigger: GGACTCCAGAGAGGGCGTCCAGCCCCGGCCTGAACA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCTGTGGCCAGCAGTaGCTTGTTCAGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPCGQQ*LVQAGA
Trigger: AGCCCCGGCCTGAACAAGCCACTGCTGGCCACAGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCCCGACAGAGGGTGCTaGGCTATCCCCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCPDRGC*AIPCGQ
Trigger: CTGGCCACAGGGGATAGCCCAGCACCCTCTGTCGGG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCGACAGAGGGTGCTaGGCTATCCCCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPDRGC*AIPCGQ
Trigger: CTGGCCACAGGGGATAGCCCAGCACCCTCTGTCGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCCTGGCCCTCCCTGTaGCCGAGGCGGGCAGTATTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAWPSL*PRRAVL
Trigger: CAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACTCTGTTTGAGGTCTTaGGGGCCGAGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLCLRS*GPRGSP
Trigger: GGGGGACCCCCTCGGCCCCCAAGACCTCAAACAGAG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCTCTGTTTGAGGTCTTaGGGGCCGAGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQLCLRS*GPRGSP
Trigger: GGGGGACCCCCTCGGCCCCCAAGACCTCAAACAGAG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGCTTGGCCCTTCCACTaGCCGTTCTCTGTAGATGCA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSAWPFH*PFSVDA
Trigger: TGCATCTACAGAGAACGGCCAGTGGAAGGGCCAAGC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTCACAGGCCCATGTaGAGCTTGGCCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGHRPM*SLALPL
Trigger: CAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTTCTTCCTGGGCGGCTaGCACTTTTGGGCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLFFLGG*HFWARG
Trigger: GCCCCTAGCCCAAAAGTGCCAGCCGCCCAGGAAGAA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTGTGGCTTTTCTTCCTaGGCGGCTGGCACTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSCGFSS*AAGTFG
Trigger: CCCAAAAGTGCCAGCCGCCCAGGAAGAAAAGCCACA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGGGCAGGCGGTGGCTaGGTGACGTGGCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFWAGGG*VTWLGS
Trigger: AGACCCCAGCCACGTCACCCAGCCACCGCCTGCCCA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGCCATTGCAGGGGATaGTCTGGAGCCGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGHCRG*SGAAPI
Trigger: GATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTCCACCCTGGGTGTCTaGGTTGTCCGGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSTLGV*VVREAL
Trigger: CAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCTGGACTCCACCCTaGGTGTCTGGGTTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPWTPP*VSGLSG
Trigger: CCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCCCTGGACTCCACCCTaGGTGTCTGGGTTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCPWTPP*VSGLSG
Trigger: CCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGAGCTTGGAGGATCCTTaGCACTGGAGCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSLEDP*HWSQRH
Trigger: ATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCT...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGAAAGCTGGGCTGGGTTaGCAGCGGGAGCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWKAGLG*QREHRL
Trigger: AAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTT...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCCTCGCCAAGCCGCTaGGACCATGTGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVASPSR*DHVQLR
Trigger: CCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAGGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCGAACTGCTCCTTCTTaGCGAAGGTGTAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRTAPS*RRCSCR
Trigger: CCTGCAACTACACCTTCGCCAAGAAGGAGCAGTTCG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCTGCGCCGTTTGCTaGGCAGTGTGCCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPCAVC*AVCPRG
Trigger: CCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCGCATCTTGGCCTCTaGCTCCCGGCCGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPHLGL*LPAAAE
Trigger: CTCTGCCGCGGCCGGGAGCCAGAGGCCAAGATGCGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGCCCGCAGGCTTGGTaGCGCTGCCCTTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSPQAW*RCPCGR
Trigger: CCTTCCACAAGGGCAGCGCCACCAAGCCTGCGGGCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCAGCCCGCAGGCTTaGTGGCGCTGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGSPQA*WRCPCG
Trigger: TCCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTTCCTTGGGTGCACTaGGAACTTGAGTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLPWVH*ELECFA
Trigger: AGCAAAGCACTCAAGTTCCCAGTGCACCCAAGGAAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGCCGGGTTTGGCTTTaGGGGTGGCGGGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGRVWL*GWRASS
Trigger: GGATGAAGCCCGCCACCCCCAAAGCCAAACCCGGCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGTGGCTGTCTCGCTCTaGAGCTGCCCGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFVAVSL*SCPLAG
Trigger: GCCAGCCAGCGGGCAGCTCCAGAGCGAGACAGCCAC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGTGCAGGGCTCCGGCTaGGGAAGCTGGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFVQGSG*GSWAWL
Trigger: CAGCCAAGCCCAGCTTCCCCAGCCGGAGCCCTGCAC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCTGGCTGTTGGGCTTaGGCTTGGTCGGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSGCWA*AWSGAR
Trigger: GCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACGTCCGGTGGGTGTGTaGCTCGGCAGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRPVGV*LGRFST
Trigger: GGTGCTGAACCTGCCGAGCCACACACCCACCGGACG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCTGAGGAGGTCACTCTaGGCCTCGGCCGTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLRRSL*ASAVRW
Trigger: CCACCGGACGGCCGAGGCCCAGAGTGACCTCCTCAG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCTCTGCCCGAAGAGCTaGCTGAGGAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLLCPKS*LRRSLW
Trigger: CCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCAAGTGGCCACAGAGTaGACCATCTCAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLQVATE*TISGSR
Trigger: CCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCAAACATTGGCTTCTGTaGTGTCGGTGCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSKHWLL*CRCPQG
Trigger: GCCCTGTGGGCACCGACACCACAGAAGCCAATGTTT...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCGGGAACCCGGTTCCTaGGGTCAAGGTGTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHREPGS*GQGVLE
Trigger: CTCTAGCACACCTTGACCCCAGGAACCGGGTTCCCG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACGTGCGTCCCAGGCCTaGGTTGGGTCGGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRASQA*VGSVHE
Trigger: CTCATGCACCGACCCAACCCAGGCCTGGGACGCACG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGATCCTCAGCCCTCGATaGGCCCCAGGGAAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQILSPR*APGKPA
Trigger: CGCAGGCTTCCCTGGGGCCCATCGAGGGCTGAGGAT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565624.3
3UTR CAA 72 bp ATGGAGAGAAGGGTGAGAAGGAAGCCCTCTCACCCTTaGACCCACCTTCACAGGCACGACGCTGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: MERRVRRKPSHP*THLHRHDAVRG
Trigger: TCCTCTCACAGCGTCGTGCCTGTGAAGGTGGGTCAAAGGGTGAGAGGGCTTCCTTCTCACCCTTCTCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCATCCTCGGACAGGTaGCTCATAAGAGCAACGCTA +
Preference number: 4 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSSSDR*LIRATL
Trigger: TAGCGTTGCTCTTATGAGTCACCTGTCCGAGGATGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCTTATTCTTAGGAAATaGAAGTTCCTGGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWALILRK*KFLVGA
Trigger: AGCCCCGACCAGGAACTTTCATTTCCTAAGAATAAG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGCAGGTTACAGCACTaGCGGAGCCAGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQCRLQH*RSQEAR
Trigger: CCTGGCCTCCTGGCTCCGTCAGTGCTGTAACCTGCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGGACCCCGGTGCTCTaGGAACCTCCTTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGTPVL*EPPLSP
Trigger: AGGGCTCAAAGGAGGTTCTCAGAGCACCGGGGTCCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTGGGCGCGGGTTCCGTaGTGCTGTTCAGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCWARVP*CCSEGG
Trigger: CCCACCTTCTGAACAGCATCACGGAACCCGCGCCCA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCAGCTCACAACCTCTaGTCGGGTGGGTCACGGGGT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAAHNL*SGGSRG
Trigger: ACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGCCTTGAGGGAGCCTaGAAGGGGCTTCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSLEGA*KGLLPG
Trigger: ACCGGGGAGAAGCCCCTTGCAGGCTCCCTCAAGGCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTCCTCGAGCTGGCGATaGCCAGAATGTAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSSSWR*PECSAV
Trigger: CACAGCGCTACATTCTGGGCATCGCCAGCTCGAGGA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGCTGGCCCCATGCAGTaGCGGGAAGGGGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCAGPMQ*REGELE
Trigger: TTCCAGTTCCCCTTCCCGGCACTGCATGGGGCCAGC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCCATTGGTGAATGCGTaGCCAGCCACATCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPPLVNA*PATSAG
Trigger: CCCTGCGGATGTGGCTGGGCACGCATTCACCAATGG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTGGCCCATTGGTGAATaGGTGCCCAGCCACATCCGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWWPIGE*VPSHIR
Trigger: GCGGATGTGGCTGGGCACGCATTCACCAATGGGCCA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGTGTCTTGCCAGCAGTaGCCAGGGCTCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKVSCQQ*PGLLGC
Trigger: GCAGCCAAGGAGCCCTGGGCACTGCTGGCAAGACAC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGGGTCCCGGTGTCTTaGCAGCAGTGCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFWVPVS*QQCPGL
Trigger: GAGCCCTGGGCACTGCTGGCAAGACACCGGGACCCA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGGTTAGCCACGGGTaGCAGAAATTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGVSHG*QKFSRL
Trigger: CAGCCTGGAGAATTTCTGGCACCCGTGGCTAACCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATGCCGAGCTCCACCCTaGCCACCGACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKCRAPP*PPTQLL
Trigger: CAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATGCCGAGCTCCACCCTaGCCACCGACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVCRAPP*PPTQLL
Trigger: CAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCGCGTGAGGTCAGCTaGCGAGAACGTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAREVS*RERVLV
Trigger: CACGAGGACACGTTCTCGGCAGCTGACCTCACGCGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCCGTCACCCTGAAATaGCAAGTCAGGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSPVTLK*QVRGQM
Trigger: CATCTGGCCCCTGACTTGGCATTTCAGGGTGACGGG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTACTTCGGCTGTGGGCTaGTGTCAAGGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCTSAVG*CQGQRQ
Trigger: CTGGCGCTGGCCTTGACAGCAGCCCACAGCCGAAGT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGCTTGGACGCCATCTaGCTCTTCCAGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGLDAI*LFQRCP
Trigger: TGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTGGGAGTCCCCTGCCTaGCTGTGCCTCATCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCWESPA*LCLISG
Trigger: ACCGGAGATGAGGCACAGGCAGGCAGGGGACTCCCA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCGAGGCGGGCAGTATTaGTTGGAGAATACGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWRGGQY*LENTRS
Trigger: ACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGTCCTCCGGCTCCTTaGTGCTGGTCCCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGPPAP*CWSPSH
Trigger: GTGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTGCCGTTCTCTGTAGATaGAGGCTTCTTTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAAVLCR*RLLFIA
Trigger: GGCTATAAAAAGAAGCCTGCATCTACAGAGAACGGC...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGTAGGGCTTGGAGGGTaGAGCTGCTGGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCVGLGG*SCWLCG
Trigger: CCCACACAGCCAGCAGCTGCACCCTCCAAGCCCTAC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCAGAGACTGGAAGAATaGTCTCCTCCCGGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEQRLEE*SPPGAF
Trigger: GAAGGCTCCGGGAGGAGAGCATTCTTCCAGTCTCTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTGCGTAACTGGCCATTaGAGGGGATGGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLCVTGH*RGWSGA
Trigger: GGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTGTTCCCCCAGAGCTaGACCATCCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLFPQS*TIHPPW
Trigger: CCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGCAGCTGCTGGTGGTaGTGTCCGCCGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGSCWW*CPPESW
Trigger: CCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTGTGAGCTCGCCGTaGCCTCGAAGTCTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPVSSP*PRSLRS
Trigger: GCTTCTTAGACTTCGAGGGCACGGCGAGCTCACAGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCGCGAGCCAAACCTaGGCTCCACGCACATGTAGC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPASQT*APRTCS
Trigger: GCTACATGTGCGTGGAGCGCAGGTTTGGCTCGCGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGCGTGCTCACGCAGGTaGTCGTTGTACATCCAGACG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLACSRR*SLYIQT
Trigger: CGTCTGGATGTACAACGAGCACCTGCGTGAGCACGC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGGGAACTTGAGTaGTTTGCTGGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEHWELE*FAGGGC
Trigger: GCATCCACCCCCAGCAAAGCACTCAAGTTCCCAGTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTCATCCCATTCTCTGTaGCACGGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSSHSL*HGPAPR
Trigger: CCGGGGAGCTGGCCCGTGGCACAGAGAATGGGATGA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCTTGGCCCCTTGGTaGAGCTCTTGGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPLAPW*SSWLGL
Trigger: GAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCTCCGCACTTGGTTTaGGACACTCCGGAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSPPHLV*DTPEAF
Trigger: AAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCCGCACTTGGTTTaGGACACTCCGGAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPPHLV*DTPEAF
Trigger: AAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGAATGTAGCGCTGTaGGGGGCTGCCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQNVAL*GAALCP
Trigger: AGGGCAGAGGGCAGCCCCCCACAGCGCTACATTCTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCTGGGGGCCTGGGGGTaGCGCTTGGTGAGGTATAGT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQLGAWG*RLVRYS
Trigger: ACTATACCTCACCAAGCGCCACCCCCAGGCCCCCAG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGCCCCCAGGAGGTGTaGGGTAAGGGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGPQEV*GKGLLW
Trigger: CCACAGCAGCCCCTTACCCCACACCTCCTGGGGGCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGAGCATCTCCATTCCGTaGGGACTTGGCCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQSISIP*GLGRAV
Trigger: GACCGCCCGGCCAAGTCCCCACGGAATGGAGATGCT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGTAGGTGAACAGTGCTaGGGAGCCGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKVGEQC*GAALAA
Trigger: AGCAGCCAGGGCGGCTCCCCAGCACTGTTCACCTAC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGTGAAACCTGGGGCTaGGCCACCCCGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGETWG*ATPKNR
Trigger: CCTGTTCTTCGGGGTGGCCCAGCCCCAGGTTTCACC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGAAACCTGGGGCTaGGCCACCCCGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGETWG*ATPKNR
Trigger: CCTGTTCTTCGGGGTGGCCCAGCCCCAGGTTTCACC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATCTTTGCCCTCGGCCTaGGCGTCCCCAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVSLPSA*ASPANR
Trigger: CCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAAAGA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCCGGGTTGTCCGACTaGTACTCCATGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSGLSD*YSMPLS
Trigger: GCTCAACGGCATGGAGTACCAGTCGGACAACCCGGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGAGGTCTCGGTGTTGGTaGGGACCTGCAGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWRSRCW*GPAGDP
Trigger: AGGATCCCCTGCAGGTCCCCACCAACACCGAGACCT...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCCCGCACAGGCGGCTaGAGGAGAACGCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSRTGG*RRTQSL
Trigger: GAGGCTTTGCGTTCTCCTCCAGCCGCCTGTGCGGGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCTTCCCGACGGCTTaGGGGTGCCGGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGFPTA*GCRCHV
Trigger: GACATGACACCGGCACCCCCAAGCCGTCGGGAAGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCTGTTGTGGGAGACTaGGGCCTGTGTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAVVGD*GLCAPR
Trigger: CCTGGGGGCACACAGGCCCCAGTCTCCCACAACAGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTTGAAGACAGAACACTaGGTTTGGGGCAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLKTEH*VWGRRY
Trigger: GTACCGCCTGCCCCAAACCCAGTGTTCTGTCTTCAA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGAACCGCTTCCACGGTaGCCACAGCCGATTCCGCAC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKEPLPR*PQPIPH
Trigger: GTGCGGAATCGGCTGTGGCCACCGTGGAAGCGGTTC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGAACCGCTTCCACGGTaGCCACAGCCGATTCCGCAC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQEPLPR*PQPIPH
Trigger: GTGCGGAATCGGCTGTGGCCACCGTGGAAGCGGTTC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGCTGTGCCGGGCTCTaGGAGGAACCCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCCCAGL*EEPSSL
Trigger: CAGAGAGGAGGGTTCCTCCCAGAGCCCGGCACAGCA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATGCTGTGCCGGGCTCTaGGAGGAACCCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKCCAGL*EEPSSL
Trigger: CAGAGAGGAGGGTTCCTCCCAGAGCCCGGCACAGCA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCAGCATGGCTGGGACTaGCACCAAAAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWQHGWD*HQKARW
Trigger: CCACCTGGCCTTTTGGTGCCAGTCCCAGCCATGCTG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGACCTCCTGCTAGGGTaGGTGTTGGATACACAGGCG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHDLLLG*VLDTQA
Trigger: CGCCTGTGTATCCAACACCCACCCTAGCAGGAGGTC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCTCAAAGCTGGGTCCTaGGACCTCCTGCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLKAGS*DLLLGW
Trigger: CCACCCTAGCAGGAGGTCCCAGGACCCAGCTTTGAG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCTGTGCCTTGGCCCTaGGTTTTCTCGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAVPWP*VFSAWP
Trigger: TGGCCAAGCCGAGAAAACCCAGGGCCAAGGCACAGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGCTCACCCCGTTCTCTaGCTGAAGCTGGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLAHPVL*LKLVGC
Trigger: ACAGCCAACCAGCTTCAGCCAGAGAACGGGGTGAGC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCTGGGCTATCCCCTGTaGCCAGCAGTGGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLLGYPL*PAVACS
Trigger: TGAACAAGCCACTGCTGGCCACAGGGGATAGCCCAG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCTGGGCTATCCCCTGTaGCCAGCAGTGGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLLGYPL*PAVACS
Trigger: TGAACAAGCCACTGCTGGCCACAGGGGATAGCCCAG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCCCAGTATCTGTCGTaGCTTGGACGCCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPQYLS*LGRHLP
Trigger: AGGCAGATGGCGTCCAAGCCACGACAGATACTGGGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACTGCACCCTGTAGCGTaGGAGGCTCAGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVLHPVA*EAQWAQ
Trigger: CTGTGCCCACTGAGCCTCCCACGCTACAGGGTGCAG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGCGGCTGGCACTTTTaGGCTAGGGGCTCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGGWHF*ARGSRG
Trigger: GCCTCTAGAGCCCCTAGCCCAAAAGTGCCAGCCGCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGGCCTGGTCTGGTCTaGGCTTGGAGGCCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQWPGLV*AWRPES
Trigger: AGACTCCGGCCTCCAAGCCCAGACCAGACCAGGCCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATGGCCTGGTCTGGTCTaGGCTTGGAGGCCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVWPGLV*AWRPES
Trigger: AGACTCCGGCCTCCAAGCCCAGACCAGACCAGGCCA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTCATCTTCCCTGGCCTaGTCTGGTCTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSSSLA*SGLGLE
Trigger: CTCCAAGCCCAGACCAGACCAGGCCAGGGAAGATGA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGCACACAGAGCCTCCTaGTCAGTCTCCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCAHRAS*SVSAAP
Trigger: GGGTGCAGCGGAGACTGACCAGGAGGCTCTGTGTGC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATCTCCAGGTGGCTTCTaGGCCCCAGTCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVSPGGF*APVSPA
Trigger: TGCAGGGGAGACTGGGGCCCAGAAGCCACCTGGAGA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTGTCCGCCGGAGAGCTaGAAGTCTCGGGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHCPPES*KSRENP
Trigger: TGGGTTTTCCCGAGACTTCCAGCTCTCCGGCGGACA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCCACCCTGGGTGTCTaGGTTGTCCGGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSTLGV*VVREAL
Trigger: CAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTAGTCAAGCGACCGCCTaGAGGGAAGAGCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLSQATA*REELGE
Trigger: TTCTCCCAGCTCTTCCCTCCAGGCGGTCGCTTGACT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCGTCCTCGGGGCAGTaGGAGGGCAGCTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSSSGQ*EGSFSA
Trigger: TGCAGAGAAGCTGCCCTCCCACTGCCCCGAGGACGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGTTCTCTCTCCAGGCTaGGGGGCTCGGGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCVLSPG*GARGSH
Trigger: ATGTGAGCCCCGAGCCCCCCAGCCTGGAGAGAGAAC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGCACCTCAAAGTCCGTaGCACGGAGCGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCAPQSP*HGAAAG
Trigger: ACCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTACCTCCGAACACAGGTaGAGCAGGGCCGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCTSEHR*SRAGRE
Trigger: CTCTCTCCCGGCCCTGCTCCACCTGTGTTCGGAGGT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCTCCTGGTGGTTGGATaGCAGCTCACAACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLLVVG*QLTTSD
Trigger: ATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGTTTGGCTTTGGGGGTaGCGGGCTTCATCCCATTCT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEVWLWG*RASSHS
Trigger: AGAATGGGATGAAGCCCGCCACCCCCAAAGCCAAAC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGCTTGGCTGGGGTGGTaGCTGTCTCGCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCAWLGW*LSRSGA
Trigger: AGCTCCAGAGCGAGACAGCCACCACCCCAGCCAAGC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCCTTGGTGCAGCTCTTaGCTTGGGCTCGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCPWCSS*LGLERG
Trigger: TCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCTGGCCCTGGGACCTaGCCCTTTTTCCTCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAGPGT*PFFLFV
Trigger: TACGAAGAGGAAAAAGGGCCAGGTCCCAGGGCCAGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCGGGAGCACGCGGCTaGGAGTTGCCTGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSGARG*ELPASE
Trigger: CTCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCTGAGGAGGTCACTCTaGGCCTCGGCCGTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALLRRSL*ASAVRW
Trigger: CCACCGGACGGCCGAGGCCCAGAGTGACCTCCTCAG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAAACATTGGCTTCTGTaGTGTCGGTGCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEKHWLL*CRCPQG
Trigger: GCCCTGTGGGCACCGACACCACAGAAGCCAATGTTT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCGGGAACCCGGTTCCTaGGGTCAAGGTGTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPREPGS*GQGVLE
Trigger: CTCTAGCACACCTTGACCCCAGGAACCGGGTTCCCG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGGCCCCTCCGCACTTaGTTTGCGACACTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGPLRT*FATLRR
Trigger: CCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGGGGTGGCGCTTGGTaGGGTATAGTTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGGGAW*GIVGGG
Trigger: ACCTCCACCAACTATACCTCACCAAGCGCCACCCCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCACGCTCCCTGGGGCTaGTGGAAGGCAAACACCAGT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCHAPWG*WKANTS
Trigger: ACTGGTGTTTGCCTTCCATCAGCCCCAGGGAGCGTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACACGCTCCCTGGGGCTaGTGGAAGGCAAACACCAGT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVHAPWG*WKANTS
Trigger: ACTGGTGTTTGCCTTCCATCAGCCCCAGGGAGCGTG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCAACGCAAAGCCTCTGTaGATTCTGTGCTGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLNAKPL*ILCCPG
Trigger: CCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGTCTGGGAAGAGGGATaGGGACTCCAAGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQVWEEG*GLQGRW
Trigger: CCACCGACCTTGGAGTCCTCATCCCTCTTCCCAGAC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTATTCTCCAACGCGCGTaGGGTCAGCTGCCGAGAACG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCILQRA*GQLPRT
Trigger: CGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAAT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTTTTGGGACTGGCATTaGCTGAGGCGTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLFWDWH*LRRGCP
Trigger: CGGACAACCACGCCTCAGTCAATGCCAGTCCCAAAA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGAAGGCCGCCAGGCTaGTGTAGTTGCGGTCACACT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGRPPG*CSCGHT
Trigger: AGTGTGACCGCAACTACAGCAGCCTGGCGGCCTTCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACAGGAGACCGGGGCTTaGTCCCATTTCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKQETGA*SHFSRT
Trigger: TGTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCTGAGGGCTTGGGGTaGAGTTCTTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAEGLG*SSSRKQ
Trigger: CTGTTTCCTGGAAGAACTGCACCCCAAGCCCTCAGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGGAGGGTCGGCACATaGGAACGGCAGACCGGAGTC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGRVGT*ERQTGV
Trigger: GACTCCGGTCTGCCGTTCGCATGTGCCGACCCTCCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCTGCTGTCTCCTTCTaGCTGGCAAAGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPAVSF*LAKSSL
Trigger: AAGACTGGACTTTGCCAGGCAGAAGGAGACAGCAGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCAGGTGTCAGCTCCTaGAAGCCCAGGATGCCATCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAGVSS*KPRMPS
Trigger: AGATGGCATCCTGGGCTTGCAGGAGCTGACACCTGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCAGGTGTCAGCTCCTaGAAGCCCAGGATGCCATCT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAGVSS*KPRMPS
Trigger: AGATGGCATCCTGGGCTTGCAGGAGCTGACACCTGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGCTTGGACGCCATCTaGCTCTTCCAGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGLDAI*LFQRCP
Trigger: TGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCCGTTCTCTGTAGATaGAGGCTTCTTTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAVLCR*RLLFIA
Trigger: GGCTATAAAAAGAAGCCTGCATCTACAGAGAACGGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCAGAGACTGGAAGAATaGTCTCCTCCCGGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHQRLEE*SPPGAF
Trigger: GAAGGCTCCGGGAGGAGAGCATTCTTCCAGTCTCTG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCTGGAAGCACACTTTaGACTTGTAGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAGSTL*TCRRPA
Trigger: GGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTACCGCCAGGTGGCGCTaGAGCTTGAAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALTARWR*SLKGLG
Trigger: CCCCAAGCCCTTCAAGCTGCAGCGCCACCTGGCGGT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTGGTCTCAAAAGGGCTaGAGTGGCCCCGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHWSQKG*SGPVFH
Trigger: GTGAAAGACGGGGCCACTGCAGCCCTTTTGAGACCA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCACCATCCCACGGCTaGCTCAACTTACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPPSHG*LNLLPF
Trigger: GAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGTGGTCCTGGTAGCTaGGGTGTTGTCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGGPGS*GVVLQW
Trigger: CCACTGGAGGACAACACCCCAGCTACCAGGACCACC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCAGAATGTAGCGCTGTaGGGGGCTGCCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFQNVAL*GAALCP
Trigger: AGGGCAGAGGGCAGCCCCCCACAGCGCTACATTCTG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGTGTCTCGTCCAGGGTaGGCTTGGTCCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFVSRPG*AWSSSW
Trigger: CCAGCTCGAGGACCAAGCCCACCCTGGACGAGACAC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCTGGGGGCCTGGGGGTaGCGCTTGGTGAGGTATAGT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLGAWG*RLVRYS
Trigger: ACTATACCTCACCAAGCGCCACCCCCAGGCCCCCAG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTCCCCAGCCCATCCTaGGCTGAAGGTGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLPSPS*AEGGLS
Trigger: CGAAAGACCACCTTCAGCCCAGGATGGGCTGGGGAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTGGCCTGGGCTGGGCTaGCCGTTAAAGAACATACTC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLWPGLG*PLKNIL
Trigger: GAGTATGTTCTTTAACGGCCAGCCCAGCCCAGGCCA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTAGGGAAGGCCTTGGCTaGCTCTGGCTGGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCREGLG*LWLVVG
Trigger: ACCCACTACCAGCCAGAGCCAGCCAAGGCCTTCCCT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGAAAAGGGAAGGCCTTaGCTGGCTCTGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLEKGRP*LALAGS
Trigger: ACTACCAGCCAGAGCCAGCCAAGGCCTTCCCTTTTC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTAGGAAGGTCTTCGCGTaGCTGAGCAAGCCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRKVFA*LSKPAC
Trigger: ACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCCGGGTTGTCCGACTaGTACTCCATGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSGLSD*YSMPLS
Trigger: GCTCAACGGCATGGAGTACCAGTCGGACAACCCGGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGTGGCTCATCCTCTCTaGGACCCTGGGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQVAHPL*DPGSAP
Trigger: TGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCAC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAAGGTCTCGGTGTTGGTaGGGACCTGCAGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKRSRCW*GPAGDP
Trigger: AGGATCCCCTGCAGGTCCCCACCAACACCGAGACCT...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCTGAGGTCTCGGTGTTaGTGGGGACCTGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLRSRC*WGPAGD
Trigger: ATCCCCTGCAGGTCCCCACCAACACCGAGACCTCAG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCATCCTCGCCGTCCTaGCAAAGGCAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFASSPS*QRQELL
Trigger: CAGCAGCTCCTGCCTTTGCCAGGACGGCGAGGATGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCTGCCATAGAGGGGTaGGTCGAATCTGTCCACCGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAAIEG*VESVHR
Trigger: CCGGTGGACAGATTCGACCCACCCCTCTATGGCAGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCAAAGTCCAGTCTTaGAGGCTCCGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGKVQS*RLRLSA
Trigger: TGCAGAAAGCCGGAGCCTCCAAGACTGGACTTTGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTAAGTCAGGGGCCAGATaGACAGCAGGGCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLKSGAR*TAGLPK
Trigger: TTTTGGCAGCCCTGCTGTCCATCTGGCCCCTGACTT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGGCATCCAGAGGTaGAGCCCCGTCACCCTGAAA +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGGIQR*SPVTLK
Trigger: TTTCAGGGTGACGGGGCTCCACCTCTGGATGCCACC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGCATGGCTGGGACTaGCACCAAAAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQHGWD*HQKARW
Trigger: CCACCTGGCCTTTTGGTGCCAGTCCCAGCCATGCTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAAGCCACTCCAGGCCCTaGGAGCTGGAGCTGACGTAT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVSHSRP*ELELTY
Trigger: ATACGTCAGCTCCAGCTCCCAGGGCCTGGAGTGGCT...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTGGTTGGCTGTGCCTTaGCCCTGGGTTTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWWLAVP*PWVFSA
Trigger: AGCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCTCACCCCGTTCTCTaGCTGAAGCTGGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAHPVL*LKLVGC
Trigger: ACAGCCAACCAGCTTCAGCCAGAGAACGGGGTGAGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCATTGACTGAGGCGTaGTTGTCCGTGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFALTEA*LSVPPG
Trigger: CCCAGGGGGCACGGACAACCACGCCTCAGTCAATGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCTCCTGAAGGCTCATaGCTGCCCTGCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPPEGS*LPCFPC
Trigger: GCAAGGGAAGCAGGGCAGCCATGAGCCTTCAGGAGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGCCAGGGCTTCCTTaGGATCGCAGGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQPGLP*DRRGLL
Trigger: CAACAAGCCCCTGCGATCCCAAGGAAGCCCTGGCTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGCTGCTTGGGGCTGTaGTTCTTCCCAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPCCLGL*FFPSPV
Trigger: GACTGGGCTTGGGAAGAACCACAGCCCCAAGCAGCA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCTTGGCCCTTCCACTaGCCGTTCTCTGTAGATGCA +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAWPFH*PFSVDA
Trigger: TGCATCTACAGAGAACGGCCAGTGGAAGGGCCAAGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATTCTTCCTGGGCGGCTaGCACTTTTGGGCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKFFLGG*HFWARG
Trigger: GCCCCTAGCCCAAAAGTGCCAGCCGCCCAGGAAGAA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCATCCGATCTCCAGGTaGCTTCTGGGCCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCHPISR*LLGPSL
Trigger: GAGACTGGGGCCCAGAAGCCACCTGGAGATCGGATG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTACACACCCAACGCCTTaGTCTCTCTTGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLTHPTP*SLLVPR
Trigger: TCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGAGGATCCTTGGCACTaGAGCCAGAGGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPEDPWH*SQRHQE
Trigger: CTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTAAAGCTGGGCTGGGTTaGCAGCGGGAGCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFKAGLG*QREHRL
Trigger: AAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCACCTCAAAGTCCGTaGCACGGAGCGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAPQSP*HGAAAG
Trigger: ACCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTATGCTGTTCAGAAGGTaGGCGACAGCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCMLFRR*ATALLP
Trigger: GGGCAGCAGCGCTGTCGCCCACCTTCTGAACAGCAT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGAGCGCTTGCCCCTGTaGTGTTTGGGCGCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALERLPL*CLGAGS
Trigger: GGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCGGGCTGTCTTTCTTaGCTTCTCCCTCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPGCLS*LLPLAP
Trigger: GGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTTTCCCTCCGCATCTTaGCCTCTGGCTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALFPSAS*PLAPGR
Trigger: GCGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGTGCTTTGCTGGGGGTaGATGCTGCCGACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCVLCWG*MLPTCP
Trigger: AGGACAGGTCGGCAGCATCCACCCCCAGCAAAGCAC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTGCCACCTCCTGTCTTaGTGCCGGGGCGAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALCHLLS*CRGEGF
Trigger: GAAGCCCTCGCCCCGGCACCAAGACAGGAGGTGGCA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCTTCCCTTGGCCCCTTaGTGCAGCTCTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLPLAP*CSSWLG
Trigger: CCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTCACCAGCTTCCCTTaGCCCCTTGGTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLTSFP*PLGAAL
Trigger: AAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTCTCTCCCTTCTCCTTaGGACCTAGGCTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSLPSP*DLGSRG
Trigger: CCCACGGGAGCCTAGGTCCCAAGGAGAAGGGAGAGA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCTCTCCCTTCTCCTTaGGACCTAGGCTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSLPSP*DLGSRG
Trigger: CCCACGGGAGCCTAGGTCCCAAGGAGAAGGGAGAGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCTGGCCCTGGGACCTaGCCCTTTTTCCTCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAGPGT*PFFLFV
Trigger: TACGAAGAGGAAAAAGGGCCAGGTCCCAGGGCCAGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCAGGTTCAGCACCGTaGACAGCTGTGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKAGSAP*TAVPLL
Trigger: CAAGAGGGGCACAGCTGTCCACGGTGCTGAACCTGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACTCTGCCCGAAGAGCTaGCTGAGGAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVLCPKS*LRRSLW
Trigger: CCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAGAGCAAATGGAGGCTaGCATGACCCTGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERANGG*HDPVVR
Trigger: TCTGACCACAGGGTCATGCCAGCCTCCATTTGCTCT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCGGAGGCGTTTTGAATaGCCTACAACACCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSRRRFE*PTTPSR
Trigger: TCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp TTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTaGCGACACTCCGGAGGCGTTTTGAATGGCCTACAA +
Preference number: 4 (lower is better)
Translates to: FTVQPQGPSALG*RHSGGVLNGLQ
Trigger: TTGTAGGCCATTCAAAACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCAGTGGCCCATTGGTaGATGCGTGCCCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPVAHW*MRAQPH
Trigger: ATGTGGCTGGGCACGCATTCACCAATGGGCCACTGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTCATTCCGTTGTAGGTaGACAGTGCTGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQSFRCR*TVLGSR
Trigger: GCGGCTCCCCAGCACTGTTCACCTACAACGGAATGA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCGCGAAGACGTCGATaGAGCTGCTGTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPRRRR*SCCRSP
Trigger: CGGAGATCGACAGCAGCTTCATCGACGTCTTCGCGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTATTCTCCAACGCGCGTaGGGTCAGCTGCCGAGAACG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFILQRA*GQLPRT
Trigger: CGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAAT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGGGTGTCCCCACTGTaGGTGCAGGTTACAGCACTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGVSPL*VQVTAL
Trigger: CAGTGCTGTAACCTGCACTCACAGTGGGGACACCCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCAGACACCTTCCTCTaGTCGGCTGTGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPDTFL*SAVGPA
Trigger: AGCAGGGCCCACAGCCGATCAGAGGAAGGTGTCTGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCCTCGAGCTGGCGATaGCCAGAATGTAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSSSWR*PECSAV
Trigger: CACAGCGCTACATTCTGGGCATCGCCAGCTCGAGGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCCTGCCCTGGAAAGTaGCTCTGGGGTAGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFACPGK*LWGREL
Trigger: TAGCTCCCTACCCCAGAGGCACTTTCCAGGGCAGGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCTCCCAGCCCATCTaGGGGAAAAGGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGSQPI*GKREGL
Trigger: AAGGCCTTCCCTTTTCCCGCAGATGGGCTGGGAGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCGGAACAGCTTCAACTaGTTCCCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCRNSFN*FPLLCC
Trigger: GCAGCAGAGGAGGGGGAAGCAGTTGAAGCTGTTCCG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGGGTTAGCCACGGGTaGCAGAAATTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGVSHG*QKFSRL
Trigger: CAGCCTGGAGAATTTCTGGCACCCGTGGCTAACCCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGCTGAGGGCTTGGGGTaGAGTTCTTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWAEGLG*SSSRKQ
Trigger: CTGTTTCCTGGAAGAACTGCACCCCAAGCCCTCAGC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGTTCCTGGTCGGGGCTaGACTTTGCTAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQVPGRG*TLLNSR
Trigger: CCGGGAGTTTAGCAAAGTGCAGCCCCGACCAGGAAC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACTGATGTCCGGCCACTaGAGGGAGAGTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLMSGH*RESCHL
Trigger: CAGGTGACAACTCTCCCTGCAGTGGCCGGACATCAG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTACTTCGGCTGTGGGCTaGTGTCAAGGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALTSAVG*CQGQRQ
Trigger: CTGGCGCTGGCCTTGACAGCAGCCCACAGCCGAAGT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCTGGAATTCTTAAAGTaGTGTCTTTGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLEFLK*CLWGCP
Trigger: GGGACACCCCCAAAGACAGCACTTTAAGAATTCCAG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGAAGTCACTGGCTGTaGTGCTTGGGGCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGSHWL*CLGLWF
Trigger: GAACCACAGCCCCAAGCAGCACAGCCAGTGACTTCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCTGTGAGCTCGCCGTaGCCTCGAAGTCTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPVSSP*PRSLRS
Trigger: GCTTCTTAGACTTCGAGGGCACGGCGAGCTCACAGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCTGGAAGCACACTTTaGACTTGTAGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKAGSTL*TCRRPA
Trigger: GGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTGGCGAAGGTGTAGTTaGAGGAGCTGCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQWRRCS*RSCRRR
Trigger: CCTTCGCCTGCAGCTCCTGCAACTACACCTTCGCCA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCCATCCCTTGGTGGTaGTGGGAGCCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALAIPWW*WEPPPN
Trigger: GTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCAAGGCCTGAGCAGTTaGACAAGAAGTCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSQGLSS*TRSQVA
Trigger: GGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCTGAGGGGATGGGCTaGTGTCTCTTCAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAEGMG*CLFKYL
Trigger: CAAGTACTTGAAGAGACAGCAGCCCATCCCCTCAGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCATGCAGGTGCCCGTaGCCTCGACAAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPCRCP*PRQAMV
Trigger: CACCATGGCTTGTCGAGGGCACGGGCACCTGCATGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTCCTGGAAGCACCTGTaGAAGCCAAGCTCTTCGGCG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSWKHL*KPSSSA
Trigger: CGCCGAAGAGCTTGGCTTCCACAGGTGCTTCCAGGA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTAAAGCTGGAGGGTaGCTCCTGGAAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGKAGG*LLEAPV
Trigger: CACAGGTGCTTCCAGGAGCCACCCTCCAGCTTTACC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGAAGGGTTTTGTGCTaGCCCCATGCAGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGRVLC*PHAVPG
Trigger: TCCCGGCACTGCATGGGGCCAGCACAAAACCCTTCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTGGTGTCCACCCCACTaGCTCTGTACGCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALWCPPH*LCTPAL
Trigger: CAGGGCAGGCGTACAGAGCCAGTGGGGTGGACACCA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCTGGCTGAGGGCTTaGGGTGCAGTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPWLRA*GAVLPG
Trigger: TCCTGGAAGAACTGCACCCCAAGCCCTCAGCCAGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCTGCAGAATGTCCCTaGGCAGCATGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPAECP*AAWLGL
Trigger: CAGTCCCAGCCATGCTGCCCAGGGACATTCTGCAGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATACACAGGCGGGACTTaGCACAGGGACCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVYTGGT*HRDQPS
Trigger: GCTTGGTTGGTCCCTGTGCCAAGTCCCGCCTGTGTA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTGGGTTTTCTCGGCTTaGCCAAGCAAGCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLWVFSA*PSKPQC
Trigger: ACATTGGGGCTTGCTTGGCCAAGCCGAGAAAACCCA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATGGTTGGCTGTGCCTTaGCCCTGGGTTTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVWLAVP*PWVFSA
Trigger: AGCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGAAGGCGAGGTAAGTaGGTCTTCACGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGRRGK*VFTGQG
Trigger: CCCCTGCCCCGTGAAGACCCACTTACCTCGCCTTCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGTATCTGTCGTGGCTTaGACGCCATCTGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWVSVVA*TPSASS
Trigger: GGAAGAGGCAGATGGCGTCCAAGCCACGACAGATAC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGAGAATACGAGGAGTaGCCCCTGGGCATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGEYEE*PLGILS
Trigger: TGACAGGATGCCCAGGGGCCACTCCTCGTATTCTCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACAGACTGGAAGTCACTaGCTGTGCTGCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKQTGSH*LCCLGL
Trigger: CAGCCCCAAGCAGCACAGCCAGTGACTTCCAGTCTG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCCTGGGGAGTCTGGTaGGAGGCATTTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPWGVW*EAFLWL
Trigger: AAGCCACAGAAATGCCTCCCACCAGACTCCCCAGGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGTCTGGTCTGGGCTTaGAGGCCGGAGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGLVWA*RPESSH
Trigger: ATGTGAAGACTCCGGCCTCCAAGCCCAGACCAGACC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTCATCTTCCCTGGCCTaGTCTGGTCTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSSSLA*SGLGLE
Trigger: CTCCAAGCCCAGACCAGACCAGGCCAGGGAAGATGA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGACTTCCCCTCTGAGTaGCTAGGAGAGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQDFPSE*LGESTV
Trigger: CACCGTGGACTCTCCTAGCCACTCAGAGGGGAAGTC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGACTTCCCCTCTGAGTaGCTAGGAGAGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKDFPSE*LGESTV
Trigger: CACCGTGGACTCTCCTAGCCACTCAGAGGGGAAGTC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGAGAGGCTGCGTAACTaGCCATTGCAGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKERLRN*PLQGMV
Trigger: GACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCATCCGATCTCCAGGTaGCTTCTGGGCCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFHPISR*LLGPSL
Trigger: GAGACTGGGGCCCAGAAGCCACCTGGAGATCGGATG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGTCCGCCGGAGAGCTaGAAGTCTCGGGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCCPPES*KSRENP
Trigger: TGGGTTTTCCCGAGACTTCCAGCTCTCCGGCGGACA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGTCAAGCGACCGCCTaGAGGGAAGAGCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSQATA*REELGE
Trigger: TTCTCCCAGCTCTTCCCTCCAGGCGGTCGCTTGACT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTGTGCAGCTCAGGAATaGCCTCCGGCCGATCGTCCT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFCAAQE*PPADRP
Trigger: AGGACGATCGGCCGGAGGCCATTCCTGAGCTGCACA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGAGGCTGCGGAAGCGCTaGAAGCACACTTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWRLRKR*KHTLHL
Trigger: CAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCAGCCT...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGTGCTTGTTCATGTaGCGGTCGAACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHRCLFM*RSNCSF
Trigger: GAAGGAGCAGTTCGACCGCCACATGAACAAGCACCT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTATCAGCCAAGGCAGCTaGGAAGGGAGACAGAGACGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCISQGS*EGRQRR
Trigger: CCGTCTCTGTCTCCCTTCCCAGCTGCCTTGGCTGAT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCAGTAGGTGGTCTTCCTaGAAATGGTCAGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSRWSS*KWSGAH
Trigger: GTGTGCCCCTGACCATTTCCAGGAAGACCACCTACT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTGGGGAAGCTGGGCTTaGCTGGGGTGGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALWGSWA*LGWWLS
Trigger: AGACAGCCACCACCCCAGCCAAGCCCAGCTTCCCCA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCTCACCAGCTTCCCTTaGCCCCTTGGTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLTSFP*PLGAAL
Trigger: AAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCAAGTGGCCACAGAGTaGACCATCTCAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFQVATE*TISGSR
Trigger: CCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTGCCTTCCCCCACGTaGTTTCTAAGGTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLPSPT*FLRSLW
Trigger: CCAAAGTGACCTTAGAAACCACGTGGGGGAAGGCAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCGGAGGCGTTTTGAATaGCCTACAACACCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSERRRFE*PTTPSR
Trigger: TCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp ATCACCACCTCAGCTCTGACATCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGCCACAGAGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: ITTSALTSRPEQ*HKKSSGHRVDH
Trigger: ATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAAACGCAAAGCCTCTGTaGATTCTGTGCTGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKNAKPL*ILCCPG
Trigger: CCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTT...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCTTATTCTTAGGAAATaGAAGTTCCTGGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSLILRK*KFLVGA
Trigger: AGCCCCGACCAGGAACTTTCATTTCCTAAGAATAAG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTCACCACCTCAGCTCTaGCATCAAGGCCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQSPPQL*HQGLSS
Trigger: ACTGCTCAGGCCTTGATGTCAGAGCTGAGGTGGTGA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCCTGCTGTCTCCTTCTaGCTGGCAAAGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWPAVSF*LAKSSL
Trigger: AAGACTGGACTTTGCCAGGCAGAAGGAGACAGCAGG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCGTCACCCTGAAATaGCAAGTCAGGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPVTLK*QVRGQM
Trigger: CATCTGGCCCCTGACTTGGCATTTCAGGGTGACGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGTGGAGGTGCCCACCTaGTCTGCCTGCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALVEVPT*SACRMS
Trigger: GGACATTCTGCAGGCAGAGCAGGTGGGCACCTCCAC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCCCCAATGTCCATCTaGCTCCAGCCCCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALAPMSI*LQPQLM
Trigger: CATCAGCTGGGGCTGGAGGCAGATGGACATTGGGGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTGCCCTGCTTCCCTTaGATTTCTCTAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLPCFP*ISLAGL
Trigger: CAGTCCTGCTAGAGAAATGCAAGGGAAGCAGGGCAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTTCACATCTACCTCATaGTCAGTAGGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLFTSTS*SVGLGG
Trigger: CCCTCCAAGCCCTACTGAGCATGAGGTAGATGTGAA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCGCTCCCAGACTCTTTaGACACACCCAACGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFRSQTL*THPTPW
Trigger: CCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTATGTGGCGGTCGAACTaGTCCTTCTTGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCMWRSN*SFLAKV
Trigger: CACCTTCGCCAAGAAGGAGCAGTTCGACCGCCACAT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCACCATCCCACGGCTaGCTCAACTTACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPPSHG*LNLLPF
Trigger: GAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCTTGGTCCTCGAGCTaGCGATGCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAWSSS*RCPECS
Trigger: GCTACATTCTGGGCATCGCCAGCTCGAGGACCAAGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCTGGAGGGTGGCTCCTaGAAGCACCTGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALLEGGS*KHLWKP
Trigger: TGGCTTCCACAGGTGCTTCCAGGAGCCACCCTCCAG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGAAGGCAAACACCAGTaGCCCATTGGTGAATGCGTG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPEGKHQ*PIGECV
Trigger: CACGCATTCACCAATGGGCCACTGGTGTTTGCCTTC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGAAAAGGGAAGGCCTTaGCTGGCTCTGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCEKGRP*LALAGS
Trigger: ACTACCAGCCAGAGCCAGCCAAGGCCTTCCCTTTTC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCAGTTTCAGGCTCCTTaGCCTCCTGGGGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQQFQAP*PPGESP
Trigger: TGGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGTTTCAGGCTCCTTaGCCTCCTGGGGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQFQAP*PPGESP
Trigger: TGGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTACAGAACACTGGGTTTaGGGCAGGCGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCTEHWV*GRRYLR
Trigger: CCTCAAGTACCGCCTGCCCCAAACCCAGTGTTCTGT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTAGCCAGCCAGGTCTTTaGGTCCGAGGAACAACTCAC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSQPGL*VRGTTH
Trigger: GTGAGTTGTTCCTCGGACCCAAAGACCTGGCTGGCT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCCTGGCTGAGGGCTTaGGGTGCAGTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPWLRA*GAVLPG
Trigger: TCCTGGAAGAACTGCACCCCAAGCCCTCAGCCAGGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCCGGCTTTCTGCACTaGCTGAAAATGGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSGFLH*LKMEVG
Trigger: GCCAACTTCCATTTTCAGCCAGTGCAGAAAGCCGGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGGCAAAGTCCAGTCTTaGAGGCTCCGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVGKVQS*RLRLSA
Trigger: TGCAGAAAGCCGGAGCCTCCAAGACTGGACTTTGCC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCTGCAGAATGTCCCTaGGCAGCATGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPAECP*AAWLGL
Trigger: CAGTCCCAGCCATGCTGCCCAGGGACATTCTGCAGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTACACAGGCGGGACTTaGCACAGGGACCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFYTGGT*HRDQPS
Trigger: GCTTGGTTGGTCCCTGTGCCAAGTCCCGCCTGTGTA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGGGTTTTCTCGGCTTaGCCAAGCAAGCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPWVFSA*PSKPQC
Trigger: ACATTGGGGCTTGCTTGGCCAAGCCGAGAAAACCCA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGTATCTGTCGTGGCTTaGACGCCATCTGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCVSVVA*TPSASS
Trigger: GGAAGAGGCAGATGGCGTCCAAGCCACGACAGATAC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCGGGCAGTATTGCTTaGAGAATACGAGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVAGSIA*RIRGVA
Trigger: GGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGTCTGGTCTGGGCTTaGAGGCCGGAGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGLVWA*RPESSH
Trigger: ATGTGAAGACTCCGGCCTCCAAGCCCAGACCAGACC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTTGCAGGGGATGGTCTaGAGCCGCGCCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLQGMV*SRAHLK
Trigger: TTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGACCATCCATCCTCCCTaGACACAGCATCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQTIHPP*TQHPIS
Trigger: GGAGATCGGATGCTGTGTCCAGGGAGGATGGATGGT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGAGGATCCTTGGCACTaGAGCCAGAGGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFEDPWH*SQRHQE
Trigger: CTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTATGCTGTTCAGAAGGTaGGCGACAGCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALMLFRR*ATALLP
Trigger: GGGCAGCAGCGCTGTCGCCCACCTTCTGAACAGCAT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCAACCTCTGATCGGGTaGGTCACGGGGTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALQPLIG*VTGSTG
Trigger: GCCTGTAGACCCCGTGACCCACCCGATCAGAGGTTG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGACACTCCTGGTGGTTaGATGGCAGCTCACAACCTC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCDTPGG*MAAHNL
Trigger: GAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTATCAGCCAAGGCAGCTaGGAAGGGAGACAGAGACGG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFISQGS*EGRQRR
Trigger: CCGTCTCTGTCTCCCTTCCCAGCTGCCTTGGCTGAT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCCCACCGCCTTCCTTaGGTGCACTGGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPHRLP*VHWELE
Trigger: CTCAAGTTCCCAGTGCACCCAAGGAAGGCGGTGGGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGTTTGGCTTTGGGGGTaGCGGGCTTCATCCCATTCT +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVVWLWG*RASSHS
Trigger: AGAATGGGATGAAGCCCGCCACCCCCAAAGCCAAAC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCATCCTCGGACAGGTaGCTCATAAGAGCAACGCTA +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSSSDR*LIRATL
Trigger: TAGCGTTGCTCTTATGAGTCACCTGTCCGAGGATGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTTGCTCCTTTGCAGCTaGCTTTCTAATTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHLLLCS*LSNSVT
Trigger: GGTCACCGAATTAGAAAGTCAGCTGCAAAGGAGCAA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCTTTCTGCACTGGCTaGAAATGGAAGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVAFCTG*KWKLAP
Trigger: GGGAGCCAACTTCCATTTTCAGCCAGTGCAGAAAGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGTCTTCACTTTCTTGTaGGCTGGCGGCCTCCTTATT +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWVFTFL*AGGLLI
Trigger: AATAAGGAGGCCGCCAGCTCACAAGAAAGTGAAGAC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGCTGGGGTCTCCCCGTaGGTGATTTGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALAGVSP*VIWSLL
Trigger: AAGGAGAGACCAAATCACTCACGGGGAGACCCCAGC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGAGCCGCGCCCATCTaGAATCACATCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGAAPI*NHISRD
Trigger: GTCTCTGCTGATGTGATTTCAGATGGGCGCGGCTCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAATCTCAAACTTGGTGCTaGGCACCTCAAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKSQTWC*APQSPW
Trigger: CCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGA...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCTTTAAAGGGATTTTaGAGCCAGTTAGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSLKGF*SQLVSA
Trigger: GGCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCTGACATCAAGGCCTaGGCAGTTGCACAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSDIKA*AVAQEV
Trigger: GACTTCTTGTGCAACTGCTCAGGCCTTGATGTCAGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCAGCCTGTTCTTCTGCTaGACGATCTTCAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSLFFC*TIFRMS
Trigger: GCTCATTCTGAAGATCGTGCAGCAGAAGAACAGGCT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437464.1
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTGTTCGCAGACAGGCTaGCATAGAGGGGTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALCSQTG*HRGVGR
Trigger: TCGACCCACCCCTCTATGGCAGCCTGTCTGCGAACA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTACAGGGGAGAAGGGCTaGATGTCCCGGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALTGEKG*MSRMEG
Trigger: TCCTTCCATCCGGGACATGCAGCCCTTCTCCCCTGT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGAGGCCCCCGCCGGTaGAAACTCATTACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALGGPRR*KLITLK
Trigger: TTTGAGGGTAATGAGTTTGCACCGGCGGGGGCCTCC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCTGATGTCCGGCCACTaGAGGGAGAGTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALLMSGH*RESCHL
Trigger: CAGGTGACAACTCTCCCTGCAGTGGCCGGACATCAG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCTGCCCTGCTTCCCTTaGATTTCTCTAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLPCFP*ISLAGL
Trigger: CAGTCCTGCTAGAGAAATGCAAGGGAAGCAGGGCAG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTGAAGGCTCATGGCTaGCCTGCTTCCCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLKAHG*PASLAF
Trigger: AAATGCAAGGGAAGCAGGGCAGCCATGAGCCTTCAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCTGGAATTCTTAAAGTaGTGTCTTTGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLLEFLK*CLWGCP
Trigger: GGGACACCCCCAAAGACAGCACTTTAAGAATTCCAG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTTTTCCTCTTCGTACTaGTCTCTCCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLFSSSY*SLPSPW
Trigger: CCAAGGAGAAGGGAGAGAGCAGTACGAAGAGGAAAA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACTTTTCCTCTTCGTACTaGTCTCTCCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHFSSSY*SLPSPW
Trigger: CCAAGGAGAAGGGAGAGAGCAGTACGAAGAGGAAAA...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGGGGAACGGGAGGTTGTaGAAATCTCCAAACATTGGC +
Preference number: 4 (lower is better)
Translates to: TSLLHVGEREVVQISKHWGNGRL*KSPNIG
Trigger: GCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCC...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTTTCGGGAAGGATTTTaGTCAGGCTCTTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWFREGF*SGSCVN
Trigger: GTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATTGAAGACAGAACACTaGGTTTGGGGCAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVLKTEH*VWGRRY
Trigger: GTACCGCCTGCCCCAAACCCAGTGTTCTGTCTTCAA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGAAATGAAAGTTCCTaGTCGGGGCTGCACTTTGCT +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGNESS*SGLHFA
Trigger: AGCAAAGTGCAGCCCCGACCAGGAACTTTCATTTCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCATTTCTGTGGCTTTaGGGGGAGTCAGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKAFLWL*GESDWK
Trigger: CTTCCAGTCTGACTCCCCCCAAAGCCACAGAAATGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCCTGGGGAGTCTGGTaGGAGGCATTTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPWGVW*EAFLWL
Trigger: AAGCCACAGAAATGCCTCCCACCAGACTCCCCAGGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTAGGTGCTTGTTCATGTaGCGGTCGAACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCRCLFM*RSNCSF
Trigger: GAAGGAGCAGTTCGACCGCCACATGAACAAGCACCT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTAGTAGGTGGTCTTCCTaGAAATGGTCAGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCSRWSS*KWSGAH
Trigger: GTGTGCCCCTGACCATTTCCAGGAAGACCACCTACT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGACTTTCTAATTCGGTaGCCAATTTCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: CCALGGPGGSEATLLSSEDFLIR*PISGSP
Trigger: TGGAGATCCAGAAATTGGTCACCGAATTAGAAAGTC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTACCTCCTTCTCTTTCTaGAGTAGGTGGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCTSFSF*SRWSSW
Trigger: CCAGGAAGACCACCTACTTCAGAAAGAGAAGGAGGT...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTACCTCCTTCTCTTTCTaGAGTAGGTGGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCTSFSF*SRWSSW
Trigger: CCAGGAAGACCACCTACTTCAGAAAGAGAAGGAGGT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGAGGCGGTCTGGGCCTaGTTTGGTCTCTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVEAVWA*FGLFQI
Trigger: TATTTGAAAGAGACCAAATCAGGCCCAGACCGCCTC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGAGGCGGTCTGGGCCTaGTTTGGTCTCTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKEAVWA*FGLFQI
Trigger: TATTTGAAAGAGACCAAATCAGGCCCAGACCGCCTC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCGCCGCACAACTTCCTaGGGAATGAGAATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRRTTS*GMRISW
Trigger: CCAAGAAATTCTCATTCCTCAGGAAGTTGTGCGGCG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGATGGACAGCAGGGCTaGCAAAAGCTTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALDGQQG*QKLLEQ
Trigger: CTGCTCCAGAAGCTTTTGGCAGCCCTGCTGTCCATC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCTGAAGGCTCATGGCTaGCCTGCTTCCCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLKAHG*PASLAF
Trigger: AAATGCAAGGGAAGCAGGGCAGCCATGAGCCTTCAG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTTCACATCTACCTCATaGTCAGTAGGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCFTSTS*SVGLGG
Trigger: CCCTCCAAGCCCTACTGAGCATGAGGTAGATGTGAA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCAGAAAGCACAGGTCTTaGATCTCAAACTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRKHRS*ISNLVL
Trigger: CAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCT...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGAGAGATCAGGAAAATaGCTAGGCAGCATCGGGGAT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCERSGK*LGSIGD
Trigger: ATCCCCGATGCTGCCTAGCCATTTTCCTGATCTCTC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTCGGTGACCAATTTCTaGATCTCCAGTTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPSVTNF*ISSSSS
Trigger: CGAGGATGAACTGGAGATCCAGAAATTGGTCACCGA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTACCATCCATCCTCCCTaGACACAGCATCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALTIHPP*TQHPIS
Trigger: GGAGATCGGATGCTGTGTCCAGGGAGGATGGATGGT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTTCCTTGGGTGCACTaGGAACTTGAGTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLPWVH*ELECFA
Trigger: AGCAAAGCACTCAAGTTCCCAGTGCACCCAAGGAAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTAAGAAAACAGCTGTGTaGTCTCAAAAGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLKKTAV*SQKGCS
Trigger: ACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
3UTR CAA 72 bp AACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTaGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NLLPFSMWGNGR*CKSPNIGFCGV
Trigger: GACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTCTCAAACTTGGTGCTaGGCACCTCAAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALSQTWC*APQSPW
Trigger: CCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCTTTAAAGGGATTTTaGAGCCAGTTAGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSLKGF*SQLVSA
Trigger: GGCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCAAGGCCTGAGCAGTTaGACAAGAAGTCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALQGLSS*TRSQVA
Trigger: GGCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCGCCTGTTCTTCTGCTaGACGATCTTCAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFRLFFC*TIFRMS
Trigger: GCTCATTCTGAAGATCGTGCAGCAGAAGAACAGGCG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGAAGGCAAACACCAGTaGCCCATTGGTGAATGCGTG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALEGKHQ*PIGECV
Trigger: CACGCATTCACCAATGGGCCACTGGTGTTTGCCTTC...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCACAGCTTCTCTTTTCTaGAATCCTCTGGAATTCTTA +
Preference number: 4 (lower is better)
Translates to: SCTRSQVATEWTISGSRSTASLF*NPLEFL
Trigger: TAAGAATTCCAGAGGATTCCAGAAAAGAGAAGCTGT...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCGAACTGCTCCTTCTTaGCGAAGGTGTAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALRTAPS*RRCSCR
Trigger: CCTGCAACTACACCTTCGCCAAGAAGGAGCAGTTCG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCAAATCTCCAAACATTaGCTTCTGTGGTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCQISKH*LLWCRC
Trigger: GCACCGACACCACAGAAGCCAATGTTTGGAGATTTG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTAGAGCAAATGGAGGCTaGCATGACCCTGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALRANGG*HDPVVR
Trigger: TCTGACCACAGGGTCATGCCAGCCTCCATTTGCTCT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTTGCTCCTTTGCAGCTaGCTTTCTAATTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLLLCS*LSNSVT
Trigger: GGTCACCGAATTAGAAAGTCAGCTGCAAAGGAGCAA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR GCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCGGAGCCTGTTCTTCTaGTGCACGATCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALRSLFF*CTIFRM
Trigger: CATTCTGAAGATCGTGCAGCAGAAGAACAGGCTCCG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437464.1
CDS-3UTR GCA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAAGAAAGCACAGGTCTTaGATCTCAAACTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRKHRS*ISNLVL
Trigger: CAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCT...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTTTCGGGAAGGATTTTaGTCAGGCTCTTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPFREGF*SGSCVN
Trigger: GTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCGGTGACCAATTTCTaGATCTCCAGTTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSVTNF*ISSSSS
Trigger: CGAGGATGAACTGGAGATCCAGAAATTGGTCACCGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTTTCTAAGGTCACTTTaGAATTCCAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: STWYQENSCVVSKGLQWPFLRSL*NSSNSS
Trigger: GCTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR TCA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGACTTTCTAATTCGGTaGCCAATTTCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCDFLIR*PISGSP
Trigger: TGGAGATCCAGAAATTGGTCACCGAATTAGAAAGTC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACACAGCTTCTCTTTTCTaGAATCCTCTGGAATTCTTA +
Preference number: 4 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHTASLF*NPLEFL
Trigger: TAAGAATTCCAGAGGATTCCAGAAAAGAGAAGCTGT...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGGTCTGGGCCTGATTTaGTCTCTTTCAAATATCAAA +
Preference number: 4 (lower is better)
Translates to: QLTSLLHVGEREVVQISKGLGLI*SLSNIK
Trigger: TTTGATATTTGAAAGAGACCAAATCAGGCCCAGACC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CCA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTTTCTAAGGTCACTTTaGAATTCCAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALFLRSL*NSSNSS
Trigger: GCTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CTGGCGGCCGCTCCCGTCTCCAGGCTTCGAGACGGGCCACGGGCCTaGGGGCTCCTGCCGGGGCCCGGGCGAGACCCGCCCGGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LAAAPVSRLRDGPRA*GLLPGPGRDPPGSS
Trigger: CGAGGAGCCGGGCGGGTCTCGCCCGGGCCCCGGCAGGAGCCCTCAGGCCCGTGGCCCGTCTCGAAGCCTGGAGACGGGAGCGGCCGCCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGCTCCGCGGGGGCTCCCGGGTGTGGCCGGTGCTTCCTGGCCTTGTaGCGGCTCAGGCCCGGCCCGGAGCGGAAGGAGGCTGCGCAGACC +
Preference number: 5 (lower is better)
Translates to: GSAGAPGCGRCFLAL*RLRPGPERKEAAQT
Trigger: GGTCTGCGCAGCCTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp AAGGCCGCTGGGCTCGGCTCCGCGGGGGCTCCCGGGTGTGGCCGGTaGTTCCTGGCCTTGTGCCGGCTCAGGCCCGGCCCGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: KAAGLGSAGAPGCGR*FLALCRLRPGPERK
Trigger: CTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGCCGAGCCCAGCGGCCTT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGGGCTCGGCTCCGCGGGGGCTCCCGGGTGTGGCCGGTGCTTCCTaGCCTTGTGCCGGCTCAGGCCCGGCCCGGAGCGGAAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGSAPRGLPGVAGAS*PCAGSGPARSGRRL
Trigger: CAGCCTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGCCGAGCCCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGGGTGAGGGCGCAGGCTGGGTGGGCAGCGGGTAGGCAGGGCCCGTaGCCACGGCCTCCTCCGGCCACGCTCCCTGGGGCTGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: GVRAQAGWAAGRQGP*PRPPPATLPGADGR
Trigger: CCTTCCATCAGCCCCAGGGAGCGTGGCCGGAGGAGGCCGTGGGCACGGGCCCTGCCTACCCGCTGCCCACCCAGCCTGCGCCCTCACCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CTGCCCTCCAGGCCTCCGGGCAGGTCCCCCAAGGACCTCCGCGCCTaGCCCCTGCGGGCGAAGCGGACCGCGTGCTCACGCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LPSRPPGRSPKDLRA*PLRAKRTACSRRCS
Trigger: CGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGGGCAGGCGCGGAGGTCCTTGGGGGACCTGCCCGGAGGCCTGGAGGGCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGGCACTGCCGGGCATGGCCACCCTGCGCCGTTTGCTGGGCAGTGTaGCCTCGAGGGCCCGGGCCTTCTGTCCCGGCGCTCCCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GHCRAWPPCAVCWAV*PRGPGPSVPALPAS
Trigger: GGAGGCCGGGAGCGCCGGGACAGAAGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GTGGCGGTTCAGGCCACCTGGCTGGCCCTGGTAGCAGGGCAGGGGTaGGGGCGCAGGCTGGGTGGGCAGCGGGTAGGCAGGGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: VAVQATWLALVAGQG*GRRLGGQRVGRARA
Trigger: GGCACGGGCCCTGCCTACCCGCTGCCCACCCAGCCTGCGCCCTCACCCCTGCCCTGCTACCAGGGCCAGCCAGGTGGCCTGAACCGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCCTGTCCTCGCCGGGCCCAGGGGCACTGCCGGGCATGGCCACCCTaGGCCGTTTGCTGGGCAGTGTGCCCTCGAGGGCCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: ACPRRAQGHCRAWPP*AVCWAVCPRGPGPS
Trigger: AGAAGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCCCTGGGCCCGGCGAGGACAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCTCGTCCTCCTCGGACTCCGAGGCGAAGTCGTACTCGCGGAGCCTaGGGTCCTCAGCTCCGGGCCGGGGCCTCCCCGCCGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: ARPPRTPRRSRTRGA*GPQLRAGASPPPGS
Trigger: GCTCCCTGGCGGCGGGGAGGCCCCGGCCCGGAGCTGAGGACCGCAGGCTCCGCGAGTACGACTTCGCCTCGGAGTCCGAGGAGGACGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS GCA 90 bp CACGCCCAGGGCCCGGCCTTGCTCTGCGCGTGCCTCTCCTGCAGGTaGCCCCGCAGCAGCTCCCGCGAGCCAAACCTGCGCTCCACGCAC +
Preference number: 5 (lower is better)
Translates to: HAQGPALLCACLSCR*PRSSSREPNLRSTH
Trigger: GTGCGTGGAGCGCAGGTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp ATGCCGCACGCCCAGGGCCCGGCCTTGCTCTGCGCGTGCCTCTCCTaGAGGTGCCCCCGCAGCAGCTCCCGCGAGCCAAACCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: MPHAQGPALLCACLS*RCPRSSSREPNLRS
Trigger: GGAGCGCAGGTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CTTCTCCCTCTTGCCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTaGCGGCGGAGCGCTTGCCCCTGTGGTGTTTGGGCGCGGGTTCCG +
Preference number: 5 (lower is better)
Translates to: LLPLAPTGLPGSRRP*RRSACPCGVWARVP
Trigger: CGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCCGTGGGGCGCCGTGTaGGCGAGGCTTCCCGACGGC +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTPWGAV*ARLPDG
Trigger: GCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGCGGCCCCGTCTGGGTaGCTGGGGGTGCTGCGTGCC +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTAAPSG*LGVLRA
Trigger: GGCACGCAGCACCCCCAGCAACCCAGACGGGGCCGC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCCTCTCCTGCAGGTGCCCCCGCAGCAGCTCCCGCGAGCCAAACCTaGGCTCCACGCACATGTAGCAGGTGGGCGGCGGCGCGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: ASPAGAPAAAPASQT*APRTCSRWAAARAC
Trigger: ACACGCCCGCGCCGCCGCCCACCTGCTACATGTGCGTGGAGCGCAGGTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp ACCTCCTTCAGGCACATGCCGCACGCCCAGGGCCCGGCCTTGCTCTaGGCGTGCCTCTCCTGCAGGTGCCCCCGCAGCAGCTCCCGCGAG +
Preference number: 5 (lower is better)
Translates to: TSFRHMPHAQGPALL*ACLSCRCPRSSSRE
Trigger: CTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGACCACCCAGCAGGCTGCCCACACCTGGCGTTGGCGAGCTTCCGTaGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTTGGGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: GPPSRLPTPGVGELP*GAVLARLPDGLGVP
Trigger: CGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CGGCGACAGGGAAGAGCAGGTGCTGCCGGCCGTGTTGGTGGCCGGTaGCGGCAGTGGGGACTCGCTGGGGGAGGCTCCCACTACCCTCGG +
Preference number: 5 (lower is better)
Translates to: RRQGRAGAAGRVGGR*RQWGLAGGGSHYPR
Trigger: CCGAGGGTAGTGGGAGCCTCCCCCAGCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TTCAGGCACATGCCGCACGCCCAGGGCCCGGCCTTGCTCTGCGCGTaGCTCTCCTGCAGGTGCCCCCGCAGCAGCTCCCGCGAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: FRHMPHAQGPALLCA*LSCRCPRSSSREPN
Trigger: GTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCATGTGCCTGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGTTTCGCCCTCTCGCCCGGGCTGTCTTTCTTGGCTTCTCCCTCTTaGCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTGCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: GFALSPGLSFLASPS*PHGSPGLPAALPAE
Trigger: CTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGGGCGAGAGGGCGAAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGCATAACCGTGGCGCAGAGCTCGCAGGCATACAGCGGCGTGTGCTaGAGCTCCGGCCGCTCCAGCAGCCCGTGCGCCCCGCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: RITVAQSSQAYSGVC*SSGRSSSPCAPPRC
Trigger: ACACCTGGGCGGGGCGCACGGGCTGCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGCCTGCGAGCTCTGCGCCACGGTTATGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp ATGCGCATAACCGTGGCGCAGAGCTCGCAGGCATACAGCGGCGTGTaGTGCAGCTCCGGCCGCTCCAGCAGCCCGTGCGCCCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: MRITVAQSSQAYSGV*CSSGRSSSPCAPPR
Trigger: CCTGGGCGGGGCGCACGGGCTGCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGCCTGCGAGCTCTGCGCCACGGTTATGCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGTGTGCCCCCAGGACCACCCAGCAGGCTGCCCACACCTGGCGTTaGCGAGCTTCCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGG +
Preference number: 5 (lower is better)
Translates to: LCAPRTTQQAAHTWR*RASVGRRVGEASRR
Trigger: CCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTCCTGGGGGCACACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GTCCTCGTGGGGCACGGTGGCCTGGCAGGTGCGCCGTTGGGAGGGTaGCTCTGTGCCTGTGCCGAGCTCCACCCTGCCCACCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: VLVGHGGLAGAPLGG*LCACAELHPAHRLS
Trigger: GCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCAGGCGGGCTGGGCCCAGCGTGGGGTCACCGCCCTCCTCAAAGCTaGGCTGGGTTGGCAGCGGGAGCACCGGCTTCTCACAGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: AGGLGPAWGHRPPQS*AGLAAGAPASHSAS
Trigger: GGAAGCGCTGTGAGAAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCGGTGACCCCACGCTGGGCCCAGCCCGCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGCTGCGTGCCCGGGGTTTCGCCCTCTCGCCCGGGCTGTCTTTCTTaGCTTCTCCCTCTTGCCCCCACGGGTCTCCCGGGCTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: CCVPGVSPSRPGCLS*LLPLAPTGLPGSRR
Trigger: CCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGGGCGAGAGGGCGAAACCCCGGGCACGCAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCGAACACAGGTGGAGCAGGGCCGGGAGAGAGCCCTCACTCAGGATaGGGCTGCTTCCCCGGGGAGGAGGCCTGTCCTCGCCGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PNTGGAGPGESPHSG*GCFPGEEACPRRAQ
Trigger: CTGGGCCCGGCGAGGACAGGCCTCCTCCCCGGGGAAGCAGCCCCATCCTGAGTGAGGGCTCTCTCCCGGCCCTGCTCCACCTGTGTTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CCTCGGCCTGGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTGGCTaGGCAAGCCCGCGTGTGCGTCGGCAGGGACTCTGGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PRPGRPQLTGRSSRG*ASPRVRRQGLWGQR
Trigger: CCGCTGCCCCCAGAGTCCCTGCCGACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CAGCTGCCGAGAACGTGTCCTCGTGGGGCACGGTGGCCTGGCAGGTaGGCCGTTGGGAGGGTGGCTCTGTGCCTGTGCCGAGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: QLPRTCPRGARWPGR*AVGRVALCLCRAPP
Trigger: GGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCAGGGGCCGGCATCTCCAGGCCTCGCCAAGCCGCTGGGACCATGTaGAGCTCAGGAATGGCCTCCGGCCGATCGTCCTCGGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AGAGISRPRQAAGTM*SSGMASGRSSSGQW
Trigger: CCACTGCCCCGAGGACGATCGGCCGGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAGGCCTGGAGATGCCGGCCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCCAAGGACCTCCGCGCCTGCCCCCTGCGGGCGAAGCGGACCGCGTaGTCACGCAGGTGCTCGTTGTACATCCAGACGTCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PKDLRACPLRAKRTA*SRRCSLYIQTSATS
Trigger: GGAGGTGGCCGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGGGCAGGCGCGGAGGTCCTTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCGAGCTTCCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTTaGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGCTGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ASFRGAPCWRGFPTA*GCRCHVCWAAAALV
Trigger: TACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGCTGCCCACACCTGGCGTTGGCGAGCTTCCGTGGGGCGCCGTGTTaGCGAGGCTTCCCGACGGCTTGGGGGTGCCGGTGTCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: GCPHLALASFRGAPC*RGFPTAWGCRCHVC
Trigger: GCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CGGTGGCGATGCAGCCCTGCCTGGCTCCGTCTCAGCGGTGCCAGGTaGGCTCCTTGGCAGCTGTGGCTCGAGGGAACCGGCATCCTCGCC +
Preference number: 5 (lower is better)
Translates to: RWRCSPAWLRLSGAR*APWQLWLEGTGILA
Trigger: GGCGAGGATGCCGGTTCCCTCGAGCCACAGCTGCCAAGGAGCCCACCTGGCACCGCTGAGACGGAGCCAGGCAGGGCTGCATCGCCACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GAGAACGTGTCCTCGTGGGGCACGGTGGCCTGGCAGGTGCGCCGTTaGGAGGGTGGCTCTGTGCCTGTGCCGAGCTCCACCCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: ENVSSWGTVAWQVRR*EGGSVPVPSSTLPT
Trigger: GGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCAGCTCCCGCGAGCCAAACCTGCGCTCCACGCACATGTAGCAGGTaGGCGGCGGCGCGGGCGTGTGGGCCAGCTTGTGCAGGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AAPASQTCAPRTCSR*AAARACGPACAGPA
Trigger: AGCTGGACCTGCACAAGCTGGCCCACACGCCCGCGCCGCCGCCCACCTGCTACATGTGCGTGGAGCGCAGGTTTGGCTCGCGGGAGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TCTCCCGGGCTCCCGGCGGCCTTGCCGGCGGAGCGCTTGCCCCTGTaGTGTTTGGGCGCGGGTTCCGTGATGCTGTTCAGAAGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SPGLPAALPAERLPL*CLGAGSVMLFRRWA
Trigger: CGCCCACCTTCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCCCTGCCCGCCAGCCTaGAGGGAGCCTGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWEPCPPA*REPARG
Trigger: GCCCCTTGCAGGCTCCCTCAAGGCTGGCGGGCAGGG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGTGGCCAGCAGTGGCTaGTTCAGGCCGGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTVASSG*FRPGLD
Trigger: GTCCAGCCCCGGCCTGAACAAGCCACTGCTGGCCAC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCGGTGCAGCTCTTGGCTaGGGCTCGAGCGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTGAALG*GSSGEP
Trigger: AGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACC...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGTTGGCTGGGCTGCTGGACATCGGCGACAGGGAAGAGCAGGTGCTaGCGGCCGTGTTGGTGGCCGGTGACGGCAGTGGGGACTCGCTGG +
Preference number: 5 (lower is better)
Translates to: GWLGCWTSATGKSRC*RPCWWPVTAVGTRW
Trigger: CCAGCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCAGCCCAGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGGGGTTGGCTGGGCTGCTGGACATCGGCGACAGGGAAGAGCAGGTaGTGCCGGCCGTGTTGGTGGCCGGTGACGGCAGTGGGGACTCGC +
Preference number: 5 (lower is better)
Translates to: WGWLGCWTSATGKSR*CRPCWWPVTAVGTR
Trigger: GCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCAGCCCAGCCAACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCTCGAGGGAACCGGCATCCTCGCCGTCCTGGCAAAGGCAGGAGCTaGTGGCCGGCGGGGCATCCCTGGCTGAGGGCTTGGGGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ARGNRHPRRPGKGRS*WPAGHPWLRAWGAV
Trigger: AACTGCACCCCAAGCCCTCAGCCAGGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCCAGGACGGCGAGGATGCCGGTTCCCTCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGGGCACGGTGGCCTGGCAGGTGCGCCGTTGGGAGGGTGGCTCTGTaGCTGTGCCGAGCTCCACCCTGCCCACCGACTCAGCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: GARWPGRCAVGRVAL*LCRAPPCPPTQLLQ
Trigger: TTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGACAGGCCAGTAGCCCTGACGGCCACGCTGGGGGAGACGGCCCCTaGCAGAGGAGGAGAGGTGGCTCGGCCAGGAGACTCCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: GQASSPDGHAGGDGP*QRRRGGSARRLPQL
Trigger: AAGCTGTGGGAGTCTCCTGGCCGAGCCACCTCTCCTCCTCTGGCAGGGGCCGTCTCCCCCAGCGTGGCCGTCAGGGCTACTGGCCTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCTGGCCTTGTGCCGGCTCAGGCCCGGCCCGGAGCGGAAGGAGGCTaGGCAGACCTCACAGGTCACAGGCCCATGTGGAGCTTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: PGLVPAQARPGAEGG*ADLTGHRPMWSLAL
Trigger: AAGGGCCAAGCTCCACATGGGCCTGTGACCTGTGAGGTCTGCGCAGCCTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGCGGAAGCGCTGGAAGCACACTTTGCACTTGTAGGAGGCCCGCCTaGCCTTGGCCGGCCGGCCTCTGCCTTGGGCCCTCCCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CGSAGSTLCTCRRPA*PWPAGLCLGPSLPL
Trigger: CAGGGGCAGGGAGGGCCCAAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCAGGTCCAGCTCGCCCAGGCTGCGGAAGCGCTGGAAGCACACTTTaGACTTGTAGGAGGCCCGCCTGCCCTTGGCCGGCCGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: AGPARPGCGSAGSTL*TCRRPACPWPAGLC
Trigger: GCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCAGCCTGGGCGAGCTGGACCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGCTGGACATCGGCGACAGGGAAGAGCAGGTGCTGCCGGCCGTGTTaGTGGCCGGTGACGGCAGTGGGGACTCGCTGGGGGAGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: CWTSATGKSRCCRPC*WPVTAVGTRWGRLP
Trigger: TGGGAGCCTCCCCCAGCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTCCTTGGCAGCTGTGGCTCGAGGGAACCGGCATCCTCGCCGTCCTaGCAAAGGCAGGAGCTGCTGGCCGGCGGGGCATCCCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LLGSCGSREPASSPS*QRQELLAGGASLAE
Trigger: CTCAGCCAGGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCCAGGACGGCGAGGATGCCGGTTCCCTCGAGCCACAGCTGCCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GTGAGGTCAGCTGCCGAGAACGTGTCCTCGTGGGGCACGGTGGCCTaGCAGGTGCGCCGTTGGGAGGGTGGCTCTGTGCCTGTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: VRSAAENVSSWGTVA*QVRRWEGGSVPVPS
Trigger: GCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCCTCTTCCAGAGGTGCCCAGGCAGGAGAACAGGCCAGCAGCTGCTaGGGGCCGGGAGGGTCCCTGCAGGACGGAGATGCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSRGAQAGEQASSC*GPGGSLQDGDAGSC
Trigger: GCAGCTGCCAGCATCTCCGTCCTGCAGGGACCCTCCCGGCCCCCAGCAGCTGCTGGCCTGTTCTCCTGCCTGGGCACCTCTGGAAGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGCCCCTGGACTCCACCCTGGGTGTCTGGGTTGTCCGGGAGGCCCTaGAGGCAGCTGCTGGTGGTGCTGTCCGCCGGAGAGCTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GPWTPPWVSGLSGRP*RQLLVVLSAGELEV
Trigger: GACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp AGCGCTGGAAGCACACTTTGCACTTGTAGGAGGCCCGCCTGCCCTTaGCCGGCCGGCCTCTGCCTTGGGCCCTCCCTGCCCCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SAGSTLCTCRRPACP*PAGLCLGPSLPLQP
Trigger: AGGCTGCAGGGGCAGGGAGGGCCCAAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGGCTTGGGCTCGAGCGGGGAGCCTCTCTGGTGCAGGGCTCCGGCTaGGGAAGCTGGGCTTGGCTGGGGTGGTGGCTGTCTCGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: WLGLERGASLVQGSG*GSWAWLGWWLSRSG
Trigger: TCCAGAGCGAGACAGCCACCACCCCAGCCAAGCCCAGCTTCCCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCCGCTCGAGCCCAAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCCTGCTCACCAGCTTCCCTTGGCCCCTTGGTGCAGCTCTTGGCTTaGGCTCGAGCGGGGAGCCTCTCTGGTGCAGGGCTCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PCSPASLGPLVQLLA*ARAGSLSGAGLRLG
Trigger: CCCCAGCCGGAGCCCTGCACCAGAGAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGCCCACACCTGGCGTaGGCGAGCTTCCGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWECPHLA*ASFRGA
Trigger: CGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCCACGGGACCTCTGTTaGAGGTCTTGGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTPRDLC*RSWGPR
Trigger: CCTCGGCCCCCAAGACCTCAAACAGAGGTCCCGTGG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTGGCAGCCCGCAGGCTaGGTGGCGCTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWEWQPAG*VALPLW
Trigger: CCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCCA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GCAGGGCCCGTGCCCACGGCCTCCTCCGGCCACGCTCCCTGGGGCTaGTGGAAGGCAAACACCAGTGGCCCATTGGTGAATGCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: AGPVPTASSGHAPWG*WKANTSGPLVNACP
Trigger: TGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAGCCCCAGGGAGCGTGGCCGGAGGAGGCCGTGGGCACGGGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GTCTCGGGGCCGAGTGAGCAGCTCCAGGGGAAGAGAGGGCACCACTaGGGTCGCTGTGGCGGTTCAGGCCACCTGGCTGGCCCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: VSGPSEQLQGKRGHH*GRCGGSGHLAGPGS
Trigger: GCTACCAGGGCCAGCCAGGTGGCCTGAACCGCCACAGCGACCTCAGTGGTGCCCTCTCTTCCCCTGGAGCTGCTCACTCGGCCCCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TTCCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTTGGGGGTaGCGGTGTCATGTCTGCTGGGCGGCGGCTGCTCTGGTATCAGGA +
Preference number: 5 (lower is better)
Translates to: FRGAPCWRGFPTAWG*RCHVCWAAAALVSG
Trigger: TCCTGATACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGCGCCGTTGGGAGGGTGGCTCTGTGCCTGTGCCGAGCTCCACCCTaGCCACCGACTCAGCTTCTGCAAGCTCTCTCGGGGCCCCACGTG +
Preference number: 5 (lower is better)
Translates to: CAVGRVALCLCRAPP*PPTQLLQALSGPHV
Trigger: CACGTGGGGCCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGGTGGCCTGGCAGGTGCGCCGTTGGGAGGGTGGCTCTGTGCCTGTaGCGAGCTCCACCCTGCCCACCGACTCAGCTTCTGCAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: RWPGRCAVGRVALCL*RAPPCPPTQLLQAL
Trigger: GAGAGCTTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCACCCTCCATCACCCCAGGTCCCAGAGTGGCCAAGCGAGGCGGCTaGTCCCCGTCAGCCTCAGGCCCTCCTTCCACAGAGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: APSITPGPRVAKRGG*SPSASGPPSTERQW
Trigger: CCACTGCCTCTCTGTGGAAGGAGGGCCTGAGGCTGACGGGGAGCAGCCGCCTCGCTTGGCCACTCTGGGACCTGGGGTGATGGAGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGTGGTaGTGTCCGCCGGAGAGCTGGAAGTCTCGGGAAAACCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GCLGCPGGPGGSCWW*CPPESWKSRENPGG
Trigger: GCCCCCTGGGTTTTCCCGAGACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCGCGGGCGTGTGGGCCAGCTTGTGCAGGTCCAGCTCGCCCAGGCTaGGGAAGCGCTGGAAGCACACTTTGCACTTGTAGGAGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ARACGPACAGPARPG*GSAGSTLCTCRRPA
Trigger: GGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCAGCCTGGGCGAGCTGGACCTGCACAAGCTGGCCCACACGCCCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGCGCCTGCCCCCTGCGGGCGAAGCGGACCGCGTGCTCACGCAGGTaGTCGTTGTACATCCAGACGTCGGCCACCTCCTTCAGGCACATG +
Preference number: 5 (lower is better)
Translates to: RACPLRAKRTACSRR*SLYIQTSATSFRHM
Trigger: CATGTGCCTGAAGGAGGTGGCCGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGGGCAGGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGGACATCGGCGACAGGGAAGAGCAGGTGCTGCCGGCCGTGTTGGTaGCCGGTGACGGCAGTGGGGACTCGCTGGGGGAGGCTCCCACTA +
Preference number: 5 (lower is better)
Translates to: WTSATGKSRCCRPCW*PVTAVGTRWGRLPL
Trigger: TAGTGGGAGCCTCCCCCAGCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TTGCCCTCGGCCTGGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTaGCTGAGCAAGCCCGCGTGTGCGTCGGCAGGGACTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LPSAWASPANRKVFA*LSKPACASAGTLGA
Trigger: TGCCCCCAGAGTCCCTGCCGACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CGTCATCCTCCATGTCCAGGTCCGAGGCAGGGAGCGGGAAGGGGGTaGCGGCCAGGCTGGGCAGGAAGCCTGTCCTCAGGGGGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: RHPPCPGPRQGAGRG*RPGWAGSLSSGGRL
Trigger: AAGACGACCCCCTGAGGACAGGCTTCCTGCCCAGCCTGGCCGCCACCCCCTTCCCGCTCCCTGCCTCGGACCTGGACATGGAGGATGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCAGAGGCATCAGGAGTGGGGCCTTCAGGCCCCTGGACTCCACCCTaGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PEASGVGPSGPWTPP*VSGLSGRPWRQLLV
Trigger: CACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCCACTCCTGATGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGAGTCATCGGCAGGGGCCGGCATCTCCAGGCCTCGCCAAGCCGCTaGGACCATGTGCAGCTCAGGAATGGCCTCCGGCCGATCGTCCTC +
Preference number: 5 (lower is better)
Translates to: GVIGRGRHLQASPSR*DHVQLRNGLRPIVL
Trigger: GAGGACGATCGGCCGGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAGGCCTGGAGATGCCGGCCCCTGCCGATGACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGGCGGCCAGGCTGGGCAGGAAGCCTGTCCTCAGGGGGTCGTCTTTaGCCTCGGCCTGGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGT +
Preference number: 5 (lower is better)
Translates to: WRPGWAGSLSSGGRL*PRPGRPQLTGRSSR
Trigger: ACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGAGGACAGGCTTCCTGCCCAGCCTGGCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCCGACGGCTTGGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGCTaGTCTGGTATCAGGAGACCGGGGCTTGCTCCCATTTCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PDGLGVPVSCLLGGG*SGIRRPGLAPISPA
Trigger: TGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGCCCTCTCTGGAGTCCGGCCCTCAGATCCACTTCGGCTGTGGGCTaGTGTCAAGGCCAGCGCCAGGGACTCCCTATTAGGGGACGGGGG +
Preference number: 5 (lower is better)
Translates to: RPLWSPALRSTSAVG*CQGQRQGLPIRGRG
Trigger: CCCCCGTCCCCTAATAGGGAGTCCCTGGCGCTGGCCTTGACAGCAGCCCACAGCCGAAGTGGATCTGAGGGCCGGACTCCAGAGAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGTGCTCGTTGTACATCCAGACGTCGGCCACCTCCTTCAGGCACATaGCGCACGCCCAGGGCCCGGCCTTGCTCTGCGCGTGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GARCTSRRRPPPSGT*RTPRARPCSARASP
Trigger: AGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGGTGGCCGACGTCTGGATGTACAACGAGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGGGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTGGTGGTaGTGGGAGCCACCTCCGAACACAGGTGGAGCAGGGCCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RGLQASLGSRAIPWW*WEPPPNTGGAGPGE
Trigger: CTCTCCCGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGCGGGCTTCATCCCATTCTCTGTGCCACGGGCCAGCTCCCCGGGTaGCAGGCTCCCCACCGCCTTCCTTGGGTGCACTGGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: GGLHPILCATGQLPG*QAPHRLPWVHWELE
Trigger: CTCAAGTTCCCAGTGCACCCAAGGAAGGCGGTGGGGAGCCTGGCACCCGGGGAGCTGGCCCGTGGCACAGAGAATGGGATGAAGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGCTCCTGGAAGCACCTGTGGAAGCCAAGCTCTTCGGCGGCGGGTTaGGCCTCAGTCCTTGGGAGGCCCGGCCTGAGTGGAGCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GSWKHLWKPSSSAAG*ASVLGRPGLSGAPV
Trigger: GACTGGAGCTCCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAGCTTGGCTTCCACAGGTGCTTCCAGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTCGCCGCCTTCCGGGGTTTCTGTGGCTCATCCTCTCTGGGACCCTaGGTCAGCTCCACTTCCTTCCTCTTCTCGCCTCGGCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LAAFRGFCGSSSLGP*VSSTSFLFSPRPRR
Trigger: CCGGCGGGGCCGAGGCGAGAAGAGGAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCACAGAAACCCCGGAAGGCGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CGCCGTCCTGGCAAAGGCAGGAGCTGCTGGCCGGCGGGGCATCCCTaGCTGAGGGCTTGGGGTGCAGTTCTTCCAGGAAACAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RRPGKGRSCWPAGHP*LRAWGAVLPGNSQP
Trigger: TGGCTGGCTGTTTCCTGGAAGAACTGCACCCCAAGCCCTCAGCCAGGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCCAGGACGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GATTCTCCAACGCGCGTGAGGTCAGCTGCCGAGAACGTGTCCTCGTaGGGCACGGTGGCCTGGCAGGTGCGCCGTTGGGAGGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: DSPTRVRSAAENVSS*GTVAWQVRRWEGGS
Trigger: AGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCTGGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGTaGTGCTGTCCGCCGGAGAGCTGGAAGTCTCGGGAAAACCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGCLGCPGGPGGSCW*CCPPESWKSRENPG
Trigger: CCCTGGGTTTTCCCGAGACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp ATCAGGAGTGGGGCCTTCAGGCCCCTGGACTCCACCCTGGGTGTCTaGGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGTGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IRSGAFRPLDSTLGV*VVREALEAAAGGAV
Trigger: GACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCCACTCCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TTGGCACTGGAGCCAGAGGCATCAGGAGTGGGGCCTTCAGGCCCCTaGACTCCACCCTGGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LALEPEASGVGPSGP*TPPWVSGLSGRPWR
Trigger: CCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGGGCCCAGCGTGGGGTCACCGCCCTCCTCAAAGCTGGGCTGGGTTaGCAGCGGGAGCACCGGCTTCTCACAGCGCTTCCCGTAGACATG +
Preference number: 5 (lower is better)
Translates to: WAQRGVTALLKAGLG*QREHRLLTALPVDM
Trigger: CATGTCTACGGGAAGCGCTGTGAGAAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCGGTGACCCCACGCTGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGGTCACGGGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTaGTGGTGCTGGGAGCCACCTCCGAACACAGGTGGAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: GSRGLQASLGSRAIP*WCWEPPPNTGGAGP
Trigger: CGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCCCGTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TTGCTGGAGAAGAGGCCCGGGGCTGCCTGGGGAAGCCTCGTTCTCTaGCCTCTCCAGGGCTCCGTCCAGCGCGCAGTCTCCTCTGCCATC +
Preference number: 5 (lower is better)
Translates to: LLEKRPGAAWGSLVL*PLQGSVQRAVSSAI
Trigger: GATGGCAGAGGAGACTGCGCGCTGGACGGAGCCCTGGAGAGGCCAGAGAACGAGGCTTCCCCAGGCAGCCCCGGGCCTCTTCTCCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTCCTGTCTTGGTGCCGGGGCGAGGGCTTCCACTGCCCTGGGAGCTaGGGCCGGGTTTGGCTTTGGGGGTGGCGGGCTTCATCCCATTCT +
Preference number: 5 (lower is better)
Translates to: LLSWCRGEGFHCPGS*GRVWLWGWRASSHS
Trigger: AGAATGGGATGAAGCCCGCCACCCCCAAAGCCAAACCCGGCCCCAGCTCCCAGGGCAGTGGAAGCCCTCGCCCCGGCACCAAGACAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTTGACTGAGGCGTGGTaGTCCGTGCCCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWELTEAW*SVPPGL
Trigger: GAGCCCAGGGGGCACGGACAACCACGCCTCAGTCAA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGAGGGCCCCTCCGCACTaGGTTTGCGACACTCCGGAG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWERAPPH*VCDTPE
Trigger: CTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GTCAGGGGCACACCTGCCACGGGCACCCGGGGCCCTGCGTTTCCCTaGGAACACGAGAGGAGCCCTCTTTCCCTCCGCATCTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: VRGTPATGTRGPAFP*EHERSPLSLRILAS
Trigger: AGAGGCCAAGATGCGGAGGGAAAGAGGGCTCCTCTCGTGTTCTCAGGGAAACGCAGGGCCCCGGGTGCCCGTGGCAGGTGTGCCCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGAGCAGGCCACAGAACTGCCGGTGGGCCAGGAAGGCCGCCAGGCTaGTGTAGTTGCGGTCACACTGCCTGCAGGTCAGCAGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: GAGHRTAGGPGRPPG*CSCGHTACRSAARP
Trigger: TGGACGTGCTGCTGACCTGCAGGCAGTGTGACCGCAACTACAGCAGCCTGGCGGCCTTCCTGGCCCACCGGCAGTTCTGTGGCCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CTGGGAAGAGGGATGAGGACTCCAAGGTCGGTGGCGATGCAGCCCTaGCTGGCTCCGTCTCAGCGGTGCCAGGTGGGCTCCTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LGRGMRTPRSVAMQP*LAPSQRCQVGSLAA
Trigger: AGCTGCCAAGGAGCCCACCTGGCACCGCTGAGACGGAGCCAGGCAGGGCTGCATCGCCACCGACCTTGGAGTCCTCATCCCTCTTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp ACCCTCCCGATGTGCAGTGGATTCTCCAACGCGCGTGAGGTCAGCTaGCGAGAACGTGTCCTCGTGGGGCACGGTGGCCTGGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: TLPMCSGFSNAREVS*RERVLVGHGGLAGA
Trigger: CGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACATCGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CAAAGCCAGGCCTCCCTGCCGTGGGGTGGAGGTGCCCACCTGCTCTaGCTGCAGAATGTCCCTGGGCAGCATGGCTGGGACTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: QSQASLPWGGGAHLL*LQNVPGQHGWDWHQ
Trigger: TTGGTGCCAGTCCCAGCCATGCTGCCCAGGGACATTCTGCAGGCAGAGCAGGTGGGCACCTCCACCCCACGGCAGGGAGGCCTGGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CTCCACCCTGGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGGCAGCTaGTGGTGGTGCTGTCCGCCGGAGAGCTGGAAGTCTCGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: LHPGCLGCPGGPGGS*WWCCPPESWKSREN
Trigger: GTTTTCCCGAGACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGGGAAGCTATTCTCAGCAGCGGGAGGCCAGGAGTCGGCCCCACTaGCCTGGTATTCGGGATAGGAACCGGGCTGGAGGGGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LGSYSQQREARSRPH*PGIRDRNRAGGGWC
Trigger: GCACCAGCCCCCTCCAGCCCGGTTCCTATCCCGAATACCAGGCCAGTGGGGCCGACTCCTGGCCTCCCGCTGCTGAGAATAGCTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TCCGTCCCCGCCGGCTTCCTGCCTCGCCGCCTTCCGGGGTTTCTGTaGCTCATCCTCTCTGGGACCCTGGGTCAGCTCCACTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SVPAGFLPRRLPGFL*LILSGTLGQLHFLP
Trigger: AGGAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCACAGAAACCCCGGAAGGCGGCGAGGCAGGAAGCCGGCGGGGACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCTGGGCATCTTGGTAGCACCAGAGCGCCCGGTCTCAGGGGTCCCTaGGTCCTCCGGCTCCTTGCTGCTGGTCCCCATCTCACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PGHLGSTRAPGLRGP*VLRLLAAGPHLTFQ
Trigger: CTGGAAGGTGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACCGGGCGCTCTGGTGCTACCAAGATGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TCGGGCCATCCCTTGGTGGTGCTGGGAGCCACCTCCGAACACAGGTaGAGCAGGGCCGGGAGAGAGCCCTCACTCAGGATGGGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SGHPLVVLGATSEHR*SRAGREPSLRMGLL
Trigger: AAGCAGCCCCATCCTGAGTGAGGGCTCTCTCCCGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTGGTGGTGCTaGGAGCCACCTCCGAACACAGGTGGAGCAGGGCCGGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GLQASLGSRAIPWWC*EPPPNTGGAGPGES
Trigger: GCTCTCTCCCGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TCACGGGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTGGTaGTGCTGGGAGCCACCTCCGAACACAGGTGGAGCAGGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: SRGLQASLGSRAIPW*CWEPPPNTGGAGPG
Trigger: TCCCGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTGGGCTTaGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTCCGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LMVAAWVCSGCWAWA*SGARGWELPASEGS
Trigger: GGACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GTGTGTGGCCCGGCTCTGCCTTCCGCTGCTCTGATGGTGGCGGCCTaGGTTTGTTCTGGCTGTTGGGCTTGGGCTTGGTCGGGAGCACGC +
Preference number: 5 (lower is better)
Translates to: VCGPALPSAALMVAA*VCSGCWAWAWSGAR
Trigger: GCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCCGGGCCACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGTTGCCCCTGTGGTGTTaGGGCGCGGGTTCCGTGATG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWELPLWC*GAGSVM
Trigger: CATCACGGAACCCGCGCCCAAACACCACAGGGGCAA...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GAGGGGTGGGTCGAATCTGTCCACCGGCAGGTCTGGGAAGAGGGATaGGGACTCCAAGGTCGGTGGCGATGCAGCCCTGCCTGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: EGWVESVHRQVWEEG*GLQGRWRCSPAWLR
Trigger: ACGGAGCCAGGCAGGGCTGCATCGCCACCGACCTTGGAGTCCTCATCCCTCTTCCCAGACCTGCCGGTGGACAGATTCGACCCACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CCGATTCCGCACCCTCCCGATGTGCAGTGGATTCTCCAACGCGCGTaGGGTCAGCTGCCGAGAACGTGTCCTCGTGGGGCACGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PIPHPPDVQWILQRA*GQLPRTCPRGARWP
Trigger: AGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACATCGGGAGGGTGCGGAATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGTCTCCTCCAGGCACTGGAAGGCACCCTCGGCTCCCAGCCCATCTaGGGGAAAAGGGAAGGCCTTGGCTGGCTCTGGCTGGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GLLQALEGTLGSQPI*GKREGLGWLWLVVG
Trigger: ACCCACTACCAGCCAGAGCCAGCCAAGGCCTTCCCTTTTCCCGCAGATGGGCTGGGAGCCGAGGGTGCCTTCCAGTGCCTGGAGGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CACAGAACTGCCGGTGGGCCAGGAAGGCCGCCAGGCTGCTGTAGTTaGGGTCACACTGCCTGCAGGTCAGCAGCACGTCCAGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: HRTAGGPGRPPGCCS*GHTACRSAARPAGP
Trigger: TGGACCAGCTGGACGTGCTGCTGACCTGCAGGCAGTGTGACCGCAACTACAGCAGCCTGGCGGCCTTCCTGGCCCACCGGCAGTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGGGCTCGGCCTCCTCCTGAAGGCTCATGGCTGCCCTGCTTCCCTTaGATTTCTCTAGCAGGACTGCACCCTCGGTGGGGCCGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: WARPPPEGSWLPCFP*ISLAGLHPRWGRSA
Trigger: CGCTGACCGGCCCCACCGAGGGTGCAGTCCTGCTAGAGAAATGCAAGGGAAGCAGGGCAGCCATGAGCCTTCAGGAGGAGGCCGAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCTGGAAATGGTCAGGGGCACACCTGCCACGGGCACCCGGGGCCCTaGGTTTCCCTGAGAACACGAGAGGAGCCCTCTTTCCCTCCGCAT +
Preference number: 5 (lower is better)
Translates to: PGNGQGHTCHGHPGP*VSLRTREEPSFPPH
Trigger: ATGCGGAGGGAAAGAGGGCTCCTCTCGTGTTCTCAGGGAAACGCAGGGCCCCGGGTGCCCGTGGCAGGTGTGCCCCTGACCATTTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTCCTCCGGCCACGCTCCCTGGGGCTGATGGAAGGCAAACACCAGTaGCCCATTGGTGAATGCGTGCCCAGCCACATCCGCAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LLRPRSLGLMEGKHQ*PIGECVPSHIRREG
Trigger: CCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAGCCCCAGGGAGCGTGGCCGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GTAGGTGAACAGTGCTGGGGAGCCGCCCTGGCTGCTTCTCACGGCTaGCAGCTTCTCTCTGGGTCCCGGTGTCTTGCCAGCAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VGEQCWGAALAASHG*QLLSGSRCLASSAQ
Trigger: CTGGGCACTGCTGGCAAGACACCGGGACCCAGAGAGAAGCTGCCAGCCGTGAGAAGCAGCCAGGGCGGCTCCCCAGCACTGTTCACCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGGGCAGGAAGCCTGTCCTCAGGGGGTCGTCTTTGCCCTCGGCCTaGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTGGCTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LGRKPVLRGSSLPSA*ASPANRKVFAWLSK
Trigger: CTTGCTCAGCCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGAGGACAGGCTTCCTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCGCCGGTGCAAACTCATTACCCTCAAAGCCAGGCCTCCCTGCCGTaGGGTGGAGGTGCCCACCTGCTCTGCCTGCAGAATGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PPVQTHYPQSQASLP*GGGAHLLCLQNVPG
Trigger: CCCAGGGACATTCTGCAGGCAGAGCAGGTGGGCACCTCCACCCCACGGCAGGGAGGCCTGGCTTTGAGGGTAATGAGTTTGCACCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGGACGCCCTCTCTGGAGTCCGGCCCTCAGATCCACTTCGGCTGTaGGCTGCTGTCAAGGCCAGCGCCAGGGACTCCCTATTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: LDALSGVRPSDPLRL*AAVKASARDSLLGD
Trigger: GTCCCCTAATAGGGAGTCCCTGGCGCTGGCCTTGACAGCAGCCCACAGCCGAAGTGGATCTGAGGGCCGGACTCCAGAGAGGGCGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CGTTTCCCTGAGAACACGAGAGGAGCCCTCTTTCCCTCCGCATCTTaGCCTCTGGCTCCCGGCCGCGGCAGAGATGCCCCCAGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RFPENTRGALFPSAS*PLAPGRGRDAPRGR
Trigger: TCTCCCTCTGGGGGCATCTCTGCCGCGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAAGAGGGCTCCTCTCGTGTTCTCAGGGAAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCTGCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTaGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: AALMVAAWVCSGCWA*AWSGARGWELPASE
Trigger: CTCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CCTTCCGCTGCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTaGGCTTGGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PSAALMVAAWVCSGC*AWAWSGARGWELPA
Trigger: AGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTGTGGGCCAGGCTGCTaGCTGGGCTCAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWACGPGC*LGSGRQ
Trigger: CTGCCTGCCTGAGCCCAGCAAGCAGCCTGGCCCACA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGCGGCCCCGTCTGGGTaGCTGGGGGTGCTGCGTGCC +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSAAPSG*LGVLRA
Trigger: GGCACGCAGCACCCCCAGCAACCCAGACGGGGCCGC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGCACAGACCTCAGGCTaGCAGCCCGGCAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPAQTSG*QPGRGG
Trigger: GCCTCCCCTGCCGGGCTGCAAGCCTGAGGTCTGTGC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp ACGGCGGGGGACACTCCTGGTGGTTGGATGGCAGCTCACAACCTCTaGTCGGGTGGGTCACGGGGTCTACAGGCCTCTCTAGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: TAGDTPGGWMAAHNL*SGGSRGLQASLGSR
Trigger: CCGAGACCCTAGAGAGGCCTGTAGACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCCCCCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp ATGTCTGCTGGGCGGCGGCTGCTCTGGTATCAGGAGACCGGGGCTTaGTCCCATTTCTCCCGCACAGGCGGCTGGAGGAGAACGCAAAGC +
Preference number: 5 (lower is better)
Translates to: MSAGRRLLWYQETGA*SHFSRTGGWRRTQS
Trigger: GCTTTGCGTTCTCCTCCAGCCGCCTGTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGGCACATGCGAACGGCAGACCGGAGTCCCTGTTCGCAGACAGGCTaGCATAGAGGGGTGGGTCGAATCTGTCCACCGGCAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: RHMRTADRSPCSQTG*HRGVGRICPPAGLG
Trigger: TCCCAGACCTGCCGGTGGACAGATTCGACCCACCCCTCTATGGCAGCCTGTCTGCGAACAGGGACTCCGGTCTGCCGTTCGCATGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCTGGGCAGCCTCCAGCTGTGGGTTCTCTGGTGTCTCGTCCAGGGTaGGCTTGGTCCTCGAGCTGGCGATGCCCAGAATGTAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: AGQPPAVGSLVSRPG*AWSSSWRCPECSAV
Trigger: CACAGCGCTACATTCTGGGCATCGCCAGCTCGAGGACCAAGCCCACCCTGGACGAGACACCAGAGAACCCACAGCTGGAGGCTGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTTCCTGCCTCGCCGCCTTCCGGGGTTTCTGTGGCTCATCCTCTCTaGGACCCTGGGTCAGCTCCACTTCCTTCCTCTTCTCGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LPASPPSGVSVAHPL*DPGSAPLPSSSRLG
Trigger: GCCGAGGCGAGAAGAGGAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCACAGAAACCCCGGAAGGCGGCGAGGCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCACCCTGTAGCGTGGGAGGCTCAGTGGGCACAGCTGTGACAGCCTaGCCCTCCCTGTGGCCGAGGCGGGCAGTATTGCTTGGAGAATAC +
Preference number: 5 (lower is better)
Translates to: APCSVGGSVGTAVTA*PSLWPRRAVLLGEY
Trigger: GTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGCTGTCACAGCTGTGCCCACTGAGCCTCCCACGCTACAGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGGTGTTCCCGGGAAGCCCACCGTCACAGCGTTCTCTCTCCAGGCTaGGGGGCTCGGGGCTCACATCTCCGAGAGAAGAGGAGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: GCSREAHRHSVLSPG*GARGSHLREKRRSH
Trigger: ATGACTCCTCCTCTTCTCTCGGAGATGTGAGCCCCGAGCCCCCCAGCCTGGAGAGAGAACGCTGTGACGGTGGGCTTCCCGGGAACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TTGGTGCTGAGCACCTCAAAGTCCGTGGCACGGAGCGGCAGCAGGTaGGTGTTCCCGGGAAGCCCACCGTCACAGCGTTCTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVLSTSKSVARSGSR*VFPGSPPSQRSLSR
Trigger: CCTGGAGAGAGAACGCTGTGACGGTGGGCTTCCCGGGAACACCCACCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGCTCAGCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp AAGCCAGTTAGTCTCTGCCCGAAGAGCTGGCTGAGGAGGTCACTCTaGGCCTCGGCCGTCCGGTGGGTGTGTGGCTCGGCAGGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: KPVSLCPKSWLRRSL*ASAVRWVCGSAGSA
Trigger: TGCTGAACCTGCCGAGCCACACACCCACCGGACGGCCGAGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAGACTAACTGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTCCGGGCCTGCTGCCTTaGGGAATAGGTTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAPGLLP*GIGSGS
Trigger: CGAGCCGGAACCTATTCCCAAAGGCAGCAGGCCCGG...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTCAGGGGGTCGTCTTaGCCCTCGGCCTGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLRGSS*PSAWAS
Trigger: GGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGCTGTCGATCTCCGGGTaGTCCGACTGGTACTCCATG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWELSISG*SDWYSM
Trigger: CATGGAGTACCAGTCGGACAACCCGGAGATCGACAG...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGACAGAACACTGGGTTaGGGGCAGGCGGTACTTGAG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWEDRTLG*GQAVLE
Trigger: CTCAAGTACCGCCTGCCCCAAACCCAGTGTTCTGTC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCGGTGCTTCCTGGCCTaGTGCCGGCTCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWRCFLA*CRLRPG
Trigger: GCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTCGCGGGAGGGGTCCTaGCAGGCCTCGTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSSREGS*QASCTG
Trigger: CCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCGA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCCAGGCGAAGGACTTCTaGATGATGCGCATAACCGTG +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTQAKDF*MMRITV
Trigger: CACGGTTATGCGCATCATCAAGAAGTCCTTCGCCTG...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTTGGTGGCGCTGCCCTaGTGGAAGGCGCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLVALP*WKAPRG
Trigger: GCCCCGAGGCGCCTTCCACAAGGGCAGCGCCACCAA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp TGGGACCTCTGGGGCCGGAAGGCTCCTCGTCCGCGAAGACGTCGATaGAGCTGCTGTCGATCTCCGGGTTGTCCGACTGGTACTCCATGC +
Preference number: 5 (lower is better)
Translates to: WDLWGRKAPRPRRRR*SCCRSPGCPTGTPC
Trigger: GCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGACGTCTTCGCGGACGAGGAGCCTTCCGGCCCCAGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CTCTGTGCCTGTGCCGAGCTCCACCCTGCCCACCGACTCAGCTTCTaGAAGCTCTCTCGGGGCCCCACGTGTGTCTTTGCTCCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LCACAELHPAHRLSF*KLSRGPTCVFAPLQ
Trigger: CTGCAAAGGAGCAAAGACACACGTGGGGCCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp AACCGCTTCCACGGTGGCCACAGCCGATTCCGCACCCTCCCGATGTaGAGTGGATTCTCCAACGCGCGTGAGGTCAGCTGCCGAGAACGT +
Preference number: 5 (lower is better)
Translates to: NRFHGGHSRFRTLPM*SGFSNAREVSCRER
Trigger: ACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACATCGGGAGGGTGCGGAATCGGCTGTGGCCACCGTGGAAGCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CGGGGAATCCTCAGCCCCAGTATCTGTCGTGGCTTGGACGCCATCTaGCTCTTCCAGAGGTGCCCAGGCAGGAGAACAGGCCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RGILSPSICRGLDAI*LFQRCPGRRTGQQL
Trigger: CAGCTGCTGGCCTGTTCTCCTGCCTGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCCACGACAGATACTGGGGCTGAGGATTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCTTGCCGAGGCTCCCTTCTGCCCAGTTGGCTGTTCCCCCAGAGCTaGACCATCCATCCTCCCTGGACACAGCATCCGATCTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PCRGSLLPSWLFPQS*TIHPPWTQHPISRW
Trigger: CCACCTGGAGATCGGATGCTGTGTCCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAGCCAACTGGGCAGAAGGGAGCCTCGGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCGTGTTCTCCTCCCAGACACCTTCCTCTGATCGGCTGTGGGCCCTaGTGCTGTCCTCCGCAGGCTCGCTCCCAGACTCTTTGCACACAC +
Preference number: 5 (lower is better)
Translates to: ACSPPRHLPLIGCGP*CCPPQARSQTLCTH
Trigger: GTGTGTGCAAAGAGTCTGGGAGCGAGCCTGCGGAGGACAGCAGCAGGGCCCACAGCCGATCAGAGGAAGGTGTCTGGGAGGAGAACACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp CCTGCTATTGAGGAACCCATCCAGGAGGAAGGACTCGGGCAGACCTaGGGGATCCTCGTCCTCCCACGGGTCCTCATGGCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PAIEEPIQEEGLGQT*GILVLPRVLMAEAE
Trigger: CTCTGCCTCTGCCATGAGGACCCGTGGGAGGACGAGGATCCCGCAGGTCTGCCCGAGTCCTTCCTCCTGGATGGGTTCCTCAATAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTGCCCAGTTGGCTGTTCCCCCAGAGCTGCACCATCCATCCTCCCTaGACACAGCATCCGATCTCCAGGTGGCTTCTGGGCCCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LPSWLFPQSCTIHPP*TQHPISRWLLGPSL
Trigger: GAGACTGGGGCCCAGAAGCCACCTGGAGATCGGATGCTGTGTCCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAGCCAACTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGACACTCCTGGTGGTTGGATGGCAGCTCACAACCTCTGATCGGGTaGGTCACGGGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: GHSWWLDGSSQPLIG*VTGSTGLSRVSGHP
Trigger: GGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTCTTCGGCGGCGGGTaGGGCCTCAGTCCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLFGGG*GLSPWE
Trigger: CTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCCAGGGAACGCGTTTaGGGCCTGCCTCGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPRERV*GLPRAG
Trigger: CCCAGCCCGAGGCAGGCCCAAAACGCGTTCCCTGGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGAGTATCTGTCGTGGCTaGGACGCCATCTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWESICRG*DAICLF
Trigger: GAAGAGGCAGATGGCGTCCAAGCCACGACAGATACT...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTAGGCCCATGTGGAGCTaGGCCCTTCCACTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWARPMWS*ALPLAV
Trigger: AACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCGGTGCTTCCTGGCCTaGTGCCGGCTCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSERCFLA*CRLRPG
Trigger: GCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCCCAGGGCCCGGCCTaGCTCTGCGCGTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAQGPA*LCACLS
Trigger: GGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTGCAGCTTGAAGGGCTaGGGGAAGCGCTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWACSLKG*GKRFPQ
Trigger: CTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCTGCA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTGGCAGCCCGCAGGCTaGGTGGCGCTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSWQPAG*VALPLW
Trigger: CCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCCA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCCCTGGGGGAAGGCCTaGCCCAGTCTGTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPPWGKA*PSLSFL
Trigger: GAGGAAGGACAGACTGGGCAAGGCCTTCCCCCAGGG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCCGCCATGCAGGTGCCCGTGCCCTCGACAAGCCATGGTGGGGCCTCCCTGACCTGGGGGAACGGGAGGTaGTGCAAATCTCCAAACATT +
Preference number: 5 (lower is better)
Translates to: AAMQVPVPSTSHGGASLTWGNGR*CKSPNI
Trigger: AATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCA...GGTCAGGGAGGCCCCACCATGGCTTGTCGAGGGCACGGGCACCTGCATGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp TCTGTCCTTCCTCTGTGTGTGGCCCGGCTCTGCCTTCCGCTGCTCTaGTGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SVLPLCVARLCLPLL*WWRPGFVLAVGLGL
Trigger: AAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCCGGGCCACACACAGAGGAAGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TCCCTGGGGCTGATGGAAGGCAAACACCAGTGGCCCATTGGTGAATaGGTGCCCAGCCACATCCGCAGGGAAGGGTTTTGTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: SLGLMEGKHQWPIGE*VPSHIRREGFCAGP
Trigger: GGGGCCAGCACAAAACCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAGCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GCCGGAGTCTTCACATCTACCTCATGCTCAGTAGGGCTTGGAGGGTaGAGCTGCTGGCTGTGTGGGGACCCCGGTGCTCTGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: AGVFTSTSCSVGLGG*SCWLCGDPGALRTS
Trigger: GGAGGTTCTCAGAGCACCGGGGTCCCCACACAGCCAGCAGCTGCACCCTCCAAGCCCTACTGAGCATGAGGTAGATGTGAAGACTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp TGTTCTCCTCCCAGACACCTTCCTCTGATCGGCTGTGGGCCCTGCTaGTGTCCTCCGCAGGCTCGCTCCCAGACTCTTTGCACACACCCA +
Preference number: 5 (lower is better)
Translates to: CSPPRHLPLIGCGPC*CPPQARSQTLCTHP
Trigger: TGGGTGTGTGCAAAGAGTCTGGGAGCGAGCCTGCGGAGGACAGCAGCAGGGCCCACAGCCGATCAGAGGAAGGTGTCTGGGAGGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GGAGCGGAAGGAGGCTGCGCAGACCTCACAGGTCACAGGCCCATGTaGAGCTTGGCCCTTCCACTGGCCGTTCTCTGTAGATGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GAEGGCADLTGHRPM*SLALPLAVLCRCRL
Trigger: AAGCCTGCATCTACAGAGAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACCTGTGAGGTCTGCGCAGCCTCCTTCCGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCCCTCCTTCCACAGAGAGGCAGTGGCTCGGAGAGGCTGCGTAACTaGCCATTGCAGGGGATGGTCTGGAGCCGCGCCCATCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: ALLPQRGSGSERLRN*PLQGMVWSRAHLKS
Trigger: TGATTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACTGCCTCTCTGTGGAAGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTCGCTCCCAGACTCTTTGCACACACCCAACGCCTTGGTCTCTCTTaGTCCCCAGAACCCCCTTGCCGAGGCTCCCTTCTGCCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LAPRLFAHTQRLGLS*SPEPPCRGSLLPSW
Trigger: CCAACTGGGCAGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp ACAAGCTTGGAGGATCCTTGGCACTGGAGCCAGAGGCATCAGGAGTaGGGCCTTCAGGCCCCTGGACTCCACCCTGGGTGTCTGGGTTGT +
Preference number: 5 (lower is better)
Translates to: TSLEDPWHWSQRHQE*GLQAPGLHPGCLGC
Trigger: ACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGCCTCCCTGGCACCCTaGGTGGTCCTGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWASLAP*VVLVAG
Trigger: CCCAGCTACCAGGACCACCAAGGGTGCCAGGGAGGC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCTCAGGGATGGGGGCTaGAGCTCCCCGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSELRDGG*SSPSLA
Trigger: GGCCAGGGACGGGGAGCTCAAGCCCCCATCCCTGAG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGAGTCACCCCCGCCTaGCTCTTAAGGGGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGVTPA*LLRGCP
Trigger: CGGACACCCCCTTAAGAGCAAGGCGGGGGTGACTCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTCTGAGGTCTCGGTGTaGGTGGGGACCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPSEVSV*VGTCRG
Trigger: TCCCCTGCAGGTCCCCACCAACACCGAGACCTCAGA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTAGGCTTCCCGACGGCTaGGGGGTGCCGGTGTCATGT +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRLPDG*GVPVSC
Trigger: ACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTGGTTGGCTGTGCCTaGGCCCTGGGTTTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLVGCA*ALGFLG
Trigger: GCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCAGCCAGGGCTTCCTaGGGATCGCAGGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPARAS*GSQGLV
Trigger: AACAAGCCCCTGCGATCCCAAGGAAGCCCTGGCTGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGGGTCCTCCGGCTCCTaGCTGCTGGTCCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRGSSGS*LLVPIS
Trigger: TGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCAAAGCTGGGCTGGGTaGGCAGCGGGAGCACCGGCT +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSQSWAG*AAGAPA
Trigger: AGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTTGCCGGCGGAGCGCTaGCCCCTGTGGTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLPAER*PLWCLG
Trigger: GCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTTGCAGCTTGAAGGGCTaGGGGAAGCGCTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPCSLKG*GKRFPQ
Trigger: CTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCTGCA...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGGCCGGGTTTGGCTTaGGGGGTGGCGGGCTTCATC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGPGLA*GVAGFI
Trigger: GATGAAGCCCGCCACCCCCAAAGCCAAACCCGGCCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGAGCTGGGGCCGGGTTaGGCTTTGGGGGTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHELGPG*ALGVAG
Trigger: GCCCGCCACCCCCAAAGCCAAACCCGGCCCCAGCTC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGAGCTGGGGCCGGGTTaGGCTTTGGGGGTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLELGPG*ALGVAG
Trigger: GCCCGCCACCCCCAAAGCCAAACCCGGCCCCAGCTC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTGCTCACCAGCTTCCCTaGGCCCCTTGGTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGAHQLP*APWCSS
Trigger: AGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAGC...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTAGGCCTGTTGTGCTCTaGGGGGACCAGGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRRPVVL*GDQAAQ
Trigger: CTGAGCCGCCTGGTCCCCCAAGAGCACAACAGGCCT...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp ACGCTCCCTGGGGCTGATGGAAGGCAAACACCAGTGGCCCATTGGTaGATGCGTGCCCAGCCACATCCGCAGGGAAGGGTTTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TLPGADGRQTPVAHW*MRAQPHPQGRVLCW
Trigger: CCAGCACAAAACCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAGCCCCAGGGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp GTCAGGCTCTTGTGTAAACTGTCAGAGAAGGGTCTCGGGGCCGAGTaGGCAGCTCCAGGGGAAGAGAGGGCACCACTGAGGTCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VRLLCKLSEKGLGAE*AAPGEERAPLRSLW
Trigger: CCACAGCGACCTCAGTGGTGCCCTCTCTTCCCCTGGAGCTGCTCACTCGGCCCCGAGACCCTTCTCTGACAGTTTACACAAGAGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GAGGGGTTCACTCGTGGAGGGCTCTGGGCAGCAGGTGTCAGCTCCTaGAAGCCCAGGATGCCATCTTTACTCTTAGCCACTCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: EGFTRGGLWAAGVSS*KPRMPSLLLATPGP
Trigger: AGGGCCTGGAGTGGCTAAGAGTAAAGATGGCATCCTGGGCTTGCAGGAGCTGACACCTGCTGCCCAGAGCCCTCCACGAGTGAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TATCAGGAGACCGGGGCTTGCTCCCATTTCTCCCGCACAGGCGGCTaGAGGAGAACGCAAAGCCTCTGTGAATTCTGTGCTGTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: YQETGACSHFSRTGG*RRTQSLCEFCAVRG
Trigger: GCCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTTCTCCTCCAGCCGCCTGTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp AATGTCCCTGGGCAGCATGGCTGGGACTGGCACCAAAAGGCCAGGTaGCATCCAGAGGTGGAGCCCCGTCACCCTGAAATGCCAAGTCAG +
Preference number: 5 (lower is better)
Translates to: NVPGQHGWDWHQKAR*HPEVEPRHPEMPSQ
Trigger: CTGACTTGGCATTTCAGGGTGACGGGGCTCCACCTCTGGATGCCACCTGGCCTTTTGGTGCCAGTCCCAGCCATGCTGCCCAGGGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp ACAGTGCCCCCTTCCAGACCTGAGGGGTTCACTCGTGGAGGGCTCTaGGCAGCAGGTGTCAGCTCCTGCAAGCCCAGGATGCCATCTTTA +
Preference number: 5 (lower is better)
Translates to: TVPPSRPEGFTRGGL*AAGVSSCKPRMPSL
Trigger: TAAAGATGGCATCCTGGGCTTGCAGGAGCTGACACCTGCTGCCCAGAGCCCTCCACGAGTGAACCCCTCAGGTCTGGAAGGGGGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCCGGGCCTGCTGCCTTaGGGAATAGGTTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSPGLLP*GIGSGS
Trigger: CGAGCCGGAACCTATTCCCAAAGGCAGCAGGCCCGG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCCGCAGGGAAGGGTTTaGTGCTGGCCCCATGCAGTG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRPQGRV*CWPHAV
Trigger: CACTGCATGGGGCCAGCACAAAACCCTTCCCTGCGG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGAGCGGGGGCGGAGCTTaGCTCTCTGGAGTCACCCCC +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSESGGGA*LSGVTP
Trigger: GGGGGTGACTCCAGAGAGCAAAGCTCCGCCCCCGCT...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTTCAGAATGAGCTCCTaGCCCCAGGCGCCGCCCCGA +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSFRMSS*PQAPPR
Trigger: TCGGGGCGGCGCCTGGGGCAAGGAGCTCATTCTGAA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACCGTGGGGCGCCGTGTaGGCGAGGCTTCCCGACGGC +
Preference number: 5 (lower is better)
Translates to: QLTSLLHVGEREVVQISKPWGAV*ARLPDG
Trigger: GCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTTGACTGAGGCGTGGTaGTCCGTGCCCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLTEAW*SVPPGL
Trigger: GAGCCCAGGGGGCACGGACAACCACGCCTCAGTCAA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTGGGATCGCAGGGGCTaGTTGTCAAAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGWDRRG*LSKTGE
Trigger: CTCCCCCGTCTTTGACAACAAGCCCCTGCGATCCCA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCGGGTCCTCCGGCTCCTaGCTGCTGGTCCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSGSSGS*LLVPIS
Trigger: TGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCC...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCACACACCCAACGCCTaGGTCTCTCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGHTPNA*VSLGPQ
Trigger: CTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTAAGCTTGGAGGATCCTaGGCACTGGAGCCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWAKLGGS*ALEPEA
Trigger: TGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTT...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCAAAGCTGGGCTGGGTaGGCAGCGGGAGCACCGGCT +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSEQSWAG*AAGAPA
Trigger: AGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCCAGGCACCCTGCTATaGAGGAACCCATCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPPGTLL*RNPSRR
Trigger: CCTCCTGGATGGGTTCCTCAATAGCAGGGTGCCTGG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTTGCCCCTGTGGTGTTaGGGCGCGGGTTCCGTGATG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLPLWC*GAGSVM
Trigger: CATCACGGAACCCGCGCCCAAACACCACAGGGGCAA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTGCCGACCTGTCCTTaGATGAGCTCTGGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLPTCP*MSSGSP
Trigger: CGGGCTGCCAGAGCTCATCAAAGGACAGGTCGGCAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCCTGGGGGAAGGCCTaGCCCAGTCTGTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPWGKA*PSLSFL
Trigger: GAGGAAGGACAGACTGGGCAAGGCCTTCCCCCAGGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCACAGACCTCAGGCTaGCAGCCCGGCAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAQTSG*QPGRGG
Trigger: GCCTCCCCTGCCGGGCTGCAAGCCTGAGGTCTGTGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp GCGAAGACGTCGATGAAGCTGCTGTCGATCTCCGGGTTGTCCGACTaGTACTCCATGCCGTTGAGCGCCTCTGTGATGAGGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AKTSMKLLSISGLSD*YSMPLSASVMRLSS
Trigger: GCTGGACAGCCTCATCACAGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGACGTCTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp ACTCATAAGAGCAACGCTACATCCACTCCCCTTCCCAGGCAAAGATaGGGCGGCGCCGGGAACCACTGTCCGTTCAGGGGGACACGTCTT +
Preference number: 5 (lower is better)
Translates to: THKSNATSTPLPRQR*GGAGNHCPFRGTRL
Trigger: AAGACGTGTCCCCCTGAACGGACAGTGGTTCCCGGCGCCGCCCCATCTTTGCCTGGGAAGGGGAGTGGATGTAGCGTTGCTCTTATGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCCTCCCTGGCACCCTaGGTGGTCCTGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLASLAP*VVLVAG
Trigger: CCCAGCTACCAGGACCACCAAGGGTGCCAGGGAGGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCTGCCCGCCAGCCTaGAGGGAGCCTGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPCPPA*REPARG
Trigger: GCCCCTTGCAGGCTCCCTCAAGGCTGGCGGGCAGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGTCGTCCAGGGTGGGCTaGGTCCTCGAGCTGGCGATG +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSESSRVG*VLELAM
Trigger: CATCGCCAGCTCGAGGACCAAGCCCACCCTGGACGA...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCCATTCCGTGGGGACTaGGCCGGGCGGTCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWPFRGD*AGRSGA
Trigger: TGCTCCCGACCGCCCGGCCAAGTCCCCACGGAATGG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTCAGGGGGTCGTCTTaGCCCTCGGCCTGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLRGSS*PSAWAS
Trigger: GGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTATGAGGCTGTCCAGCTaGGCGTCATCCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGMRLSS*ASSSMS
Trigger: GGACATGGAGGATGACGCCAAGCTGGACAGCCTCAT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGGCGATCAGCACACTaGGGGCCTCCCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGRSAH*GPPSLA
Trigger: CGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGCAGTTTCAGGCTCCTaGGCCTCCTGGGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRAVSGS*ASWGKS
Trigger: GGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTGC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCACTGCAGGGAGAGTaGTCACCTGCACACCCCCTG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPLQGE*SPAHPL
Trigger: CAGGGGGTGTGCAGGTGACAACTCTCCCTGCAGTGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCCGAGGCGGGCAGTATaGCTTGGAGAATACGAGGAG +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGPRRAV*LGEYEE
Trigger: CTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCCACGGGACCTCTGTTaGAGGTCTTGGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSEPRDLC*RSWGPR
Trigger: CCTCGGCCCCCAAGACCTCAAACAGAGGTCCCGTGG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCTGCGTAACTGGCCATaGCAGGGGATGGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRLRNWP*QGMVWS
Trigger: GCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTAAGCTTGGAGGATCCTaGGCACTGGAGCCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGKLGGS*ALEPEA
Trigger: TGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTT...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTCCAGGCACCCTGCTATaGAGGAACCCATCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRPGTLL*RNPSRR
Trigger: CCTCCTGGATGGGTTCCTCAATAGCAGGGTGCCTGG...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGCCCAGGGCCCGGCCTaGCTCTGCGCGTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFAQGPA*LCACLS
Trigger: GGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTGGCTTCTCCCTCTaGCCCCCACGGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLGFSL*PPRVSR
Trigger: CCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGTCGCGGGAGGGGTCCTaGCAGGCCTCGTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQSREGS*QASCTG
Trigger: CCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCGA...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCCCCAGAGGGAGAGCTaGCTGGAGAAGAGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSPQRES*LEKRPG
Trigger: CCCGGGCCTCTTCTCCAGCAAGCTCTCCCTCTGGGG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTGCCACCTCCTGTCTaGGTGCCGGGGCGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLPPPV*VPGRGL
Trigger: AAGCCCTCGCCCCGGCACCAAGACAGGAGGTGGCAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTGCAGCTCTTGGCTaGGGCTCGAGCGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGAALG*GSSGEP
Trigger: AGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCACGCGGCTGGGAGTaGCCTGCTTCCGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPARGWE*PASEGS
Trigger: GGACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACAGGGCGCAGGGGTGTGGGCTTCCGGTCCCAGGCTCTaGCTCCTAGAAATTACTCGG +
Preference number: 5 (lower is better)
Translates to: SKHWLLWCRCPQGAGVWASGPRL*LLEITR
Trigger: CCGAGTAATTTCTAGGAGCAAGAGCCTGGGACCGGA...AGCCCACACCCCTGCGCCCTGTGGGCACCGACACCACAGAAGCCAATGTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCGTCCCAGGCCTGGGTaGGGTCGGTGCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLRPRPG*GRCMRV
Trigger: CACCCTCATGCACCGACCCAACCCAGGCCTGGGACG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCCCTCCGCACTTGGTTaGCGACACTCCGGAGGCGTT +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWPSALG*RHSGGV
Trigger: AACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CCATTTCTCCCGCACAGGCGGCTGGAGGAGAACGCAAAGCCTCTGTaGATTCTGTGCTGTCCGGGGCTGACTCTTCGGCAGTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PFLPHRRLEENAKPL*ILCCPGLTLRQFQA
Trigger: AGCCTGAAACTGCCGAAGAGTCAGCCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTTCTCCTCCAGCCGCCTGTGCGGGAGAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTGGTAGCTGGGGTGTaGTCCTCCAGTGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLVAGV*SSSGGW
Trigger: CCAGCCGCCACTGGAGGACAACACCCCAGCTACCAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGAGTCACCCCCGCCTaGCTCTTAAGGGGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGVTPA*LLRGCP
Trigger: CGGACACCCCCTTAAGAGCAAGGCGGGGGTGACTCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCAGCGGGGGCGGAGCTTaGCTCTCTGGAGTCACCCCC +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPSGGGA*LSGVTP
Trigger: GGGGGTGACTCCAGAGAGCAAAGCTCCGCCCCCGCT...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCAGGGAACGCGTTTaGGGCCTGCCTCGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPRERV*GLPRAG
Trigger: CCCAGCCCGAGGCAGGCCCAAAACGCGTTCCCTGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGGCGATCAGCACACTaGGGGCCTCCCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGRSAH*GPPSLA
Trigger: CGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATGCCCACACCTGGCGTaGGCGAGCTTCCGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVCPHLA*ASFRGA
Trigger: CGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTGTTTTGGGACTGGCATaGACTGAGGCGTGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPVLGLA*TEAWLS
Trigger: GGACAACCACGCCTCAGTCAATGCCAGTCCCAAAAC...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGTGGCCAGCAGTGGCTaGTTCAGGCCGGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPVASSG*FRPGLD
Trigger: GTCCAGCCCCGGCCTGAACAAGCCACTGCTGGCCAC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTAGTATCTGTCGTGGCTaGGACGCCATCTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPSICRG*DAICLF
Trigger: GAAGAGGCAGATGGCGTCCAAGCCACGACAGATACT...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTCACGCAGGTGCTCGTaGTACATCCAGACGTCGGCC +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWSRRCS*YIQTSA
Trigger: GGCCGACGTCTGGATGTACAACGAGCACCTGCGTGA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTTGCCGGCGGAGCGCTaGCCCCTGTGGTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLPAER*PLWCLG
Trigger: GCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCCTTGGCTTCTCCCTCTaGCCCCCACGGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPLGFSL*PPRVSR
Trigger: CCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAG...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAGCCACCCTGCGCCGTTaGCTGGGCAGTGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: QLTSLLHVGEREVVQISKATLRR*LGSVPS
Trigger: CGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGC...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGCCACCCTGCGCCGTTaGCTGGGCAGTGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCATLRR*LGSVPS
Trigger: CGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTTGGTGGCGCTGCCCTaGTGGAAGGCGCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCLVALP*WKAPRG
Trigger: GCCCCGAGGCGCCTTCCACAAGGGCAGCGCCACCAA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGGTGCACTGGGAACTaGAGTGCTTTGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGCTGN*SALLGV
Trigger: CACCCCCAGCAAAGCACTCAAGTTCCCAGTGCACCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCACGCGGCTGGGAGTaGCCTGCTTCCGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQARGWE*PASEGS
Trigger: GGACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCCAGAGCTCCGTACAGCAGGGAGGCTCTAGAGGGCGGCCATGGAGGCTGGGAGGTTTCTAAGGTCACTTaGGAATTCCAGCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: PRAPYSREALEGGHGGWEVSKVT*EFQQQQ
Trigger: CTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAAC...CTCCCAGCCTCCATGGCCGCCCTCTAGAGCCTCCCTGCTGTACGGAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp TGGAGGAGAACGCAAAGCCTCTGTGAATTCTGTGCTGTCCGGGGCTaGCTCTTCGGCAGTTTCAGGCTCCTTGGCCTCCTGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: WRRTQSLCEFCAVRG*LFGSFRLLGLLGKV
Trigger: GACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTGCCGAAGAGTCAGCCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTTCTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CAAAGGGTCCCAGAAAGCACAGGTCTTGCATCTCAAACTTGGTGCTaGGCACCTCAAAGTCCGTGGCACGGAGCGGCAGCAGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: QRVPESTGLASQTWC*APQSPWHGAAAGGC
Trigger: ACACCCACCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTGGGACCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 90 bp GGGAGACCCACGGGGTCTTCAAAGGGTCCCAGAAAGCACAGGTCTTaGATCTCAAACTTGGTGCTGAGCACCTCAAAGTCCGTGGCACGG +
Preference number: 5 (lower is better)
Translates to: GRPTGSSKGPRKHRS*ISNLVLSTSKSVAR
Trigger: CCGTGCCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTGGGACCCTTTGAAGACCCCGTGGGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp AGTGGCTCGGAGAGGCTGCGTAACTGGCCATTGCAGGGGATGGTCTaGAGCCGCGCCCATCTGAAATCACATCAGCAGAGACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SGSERLRNWPLQGMV*SRAHLKSHQQRLEE
Trigger: TTCTTCCAGTCTCTGCTGATGTGATTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTGGTAGCTGGGGTGTaGTCCTCCAGTGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLVAGV*SSSGGW
Trigger: CCAGCCGCCACTGGAGGACAACACCCCAGCTACCAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCGTCCAGGGTGGGCTaGGTCCTCGAGCTGGCGATG +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSSRVG*VLELAM
Trigger: CATCGCCAGCTCGAGGACCAAGCCCACCCTGGACGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCTCTTCGGCGGCGGGTaGGGCCTCAGTCCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQLFGGG*GLSPWE
Trigger: CTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGCCTGGGGGTGGCGCTaGGTGAGGTATAGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLAWGWR*VRYSWW
Trigger: CCACCAACTATACCTCACCAAGCGCCACCCCCAGGC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCATTCCGTGGGGACTaGGCCGGGCGGTCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPFRGD*AGRSGA
Trigger: TGCTCCCGACCGCCCGGCCAAGTCCCCACGGAATGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGCTGTCGATCTCCGGGTaGTCCGACTGGTACTCCATG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWLSISG*SDWYSM
Trigger: CATGGAGTACCAGTCGGACAACCCGGAGATCGACAG...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTCTGAGGTCTCGGTGTaGGTGGGGACCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSEVSV*VGTCRG
Trigger: TCCCCTGCAGGTCCCCACCAACACCGAGACCTCAGA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCAGGAGACCGGGGCTaGCTCCCATTTCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSGDRG*LPFLPH
Trigger: GTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGTGGGCCAGGCTGCTaGCTGGGCTCAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCCGPGC*LGSGRQ
Trigger: CTGCCTGCCTGAGCCCAGCAAGCAGCCTGGCCCACA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTGGTTGGCTGTGCCTaGGCCCTGGGTTTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSLVGCA*ALGFLG
Trigger: GCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCAG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGTTTTGGGACTGGCATaGACTGAGGCGTGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRVLGLA*TEAWLS
Trigger: GGACAACCACGCCTCAGTCAATGCCAGTCCCAAAAC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACCCAGCCAGGGCTTCCTaGGGATCGCAGGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHPARAS*GSQGLV
Trigger: AACAAGCCCCTGCGATCCCAAGGAAGCCCTGGCTGG...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGGGACACTCCTGGTGGTaGGATGGCAGCTCACAACCT +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWGHSWW*DGSSQP
Trigger: AGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCC...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACTTTCCCTCCGCATCTaGGCCTCTGGCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVLSLRI*ASGSRP
Trigger: CGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAAG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGGGGTGCACTGGGAACTaGAGTGCTTTGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSEGCTGN*SALLGV
Trigger: CACCCCCAGCAAAGCACTCAAGTTCCCAGTGCACCC...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGGGCCGGGTTTGGCTTaGGGGGTGGCGGGCTTCATC +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQGPGLA*GVAGFI
Trigger: GATGAAGCCCGCCACCCCCAAAGCCAAACCCGGCCC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCCTTGGTGCAGCTCTaGGCTTGGGCTCGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPLVQL*AWARAG
Trigger: CCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCGTCCCAGGCCTGGGTaGGGTCGGTGCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCRPRPG*GRCMRV
Trigger: CACCCTCATGCACCGACCCAACCCAGGCCTGGGACG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp AGAAAGAGACCTCATCATCAAACAAGCTTGGAGGATCCTTGGCACTaGAGCCAGAGGCATCAGGAGTGGGGCCTTCAGGCCCCTGGACTC +
Preference number: 5 (lower is better)
Translates to: RKRPHHQTSLEDPWH*SQRHQEWGLQAPGL
Trigger: GAGTCCAGGGGCCTGAAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGGAGGGAAGAGCTGGGAGAAAGAGACCTCATCATCAAACAAGCTTaGAGGATCCTTGGCACTGGAGCCAGAGGCATCAGGAGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: WREELGERDLIIKQA*RILGTGARGIRSGA
Trigger: GGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCTCTTCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TTCTTTAAAGGGATTTTGAAGCCAGTTAGTCTCTGCCCGAAGAGCTaGCTGAGGAGGTCACTCTGGGCCTCGGCCGTCCGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: FFKGILKPVSLCPKS*LRRSLWASAVRWVC
Trigger: ACACACCCACCGGACGGCCGAGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCCGCAGGGAAGGGTTTaGTGCTGGCCCCATGCAGTG +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWPQGRV*CWPHAV
Trigger: CACTGCATGGGGCCAGCACAAAACCCTTCCCTGCGG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGCAGTTTCAGGCTCCTaGGCCTCCTGGGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHAVSGS*ASWGKS
Trigger: GGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTGC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTCGGGGCTGCACTTaGCTAAACTCCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGRGCT*LNSRHP
Trigger: TGGATGCCGGGAGTTTAGCAAAGTGCAGCCCCGACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCTGGGTTTTCTCGGCTaGGCCAAGCAAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSELGFLG*AKQAPM
Trigger: CATTGGGGCTTGCTTGGCCAAGCCGAGAAAACCCAG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGATCGCAGGGGCTTGTaGTCAAAGACGGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLDRRGL*SKTGEP
Trigger: TGGCTCCCCCGTCTTTGACAACAAGCCCCTGCGATC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTGCCGACCTGTCCTTaGATGAGCTCTGGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWLPTCP*MSSGSP
Trigger: CGGGCTGCCAGAGCTCATCAAAGGACAGGTCGGCAG...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGGAACTTGAGTGCTTaGCTGGGGGTGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGNLSA*LGVDAA
Trigger: GGCAGCATCCACCCCCAGCAAAGCACTCAAGTTCCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCTGCCACCTCCTGTCTaGGTGCCGGGGCGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFLPPPV*VPGRGL
Trigger: AAGCCCTCGCCCCGGCACCAAGACAGGAGGTGGCAG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCTTGGTGCAGCTCTaGGCTTGGGCTCGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPLVQL*AWARAG
Trigger: CCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGCTCACCAGCTTCCCTaGGCCCCTTGGTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPAHQLP*APWCSS
Trigger: AGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAGC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTGGTTTGTTCTGGCTGTaGGGCTTGGGCTTGGTCGGG +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLGLFWL*GLGLVG
Trigger: CCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACC...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTGTCGGTGCCCACGGTTTGTTCTGGCTGTaGGGCTTGGGCTTGGTCGGG +
Preference number: 5 (lower is better)
Translates to: NGRLCKSPNIGFCGVGAHGLFWL*GLGLVG
Trigger: CCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACC...GTGGGCACCGACACCACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTTCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRSRPEQ*HKKSSG
Trigger: GCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGA...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGAGGGCCCCTCCGCACTaGGTTTGCGACACTCCGGAG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQRAPPH*VCDTPE
Trigger: CTCCGGAGTGTCGCAAACCAAGTGCGGAGGGGCCCT...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGCCTGGGGGTGGCGCTaGGTGAGGTATAGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQAWGWR*VRYSWW
Trigger: CCACCAACTATACCTCACCAAGCGCCACCCCCAGGC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTATGAGGCTGTCCAGCTaGGCGTCATCCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLMRLSS*ASSSMS
Trigger: GGACATGGAGGATGACGCCAAGCTGGACAGCCTCAT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTTGGTACTCCATGCCGTaGAGCGCCTCTGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLWYSMP*SASVMR
Trigger: CCTCATCACAGAGGCGCTCAACGGCATGGAGTACCA...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTTCAGAATGAGCTCCTaGCCCCAGGCGCCGCCCCGA +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFFRMSS*PQAPPR
Trigger: TCGGGGCGGCGCCTGGGGCAAGGAGCTCATTCTGAA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTCAGGAGACCGGGGCTaGCTCCCATTTCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCSGDRG*LPFLPH
Trigger: GTGCGGGAGAAATGGGAGCAAGCCCCGGTCTCCTGA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTAGGCTTCCCGACGGCTaGGGGGTGCCGGTGTCATGT +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFRLPDG*GVPVSC
Trigger: ACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCCACTGCAGGGAGAGTaGTCACCTGCACACCCCCTG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCPLQGE*SPAHPL
Trigger: CAGGGGGTGTGCAGGTGACAACTCTCCCTGCAGTGG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCTGGGTTTTCTCGGCTaGGCCAAGCAAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLLGFLG*AKQAPM
Trigger: CATTGGGGCTTGCTTGGCCAAGCCGAGAAAACCCAG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCGGTCAGCGCTGTTTaGGGACTGGCATTGACTGAG +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLPVSAV*GLALTE
Trigger: CTCAGTCAATGCCAGTCCCAAAACAGCGCTGACCGG...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGGGATCGCAGGGGCTaGTTGTCAAAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPWDRRG*LSKTGE
Trigger: CTCCCCCGTCTTTGACAACAAGCCCCTGCGATCCCA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCGGCGGGCAGTATTGCTaGGAGAATACGAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLGGQYC*ENTRSG
Trigger: GCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCC...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCCCGAGGCGGGCAGTATaGCTTGGAGAATACGAGGAG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLPRRAV*LGEYEE
Trigger: CTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGG...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTCCCTTCTGCCCAGTaGGCTGTTCCCCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLPSAQ*AVPPEL
Trigger: CAGCTCTGGGGGAACAGCCAACTGGGCAGAAGGGAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCTCCCTTCTGCCCAGTaGGCTGTTCCCCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQLPSAQ*AVPPEL
Trigger: CAGCTCTGGGGGAACAGCCAACTGGGCAGAAGGGAG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTCGCTCCCAGACTCTTaGCACACACCCAACGCCTTG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSLPDS*HTPNAL
Trigger: CAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GTCTTTCACCCCCAGCCTTCCAGCAAGAAAGGGAATGCTGCCCACCTGGGCCCTCAGAAAGCACAGGTCTaGCATCTCAAACTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: VFHPQPSSKKGNAAHLGPQKAQV*HLKLGA
Trigger: AGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTG...AGGGCCCAGGTGGGCAGCATTCCCTTTCTTGCTGGAAGGCTGGGGGTGAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGTCACGCAGGTGCTCGTaGTACATCCAGACGTCGGCC +
Preference number: 5 (lower is better)
Translates to: TSLLHVGEREVVQISKHWSRRCS*YIQTSA
Trigger: GGCCGACGTCTGGATGTACAACGAGCACCTGCGTGA...CCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCCCCAGAGGGAGAGCTaGCTGGAGAAGAGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALPQRES*LEKRPG
Trigger: CCCGGGCCTCTTCTCCAGCAAGCTCTCCCTCTGGGG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCTTTCCCTCCGCATCTaGGCCTCTGGCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALLSLRI*ASGSRP
Trigger: CGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAAG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCGGGAACTTGAGTGCTTaGCTGGGGGTGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPGNLSA*LGVDAA
Trigger: GGCAGCATCCACCCCCAGCAAAGCACTCAAGTTCCC...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTAGGCCTGTTGTGCTCTaGGGGGACCAGGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFRPVVL*GDQAAQ
Trigger: CTGAGCCGCCTGGTCCCCCAAGAGCACAACAGGCCT...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TCTTGTGAGCTGGCGGCCTCCTTATTCTTAGGAAATGAAAGTTCCTaGTCGGGGCTGCACTTTGCTAAACTCCCGGCATCCAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SCELAASLFLGNESS*SGLHFAKLPASSCG
Trigger: CCCACAGCTGGATGCCGGGAGTTTAGCAAAGTGCAGCCCCGACCAGGAACTTTCATTTCCTAAGAATAAGGAGGCCGCCAGCTCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTCTTTCGGGAAGGATTTaGGTCAGGCTCTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGLSGRI*VRLLCK
Trigger: TTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAG...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGGTCGGGGCTGCACTTaGCTAAACTCCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCGRGCT*LNSRHP
Trigger: TGGATGCCGGGAGTTTAGCAAAGTGCAGCCCCGACC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCATACACAGGCGGGACTaGGCACAGGGACCAACCAAG +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPIHRRD*AQGPTK
Trigger: CTTGGTTGGTCCCTGTGCCAAGTCCCGCCTGTGTAT...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGGATCGCAGGGGCTTGTaGTCAAAGACGGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQDRRGL*SKTGEP
Trigger: TGGCTCCCCCGTCTTTGACAACAAGCCCCTGCGATC...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCTGCGTAACTGGCCATaGCAGGGGATGGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCLRNWP*QGMVWS
Trigger: GCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCACACACCCAACGCCTaGGTCTCTCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQHTPNA*VSLGPQ
Trigger: CTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCATCATCAAACAAGCTaGGAGGATCCTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSHHQTS*EDPWHW
Trigger: CCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCCCTCCGCACTTGGTTaGCGACACTCCGGAGGCGTT +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFPSALG*RHSGGV
Trigger: AACGCCTCCGGAGTGTCGCAAACCAAGTGCGGAGGG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp TGCGGGTTCCTCTTTCTAGTCAAGCGACCGCCTGGAGGGAAGAGCTaGGAGAAAGAGACCTCATCATCAAACAAGCTTGGAGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: CGFLFLVKRPPGGKS*EKETSSSNKLGGSL
Trigger: CAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCTCTTCCCTCCAGGCGGTCGCTTGACTAGAAAGAGGAACCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 90 bp CTTCCCGTAGACATGCGGGTTCCTCTTTCTAGTCAAGCGACCGCCTaGAGGGAAGAGCTGGGAGAAAGAGACCTCATCATCAAACAAGCT +
Preference number: 5 (lower is better)
Translates to: LPVDMRVPLSSQATA*REELGERDLIIKQA
Trigger: AGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCTCTTCCCTCCAGGCGGTCGCTTGACTAGAAAGAGGAACCCGCATGTCTACGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTTGGTACTCCATGCCGTaGAGCGCCTCTGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCWYSMP*SASVMR
Trigger: CCTCATCACAGAGGCGCTCAACGGCATGGAGTACCA...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGACAGAACACTGGGTTaGGGGCAGGCGGTACTTGAG +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCDRTLG*GQAVLE
Trigger: CTCAAGTACCGCCTGCCCCAAACCCAGTGTTCTGTC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACAGCCAGCCAGGTCTTaGGGTCCGAGGAACAACTCA +
Preference number: 5 (lower is better)
Translates to: QLTSLLHVGEREVVQISKQPARS*GPRNNS
Trigger: TGAGTTGTTCCTCGGACCCAAAGACCTGGCTGGCTG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATGGCAAAGTCCAGTCTaGGAGGCTCCGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVWQSPV*EAPAFC
Trigger: GCAGAAAGCCGGAGCCTCCAAGACTGGACTTTGCCA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTTGGCAAAGTCCAGTCTaGGAGGCTCCGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCWQSPV*EAPAFC
Trigger: GCAGAAAGCCGGAGCCTCCAAGACTGGACTTTGCCA...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTATACACAGGCGGGACTaGGCACAGGGACCAACCAAG +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCIHRRD*AQGPTK
Trigger: CTTGGTTGGTCCCTGTGCCAAGTCCCGCCTGTGTAT...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACCGGTCAGCGCTGTTTaGGGACTGGCATTGACTGAG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVPVSAV*GLALTE
Trigger: CTCAGTCAATGCCAGTCCCAAAACAGCGCTGACCGG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTAGGCCCATGTGGAGCTaGGCCCTTCCACTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALRPMWS*ALPLAV
Trigger: AACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTATCGCTCCCAGACTCTTaGCACACACCCAACGCCTTG +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVSLPDS*HTPNAL
Trigger: CAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGA...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCTCTTGCATCTCAAACTaGGTGCTGAGCACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSSCISN*VLSTSK
Trigger: CTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGA...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTGGACACTCCTGGTGGTaGGATGGCAGCTCACAACCT +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCGHSWW*DGSSQP
Trigger: AGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCC...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTCAAGGCCTGAGCAGTaGCACAAGAAGTCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLSRPEQ*HKKSSG
Trigger: GCCACTTGACTTCTTGTGCAACTGCTCAGGCCTTGA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCACTGCCTTCCCCCACGTGTTTCTAAGGTCACTTaGGAATTCCAGCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: PGGSEATLLSSEHCLPPRVSKVT*EFQQQQ
Trigger: CTGCTGTTGCTGGAATTCCAAAGTGACCTTAGAAAC...ACGTGGGGGAAGGCAGTGCTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTGCTGCCCTGCTTCCCTaGCATTTCTCTAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCAALLP*HFSSRT
Trigger: AGTCCTGCTAGAGAAATGCAAGGGAAGCAGGGCAGC...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTAGCTGCCCTGCTTCCCTaGCATTTCTCTAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVAALLP*HFSSRT
Trigger: AGTCCTGCTAGAGAAATGCAAGGGAAGCAGGGCAGC...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTGGCGGGCAGTATTGCTaGGAGAATACGAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFGGQYC*ENTRSG
Trigger: GCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCC...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCATCATCAAACAAGCTaGGAGGATCCTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSHHQTS*EDPWHW
Trigger: CCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAGGGGCGGTTTCTTCCCAGTTCCATACGGGAACCCGGTTCCTGGGGTCAAGGTTTCTTTAAAGGGATTTaGAAGCCAGTTAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QGRFLPSSIREPGSWGQGFFKGI*KPVSLC
Trigger: GCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGAA...ACCTTGACCCCAGGAACCGGGTTCCCGTATGGAACTGGGAAGAAACCGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTTGCACAAGAAGTCAAGTGGCCACAGAGTGGACCATCTCAGGGAGCCGGAGCCAAAACTGGAGATCTTaGAAGACAGAACACTGGGTT +
Preference number: 5 (lower is better)
Translates to: SCTRSQVATEWTISGSRSQNWRS*KTEHWV
Trigger: AACCCAGTGTTCTGTCTTCAAAGATCTCCAGTTTTG...GCTCCGGCTCCCTGAGATGGTCCACTCTGTGGCCACTTGACTTCTTGTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTCAGCCAGCCAGGTCTTaGGGTCCGAGGAACAACTCA +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALQPARS*GPRNNS
Trigger: TGAGTTGTTCCTCGGACCCAAAGACCTGGCTGGCTG...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCTCTTGCATCTCAAACTaGGTGCTGAGCACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSSCISN*VLSTSK
Trigger: CTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGA...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGCAGCAGGCGAAGGACTTCTaGATGATGCGCATAACCGTG +
Preference number: 5 (lower is better)
Translates to: RNFRVTLQIGGAQSSVQQQAKDF*MMRITV
Trigger: CACGGTTATGCGCATCATCAAGAAGTCCTTCGCCTG...CTGCTGTACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACAGACACCATGTGGCTaGAGGACACCTCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVQTPCG*RTPPSL
Trigger: AAGAGAAGGAGGTGTCCTCAAGCCACATGGTGTCTG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCAGACACCATGTGGCTaGAGGACACCTCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCQTPCG*RTPPSL
Trigger: AAGAGAAGGAGGTGTCCTCAAGCCACATGGTGTCTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTTCCGGTCCCAGGCTCTaGCTCCTAGAAATTACTCGG +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFSGPRL*LLEITR
Trigger: CCGAGTAATTTCTAGGAGCAAGAGCCTGGGACCGGA...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACACTCCGGAGGCGTTTTGAATGGCCTACAACACCTTCCAGAGAGGCGGTCTGGTGTCTCTTCAAGTACTaGGTACCAAGAAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: TLRRRFEWPTTPSREAVWCLFKY*VPRKQL
Trigger: CAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACA...CCAGACCGCCTCTCTGGAAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GCAGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTAACTTCAGAGTAACATaGCAAATAGGCGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: AARLRGNLPPSHGCLNLLNFRVT*QIGGAQ
Trigger: CTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTT...AAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp GAGGGGATGGGCTGCTGTCTCTTCAAGTACTTGGTACCAAGAAAACAGCTGTGTCACTCCGGAGGCGTTTaGAATGGCCTACAACACCTT +
Preference number: 5 (lower is better)
Translates to: EGMGCCLFKYLVPRKQLCHSGGV*NGLQHL
Trigger: AAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTG...ACACAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACAGCAGCCCATCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACATTGGCTTCTGTCACTCCGGAGGCGTTTaGAATGGCCTACAACACCTT +
Preference number: 5 (lower is better)
Translates to: FSMWGNGRLCKSPNIGFCHSGGV*NGLQHL
Trigger: AAGGTGTTGTAGGCCATTCAAAACGCCTCCGGAGTG...ACAGAAGCCAATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp AATTCGGTGACCAATTTCTGGATCTCCAGTTCATCCTCGGACAGGTaGCTCATAAGAGCAACGCTACATCCACTCCCCTTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: NSVTNFWISSSSSDR*LIRATLHPLPFPGK
Trigger: TTTGCCTGGGAAGGGGAGTGGATGTAGCGTTGCTCTTATGAGTCACCTGTCCGAGGATGAACTGGAGATCCAGAAATTGGTCACCGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 90 bp CCCCACGTGTGTCTTTGCTCCTTTGCAGCTGACTTTCTAATTCGGTaGCCAATTTCTGGATCTCCAGTTCATCCTCGGACAGGTGACTCA +
Preference number: 5 (lower is better)
Translates to: PHVCLCSFAADFLIR*PISGSPVHPRTGDS
Trigger: TGAGTCACCTGTCCGAGGATGAACTGGAGATCCAGAAATTGGTCACCGAATTAGAAAGTCAGCTGCAAAGGAGCAAAGACACACGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp TGTTGTGCTCTTGGGGGACCAGGCGGCTCAGAAGCAACCCTTCTAAGTAGTGAGCAAAACTGGAGATCTTaGAAGACAGAACACTGGGTT +
Preference number: 5 (lower is better)
Translates to: CCALGGPGGSEATLLSSEQNWRS*KTEHWV
Trigger: AACCCAGTGTTCTGTCTTCAAAGATCTCCAGTTTTG...CTCACTACTTAGAAGGGTTGCTTCTGAGCCGCCTGGTCCCCCAAGAGCACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCAAGACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCGGTCTGGGCCTGATTaGGTCTCTTTCAAATATCAA +
Preference number: 5 (lower is better)
Translates to: SKTKREPTTIPRLPQLTSRSGPD*VSFKYQ
Trigger: TTGATATTTGAAAGAGACCAAATCAGGCCCAGACCG...GGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCATTTTGGTCAGGCTCTaGTGTAAACTGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLILVRL*CKLSEK
Trigger: CTTCTCTGACAGTTTACACAAGAGCCTGACCAAAAT...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAAAACTTCAGAGTAACATaGCAAATAGGCGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QLTSLLHVGEREVVQISKNFRVT*QIGGAQ
Trigger: CTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTT...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp CAACTTACTTCCCTTCTCCATGTGGGGGAACGGGAGGTTGTGCAAATCTCCAAACTTTCGGGAAGGATTTaGGTCAGGCTCTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QLTSLLHVGEREVVQISKLSGRI*VRLLCK
Trigger: TTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAG...TTTGGAGATTTGCACAACCTCCCGTTCCCCCACATGGAGAAGGGAAGTAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTGGTTTCAGAAAGCACAGGTCTaGCATCTCAAACTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: TSHYDVYSTTSGPLRTWFQKAQV*HLKLGA
Trigger: AGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTG...AAACCAAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp ACTAAGAGGGAACCTACCACCATCCCACGGCTGCCTCAACTTACTTCCCTTCTCTTCTTTAAAGGGATTTaGAAGCCAGTTAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: TKREPTTIPRLPQLTSLLFFKGI*KPVSLC
Trigger: GCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGAA...GAGAAGGGAAGTAAGTTGAGGCAGCCGTGGGATGGTGGTAGGTTCCCTCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGTACTTGGTACCAAGAAAACAGCTGTGTGGTCTCAAAAGGGCTGCAGTGGCCCTGTCTCTTCAAGTACTaGGTACCAAGAAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: STWYQENSCVVSKGLQWPCLFKY*VPRKQL
Trigger: CAGCTGTTTTCTTGGTACCAAGTACTTGAAGAGACA...GGGCCACTGCAGCCCTTTTGAGACCACACAGCTGTTTTCTTGGTACCAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTTGGGGGAACGGGAGGTaGTGCAAATCTCCAAACATT +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALWGNGR*CKSPNI
Trigger: AATGTTTGGAGATTTGCACAACCTCCCGTTCCCCCA...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AGCACCAGAAACTTCAGAGTAACATTGCAAATAGGCGGAGCCCAGAGCTCCGTACGGTCTGGGCCTGATTaGGTCTCTTTCAAATATCAA +
Preference number: 5 (lower is better)
Translates to: STRNFRVTLQIGGAQSSVRSGPD*VSFKYQ
Trigger: TTGATATTTGAAAGAGACCAAATCAGGCCCAGACCG...TACGGAGCTCTGGGCTCCGCCTATTTGCAATGTTACTCTGAAGTTTCTGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS-3UTR CAA 90 bp AAAAGACAAGTCACTATGATGTTTACAGTACAACCTCAGGGCCCCTCCGCACTTATTTTGGTCAGGCTCTaGTGTAAACTGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: KRQVTMMFTVQPQGPSALILVRL*CKLSEK
Trigger: CTTCTCTGACAGTTTACACAAGAGCCTGACCAAAAT...AAGTGCGGAGGGGCCCTGAGGTTGTACTGTAAACATCATAGTGACTTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GCTCCCGTCTCCAGGCTTCGAGACGGGCCACGGGCCTaGGGGCTCCTGCCGGGGCCCGGGCGAGACCCGCCC +
Preference number: 6 (lower is better)
Translates to: APVSRLRDGPRA*GLLPGPGRDPP
Trigger: GGGCGGGTCTCGCCCGGGCCCCGGCAGGAGCCCTCAGGCCCGTGGCCCGTCTCGAAGCCTGGAGACGGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCGCAGGCTGGGTGGGCAGCGGGTAGGCAGGGCCCGTaGCCACGGCCTCCTCCGGCCACGCTCCCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: AQAGWAAGRQGP*PRPPPATLPGA
Trigger: AGCCCCAGGGAGCGTGGCCGGAGGAGGCCGTGGGCACGGGCCCTGCCTACCCGCTGCCCACCCAGCCTGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCTCCGCGGGGGCTCCCGGGTGTGGCCGGTGCTTCCTaGCCTTGTGCCGGCTCAGGCCCGGCCCGGAGCGGA +
Preference number: 6 (lower is better)
Translates to: APRGLPGVAGAS*PCAGSGPARSG
Trigger: TCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGCCGCTGGGCTCGGCTCCGCGGGGGCTCCCGGGTGTaGCCGGTGCTTCCTGGCCTTGTGCCGGCTCAGGCC +
Preference number: 6 (lower is better)
Translates to: GRWARLRGGSRV*PVLPGLVPAQA
Trigger: GGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGCCGAGCCCAGCGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CTCGGCTCCGCGGGGGCTCCCGGGTGTGGCCGGTGCTTCCTGGCCTaGTGCCGGCTCAGGCCCGGCCCGGAGCGGAAGGAGGCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: LGSAGAPGCGRCFLA*CRLRPGPERKEAAQ
Trigger: CTGCGCAGCCTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGCGGAGCCGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CGCCGGGCCCAGGGGCACTGCCGGGCATGGCCACCCTaGGCCGTTTGCTGGGCAGTGTGCCCTCGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: RRAQGHCRAWPP*AVCWAVCPRGP
Trigger: GGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCCCTGGGCCCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GCGGGGGCTCCCGGGTGTGGCCGGTGCTTCCTGGCCTaGTGCCGGCTCAGGCCCGGCCCGGAGCGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: AGAPGCGRCFLA*CRLRPGPERKE
Trigger: CTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGGGCTCCCGGGTGTGGCCGGTGCTTCCTGGCCTTGTaGCGGCTCAGGCCCGGCCCGGAGCGGAAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: GAPGCGRCFLAL*RLRPGPERKEA
Trigger: AGCCTCCTTCCGCTCCGGGCCGGGCCTGAGCCGGCACAAGGCCAGGAAGCACCGGCCACACCCGGGAGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTTGCCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTaGCGGCGGAGCGCTTGCCCCTGTGGTGTTTGGGCG +
Preference number: 6 (lower is better)
Translates to: LAPTGLPGSRRP*RRSACPCGVWA
Trigger: CGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CCTCGGACTCCGAGGCGAAGTCGTACTCGCGGAGCCTaGGGTCCTCAGCTCCGGGCCGGGGCCTCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: PRTPRRSRTRGA*GPQLRAGASPP
Trigger: CGGCGGGGAGGCCCCGGCCCGGAGCTGAGGACCGCAGGCTCCGCGAGTACGACTTCGCCTCGGAGTCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS GCA 72 bp GCCCAGGGCCCGGCCTTGCTCTGCGCGTGCCTCTCCTaGAGGTGCCCCCGCAGCAGCTCCCGCGAGCCAAAC +
Preference number: 6 (lower is better)
Translates to: AQGPALLCACLS*RCPRSSSREPN
Trigger: GTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GTGGCGCAGAGCTCGCAGGCATACAGCGGCGTGTGCTaGAGCTCCGGCCGCTCCAGCAGCCCGTGCGCCCCG +
Preference number: 6 (lower is better)
Translates to: VAQSSQAYSGVC*SSGRSSSPCAP
Trigger: CGGGGCGCACGGGCTGCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGCCTGCGAGCTCTGCGCCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CGGGCATGGCCACCCTGCGCCGTTTGCTGGGCAGTGTaGCCTCGAGGGCCCGGGCCTTCTGTCCCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: RAWPPCAVCWAV*PRGPGPSVPAL
Trigger: GAGCGCCGGGACAGAAGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTaGGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PWGAVLARLPDG*GVPVSCLLGGG
Trigger: GCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TCTTGCCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTaGCCGGCGGAGCGCTTGCCCCTGTGGTGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: SCPHGSPGLPAA*PAERLPLWCLG
Trigger: GCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GCTTCTCCCTCTTGCCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTaGCCGGCGGAGCGCTTGCCCCTGTGGTGTTTGGGCGCGGGTTCC +
Preference number: 6 (lower is better)
Translates to: ASPSCPHGSPGLPAA*PAERLPLWCLGAGS
Trigger: GGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCAGGTGCCCCCGCAGCAGCTCCCGCGAGCCAAACCTaGGCTCCACGCACATGTAGCAGGTGGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: AGAPAAAPASQT*APRTCSRWAAA
Trigger: CGCCGCCGCCCACCTGCTACATGTGCGTGGAGCGCAGGTTTGGCTCGCGGGAGCTGCTGCGGGGGCACCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp ACCGTGGCGCAGAGCTCGCAGGCATACAGCGGCGTGTaGTGCAGCTCCGGCCGCTCCAGCAGCCCGTGCGCC +
Preference number: 6 (lower is better)
Translates to: TVAQSSQAYSGV*CSSGRSSSPCA
Trigger: GGCGCACGGGCTGCTGGAGCGGCCGGAGCTGCAGCACACGCCGCTGTATGCCTGCGAGCTCTGCGCCACGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CAGGGGCACTGCCGGGCATGGCCACCCTGCGCCGTTTaGTGGGCAGTGTGCCCTCGAGGGCCCGGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: QGHCRAWPPCAV*WAVCPRGPGPS
Trigger: AGAAGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTTaGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: RGAPCWRGFPTA*GCRCHVCWAAA
Trigger: AGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGGCACTGCCGGGCATGGCCACCCTGCGCCGTTTGCTaGGCAGTGTGCCCTCGAGGGCCCGGGCCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: GHCRAWPPCAVC*AVCPRGPGPSV
Trigger: GACAGAAGGCCCGGGCCCTCGAGGGCACACTGCCCAGCAAACGGCGCAGGGTGGCCATGCCCGGCAGTGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TCTCCCGGGCTCCCGGCGGCCTTGCCGGCGGAGCGCTaGCCCCTGTGGTGTTTGGGCGCGGGTTCCGTGATG +
Preference number: 6 (lower is better)
Translates to: SPGLPAALPAER*PLWCLGAGSVM
Trigger: CATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TCGGCCACCTCCTTCAGGCACATGCCGCACGCCCAGGGCCCGGCCTaGCTCTGCGCGTGCCTCTCCTGCAGGTGCCCCCGCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SATSFRHMPHAQGPA*LCACLSCRCPRSSS
Trigger: GGAGCTGCTGCGGGGGCACCTGCAGGAGAGGCACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGGTGGCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GGCGAGCTTCCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTaGGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGCTGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GELPWGAVLARLPDG*GVPVSCLLGGGCSG
Trigger: ACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CCTGTGTGCCCCCAGGACCACCCAGCAGGCTGCCCACACCTGGCGTaGGCGAGCTTCCGTGGGGCGCCGTGTTGGCGAGGCTTCCCGACG +
Preference number: 6 (lower is better)
Translates to: PVCPQDHPAGCPHLA*ASFRGAPCWRGFPT
Trigger: CGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTCCTGGGGGCACACAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GCACTTGTAGGAGGCCCGCCTGCCCTTGGCCGGCCGGCCTCTGCCTaGGGCCCTCCCTGCCCCTGCAGCCTCCTCTGTCCTTCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: ALVGGPPALGRPASA*GPPCPCSLLCPSAL
Trigger: CAGAGCCGAAGGACAGAGGAGGCTGCAGGGGCAGGGAGGGCCCAAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTGCCGGCGGAGCGCTaGCCCCTGTGGTGTTTGGGCGCGGGTTCCGTGATGCTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: PHGSPGLPAALPAER*PLWCLGAGSVMLFR
Trigger: TCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GGGTTTCGCCCTCTCGCCCGGGCTGTCTTTCTTGGCTTCTCCCTCTaGCCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTGCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: GFRPLARAVFLGFSL*PPRVSRAPGGLAGG
Trigger: TCCGCCGGCAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGGGCGAGAGGGCGAAACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CGCTGCGGGCTGTGCACCGCCAGGTGGCGCTGCAGCTTGAAGGGCTaGGGGAAGCGCTTCCCGCAGTGGTGGCAGTCGCGGGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RCGLCTARWRCSLKG*GKRFPQWWQSREGS
Trigger: GGACCCCTCCCGCGACTGCCACCACTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCTGCAGCGCCACCTGGCGGTGCACAGCCCGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGAAGAGCAGGTGCTGCCGGCCGTGTTGGTGGCCGGTaGCGGCAGTGGGGACTCGCTGGGGGAGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: GRAGAAGRVGGR*RQWGLAGGGSH
Trigger: GTGGGAGCCTCCCCCAGCGAGTCCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCGCCGTGTTGGCGAGGCTTCCCGACGGCTTGGGGGTaGCGGTGTCATGTCTGCTGGGCGGCGGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: APCWRGFPTAWG*RCHVCWAAAAL
Trigger: CAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCTTCCCGCAGTGGTGGCAGTCGCGGGAGGGGTCCTTaGAGGCCTCGTGCACCGGGGTGGCTTGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: ASRSGGSRGRGP*RPRAPGWLAGG
Trigger: CCCTCCTGCAAGCCACCCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCGACTGCCACCACTGCGGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGGGGCCTGGAGACCGCTGGTGGCCATCCTTGGCCCTaGCCAGGAGCAGGCCACAGAACTGCCGGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GGLETAGGHPWP*PGAGHRTAGGP
Trigger: TGGCCCACCGGCAGTTCTGTGGCCTGCTCCTGGCCAGGGCCAAGGATGGCCACCAGCGGTCTCCAGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTGAGGGGCGATCAGCACACTTGGGGCCTCCCTCCCTaGCGGCCGCTCCCGTCTCCAGGCTTCGAGACGGGC +
Preference number: 6 (lower is better)
Translates to: LRGDQHTWGLPP*RPLPSPGFETG
Trigger: GCCCGTCTCGAAGCCTGGAGACGGGAGCGGCCGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCCCCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CACCTGGCGTTGGCGAGCTTCCGTGGGGCGCCGTGTTaGCGAGGCTTCCCGACGGCTTGGGGGTGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: HLALASFRGAPC*RGFPTAWGCRC
Trigger: ACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGTGCCCCCAGGACCACCCAGCAGGCTGCCCACACCTaGCGTTGGCGAGCTTCCGTGGGGCGCCGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: CAPRTTQQAAHT*RWRASVGRRVG
Trigger: GCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTGCTGGGTGGTCCTGGGGGCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TCCTCGTGGGGCACGGTGGCCTGGCAGGTGCGCCGTTaGGAGGGTGGCTCTGTGCCTGTGCCGAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SSWGTVAWQVRR*EGGSVPVPSST
Trigger: GGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGCAGGGGCCGGCATCTCCAGGCCTCGCCAAGCCGCTaGGACCATGTGCAGCTCAGGAATGGCCTCCGGCCG +
Preference number: 6 (lower is better)
Translates to: GRGRHLQASPSR*DHVQLRNGLRP
Trigger: CGGCCGGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAGGCCTGGAGATGCCGGCCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGTGGAGCAGGGCCGGGAGAGAGCCCTCACTCAGGATaGGGCTGCTTCCCCGGGGAGGAGGCCTGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: GGAGPGESPHSG*GCFPGEEACPR
Trigger: GCGAGGACAGGCCTCCTCCCCGGGGAAGCAGCCCCATCCTGAGTGAGGGCTCTCTCCCGGCCCTGCTCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGGTGCCGGGGCGAGGGCTTCCACTGCCCTGGGAGCTaGGGCCGGGTTTGGCTTTGGGGGTGGCGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: WCRGEGFHCPGS*GRVWLWGWRAS
Trigger: TGAAGCCCGCCACCCCCAAAGCCAAACCCGGCCCCAGCTCCCAGGGCAGTGGAAGCCCTCGCCCCGGCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp ACACCTGGCGTTGGCGAGCTTCCGTGGGGCGCCGTGTaGGCGAGGCTTCCCGACGGCTTGGGGGTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: TPGVGELPWGAV*ARLPDGLGVPV
Trigger: CACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CGCTTCCCGCAGTGGTGGCAGTCGCGGGAGGGGTCCTaGCAGGCCTCGTGCACCGGGGTGGCTTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RFPQWWQSREGS*QASCTGVACRR
Trigger: CCTCCTGCAAGCCACCCCGGTGCACGAGGCCTGCAAGGACCCCTCCCGCGACTGCCACCACTGCGGGAAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GGGCTCCCGGCGGCCTTGCCGGCGGAGCGCTTGCCCCTGTGGTGTTaGGGCGCGGGTTCCGTGATGCTGTTCAGAAGGTGGGCGACAGCG +
Preference number: 6 (lower is better)
Translates to: GLPAALPAERLPLWC*GAGSVMLFRRWATA
Trigger: CGCTGTCGCCCACCTTCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGCTGGCACTTTTGGGCTAGGGGCTCTAGAGGCTGCTaGGCAGGCAAGGCCGCTGGGCTCGGCTCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: GWHFWARGSRGC*AGKAAGLGSAG
Trigger: CCCCGCGGAGCCGAGCCCAGCGGCCTTGCCTGCTCAGCAGCCTCTAGAGCCCCTAGCCCAAAAGTGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GCTGCGGGCTGTGCACCGCCAGGTGGCGCTGCAGCTTaGAGGGCTTGGGGAAGCGCTTCCCGCAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: AAGCAPPGGAAA*RAWGSASRSGG
Trigger: GCCACCACTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCTGCAGCGCCACCTGGCGGTGCACAGCCCGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGCTGCTGGACATCGGCGACAGGGAAGAGCAGGTGCTaGCGGCCGTGTTGGTGGCCGGTGACGGCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GCWTSATGKSRC*RPCWWPVTAVG
Trigger: CCCCACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGGCCTGGCAGGTGCGCCGTTGGGAGGGTGGCTCTGTaGCTGTGCCGAGCTCCACCCTGCCCACCGACTCAG +
Preference number: 6 (lower is better)
Translates to: WPGRCAVGRVAL*LCRAPPCPPTQ
Trigger: CTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CGGTCTCAGGGGTCCCTGGGTCCTCCGGCTCCTTGCTaGTGGTCCCCATCTCACCTTCCAGGCAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: RSQGSLGPPAPC*WSPSHLPGRRG
Trigger: CCCCCGCCTGCCTGGAAGGTGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCCCGGTCTCAGGGGTCCCTGGGTCCTCCGGCTCCTTaGTGCTGGTCCCCATCTCACCTTCCAGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: ARSQGSLGPPAP*CWSPSHLPGRR
Trigger: CCGCCTGCCTGGAAGGTGAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTCCGCGCCTGCCCCCTGCGGGCGAAGCGGACCGCGTaGTCACGCAGGTGCTCGTTGTACATCCAGACGTCG +
Preference number: 6 (lower is better)
Translates to: LRACPLRAKRTA*SRRCSLYIQTS
Trigger: CGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGGGCAGGCGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTCTCGCCCGGGCTGTCTTTCTTGGCTTCTCCCTCTTaGCCCCACGGGTCTCCCGGGCTCCCGGCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LSPGLSFLASPS*PHGSPGLPAAL
Trigger: CAAGGCCGCCGGGAGCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGGGCGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCCAAGCTCTTCGGCGGCGGGTTGGGCCTCAGTCCTTaGGAGGCCCGGCCTGAGTGGAGCTCCAGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: AKLFGGGLGLSP*EARPEWSSSPR
Trigger: CCTGGGACTGGAGCTCCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAGCTTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCGGGGAAAGGCAGCCGGCTCAGCATCTCCATTCCGTaGGGACTTGGCCGGGCGGTCGGGAGCACTTGGGGC +
Preference number: 6 (lower is better)
Translates to: AGKGSRLSISIP*GLGRAVGSTWG
Trigger: GCCCCAAGTGCTCCCGACCGCCCGGCCAAGTCCCCACGGAATGGAGATGCTGAGCCGGCTGCCTTTCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GATCCTTGGGGGCCACTGAGGGGCGATCAGCACACTTaGGGCCTCCCTCCCTGGCGGCCGCTCCCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: DPWGPLRGDQHT*GLPPWRPLPSP
Trigger: TGGAGACGGGAGCGGCCGCCAGGGAGGGAGGCCCCAAGTGTGCTGATCGCCCCTCAGTGGCCCCCAAGGATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCAGGCTGCCCACACCTGGCGTTGGCGAGCTTCCGTaGGGCGCCGTGTTGGCGAGGCTTCCCGACGGCTTG +
Preference number: 6 (lower is better)
Translates to: SRLPTPGVGELP*GAVLARLPDGL
Trigger: CAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCTGTGGCTCGAGGGAACCGGCATCCTCGCCGTCCTaGCAAAGGCAGGAGCTGCTGGCCGGCGGGGCATCC +
Preference number: 6 (lower is better)
Translates to: SCGSREPASSPS*QRQELLAGGAS
Trigger: GGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCCAGGACGGCGAGGATGCCGGTTCCCTCGAGCCACAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCTGCCGAGAACGTGTCCTCGTGGGGCACGGTGGCCTaGCAGGTGCGCCGTTGGGAGGGTGGCTCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: AAENVSSWGTVA*QVRRWEGGSVP
Trigger: AGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGTCAGCTGCCGAGAACGTGTCCTCGTGGGGCACGGTaGCCTGGCAGGTGCGCCGTTGGGAGGGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GQLPRTCPRGAR*PGRCAVGRVAL
Trigger: CAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp ACGCGCGTGAGGTCAGCTGCCGAGAACGTGTCCTCGTaGGGCACGGTGGCCTGGCAGGTGCGCCGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: TRVRSAAENVSS*GTVAWQVRRWE
Trigger: CTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGGGCCTTCAGGCCCCTGGACTCCACCCTGGGTGTCTaGGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: GAFRPLDSTLGV*VVREALEAAAG
Trigger: ACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTGGGCCCAGCGTGGGGTCACCGCCCTCCTCAAAGCTaGGCTGGGTTGGCAGCGGGAGCACCGGCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: LGPAWGHRPPQS*AGLAAGAPASH
Trigger: GTGAGAAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCGGTGACCCCACGCTGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCACACTTTGCACTTGTAGGAGGCCCGCCTGCCCTTaGCCGGCCGGCCTCTGCCTTGGGCCCTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: STLCTCRRPACP*PAGLCLGPSLP
Trigger: GGGCAGGGAGGGCCCAAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCGAGCCAAACCTGCGCTCCACGCACATGTAGCAGGTaGGCGGCGGCGCGGGCGTGTGGGCCAGCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: ASQTCAPRTCSR*AAARACGPACA
Trigger: TGCACAAGCTGGCCCACACGCCCGCGCCGCCGCCCACCTGCTACATGTGCGTGGAGCGCAGGTTTGGCTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCCGGGGTTTCGCCCTCTCGCCCGGGCTGTCTTTCTTaGCTTCTCCCTCTTGCCCCCACGGGTCTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PGVSPSRPGCLS*LLPLAPTGLPG
Trigger: GCCCGGGAGACCCGTGGGGGCAAGAGGGAGAAGCCAAGAAAGACAGCCCGGGCGAGAGGGCGAAACCCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp AGGCTGCCCACACCTGGCGTTGGCGAGCTTCCGTGGGGCGCCGTGTaGGCGAGGCTTCCCGACGGCTTGGGGGTGCCGGTGTCATGTCTG +
Preference number: 6 (lower is better)
Translates to: RLPTPGVGELPWGAV*ARLPDGLGVPVSCL
Trigger: CAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCCTCGCCAACACGGCGCCCCACGGAAGCTCGCCAACGCCAGGTGTGGGCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTGGGCTGCTGGACATCGGCGACAGGGAAGAGCAGGTaGTGCCGGCCGTGTTGGTGGCCGGTGACGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGCWTSATGKSR*CRPCWWPVTAV
Trigger: CACTGCCGTCACCGGCCACCAACACGGCCGGCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCAGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGCTTCCCGACGGCTTGGGGGTGCCGGTGTCATGTCTaGTGGGCGGCGGCTGCTCTGGTATCAGGAGACCGG +
Preference number: 6 (lower is better)
Translates to: GFPTAWGCRCHV*WAAAALVSGDR
Trigger: CCGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGGATGAGGACTCCAAGGTCGGTGGCGATGCAGCCCTaGCTGGCTCCGTCTCAGCGGTGCCAGGTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GMRTPRSVAMQP*LAPSQRCQVGS
Trigger: GGAGCCCACCTGGCACCGCTGAGACGGAGCCAGGCAGGGCTGCATCGCCACCGACCTTGGAGTCCTCATCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp AGAACGTGTCCTCGTGGGGCACGGTGGCCTGGCAGGTaGGCCGTTGGGAGGGTGGCTCTGTGCCTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: RTCPRGARWPGR*AVGRVALCLCR
Trigger: TCGGCACAGGCACAGAGCCACCCTCCCAACGGCGCACCTGCCAGGCCACCGTGCCCCACGAGGACACGTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCTGGAAGCACACTTTGCACTTGTAGGAGGCCCGCCTaGCCTTGGCCGGCCGGCCTCTGCCTTGGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AGSTLCTCRRPA*PWPAGLCLGPS
Trigger: GGAGGGCCCAAGGCAGAGGCCGGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GCTCGCCCAGGCTGCGGAAGCGCTGGAAGCACACTTTaGACTTGTAGGAGGCCCGCCTGCCCTTGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ARPGCGSAGSTL*TCRRPACPWPA
Trigger: GGCCGGCCAAGGGCAGGCGGGCCTCCTACAAGTGCAAAGTGTGCTTCCAGCGCTTCCGCAGCCTGGGCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TTCCCGACGGCTTGGGGGTGCCGGTGTCATGTCTGCTaGGCGGCGGCTGCTCTGGTATCAGGAGACCGGGGC +
Preference number: 6 (lower is better)
Translates to: FPTAWGCRCHVC*AAAALVSGDRG
Trigger: GCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAAGCCGTCGGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGAGGCAGCTGCTGGTGGTGCTGTCCGCCGGAGAGCTaGAAGTCTCGGGAAAACCCAGGGGGCCCAAGGGGG +
Preference number: 6 (lower is better)
Translates to: GGSCWWCCPPES*KSRENPGGPRG
Trigger: CCCCCTTGGGCCCCCTGGGTTTTCCCGAGACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp ACTCCACCCTGGGTGTCTGGGTTGTCCGGGAGGCCCTaGAGGCAGCTGCTGGTGGTGCTGTCCGCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: TPPWVSGLSGRP*RQLLVVLSAGE
Trigger: CTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TCAGGAGTGGGGCCTTCAGGCCCCTGGACTCCACCCTaGGTGTCTGGGTTGTCCGGGAGGCCCTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: SGVGPSGPWTPP*VSGLSGRPWRQ
Trigger: CTGCCTCCAGGGCCTCCCGGACAACCCAGACACCCAGGGTGGAGTCCAGGGGCCTGAAGGCCCCACTCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CGTGGGGTCACCGCCCTCCTCAAAGCTGGGCTGGGTTaGCAGCGGGAGCACCGGCTTCTCACAGCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RGVTALLKAGLG*QREHRLLTALP
Trigger: GGGAAGCGCTGTGAGAAGCCGGTGCTCCCGCTGCCAACCCAGCCCAGCTTTGAGGAGGGCGGTGACCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTCGCCAAGCCGCTGGGACCATGTGCAGCTCAGGAATaGCCTCCGGCCGATCGTCCTCGGGGCAGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: LAKPLGPCAAQE*PPADRPRGSGR
Trigger: CCTCCCACTGCCCCGAGGACGATCGGCCGGAGGCCATTCCTGAGCTGCACATGGTCCCAGCGGCTTGGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTCCCGGCGGCCTTGCCGGCGGAGCGCTTGCCCCTGTaGTGTTTGGGCGCGGGTTCCGTGATGCTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: LPAALPAERLPL*CLGAGSVMLFR
Trigger: TCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGCCGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGTCCTTTGATGAGCTCTGGCAGCCCGCAGGCTTGGTaGCGCTGCCCTTGTGGAAGGCGCCTCGGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: CPLMSSGSPQAW*RCPCGRRLGAP
Trigger: GGGGGCCCCGAGGCGCCTTCCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCCAGAGCTCATCAAAGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CTGTGCACCGCCAGGTGGCGCTGCAGCTTGAAGGGCTaGGGGAAGCGCTTCCCGCAGTGGTGGCAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: LCTARWRCSLKG*GKRFPQWWQSR
Trigger: CCGCGACTGCCACCACTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCTGCAGCGCCACCTGGCGGTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TGCCCCCTGCGGGCGAAGCGGACCGCGTGCTCACGCAGGTGCTCGTaGTACATCCAGACGTCGGCCACCTCCTTCAGGCACATGCCGCAC +
Preference number: 6 (lower is better)
Translates to: CPLRAKRTACSRRCS*YIQTSATSFRHMPH
Trigger: GTGCGGCATGTGCCTGAAGGAGGTGGCCGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp TCAGCAGCACGTCCAGCTGGTCCAGGCTGGCGCTGCTaGGGGAGAAGTGGTGTGTGGGGTACGGAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SAARPAGPGWRC*GRSGVWGTEAA
Trigger: CGCCGCCTCCGTACCCCACACACCACTTCTCCCTCAGCAGCGCCAGCCTGGACCAGCTGGACGTGCTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTGGCTaGGCAAGCCCGCGTGTGCGTCGGCAGGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: GRPQLTGRSSRG*ASPRVRRQGLW
Trigger: CCAGAGTCCCTGCCGACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GCTGTGTGGGGACCCCGGTGCTCTGAGAACCTCCTTTaGGCCCTGGGCAGGCGGTGGCTGGGTGACGTGGCT +
Preference number: 6 (lower is better)
Translates to: AVWGPRCSENLL*ALGRRWLGDVA
Trigger: AGCCACGTCACCCAGCCACCGCCTGCCCAGGGCTCAAAGGAGGTTCTCAGAGCACCGGGGTCCCCACACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGTGCAGCTGCTGGCTGTGTGGGGACCCCGGTGCTCTaGGAACCTCCTTTGAGCCCTGGGCAGGCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GAAAGCVGTPVL*EPPLSPGQAVA
Trigger: AGCCACCGCCTGCCCAGGGCTCAAAGGAGGTTCTCAGAGCACCGGGGTCCCCACACAGCCAGCAGCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGGAGGGTGGCTCTGTGCCTGTGCCGAGCTCCACCCTaGCCACCGACTCAGCTTCTGCAAGCTCTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: GRVALCLCRAPP*PPTQLLQALSG
Trigger: CCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACAGGCACAGAGCCACCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGTACATCCAGACGTCGGCCACCTCCTTCAGGCACATaGCGCACGCCCAGGGCCCGGCCTTGCTCTGCGCGT +
Preference number: 6 (lower is better)
Translates to: CTSRRRPPPSGT*RTPRARPCSAR
Trigger: ACGCGCAGAGCAAGGCCGGGCCCTGGGCGTGCGGCATGTGCCTGAAGGAGGTGGCCGACGTCTGGATGTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CCCCTGCGGGCGAAGCGGACCGCGTGCTCACGCAGGTaGTCGTTGTACATCCAGACGTCGGCCACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PLRAKRTACSRR*SLYIQTSATSF
Trigger: GAAGGAGGTGGCCGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGTCAGGGGCACACCTGCCACGGGCACCCGGGGCCCTaGGTTTCCCTGAGAACACGAGAGGAGCCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: GQGHTCHGHPGP*VSLRTREEPSF
Trigger: GAAAGAGGGCTCCTCTCGTGTTCTCAGGGAAACGCAGGGCCCCGGGTGCCCGTGGCAGGTGTGCCCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CGCCGCCCCAGCCGCCGGTGGCGCCTGTTCTTCTGCTaGACGATCTTCAGAATGAGCTCCTTGCCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: RRPSRRWRLFFC*TIFRMSSLPQA
Trigger: CGCCTGGGGCAAGGAGCTCATTCTGAAGATCGTGCAGCAGAAGAACAGGCGCCACCGGCGGCTGGGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS GCA 72 bp GCCCGCCGCCCCAGCCGCCGGTGGCGCCTGTTCTTCTaGTGCACGATCTTCAGAATGAGCTCCTTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: ARRPSRRWRLFF*CTIFRMSSLPQ
Trigger: CTGGGGCAAGGAGCTCATTCTGAAGATCGTGCAGCAGAAGAACAGGCGCCACCGGCGGCTGGGGCGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS CCA 72 bp GCCTGGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTaGCTGAGCAAGCCCGCGTGTGCGTCGGCAGGGACT +
Preference number: 6 (lower is better)
Translates to: AWASPANRKVFA*LSKPACASAGT
Trigger: AGTCCCTGCCGACGCACACGCGGGCTTGCTCAGCCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGCCCCTCGGTGGGGCTGGTCTGCTGTGCCGGGCTCTaGGAGGAACCCTCCTCTCTGTTCACAGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GPSVGLVCCAGL*EEPSSLFTGKQ
Trigger: CTGCTTCCCTGTGAACAGAGAGGAGGGTTCCTCCCAGAGCCCGGCACAGCAGACCAGCCCCACCGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CAGTGGCTTGTTCAGGCCGGGGCTGGACGCCCTCTCTaGAGTCCGGCCCTCAGATCCACTTCGGCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: QWLVQAGAGRPL*SPALRSTSAVG
Trigger: GCCCACAGCCGAAGTGGATCTGAGGGCCGGACTCCAGAGAGGGCGTCCAGCCCCGGCCTGAACAAGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTTGGTAGCACCAGAGCGCCCGGTCTCAGGGGTCCCTaGGTCCTCCGGCTCCTTGCTGCTGGTCCCCATCTC +
Preference number: 6 (lower is better)
Translates to: LGSTRAPGLRGP*VLRLLAAGPHL
Trigger: GAGATGGGGACCAGCAGCAAGGAGCCGGAGGACCCAGGGACCCCTGAGACCGGGCGCTCTGGTGCTACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCTTGAAGGGCTTGGGGAAGCGCTTCCCGCAGTGGTaGCAGTCGCGGGAGGGGTCCTTGCAGGCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: SLKGLGKRFPQW*QSREGSLQASC
Trigger: GCACGAGGCCTGCAAGGACCCCTCCCGCGACTGCCACCACTGCGGGAAGCGCTTCCCCAAGCCCTTCAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCCTCTCTAGGGTCTCGGGCCATCCCTTGGTGGTGCTaGGAGCCACCTCCGAACACAGGTGGAGCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: ASLGSRAIPWWC*EPPPNTGGAGP
Trigger: CGGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GAGAACACGAGAGGAGCCCTCTTTCCCTCCGCATCTTaGCCTCTGGCTCCCGGCCGCGGCAGAGATGCCCCC +
Preference number: 6 (lower is better)
Translates to: ENTRGALFPSAS*PLAPGRGRDAP
Trigger: GGGGGCATCTCTGCCGCGGCCGGGAGCCAGAGGCCAAGATGCGGAGGGAAAGAGGGCTCCTCTCGTGTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp ACCTGTCCTTTGATGAGCTCTGGCAGCCCGCAGGCTTaGTGGCGCTGCCCTTGTGGAAGGCGCCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: TCPLMSSGSPQA*WRCPCGRRLGA
Trigger: GGCCCCGAGGCGCCTTCCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCCAGAGCTCATCAAAGGACAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGTCTCTGCCCGAAGAGCTGGCTGAGGAGGTCACTCTaGGCCTCGGCCGTCCGGTGGGTGTGTGGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: SLCPKSWLRRSL*ASAVRWVCGSA
Trigger: TGCCGAGCCACACACCCACCGGACGGCCGAGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGGGGAGTGGGCTGGACGGCCATCCTCAGCCCTCGATaGGCCCCAGGGAAGCCTGCGCTCATGGTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: WGVGWTAILSPR*APGKPALMVLS
Trigger: ACTCAGGACCATGAGCGCAGGCTTCCCTGGGGCCCATCGAGGGCTGAGGATGGCCGTCCAGCCCACTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS CAA 72 bp GAAGCACCTGTGGAAGCCAAGCTCTTCGGCGGCGGGTaGGGCCTCAGTCCTTGGGAGGCCCGGCCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: EAPVEAKLFGGG*GLSPWEARPEW
Trigger: CCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAGCTTGGCTTCCACAGGTGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GCGGCCTTGCCGGCGGAGCGCTTGCCCCTGTGGTGTTaGGGCGCGGGTTCCGTGATGCTGTTCAGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: AALPAERLPLWC*GAGSVMLFRRW
Trigger: CCACCTTCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCTCCGCCGGCAAGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GACCTGTCCTTTGATGAGCTCTGGCAGCCCGCAGGCTaGGTGGCGCTGCCCTTGTGGAAGGCGCCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: DLSFDELWQPAG*VALPLWKAPRG
Trigger: GCCCCGAGGCGCCTTCCACAAGGGCAGCGCCACCAAGCCTGCGGGCTGCCAGAGCTCATCAAAGGACAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TGGCTCCTGGAAGCACCTGTGGAAGCCAAGCTCTTCGGCGGCGGGTaGGGCCTCAGTCCTTGGGAGGCCCGGCCTGAGTGGAGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: WLLEAPVEAKLFGGG*GLSPWEARPEWSSS
Trigger: ACTGGAGCTCCACTCAGGCCGGGCCTCCCAAGGACTGAGGCCCAACCCGCCGCCGAAGAGCTTGGCTTCCACAGGTGCTTCCAGGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp AGGCTGAGGCCGGGGGCCCAGGGGTCAATGCCAGGCACCCTGCTATaGAGGAACCCATCCAGGAGGAAGGACTCGGGCAGACCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: RLRPGAQGSMPGTLL*RNPSRRKDSGRPAG
Trigger: TCCCGCAGGTCTGCCCGAGTCCTTCCTCCTGGATGGGTTCCTCAATAGCAGGGTGCCTGGCATTGACCCCTGGGCCCCCGGCCTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TGGGTCACGGGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTaGGTGGTGCTGGGAGCCACCTCCGAACACAGGTGGAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: WVTGSTGLSRVSGHP*VVLGATSEHRWSRA
Trigger: GGCCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCCCGTGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GCCTTCCGCTGCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTaGGGCTTGGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: AFRCSDGGGLGLFWL*GLGLVGSTRLGVAC
Trigger: GCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp AGGCCGCCAGGCTGCTGTAGTTGCGGTCACACTGCCTaGAGGTCAGCAGCACGTCCAGCTGGTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: RPPGCCSCGHTA*RSAARPAGPGW
Trigger: CCAGCCTGGACCAGCTGGACGTGCTGCTGACCTGCAGGCAGTGTGACCGCAACTACAGCAGCCTGGCGGCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CAGCCTGGCCCTCCCTGTGGCCGAGGCGGGCAGTATTaGTTGGAGAATACGAGGAGTGGCCCCTGGGCATCC +
Preference number: 6 (lower is better)
Translates to: QPGPPCGRGGQY*LENTRSGPWAS
Trigger: GGATGCCCAGGGGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGTTGTCCGGGAGGCCCTGGAGGCAGCTGCTGGTGGTaGTGTCCGCCGGAGAGCTGGAAGTCTCGGGAAAAC +
Preference number: 6 (lower is better)
Translates to: GCPGGPGGSCWW*CPPESWKSREN
Trigger: GTTTTCCCGAGACTTCCAGCTCTCCGGCGGACAGCACCACCAGCAGCTGCCTCCAGGGCCTCCCGGACAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CAGGCCTCTCTAGGGTCTCGGGCCATCCCTTGGTGGTaGTGGGAGCCACCTCCGAACACAGGTGGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: QASLGSRAIPWW*WEPPPNTGGAG
Trigger: CCCTGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGCAAAGGCAGGAGCTGCTGGCCGGCGGGGCATCCCTaGCTGAGGGCTTGGGGTGCAGTTCTTCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: GKGRSCWPAGHP*LRAWGAVLPGN
Trigger: GTTTCCTGGAAGAACTGCACCCCAAGCCCTCAGCCAGGGATGCCCCGCCGGCCAGCAGCTCCTGCCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GTGGTTGTCCGTGCCCCCTGGGCTCACCCCGTTCTCTaGCTGAAGCTGGTTGGCTGTGCCTTGGCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: VVVRAPWAHPVL*LKLVGCALALG
Trigger: ACCCAGGGCCAAGGCACAGCCAACCAGCTTCAGCCAGAGAACGGGGTGAGCCCAGGGGGCACGGACAACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCGTGGGAGGCTCAGTGGGCACAGCTGTGACAGCCTaGCCCTCCCTGTGGCCGAGGCGGGCAGTATTGCTT +
Preference number: 6 (lower is better)
Translates to: SVGGSVGTAVTA*PSLWPRRAVLL
Trigger: AAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGCTGTCACAGCTGTGCCCACTGAGCCTCCCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CGGGAAGCCCACCGTCACAGCGTTCTCTCTCCAGGCTaGGGGGCTCGGGGCTCACATCTCCGAGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: REAHRHSVLSPG*GARGSHLREKR
Trigger: CCTCTTCTCTCGGAGATGTGAGCCCCGAGCCCCCCAGCCTGGAGAGAGAACGCTGTGACGGTGGGCTTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCTCACCAGCTTCCCTTGGCCCCTTGGTGCAGCTCTTaGCTTGGGCTCGAGCGGGGAGCCTCTCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: AHQLPLAPWCSS*LGLERGASLVQ
Trigger: CTGCACCAGAGAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTGGGCTTaGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: AAWVCSGCWAWA*SGARGWELPAS
Trigger: GGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTaGGCTTGGGCTTGGTCGGGAGCACGCGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ALMVAAWVCSGC*AWAWSGARGWE
Trigger: CTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CGGGCGAAGCGGACCGCGTGCTCACGCAGGTGCTCGTaGTACATCCAGACGTCGGCCACCTCCTTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: RAKRTACSRRCS*YIQTSATSFRH
Trigger: GTGCCTGAAGGAGGTGGCCGACGTCTGGATGTACAACGAGCACCTGCGTGAGCACGCGGTCCGCTTCGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp ACCAGCTTCCCTTGGCCCCTTGGTGCAGCTCTTGGCTaGGGCTCGAGCGGGGAGCCTCTCTGGTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TSFPWPLGAALG*GSSGEPLWCRA
Trigger: AGCCCTGCACCAGAGAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTGGGCTaGGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GGLGLFWLLGLG*VGSTRLGVACF
Trigger: GAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTaGGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCC +
Preference number: 6 (lower is better)
Translates to: DGGGLGLFWLLG*GLVGSTRLGVA
Trigger: GGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTGGGCTaGGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTCCGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: SDGGGLGLFWLLGLG*VGSTRLGVACFRGV
Trigger: GACCCCTCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CGCTGCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTaGGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCCTGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: RCSDGGGLGLFWLLG*GLVGSTRLGVACFR
Trigger: TCGGAAGCAGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp AGCGCTTGCCCCTGTGGTGTTTGGGCGCGGGTTCCGTaGTGCTGTTCAGAAGGTGGGCGACAGCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SACPCGVWARVP*CCSEGGRQRCC
Trigger: GCAGCAGCGCTGTCGCCCACCTTCTGAACAGCATCACGGAACCCGCGCCCAAACACCACAGGGGCAAGCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp CCTCTGTGTGTGGCCCGGCTCTGCCTTCCGCTGCTCTaGTGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: PLCVARLCLPLL*WWRPGFVLAVG
Trigger: CCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCCGGGCCACACACAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGAGCTGGCTTTCCTCTGAGCTGGGGTTGGCTGGGCTaGTGGACATCGGCGACAGGGAAGAGCAGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: GAGFPLSWGWLG*WTSATGKSRCC
Trigger: GCAGCACCTGCTCTTCCCTGTCGCCGATGTCCAGCAGCCCAGCCAACCCCAGCTCAGAGGAAAGCCAGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TTGGGGGTGCCGGTGTCATGTCTGCTGGGCGGCGGCTaGTCTGGTATCAGGAGACCGGGGCTTGCTCCCATT +
Preference number: 6 (lower is better)
Translates to: LGVPVSCLLGGG*SGIRRPGLAPI
Trigger: AATGGGAGCAAGCCCCGGTCTCCTGATACCAGAGCAGCCGCCGCCCAGCAGACATGACACCGGCACCCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CACGGTGGCCACAGCCGATTCCGCACCCTCCCGATGTaGAGTGGATTCTCCAACGCGCGTGAGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: HGGHSRFRTLPM*SGFSNAREVSC
Trigger: GCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACATCGGGAGGGTGCGGAATCGGCTGTGGCCACCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTCCCCTGCACACAGAGCCTCCTGGTCAGTCTCCGCTaGACCCTCCATCACCCCAGGTCCCAGAGTGGCCAA +
Preference number: 6 (lower is better)
Translates to: LPCTQSLLVSLR*TLHHPRSQSGQ
Trigger: TTGGCCACTCTGGGACCTGGGGTGATGGAGGGTGCAGCGGAGACTGACCAGGAGGCTCTGTGTGCAGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GAGGAACCCATCCAGGAGGAAGGACTCGGGCAGACCTaGGGGATCCTCGTCCTCCCACGGGTCCTCATGGCA +
Preference number: 6 (lower is better)
Translates to: EEPIQEEGLGQT*GILVLPRVLMA
Trigger: TGCCATGAGGACCCGTGGGAGGACGAGGATCCCGCAGGTCTGCCCGAGTCCTTCCTCCTGGATGGGTTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TATTCTCAGCAGCGGGAGGCCAGGAGTCGGCCCCACTaGCCTGGTATTCGGGATAGGAACCGGGCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: YSQQREARSRPH*PGIRDRNRAGG
Trigger: CCCTCCAGCCCGGTTCCTATCCCGAATACCAGGCCAGTGGGGCCGACTCCTGGCCTCCCGCTGCTGAGAATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AAGCCTGTCCTCAGGGGGTCGTCTTTGCCCTCGGCCTaGGCGTCCCCAGCTAACAGGAAGGTCTTCGCGTGG +
Preference number: 6 (lower is better)
Translates to: KPVLRGSSLPSA*ASPANRKVFAW
Trigger: CCACGCGAAGACCTTCCTGTTAGCTGGGGACGCCCAGGCCGAGGGCAAAGACGACCCCCTGAGGACAGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCAACGCTACATCCACTCCCCTTCCCAGGCAAAGATaGGGCGGCGCCGGGAACCACTGTCCGTTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SNATSTPLPRQR*GGAGNHCPFRG
Trigger: CCCCCTGAACGGACAGTGGTTCCCGGCGCCGCCCCATCTTTGCCTGGGAAGGGGAGTGGATGTAGCGTTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTGGCCCTCCCTGTGGCCGAGGCGGGCAGTATTGCTTaGAGAATACGAGGAGTGGCCCCTGGGCATCCTGTC +
Preference number: 6 (lower is better)
Translates to: LALPVAEAGSIA*RIRGVAPGHPV
Trigger: GACAGGATGCCCAGGGGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCACAGAGAGGCAGTGGCTCGGAGAGGCTGCGTAACTaGCCATTGCAGGGGATGGTCTGGAGCCGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: PQRGSGSERLRN*PLQGMVWSRAH
Trigger: ATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACTGCCTCTCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGCACCTCAAAGTCCGTGGCACGGAGCGGCAGCAGGTaGGTGTTCCCGGGAAGCCCACCGTCACAGCGTTCT +
Preference number: 6 (lower is better)
Translates to: STSKSVARSGSR*VFPGSPPSQRS
Trigger: AGAACGCTGTGACGGTGGGCTTCCCGGGAACACCCACCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCTGTGAGCTCGCCGTGCCCTCGAAGTCTAAGAAGCTaGGGCCGGGGAGACCCACGGGGTCTTCAAAGGGTC +
Preference number: 6 (lower is better)
Translates to: PVSSPCPRSLRS*GRGDPRGLQRV
Trigger: GACCCTTTGAAGACCCCGTGGGTCTCCCCGGCCCCAGCTTCTTAGACTTCGAGGGCACGGCGAGCTCACAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp ATGGTGGCGGCCTGGGTTTGTTCTGGCTGTTGGGCTTaGGCTTGGTCGGGAGCACGCGGCTGGGAGTTGCCT +
Preference number: 6 (lower is better)
Translates to: MVAAWVCSGCWA*AWSGARGWELP
Trigger: AGGCAACTCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TTCCGCTGCTCTGATGGTGGCGGCCTGGGTTTGTTCTaGCTGTTGGGCTTGGGCTTGGTCGGGAGCACGCGG +
Preference number: 6 (lower is better)
Translates to: FRCSDGGGLGLF*LLGLGLVGSTR
Trigger: CCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCGGCTCTGCCTTCCGCTGCTCTGATGGTGGCGGCCTaGGTTTGTTCTGGCTGTTGGGCTTGGGCTTGGTCG +
Preference number: 6 (lower is better)
Translates to: PALPSAALMVAA*VCSGCWAWAWS
Trigger: CGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CTGTCCGGGGCTGACTCTTCGGCAGTTTCAGGCTCCTaGGCCTCCTGGGGAAAGTCCAGCGACGGGCGGGTT +
Preference number: 6 (lower is better)
Translates to: LSGADSSAVSGS*ASWGKSSDGRV
Trigger: AACCCGCCCGTCGCTGGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTGCCGAAGAGTCAGCCCCGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CCTGGCCCTCCCTGTGGCCGAGGCGGGCAGTATTGCTaGGAGAATACGAGGAGTGGCCCCTGGGCATCCTGT +
Preference number: 6 (lower is better)
Translates to: PGPPCGRGGQYC*ENTRSGPWASC
Trigger: ACAGGATGCCCAGGGGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp ACAGCCTGGCCCTCCCTGTGGCCGAGGCGGGCAGTATaGCTTGGAGAATACGAGGAGTGGCCCCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: TAWPSLWPRRAV*LGEYEEWPLGI
Trigger: GATGCCCAGGGGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CCGGGGGCCCAGGGGTCAATGCCAGGCACCCTGCTATaGAGGAACCCATCCAGGAGGAAGGACTCGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PGAQGSMPGTLL*RNPSRRKDSGR
Trigger: TCTGCCCGAGTCCTTCCTCCTGGATGGGTTCCTCAATAGCAGGGTGCCTGGCATTGACCCCTGGGCCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GGGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTaGGTGGTGCTGGGAGCCACCTCCGAACACAGGTGG +
Preference number: 6 (lower is better)
Translates to: GSTGLSRVSGHP*VVLGATSEHRW
Trigger: CCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TGCTCACCAGCTTCCCTTGGCCCCTTGGTGCAGCTCTaGGCTTGGGCTCGAGCGGGGAGCCTCTCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: CSPASLGPLVQL*AWARAGSLSGA
Trigger: TGCACCAGAGAGGCTCCCCGCTCGAGCCCAAGCCAAGAGCTGCACCAAGGGGCCAAGGGAAGCTGGTGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TGCTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTGTaGGGCTTGGGCTTGGTCGGGAGCACGCGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: CSDGGGLGLFWL*GLGLVGSTRLG
Trigger: TCCCAGCCGCGTGCTCCCGACCAAGCCCAAGCCCAACAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TTCTCTAGCAGGACTGCACCCTCGGTGGGGCCGGTCAGCGCTGTTTaGGGACTGGCATTGACTGAGGCGTGGTTGTCCGTGCCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FSSRTAPSVGPVSAV*GLALTEAWLSVPPG
Trigger: CCCAGGGGGCACGGACAACCACGCCTCAGTCAATGCCAGTCCCAAAACAGCGCTGACCGGCCCCACCGAGGGTGCAGTCCTGCTAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp ACAGCTGTGACAGCCTGGCCCTCCCTGTGGCCGAGGCGGGCAGTATaGCTTGGAGAATACGAGGAGTGGCCCCTGGGCATCCTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: TAVTAWPSLWPRRAV*LGEYEEWPLGILSG
Trigger: CCCTGACAGGATGCCCAGGGGCCACTCCTCGTATTCTCCAAGCAATACTGCCCGCCTCGGCCACAGGGAGGGCCAGGCTGTCACAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp TGGGGCCGGAAGGCTCCTCGTCCGCGAAGACGTCGATaGAGCTGCTGTCGATCTCCGGGTTGTCCGACTGGT +
Preference number: 6 (lower is better)
Translates to: WGRKAPRPRRRR*SCCRSPGCPTG
Trigger: ACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGACGTCTTCGCGGACGAGGAGCCTTCCGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GTCGAATCTGTCCACCGGCAGGTCTGGGAAGAGGGATaGGGACTCCAAGGTCGGTGGCGATGCAGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: VESVHRQVWEEG*GLQGRWRCSPA
Trigger: GGCAGGGCTGCATCGCCACCGACCTTGGAGTCCTCATCCCTCTTCCCAGACCTGCCGGTGGACAGATTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp CACCCTCCCGATGTGCAGTGGATTCTCCAACGCGCGTaGGGTCAGCTGCCGAGAACGTGTCCTCGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: HPPDVQWILQRA*GQLPRTCPRGA
Trigger: TGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACATCGGGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp AGGCGGTGGCTGGGTGACGTGGCTGGGGTCTCCCCGTaGGTGATTTGGTCTCTCCTTCCCAGACACCCTGTG +
Preference number: 6 (lower is better)
Translates to: RRWLGDVAGVSP*VIWSLLPRHPV
Trigger: CACAGGGTGTCTGGGAAGGAGAGACCAAATCACTCACGGGGAGACCCCAGCCACGTCACCCAGCCACCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp TCGGGGGCCCCTCAGCTGGGTCGCCGCACAACTTCCTaGGGAATGAGAATTTCTTGGCTCCGCTCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: SGAPQLGRRTTS*GMRISWLRSEA
Trigger: GGCCTCGGAGCGGAGCCAAGAAATTCTCATTCCTCAGGAAGTTGTGCGGCGACCCAGCTGAGGGGCCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565624.3
CDS GCA 72 bp AGCCCCAGGGTCTGTCATTCCGTTGTAGGTGAACAGTaGTGGGGAGCCGCCCTGGCTGCTTCTCACGGCTGG +
Preference number: 6 (lower is better)
Translates to: SPRVCHSVVGEQ*WGAALAASHGW
Trigger: CCAGCCGTGAGAAGCAGCCAGGGCGGCTCCCCAGCACTGTTCACCTACAACGGAATGACAGACCCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CGAACGGCAGACCGGAGTCCCTGTTCGCAGACAGGCTaGCATAGAGGGGTGGGTCGAATCTGTCCACCGGCA +
Preference number: 6 (lower is better)
Translates to: RTADRSPCSQTG*HRGVGRICPPA
Trigger: TGCCGGTGGACAGATTCGACCCACCCCTCTATGGCAGCCTGTCTGCGAACAGGGACTCCGGTCTGCCGTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGTGCCGAGCTCCACCCTGCCCACCGACTCAGCTTCTaGAAGCTCTCTCGGGGCCCCACGTGTGTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: CAELHPAHRLSF*KLSRGPTCVFA
Trigger: AGCAAAGACACACGTGGGGCCCCGAGAGAGCTTGCAGAAGCTGAGTCGGTGGGCAGGGTGGAGCTCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp ATGTGCAGTGGATTCTCCAACGCGCGTGAGGTCAGCTaGCGAGAACGTGTCCTCGTGGGGCACGGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: MCSGFSNAREVS*RERVLVGHGGL
Trigger: CAGGCCACCGTGCCCCACGAGGACACGTTCTCGGCAGCTGACCTCACGCGCGTTGGAGAATCCACTGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGGAGTCCGGCCCTCAGATCCACTTCGGCTGTGGGCTaGTGTCAAGGCCAGCGCCAGGGACTCCCTATTAGG +
Preference number: 6 (lower is better)
Translates to: WSPALRSTSAVG*CQGQRQGLPIR
Trigger: CCTAATAGGGAGTCCCTGGCGCTGGCCTTGACAGCAGCCCACAGCCGAAGTGGATCTGAGGGCCGGACTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CCCTCCTTCCACAGAGAGGCAGTGGCTCGGAGAGGCTaGGTAACTGGCCATTGCAGGGGATGGTCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: PSFHREAVARRG*VTGHCRGWSGA
Trigger: GGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACTGCCTCTCTGTGGAAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TCCTTCCTCTGTGTGTGGCCCGGCTCTGCCTTCCGCTaGTCTGATGGTGGCGGCCTGGGTTTGTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SFLCVWPGSAFR*SDGGGLGLFWL
Trigger: CAGCCAGAACAAACCCAGGCCGCCACCATCAGAGCAGCGGAAGGCAGAGCCGGGCCACACACAGAGGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGTCCGGGGCTGACTCTTCGGCAGTTTCAGGCTCCTTaGCCTCCTGGGGAAAGTCCAGCGACGGGCGGGTTT +
Preference number: 6 (lower is better)
Translates to: CPGLTLRQFQAP*PPGESPATGGF
Trigger: AAACCCGCCCGTCGCTGGACTTTCCCCAGGAGGCCAAGGAGCCTGAAACTGCCGAAGAGTCAGCCCCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AAAGAGGGGTACGGTGGATCTGACGGCACCGTCTTCTaGGGAGGGTCGGCACATGCGAACGGCAGACCGGAG +
Preference number: 6 (lower is better)
Translates to: KEGYGGSDGTVF*GGSAHANGRPE
Trigger: CTCCGGTCTGCCGTTCGCATGTGCCGACCCTCCCCAGAAGACGGTGCCGTCAGATCCACCGTACCCCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGGCAGCATGGCTGGGACTGGCACCAAAAGGCCAGGTaGCATCCAGAGGTGGAGCCCCGTCACCCTGAAATG +
Preference number: 6 (lower is better)
Translates to: GQHGWDWHQKAR*HPEVEPRHPEM
Trigger: CATTTCAGGGTGACGGGGCTCCACCTCTGGATGCCACCTGGCCTTTTGGTGCCAGTCCCAGCCATGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCTTCCAGACCTGAGGGGTTCACTCGTGGAGGGCTCTaGGCAGCAGGTGTCAGCTCCTGCAAGCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: PSRPEGFTRGGL*AAGVSSCKPRM
Trigger: CATCCTGGGCTTGCAGGAGCTGACACCTGCTGCCCAGAGCCCTCCACGAGTGAACCCCTCAGGTCTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GAGCCACCGGGGAATCCTCAGCCCCAGTATCTGTCGTaGCTTGGACGCCATCTGCCTCTTCCAGAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: EPPGNPQPQYLS*LGRHLPLPEVP
Trigger: GGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCCACGACAGATACTGGGGCTGAGGATTCCCCGGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTGGTaGTGCTGGGAGCCACCTCCGAACACAGGTGGAGCA +
Preference number: 6 (lower is better)
Translates to: LQASLGSRAIPW*CWEPPPNTGGA
Trigger: TGCTCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGTCTACAGGCCTCTCTAGGGTCTCGGGCCATCCCTTaGTGGTGCTGGGAGCCACCTCCGAACACAGGTGGA +
Preference number: 6 (lower is better)
Translates to: GLQASLGSRAIP*WCWEPPPNTGG
Trigger: TCCACCTGTGTTCGGAGGTGGCTCCCAGCACCACCAAGGGATGGCCCGAGACCCTAGAGAGGCCTGTAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGACAGAGACGGCGGGGGACACTCCTGGTGGTTGGATaGCAGCTCACAACCTCTGATCGGGTGGGTCACGGG +
Preference number: 6 (lower is better)
Translates to: RQRRRGTLLVVG*QLTTSDRVGHG
Trigger: CCCGTGACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCCCCCGCCGTCTCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp AGGACTGCACCCTCGGTGGGGCCGGTCAGCGCTGTTTaGGGACTGGCATTGACTGAGGCGTGGTTGTCCGTG +
Preference number: 6 (lower is better)
Translates to: RTAPSVGPVSAV*GLALTEAWLSV
Trigger: CACGGACAACCACGCCTCAGTCAATGCCAGTCCCAAAACAGCGCTGACCGGCCCCACCGAGGGTGCAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CACCGGGGAATCCTCAGCCCCAGTATCTGTCGTGGCTaGGACGCCATCTGCCTCTTCCAGAGGTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: HRGILSPSICRG*DAICLFQRCPG
Trigger: GCCTGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCCACGACAGATACTGGGGCTGAGGATTCCCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TGGTACTCCATGCCGTTGAGCGCCTCTGTGATGAGGCTGTCCAGCTaGGCGTCATCCTCCATGTCCAGGTCCGAGGCAGGGAGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: WYSMPLSASVMRLSS*ASSSMSRSEAGSGK
Trigger: CTTCCCGCTCCCTGCCTCGGACCTGGACATGGAGGATGACGCCAAGCTGGACAGCCTCATCACAGAGGCGCTCAACGGCATGGAGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GCTCGCTCCCAGACTCTTTGCACACACCCAACGCCTTGGTCTCTCTaGGTCCCCAGAACCCCCTTGCCGAGGCTCCCTTCTGCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: ARSQTLCTHPTPWSL*VPRTPLPRLPSAQL
Trigger: CAACTGGGCAGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp CCGCACAGGCGGCTGGAGGAGAACGCAAAGCCTCTGTaGATTCTGTGCTGTCCGGGGCTGACTCTTCGGCAG +
Preference number: 6 (lower is better)
Translates to: PHRRLEENAKPL*ILCCPGLTLRQ
Trigger: CTGCCGAAGAGTCAGCCCCGGACAGCACAGAATTCACAGAGGCTTTGCGTTCTCCTCCAGCCGCCTGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGTGGCTGGGTGACGTGGCTGGGGTCTCCCCGTGAGTaGTTTGGTCTCTCCTTCCCAGACACCCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: GGWVTWLGSPRE*FGLSFPDTLWL
Trigger: AAGCCACAGGGTGTCTGGGAAGGAGAGACCAAATCACTCACGGGGAGACCCCAGCCACGTCACCCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TTTCTCGGCTTGGCCAAGCAAGCCCCAATGTCCATCTaGCTCCAGCCCCAGCTGATGTCCGGCCACTGCAGG +
Preference number: 6 (lower is better)
Translates to: FLGLAKQAPMSI*LQPQLMSGHCR
Trigger: CCTGCAGTGGCCGGACATCAGCTGGGGCTGGAGGCAGATGGACATTGGGGCTTGCTTGGCCAAGCCGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTCAGCCCCAGTATCTGTCGTGGCTTGGACGCCATCTaGCTCTTCCAGAGGTGCCCAGGCAGGAGAACAGGC +
Preference number: 6 (lower is better)
Translates to: LSPSICRGLDAI*LFQRCPGRRTG
Trigger: GCCTGTTCTCCTGCCTGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCCACGACAGATACTGGGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp GGCTCCCTTCTGCCCAGTTGGCTGTTCCCCCAGAGCTaGACCATCCATCCTCCCTGGACACAGCATCCGATC +
Preference number: 6 (lower is better)
Translates to: GSLLPSWLFPQS*TIHPPWTQHPI
Trigger: GATCGGATGCTGTGTCCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAGCCAACTGGGCAGAAGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGCTGCTGTCCTCCGCAGGCTCGCTCCCAGACTCTTTaGACACACCCAACGCCTTGGTCTCTCTTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: CCCPPQARSQTL*THPTPWSLLVP
Trigger: GGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGAGCCTGCGGAGGACAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CCCCACCGCCTTCCTTGGGTGCACTGGGAACTTGAGTaGTTTGCTGGGGGTGGATGCTGCCGACCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: PHRLPWVHWELE*FAGGGCCRPVL
Trigger: AAGGACAGGTCGGCAGCATCCACCCCCAGCAAAGCACTCAAGTTCCCAGTGCACCCAAGGAAGGCGGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCTCCAGCTGTGGGTTCTCTGGTGTCTCGTCCAGGGTaGGCTTGGTCCTCGAGCTGGCGATGCCCAGAATGT +
Preference number: 6 (lower is better)
Translates to: PPAVGSLVSRPG*AWSSSWRCPEC
Trigger: ACATTCTGGGCATCGCCAGCTCGAGGACCAAGCCCACCCTGGACGAGACACCAGAGAACCCACAGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGAGTCCCTGTTCGCAGACAGGCTGCCATAGAGGGGTaGGTCGAATCTGTCCACCGGCAGGTCTGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GVPVRRQAAIEG*VESVHRQVWEE
Trigger: CTCTTCCCAGACCTGCCGGTGGACAGATTCGACCCACCCCTCTATGGCAGCCTGTCTGCGAACAGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp ACCGGGGAATCCTCAGCCCCAGTATCTGTCGTGGCTTaGACGCCATCTGCCTCTTCCAGAGGTGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: TGESSAPVSVVA*TPSASSRGAQA
Trigger: TGCCTGGGCACCTCTGGAAGAGGCAGATGGCGTCCAAGCCACGACAGATACTGGGGCTGAGGATTCCCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGAGGCTGCGCAGACCTCACAGGTCACAGGCCCATGTaGAGCTTGGCCCTTCCACTGGCCGTTCTCTGTAGA +
Preference number: 6 (lower is better)
Translates to: GGCADLTGHRPM*SLALPLAVLCR
Trigger: TCTACAGAGAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACCTGTGAGGTCTGCGCAGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGGCTGTTCCCCCAGAGCTGCACCATCCATCCTCCCTaGACACAGCATCCGATCTCCAGGTGGCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: WLFPQSCTIHPP*TQHPISRWLLG
Trigger: GCCCAGAAGCCACCTGGAGATCGGATGCTGTGTCCAGGGAGGATGGATGGTGCAGCTCTGGGGGAACAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGGATTTTGAAGCCAGTTAGTCTCTGCCCGAAGAGCTaGCTGAGGAGGTCACTCTGGGCCTCGGCCGTCCGG +
Preference number: 6 (lower is better)
Translates to: GILKPVSLCPKS*LRRSLWASAVR
Trigger: CCGGACGGCCGAGGCCCAGAGTGACCTCCTCAGCCAGCTCTTCGGGCAGAGACTAACTGGCTTCAAAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp ATGCCGTTGAGCGCCTCTGTGATGAGGCTGTCCAGCTaGGCGTCATCCTCCATGTCCAGGTCCGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: MPLSASVMRLSS*ASSSMSRSEAG
Trigger: CCCTGCCTCGGACCTGGACATGGAGGATGACGCCAAGCTGGACAGCCTCATCACAGAGGCGCTCAACGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CACCCCGTTCTCTGGCTGAAGCTGGTTGGCTGTGCCTaGGCCCTGGGTTTTCTCGGCTTGGCCAAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: HPVLWLKLVGCA*ALGFLGLAKQA
Trigger: GGCTTGCTTGGCCAAGCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCAGCTTCAGCCAGAGAACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp AGAGGCAGTGGCTCGGAGAGGCTGCGTAACTGGCCATaGCAGGGGATGGTCTGGAGCCGCGCCCATCTGAAA +
Preference number: 6 (lower is better)
Translates to: RGSGSERLRNWP*QGMVWSRAHLK
Trigger: TTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CTGCTGCTGTCCTCCGCAGGCTCGCTCCCAGACTCTTaGCACACACCCAACGCCTTGGTCTCTCTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: LLLSSAGSLPDS*HTPNALVSLGP
Trigger: GGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCTGGGAGCGAGCCTGCGGAGGACAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp AAGGGAGACAGAGACGGCGGGGGACACTCCTGGTGGTaGGATGGCAGCTCACAACCTCTGATCGGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: KGDRDGGGHSWW*DGSSQPLIGWV
Trigger: GACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTCCCCCGCCGTCTCTGTCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp AGGCTCCCCACCGCCTTCCTTGGGTGCACTGGGAACTTGAGTGCTTaGCTGGGGGTGGATGCTGCCGACCTGTCCTTTGATGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RLPTAFLGCTGNLSA*LGVDAADLSFDELW
Trigger: CCAGAGCTCATCAAAGGACAGGTCGGCAGCATCCACCCCCAGCAAAGCACTCAAGTTCCCAGTGCACCCAAGGAAGGCGGTGGGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGGGCTGATGGAAGGCAAACACCAGTGGCCCATTGGTaGATGCGTGCCCAGCCACATCCGCAGGGAAGGGTT +
Preference number: 6 (lower is better)
Translates to: GADGRQTPVAHW*MRAQPHPQGRV
Trigger: AACCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTGGCCCTGGGACCTGGCCCTTTTTCCTCTTCGTACTaGTCTCTCCCTTCTCCTTGGGACCTAGGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: LALGPGPFSSSY*SLPSPWDLGSR
Trigger: ACGGGAGCCTAGGTCCCAAGGAGAAGGGAGAGAGCAGTACGAAGAGGAAAAAGGGCCAGGTCCCAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TTCCGGGGTTTCTGTGGCTCATCCTCTCTGGGACCCTaGGTCAGCTCCACTTCCTTCCTCTTCTCGCCTCGG +
Preference number: 6 (lower is better)
Translates to: FRGFCGSSSLGP*VSSTSFLFSPR
Trigger: CCGAGGCGAGAAGAGGAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCACAGAAACCCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TCGCCGCCTTCCGGGGTTTCTGTGGCTCATCCTCTCTaGGACCCTGGGTCAGCTCCACTTCCTTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SPPSGVSVAHPL*DPGSAPLPSSS
Trigger: AGAAGAGGAAGGAAGTGGAGCTGACCCAGGGTCCCAGAGAGGATGAGCCACAGAAACCCCGGAAGGCGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCCTGGGGAGTCTGGTGGGAGGCATTTCTGTGGCTTTaGGGGGAGTCAGACTGGAAGTCACTGGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: PWGVWWEAFLWL*GESDWKSLAVL
Trigger: CAGCACAGCCAGTGACTTCCAGTCTGACTCCCCCCAAAGCCACAGAAATGCCTCCCACCAGACTCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TGGTGGTTGGATGGCAGCTCACAACCTCTGATCGGGTaGGTCACGGGGTCTACAGGCCTCTCTAGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: WWLDGSSQPLIG*VTGSTGLSRVS
Trigger: CGAGACCCTAGAGAGGCCTGTAGACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TCGATCTCCGGGTTGTCCGACTGGTACTCCATGCCGTaGAGCGCCTCTGTGATGAGGCTGTCCAGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SISGLSDWYSMP*SASVMRLSSLA
Trigger: CGCCAAGCTGGACAGCCTCATCACAGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CTGGTTGGCTGTGCCTTGGCCCTGGGTTTTCTCGGCTaGGCCAAGCAAGCCCCAATGTCCATCTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LVGCALALGFLG*AKQAPMSICLQ
Trigger: CTGGAGGCAGATGGACATTGGGGCTTGCTTGGCCAAGCCGAGAAAACCCAGGGCCAAGGCACAGCCAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp TGCGCAGACCTCACAGGTCACAGGCCCATGTGGAGCTaGGCCCTTCCACTGGCCGTTCTCTGTAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: CADLTGHRPMWS*ALPLAVLCRCR
Trigger: CCTGCATCTACAGAGAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACCTGTGAGGTCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp AAGCTGCTGTCGATCTCCGGGTTGTCCGACTGGTACTCCATGCCGTaGAGCGCCTCTGTGATGAGGCTGTCCAGCTTGGCGTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: KLLSISGLSDWYSMP*SASVMRLSSLASSS
Trigger: GGAGGATGACGCCAAGCTGGACAGCCTCATCACAGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp TCCTCGTCCGCGAAGACGTCGATGAAGCTGCTGTCGATCTCCGGGTaGTCCGACTGGTACTCCATGCCGTTGAGCGCCTCTGTGATGAGG +
Preference number: 6 (lower is better)
Translates to: SSSAKTSMKLLSISG*SDWYSMPLSASVMR
Trigger: CCTCATCACAGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGACGTCTTCGCGGACGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CTTCCACAGAGAGGCAGTGGCTCGGAGAGGCTGCGTAACTGGCCATaGCAGGGGATGGTCTGGAGCCGCGCCCATCTGAAATCACATCAG +
Preference number: 6 (lower is better)
Translates to: LPQRGSGSERLRNWP*QGMVWSRAHLKSHQ
Trigger: CTGATGTGATTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTCCGAGCCACTGCCTCTCTGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GACACTCCTGGTGGTTGGATGGCAGCTCACAACCTCTaGTCGGGTGGGTCACGGGGTCTACAGGCCTCTCTA +
Preference number: 6 (lower is better)
Translates to: DTPGGWMAAHNL*SGGSRGLQASL
Trigger: TAGAGAGGCCTGTAGACCCCGTGACCCACCCGATCAGAGGTTGTGAGCTGCCATCCAACCACCAGGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TCTGCCTGTTTGGGATGCAGCTCATCTTCCCTGGCCTaGTCTGGTCTGGGCTTGGAGGCCGGAGTCTTCACA +
Preference number: 6 (lower is better)
Translates to: SACLGCSSSSLA*SGLGLEAGVFT
Trigger: TGTGAAGACTCCGGCCTCCAAGCCCAGACCAGACCAGGCCAGGGAAGATGAGCTGCATCCCAAACAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AGACTCTTTGCACACACCCAACGCCTTGGTCTCTCTTaGTCCCCAGAACCCCCTTGCCGAGGCTCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: RLFAHTQRLGLS*SPEPPCRGSLL
Trigger: CAGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GCGAAGACGTCGATGAAGCTGCTGTCGATCTCCGGGTaGTCCGACTGGTACTCCATGCCGTTGAGCGCCTCT +
Preference number: 6 (lower is better)
Translates to: AKTSMKLLSISG*SDWYSMPLSAS
Trigger: AGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGACGTCTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CAGACTCTTTGCACACACCCAACGCCTTGGTCTCTCTaGGTCCCCAGAACCCCCTTGCCGAGGCTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: QTLCTHPTPWSL*VPRTPLPRLPS
Trigger: AGAAGGGAGCCTCGGCAAGGGGGTTCTGGGGACCAAGAGAGACCAAGGCGTTGGGTGTGTGCAAAGAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CTCCCCAGCCCATCCTGGGCTGAAGGTGGTCTTTCGGGAAGGATTTaGGTCAGGCTCTTGTGTAAACTGTCAGAGAAGGGTCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: LPSPSWAEGGLSGRI*VRLLCKLSEKGLGA
Trigger: GGCCCCGAGACCCTTCTCTGACAGTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAGACCACCTTCAGCCCAGGATGGGCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GAAGGAGGCTGCGCAGACCTCACAGGTCACAGGCCCATGTGGAGCTaGGCCCTTCCACTGGCCGTTCTCTGTAGATGCAGGCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: EGGCADLTGHRPMWS*ALPLAVLCRCRLLF
Trigger: AAAAAGAAGCCTGCATCTACAGAGAACGGCCAGTGGAAGGGCCAAGCTCCACATGGGCCTGTGACCTGTGAGGTCTGCGCAGCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp AGCTGGGAGAAAGAGACCTCATCATCAAACAAGCTTGGAGGATCCTaGGCACTGGAGCCAGAGGCATCAGGAGTGGGGCCTTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SWEKETSSSNKLGGS*ALEPEASGVGPSGP
Trigger: GGGGCCTGAAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GGGTCTTCAAAGGGTCCCAGAAAGCACAGGTCTTGCATCTCAAACTaGGTGCTGAGCACCTCAAAGTCCGTGGCACGGAGCGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GSSKGPRKHRSCISN*VLSTSKSVARSGSR
Trigger: CCTGCTGCCGCTCCGTGCCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTGGGACCCTTTGAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp GGGGAGACCCACGGGGTCTTCAAAGGGTCCCAGAAAGCACAGGTCTaGCATCTCAAACTTGGTGCTGAGCACCTCAAAGTCCGTGGCACG +
Preference number: 6 (lower is better)
Translates to: GETHGVFKGSQKAQV*HLKLGAEHLKVRGT
Trigger: CGTGCCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTGGGACCCTTTGAAGACCCCGTGGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp ACGCAAAGCCTCTGTGAATTCTGTGCTGTCCGGGGCTaGCTCTTCGGCAGTTTCAGGCTCCTTGGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: TQSLCEFCAVRG*LFGSFRLLGLL
Trigger: CAGGAGGCCAAGGAGCCTGAAACTGCCGAAGAGTCAGCCCCGGACAGCACAGAATTCACAGAGGCTTTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp TGGAAGGCAAACACCAGTGGCCCATTGGTGAATGCGTaGCCAGCCACATCCGCAGGGAAGGGTTTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: WKANTSGPLVNA*PATSAGKGFVL
Trigger: CAGCACAAAACCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp ACTCGTGGAGGGCTCTGGGCAGCAGGTGTCAGCTCCTaGAAGCCCAGGATGCCATCTTTACTCTTAGCCACT +
Preference number: 6 (lower is better)
Translates to: TRGGLWAAGVSS*KPRMPSLLLAT
Trigger: AGTGGCTAAGAGTAAAGATGGCATCCTGGGCTTGCAGGAGCTGACACCTGCTGCCCAGAGCCCTCCACGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp TCGATGAAGCTGCTGTCGATCTCCGGGTTGTCCGACTaGTACTCCATGCCGTTGAGCGCCTCTGTGATGAGG +
Preference number: 6 (lower is better)
Translates to: SMKLLSISGLSD*YSMPLSASVMR
Trigger: CCTCATCACAGAGGCGCTCAACGGCATGGAGTACCAGTCGGACAACCCGGAGATCGACAGCAGCTTCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GAGAGGCTGCGTAACTGGCCATTGCAGGGGATGGTCTaGAGCCGCGCCCATCTGAAATCACATCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: ERLRNWPLQGMV*SRAHLKSHQQR
Trigger: TCTCTGCTGATGTGATTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCCAGTTACGCAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CCTCATCATCAAACAAGCTTGGAGGATCCTTGGCACTaGAGCCAGAGGCATCAGGAGTGGGGCCTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: PHHQTSLEDPWH*SQRHQEWGLQA
Trigger: GGCCTGAAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GGTGCTTGTTCATGTGGCGGTCGAACTGCTCCTTCTTaGCGAAGGTGTAGTTGCAGGAGCTGCAGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: GACSCGGRTAPS*RRCSCRSCRRR
Trigger: CCTTCGCCTGCAGCTCCTGCAACTACACCTTCGCCAAGAAGGAGCAGTTCGACCGCCACATGAACAAGCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp ACCGCCTTCCTTGGGTGCACTGGGAACTTGAGTGCTTaGCTGGGGGTGGATGCTGCCGACCTGTCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: TAFLGCTGNLSA*LGVDAADLSFD
Trigger: ATCAAAGGACAGGTCGGCAGCATCCACCCCCAGCAAAGCACTCAAGTTCCCAGTGCACCCAAGGAAGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CTGGAGGGAAGAGCTGGGAGAAAGAGACCTCATCATCAAACAAGCTaGGAGGATCCTTGGCACTGGAGCCAGAGGCATCAGGAGTGGGGC +
Preference number: 6 (lower is better)
Translates to: LEGRAGRKRPHHQTS*EDPWHWSQRHQEWG
Trigger: GCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCTCTTCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp AGTCCAGTCTTGGAGGCTCCGGCTTTCTGCACTGGCTaGAAATGGAAGTTGGCTCCCCTGGGGCTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: SPVLEAPAFCTG*KWKLAPLGLKG
Trigger: TCCTTTCAGCCCCAGGGGAGCCAACTTCCATTTTCAGCCAGTGCAGAAAGCCGGAGCCTCCAAGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp GGCCATTGCAGGGGATGGTCTGGAGCCGCGCCCATCTaGAATCACATCAGCAGAGACTGGAAGAATGCTCTC +
Preference number: 6 (lower is better)
Translates to: GHCRGWSGAAPI*NHISRDWKNAL
Trigger: GAGAGCATTCTTCCAGTCTCTGCTGATGTGATTTCAGATGGGCGCGGCTCCAGACCATCCCCTGCAATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp CCAGAAAGCACAGGTCTTGCATCTCAAACTTGGTGCTaGGCACCTCAAAGTCCGTGGCACGGAGCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PESTGLASQTWC*APQSPWHGAAA
Trigger: TGCTGCCGCTCCGTGCCACGGACTTTGAGGTGCTCAGCACCAAGTTTGAGATGCAAGACCTGTGCTTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS GCA 72 bp CTGATGGAAGGCAAACACCAGTGGCCCATTGGTGAATaGGTGCCCAGCCACATCCGCAGGGAAGGGTTTTGT +
Preference number: 6 (lower is better)
Translates to: LMEGKHQWPIGE*VPSHIRREGFC
Trigger: ACAAAACCCTTCCCTGCGGATGTGGCTGGGCACGCATTCACCAATGGGCCACTGGTGTTTGCCTTCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp GCCTGCTGTCTCCTTCTGCCTGGCAAAGTCCAGTCTTaGAGGCTCCGGCTTTCTGCACTGGCTGAAAATGGA +
Preference number: 6 (lower is better)
Translates to: ACCLLLPGKVQS*RLRLSALAENG
Trigger: TCCATTTTCAGCCAGTGCAGAAAGCCGGAGCCTCCAAGACTGGACTTTGCCAGGCAGAAGGAGACAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp ATTCTTAAAGTGCTGTCTTTGGGGGTGTCCCCACTGTaGGTGCAGGTTACAGCACTGACGGAGCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: ILKVLSLGVSPL*VQVTALTEPGG
Trigger: GCCTCCTGGCTCCGTCAGTGCTGTAACCTGCACTCACAGTGGGGACACCCCCAAAGACAGCACTTTAAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CTGGCGGCCTCCTTATTCTTAGGAAATGAAAGTTCCTaGTCGGGGCTGCACTTTGCTAAACTCCCGGCATCC +
Preference number: 6 (lower is better)
Translates to: LAASLFLGNESS*SGLHFAKLPAS
Trigger: GGATGCCGGGAGTTTAGCAAAGTGCAGCCCCGACCAGGAACTTTCATTTCCTAAGAATAAGGAGGCCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp AAGAGACCTCATCATCAAACAAGCTTGGAGGATCCTTaGCACTGGAGCCAGAGGCATCAGGAGTGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: KRPHHQTSLEDP*HWSQRHQEWGL
Trigger: AAGGCCCCACTCCTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp GAAGGTGGTCTTTCGGGAAGGATTTTGGTCAGGCTCTaGTGTAAACTGTCAGAGAAGGGTCTCGGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: EGGLSGRILVRL*CKLSEKGLGAE
Trigger: CTCGGCCCCGAGACCCTTCTCTGACAGTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAGACCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp AGAGCTGGGAGAAAGAGACCTCATCATCAAACAAGCTaGGAGGATCCTTGGCACTGGAGCCAGAGGCATCAG +
Preference number: 6 (lower is better)
Translates to: RAGRKRPHHQTS*EDPWHWSQRHQ
Trigger: CTGATGCCTCTGGCTCCAGTGCCAAGGATCCTCCAAGCTTGTTTGATGATGAGGTCTCTTTCTCCCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CCA 72 bp CATCCTGGGCTGAAGGTGGTCTTTCGGGAAGGATTTTaGTCAGGCTCTTGTGTAAACTGTCAGAGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: HPGLKVVFREGF*SGSCVNCQRRV
Trigger: GACCCTTCTCTGACAGTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAGACCACCTTCAGCCCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 72 bp CCATCCTGGGCTGAAGGTGGTCTTTCGGGAAGGATTTaGGTCAGGCTCTTGTGTAAACTGTCAGAGAAGGGT +
Preference number: 6 (lower is better)
Translates to: PSWAEGGLSGRI*VRLLCKLSEKG
Trigger: ACCCTTCTCTGACAGTTTACACAAGAGCCTGACCAAAATCCTTCCCGAAAGACCACCTTCAGCCCAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS TCA 72 bp ACCAATTTCTGGATCTCCAGTTCATCCTCGGACAGGTaGCTCATAAGAGCAACGCTACATCCACTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TNFWISSSSSDR*LIRATLHPLPF
Trigger: GAAGGGGAGTGGATGTAGCGTTGCTCTTATGAGTCACCTGTCCGAGGATGAACTGGAGATCCAGAAATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3
CDS CAA 90 bp CTTGCTCCTAGAAATTACTCGGAAGCATCTTTCTTTAAAGGGATTTaGAAGCCAGTTAGTCTCTGCCCGAAGAGCTGGCTGAGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LAPRNYSEASFFKGI*KPVSLCPKSWLRRS
Trigger: TGACCTCCTCAGCCAGCTCTTCGGGCAGAGACTAACTGGCTTCAAAATCCCTTTAAAGAAAGATGCTTCCGAGTAATTTCTAGGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437464.1
ENST00000565624.3