Pregenerated sensors for ZNF461 (Homo sapiens)
Ensembl gene IDs: ENSG00000197808Ensembl transcript IDs: ENST00000360357.8, ENST00000396893.6, ENST00000540605.2, ENST00000588268.6, ENST00000588844.1, ENST00000590361.5, ENST00000591370.5, ENST00000591827.5, ENST00000592496.1, ENST00000592829.5
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTTCATAAAGGTGGGAGCCAAGGGGCCAGAGCAAATCAAAAGCTaGAAAGGCGCCAAGCTCTGGTCTCCACACTATTTATTGAGTACA | + |
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Preference number: 1 (lower is better) Translates to: EFIKVGAKGPEQIKS*KGAKLWSPHYLLST Trigger: TGTACTCAATAAATAGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCTTGGCTCCCACCTTTATGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR TCA 90 bp | TCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTATTTATTaGGTACAATCACTTAGATCTAAGAAGCAGATGTTCAGGGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: SKAAKAPSSGLHTIY*VQSLRSKKQMFRGE Trigger: TTCACCCCTGAACATCTGCTTCTTAGATCTAAGTGATTGTACTCAATAAATAGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR TCA 90 bp | TCTGCATTTATGTCTGTAGCCTCATTATTGTCCAAGAAATTATTGTaGAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SAFMSVASLLSKKLL*NPQVFHVPGHHLPV Trigger: GACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCTTGGACAATAATGAGGCTACAGACATAAATGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATGCAGTGAGCCAAGATTaGACCACTGGACTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: CSGAISAYCKIHLPGSRHAVSQD*TTGLQP Trigger: AGGCTGGAGTCCAGTGGTGCAATCTTGGCTCACTGC...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR GCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCGAGCAAATCAAAAGCTaGAAAGGCGCCAAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSEQIKS*KGAKLW Trigger: CCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTC...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTGCATCTGTGGAAAGTaGGTGGCTACAGAACTGGAT | + |
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Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSCICGK*VATELD Trigger: ATCCAGTTCTGTAGCCACTCACTTTCCACAGATGCA...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCCTGGTCATAGGAACGTaGTGGCAATTAGGAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSLVIGT*WQLGGF Trigger: AAAGCCTCCTAATTGCCATCACGTTCCTATGACCAG...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTCTGGGGCTCATCTCTaGATGCCAAGTCTGCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSSGAHL*MPSLHL Trigger: TAAATGCAGACTTGGCATCCAGAGATGAGCCCCAGA...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATGGGCTCATCTCTGGATaGCAAGTCTGCATTTATGTC | + |
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Preference number: 2 (lower is better) Translates to: CSGAISAYCKIHLPGSRHGLISG*QVCIYV Trigger: GACATAAATGCAGACTTGGCATCCAGAGATGAGCCC...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCCAGTTGTTGCATCTGTaGAAAGTGAGTGGCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSQLLHL*KVSGYR Trigger: TCTGTAGCCACTCACTTTCCACAGATGCAACAACTG...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCAGAAGCCAGCATATCTaGCCACATTCCAATGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSRSQHI*PHSNAS Trigger: TGAAGCATTGGAATGTGGCCAGATATGCTGGCTTCT...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTCTGTGGAAAGTGAGTaGCTACAGAACTGGATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSSVESE*LQNWML Trigger: TAACATCCAGTTCTGTAGCCACTCACTTTCCACAGA...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: CSGAISAYCKIHLPGSRHVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR CAA 90 bp | GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATaGTCCCATATTTTTATGGCCAGTTTATGCAGGCACTCCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: GGFPPQRPLVAFHNL*SHIFMASLCRHSTS Trigger: GCTTGTGGAGTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCATGTATAGTAAGATGTaGGCGATGCCTAAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSMYSKM*AMPKSL Trigger: AAGACTTTTAGGCATCGCTCACATCTTACTATACAT...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTGTCCCATATTTTTATaGCCAGTTTATGCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: CSGAISAYCKIHLPGSRHCPIFL*PVYAGT Trigger: AGTGCCTGCATAAACTGGCCATAAAAATATGGGACA...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGTTTGGAGATAACTTCTaGGGCTCATCTCTGGATGCC | + |
|
Preference number: 2 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMFGDNF*GSSLDA Trigger: GGCATCCAGAGATGAGCCCCAGAAGTTATCTCCAAA...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR TCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAAGGAGGAGAGGAAACCTaGCTGGCTTCTCGCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: ARYSLIPLLGICTIETKEGGEET*LASRQY Trigger: ATACTGGCGAGAAGCCAGTCAGGTTTCCTCTCCTCC...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAAGAGAGGAAACCTGACTaGCTTCTCGCCAGTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: ARYSLIPLLGICTIETKEERKPD*LLASMK Trigger: CTTCATACTGGCGAGAAGCCAGTCAGGTTTCCTCTC...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR GCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAATTTATGGCCAGTTTATaGAGGCACTCCACAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ARYSLIPLLGICTIETKEFMASL*RHSTSP Trigger: AGGGCTTGTGGAGTGCCTGCATAAACTGGCCATAAA...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTCTGGCCACATTCCAATaGTTCAAAGGAGTGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SVVGNGPKYGHTFHSRNILATFQ*FKGVSF Trigger: GAAAGACACTCCTTTGAAGCATTGGAATGTGGCCAG...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR TCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| 3UTR TCA 72 bp | GATAAGAGAGCAGGTCACACTCTGGTCATAGGAACGTaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: DKRAGHTLVIGT*WQLGGFPPQRP Trigger: AGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCACGTTCCTATGACCAGAGTGTGACCTGCTCTCTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTTAATCCCACTGTaGGGAATCTGCACAATAGAA | + |
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Preference number: 3 (lower is better) Translates to: CSGAISAYCKIHLPGSRHSLIPL*GICTIE Trigger: TTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGA...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGGGTTATCTCAGAGATTaGAGGGAAGGGAGGAAATTG | + |
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Preference number: 3 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMGYLRD*REGRKL Trigger: CAATTTCCTCCCTTCCCTCAAATCTCTGAGATAACC...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACGGTTATCTCAGAGATTaGAGGGAAGGGAGGAAATTG | + |
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Preference number: 3 (lower is better) Translates to: VAFHNLLSHIFMASLCRHGYLRD*REGRKL Trigger: CAATTTCCTCCCTTCCCTCAAATCTCTGAGATAACC...GTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACACTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTLSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| 3UTR TCA 72 bp | AAGGAAACTGATAGCAGTTGTTGCATCTGTGGAAAGTaGGTGGCTACAGAACTGGATGTTAGGGGAGAATTA | + |
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Preference number: 3 (lower is better) Translates to: KETDSSCCICGK*VATELDVRGEL Trigger: TAATTCTCCCCTAACATCCAGTTCTGTAGCCACTCACTTTCCACAGATGCAACAACTGCTATCAGTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR GCA 72 bp | CACAACTTATTGTCCCATATTTTTATGGCCAGTTTATaGAGGCACTCCACAAGCCCTTTTCCCAACAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: HNLLSHIFMASL*RHSTSPFPNSS Trigger: AGAACTGTTGGGAAAAGGGCTTGTGGAGTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR CCA 72 bp | TTGTGGCTTTCCACAACTTATTGTCCCATATTTTTATaGCCAGTTTATGCAGGCACTCCACAAGCCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: LWLSTTYCPIFL*PVYAGTPQALF Trigger: GAAAAGGGCTTGTGGAGTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGAACCTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATCTCTTGTCCCTGATGTaGCTCAAAATGACAGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SEPYKEWVTSLRTDLEKYLLSLM*LKMTVA Trigger: GGCAACTGTCATTTTGAGCAACATCAGGGACAAGAG...ATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAGGTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACTGTGTACAGGTTGTTaGAGCATAAAGGAAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: CGFPQLIVPYFYGQFMQALCTGC*SIKEEE Trigger: TTCTTCTTCCTTTATGCTCAAACAACCTGTACACAG...TGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAACTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: ARYSLIPLLGICTIETKELSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR TCA 72 bp | GGGGGCAATGGCAGTTTAGGTACATTTTCTTTGTGCTaGAGCAGCATAAACTTAACTACTGATTTATTCTTT | + |
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Preference number: 3 (lower is better) Translates to: GGNGSLGTFSLC*SSINLTTDLFF Trigger: AAAGAATAAATCAGTAGTTAAGTTTATGCTGCTTCAGCACAAAGAAAATGTACCTAAACTGCCATTGCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCTGTGTACAGGTTGTTaGAGCATAAAGGAAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDLCTGC*SIKEEE Trigger: TTCTTCTTCCTTTATGCTCAAACAACCTGTACACAG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTCTGTGTACAGGTTGTTaGAGCATAAAGGAAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: SVVGNGPKYGHTFHSRNILCTGC*SIKEEE Trigger: TTCTTCTTCCTTTATGCTCAAACAACCTGTACACAG...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDLSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTGCTTTCCACAACTTATaGTCCCATATTTTTATGGCC | + |
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Preference number: 3 (lower is better) Translates to: SVVGNGPKYGHTFHSRNIAFHNL*SHIFMA Trigger: GGCCATAAAAATATGGGACAATAAGTTGTGGAAAGC...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| CDS-3UTR GCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCTTGCCCACGCTGGAGTaGAGTGGCGCGATCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASLPTLE*SGAISA Trigger: AGCTGAGATCGCGCCACTGCACTCCAGCGTGGGCAA...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCCACGCTGGAGTGCAGTaGCGCGATCTCAGCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSHAGVQ*RDLSLL Trigger: CAGTAAGCTGAGATCGCGCCACTGCACTCCAGCGTG...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCTGTGTTGCCCACGCTaGAGTGCAGTGGCGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASLCCPR*SAVARS Trigger: AGATCGCGCCACTGCACTCCAGCGTGGGCAACACAG...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR GCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCCGGGACATCCTTACCTaGCTCTACCCGGAGACCATT | + |
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Preference number: 4 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSRDILT*LYPETI Trigger: AATGGTCTCCGGGTAGAGGCAGGTAAGGATGTCCCG...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CCA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCGAGAGGAAACCTGACTaGCTTCTCGCCAGTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSERKPD*LLASMK Trigger: CTTCATACTGGCGAGAAGCCAGTCAGGTTTCCTCTC...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR GCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGCCCGGAGACCATTCCTaGGAGGCTCCTACCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMPGDHS*EAPTGS Trigger: ACTTCCGGTAGGAGCCTCGCAGGAATGGTCTCCGGG...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360357.8 ENST00000588268.6 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTGAGAGGAAACCTGACTaGCTTCTCGCCAGTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTERKPD*LLASMK Trigger: CTTCATACTGGCGAGAAGCCAGTCAGGTTTCCTCTC...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCGGAGAATTTTTAACCTaGGTGGCGGAGGTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASGEFLT*VAEVAV Trigger: CACTGCAACCTCCGCCACCCAGGTTAAAAATTCTCC...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCTGGTCATAGGAACGTaGTGGCAATTAGGAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASLVIGT*WQLGGF Trigger: AAAGCCTCCTAATTGCCATCACGTTCCTATGACCAG...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCGGGCTCATCTCTGGATaGCAAGTCTGCATTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASGLISG*QVCIYV Trigger: GACATAAATGCAGACTTGGCATCCAGAGATGAGCCC...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATTGCCCACGCTGGAGTaGAGTGGCGCGATCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTLPTLE*SGAISA Trigger: AGCTGAGATCGCGCCACTGCACTCCAGCGTGGGCAA...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGGCGCGATCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTTTATGGCCAGTTTATaGAGGCACTCCACAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSGAISAYCKIHLPGSRHFMASL*RHSTSP Trigger: AGGGCTTGTGGAGTGCCTGCATAAACTGGCCATAAA...ATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGATCGCGCCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGTCTGGGGCTCATCTCTaGATGCCAAGTCTGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMSGAHL*MPSLGT Trigger: GGTGCCCAGACTTGGCATCCAGAGATGAGCCCCAGA...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360357.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTTTTGGAGATAACTTCTaGGGCTCATCTCTGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTFGDNF*GSSLDA Trigger: GGCATCCAGAGATGAGCCCCAGAAGTTATCTCCAAA...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTAGTTTTCCATGTACCTaGGCACCATCTTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTSFPCT*APSSCL Trigger: GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACT...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCTCTGGGGCTCATCTCTaGATGCCAAGTCTGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: AYCKIHLPGSRHSSASASSGAHL*MPSLHL Trigger: TAAATGCAGACTTGGCATCCAGAGATGAGCCCCAGA...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGGGGCTCATCTCTGGATaGCAAGTCTGGGCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMGLISG*QVWAPS Trigger: AGATGGTGCCCAGACTTGGCATCCAGAGATGAGCCC...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360357.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGAGCCAAGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGTGTCCCATATTTTTATaGCCAGTTTATGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GGSQGARANQKLQRRQALCPIFL*PVYAGT Trigger: AGTGCCTGCATAAACTGGCCATAAAAATATGGGACA...CAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCTTGGCTCCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTAGAAGCCAGCATATCTaGCCACATTCCAATGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTRSQHI*PHSNAS Trigger: TGAAGCATTGGAATGTGGCCAGATATGCTGGCTTCT...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGCTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMLWSKL*FGFQAK Trigger: CTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAG...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAGGAGGAGAGGAAACCTaGCTGGCTTCTCGCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTGGEET*LASRQY Trigger: ATACTGGCGAGAAGCCAGTCAGGTTTCCTCTCCTCC...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGAGCTACTCAGGAGGCTaGGGCAGGAGAATTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLTARSISQVHAILLPQSYSGG*GRRIFN Trigger: GTTAAAAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...CTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | GAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCCCGGAGACCATTCCTaGGAGGCTCCTACCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIIVKSPSFPCTWAPSSCPGDHS*EAPTGS Trigger: ACTTCCGGTAGGAGCCTCGCAGGAATGGTCTCCGGG...ACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588844.1 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGGGGCTCATCTCTGGATaGCAAGTCTGCATTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLTARSISQVHAILLPQGLISG*QVCIYV Trigger: GACATAAATGCAGACTTGGCATCCAGAGATGAGCCC...CTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAGCAGTGAGCCAAGATTaGACCACTGGACTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTAVSQD*TTGLQP Trigger: AGGCTGGAGTCCAGTGGTGCAATCTTGGCTCACTGC...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | ATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCCTGGGTGGCGGAGGTTaGAGTGAGCCAAGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIVKSPSFPCTWAPSSCLLGGGG*SEPRLH Trigger: GTGCAATCTTGGCTCACTGCAACCTCCGCCACCCAG...GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACACTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTLWSKL*FGFQAK Trigger: CTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAG...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGGAGCAAATCAAAAGCTaGAAAGGCGCCAAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMEQIKS*KGAKLW Trigger: CCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTC...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATCTGGATGCCAAGTCTaGGCACCATCTTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTSGCQV*APSSCL Trigger: GAGACAGGAAGATGGTGCCCAGACTTGGCATCCAGA...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360357.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCAGTTGTTGCATCTGTaGAAAGTGAGTGGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLTARSISQVHAILLPQQLLHL*KVSGYR Trigger: TCTGTAGCCACTCACTTTCCACAGATGCAACAACTG...CTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | ATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCCTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIVKSPSFPCTWAPSSCLLWSKL*FGFQAK Trigger: CTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAG...GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588844.1 |
||
| CDS-3UTR GCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAACCCGGAGACCATTCCTaGGAGGCTCCTACCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARYSLIPLLGICTIETKEPGDHS*EAPTGS Trigger: ACTTCCGGTAGGAGCCTCGCAGGAATGGTCTCCGGG...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGAGTTTTCCATGTACCTaGGCACCATCTTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMSFPCT*APSSCL Trigger: GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACT...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAGGAGAATTTTTAACCTaGGTGGCGGAGGTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTGEFLT*VAEVAV Trigger: CACTGCAACCTCCGCCACCCAGGTTAAAAATTCTCC...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAACTGTGTTGCCCACGCTaGAGTGCAGTGGCGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ARYSLIPLLGICTIETKELCCPR*SAVARS Trigger: AGATCGCGCCACTGCACTCCAGCGTGGGCAACACAG...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | AATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCCGAGATCACGCCATTaGACTCTAGCCTCCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NYCEIPKFSMYLGTIFLSPRSRH*TLASLY Trigger: GTACAAGGAGGCTAGAGTGCAATGGCGTGATCTCGG...AGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588844.1 |
||
| CDS-3UTR GCA 90 bp | AGAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGCTGAGGCAGGAGAATTaGTTGAAGCTGGGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNYCEIPKFSMYLGTIFLLRQEN*LKLGGR Trigger: TCTGCCTCCCAGCTTCAAGCAATTCTCCTGCCTCAG...CAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588844.1 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATCTGGGGCTCATCTCTaGATGCCAAGTCTGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTSGAHL*MPSLHL Trigger: TAAATGCAGACTTGGCATCCAGAGATGAGCCCCAGA...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | ATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCTTTGGAGATAACTTCTaGGGCTCATCTCTGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIVKSPSFPCTWAPSSCLFGDNF*GSSLDA Trigger: GGCATCCAGAGATGAGCCCCAGAAGTTATCTCCAAA...GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCAATCAGAGAGCAGCTGTaGGGAGTGGGCCTAACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGFPQLIVPYFYGQFMQAIREQL*GVGLTR Trigger: TCTAGTTAGGCCCACTCCCCACAGCTGCTCTCTGAT...TGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTTGCATCTGTGGAAAGTaGGTGGCTACAGAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYCEIPKFSMYLGTIFLSCICGK*VATELD Trigger: ATCCAGTTCTGTAGCCACTCACTTTCCACAGATGCA...AGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACTGCATCTGTGGAAAGTaGGTGGCTACAGAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAFHNLLSHIFMASLCRHCICGK*VATELD Trigger: ATCCAGTTCTGTAGCCACTCACTTTCCACAGATGCA...GTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACAGCTACTCAGGAGGCTaGGGCAGGAGAATTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAFHNLLSHIFMASLCRHSYSGG*GRRIFN Trigger: GTTAAAAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...GTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTCTGGGTGGCGGAGGTTaGAGTGAGCCAAGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVVGNGPKYGHTFHSRNILGGGG*SEPRLH Trigger: GTGCAATCTTGGCTCACTGCAACCTCCGCCACCCAG...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACACTTCTTCGTTCCCTCTaGAAGAAACTCAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTLLRSL*KKLNPK Trigger: CTTTGGATTGAGTTTCTTCCAGAGGGAACGAAGAAG...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTAGTTTTCCATGTACCTaGGCACCATCTTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIIVKSPSFPCTWAPSSCSFPCT*APSSCL Trigger: GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACT...ACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588844.1 |
||
| 3UTR CAA 72 bp | GCCACATTCCAATGCTTCAAAGGAGTGTCTTTCTCCTaGAGCACAGTGTTTATAGATAAGAGAGCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATFQCFKGVSFS*STVFIDKRAGH Trigger: GTGACCTGCTCTCTTATCTATAAACACTGTGCTCAAGGAGAAAGACACTCCTTTGAAGCATTGGAATGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTGGAGGAGAGGAAACCTaGCTGGCTTCTCGCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVVGNGPKYGHTFHSRNIGGEET*LASRQY Trigger: ATACTGGCGAGAAGCCAGTCAGGTTTCCTCTCCTCC...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR GCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCGGGACATCCTTACCTaGCTCTACCCGGAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDRDILT*LYPETI Trigger: AATGGTCTCCGGGTAGAGGCAGGTAAGGATGTCCCG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | ATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCCTTCTTCGTTCCCTCTaGAAGAAACTCAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIVKSPSFPCTWAPSSCLLLRSL*KKLNPK Trigger: CTTTGGATTGAGTTTCTTCCAGAGGGAACGAAGAAG...GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588844.1 |
||
| CDS-3UTR TCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDLWSKL*FGFQAK Trigger: CTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAAACAGAAAGTCCAAGTaGCACCAAGTTGCTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTNRKSK*HQVAII Trigger: AATTATAGCAACTTGGTGTCACTTGGACTTTCTGTT...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360357.8 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAATGTATAGTAAGATGTaGGCGATGCCTAAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTMYSKM*AMPKSL Trigger: AAGACTTTTAGGCATCGCTCACATCTTACTATACAT...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | AGAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNYCEIPKFSMYLGTIFLVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...CAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CCA 90 bp | AGAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGCTTCTTCGTTCCCTCTaGAAGAAACTCAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNYCEIPKFSMYLGTIFLLLRSL*KKLNPK Trigger: CTTTGGATTGAGTTTCTTCCAGAGGGAACGAAGAAG...CAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588844.1 |
||
| CDS-3UTR CCA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGGTGAGTAAAGTATGTTaGCTAAAAATGGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMVSKVC*LKMGMF Trigger: AAACATGCCCATTTTTAGCCAACATACTTTACTCAC...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACTCTGTGGAAAGTGAGTaGCTACAGAACTGGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAFHNLLSHIFMASLCRHSVESE*LQNWML Trigger: TAACATCCAGTTCTGTAGCCACTCACTTTCCACAGA...GTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATGAGAGGAAACCTGACTaGCTTCTCGCCAGTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDERKPD*LLASMK Trigger: CTTCATACTGGCGAGAAGCCAGTCAGGTTTCCTCTC...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAAGTTATCTCAGAGATTTaGGGGAAGGGAGGAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARYSLIPLLGICTIETKEVISEI*GKGGNC Trigger: ACAATTTCCTCCCTTCCCTCAAATCTCTGAGATAAC...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATTTTGGAGATAACTTCTaGGGCTCATCTCTGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDFGDNF*GSSLDA Trigger: GGCATCCAGAGATGAGCCCCAGAAGTTATCTCCAAA...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | ATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCGTGAGTAAAGTATGTTaGCTAAAAATGGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIVKSPSFPCTWAPSSCLVSKVC*LKMGMF Trigger: AAACATGCCCATTTTTAGCCAACATACTTTACTCAC...GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CCA 90 bp | GAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTGAAGTAGGCCAAATGTaGACTAATAATGAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: EIIVKSPSFPCTWAPSSCEVGQM*TNNENV Trigger: CACATTCTCATTATTAGTCCACATTTGGCCTACTTC...ACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCAGTTGTTGCATCTGTaGAAAGTGAGTGGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDQLLHL*KVSGYR Trigger: TCTGTAGCCACTCACTTTCCACAGATGCAACAACTG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCAGAAGTAGGCCAAATGTaGACTAATAATGAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGFPQLIVPYFYGQFMQAEVGQM*TNNENV Trigger: CACATTCTCATTATTAGTCCACATTTGGCCTACTTC...TGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCTTCTTCGTTCCCTCTaGAAGAAACTCAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDLLRSL*KKLNPK Trigger: CTTTGGATTGAGTTTCTTCCAGAGGGAACGAAGAAG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTTCTGTGGAAAGTGAGTaGCTACAGAACTGGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVVGNGPKYGHTFHSRNISVESE*LQNWML Trigger: TAACATCCAGTTCTGTAGCCACTCACTTTCCACAGA...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAAGTGAGTAAAGTATGTTaGCTAAAAATGGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARYSLIPLLGICTIETKEVSKVC*LKMGMF Trigger: AAACATGCCCATTTTTAGCCAACATACTTTACTCAC...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR TCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATATGTATAGTAAGATGTaGGCGATGCCTAAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDMYSKM*AMPKSL Trigger: AAGACTTTTAGGCATCGCTCACATCTTACTATACAT...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATAACATCACCAACTCATaGGCCATGTCTTATTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDNITNS*AMSYFR Trigger: TCTAAAATAAGACATGGCCCATGAGTTGGTGATGTT...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS TCA 90 bp | AAGGTGTTGCTTCAGCATTCTCAGGGAAGGCTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAGCCACACGCCCAGCTCTTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVLLQHSQGRLWSKL*FGFQAKPHAQLFLL Trigger: GAGAAGGAAGAGCTGGGCGTGTGGCTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAGCCTTCCCTGAGAATGCTGAAGCAACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 ENST00000588844.1 ENST00000590361.5 ENST00000591370.5 ENST00000591827.5 ENST00000592496.1 ENST00000592829.5 |
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| CDS-3UTR CAA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCAATCCAAAGAAGGTGTaGCTTCAGCATTCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSNPKKV*LQHSQG Trigger: TCCCTGAGAATGCTGAAGCAACACCTTCTTTGGATT...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAGCCAAGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGAAAATAACCCTCCTCTaGTCCCTGATGTTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGSQGARANQKLQRRQALKITLL*SLMLLK Trigger: TTTGAGCAACATCAGGGACAAGAGGAGGGTTATTTT...CAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCTTGGCTCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTAAACGCCTTCCCGCATaGATAAGGTTTCTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTKRLPA*IRFLSR Trigger: TCTGGAAAGAAACCTTATCAATGCGGGAAGGCGTTT...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| CDS-3UTR CAA 90 bp | AGGGGCCAGAGCAAATCAAAAGCTGCAAAGGCGCCAAGCTCTGGTCTCCACACTGGTTATCTCAGAGATTaGAGGGAAGGGAGGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQSKSKAAKAPSSGLHTGYLRD*REGRKL Trigger: CAATTTCCTCCCTTCCCTCAAATCTCTGAGATAACC...AGTGTGGAGACCAGAGCTTGGCGCCTTTGCAGCTTTTGATTTGCTCTGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588268.6 |
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| CDS-3UTR CAA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTCTTTAATCCCACTGTaGGGAATCTGCACAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSSLIPL*GICTIE Trigger: TTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGA...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | CAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCGCTTTCCACAACTTATaGTCCCATATTTTTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDPSPRFTPFFCLSLPSSAFHNL*SHIFMA Trigger: GGCCATAAAAATATGGGACAATAAGTTGTGGAAAGC...GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGAATCCAAAGAAGGTGTaGCTTCAGCATTCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQLTARSISQVHAILLPQNPKKV*LQHSQG Trigger: TCCCTGAGAATGCTGAAGCAACACCTTCTTTGGATT...CTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | GCTTACTGCAAGATCCATCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCCTGTGTACAGGTTGTTaGAGCATAAAGGAAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AYCKIHLPGSRHSSASASLCTGC*SIKEEE Trigger: TTCTTCTTCCTTTATGCTCAAACAACCTGTACACAG...GGAGGCTGAGGCAGAAGAATGGCGTGAACCTGGGAGATGGATCTTGCAGTAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTGCCGAGATCACGCCATaGCACTCTAGCCTCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NYCEIPKFSMYLGTIFLSAEITP*HSSLLV Trigger: TACAAGGAGGCTAGAGTGCAATGGCGTGATCTCGGC...AGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588844.1 |
||
| CDS-3UTR CAA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGAATCCAAAGAAGGTGTaGCTTCAGCATTCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMNPKKV*LQHSQG Trigger: TCCCTGAGAATGCTGAAGCAACACCTTCTTTGGATT...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGAACAGAAAGTCCTCCTaGTACAAATTCCTCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMNRKSS*YKFLCA Trigger: AGCGCAGAGGAATTTGTACAAGGAGGACTTTCTGTT...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTTGCACTCTAGCCTCCTaGTACAAATTCCTCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NYCEIPKFSMYLGTIFLSCTLAS*YKFLCA Trigger: AGCGCAGAGGAATTTGTACAAGGAGGCTAGAGTGCA...AGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588844.1 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACAAAAATAACCCTCCTCTaGTCCCTGATGTTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDKTLSNVCMGVKAPPNTKITLL*SLMLLK Trigger: TTTGAGCAACATCAGGGACAAGAGGAGGGTTATTTT...TGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGCTGTGTACAGGTTGTTaGAGCATAAAGGAAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMLCTGC*SIKEEE Trigger: TTCTTCTTCCTTTATGCTCAAACAACCTGTACACAG...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | GGACAAGACGCTGTCAAATGTCTGTATGGGGGTAAAAGCTCCTCCAAACACATGCTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GQDAVKCLYGGKSSSKHMLSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...CATGTGTTTGGAGGAGCTTTTACCCCCATACAGACATTTGACAGCGTCTTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | AGAAATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGAATCCAAAGAAGGTGTaGCTTCAGCATTCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNYCEIPKFSMYLGTIFLNPKKV*LQHSQG Trigger: TCCCTGAGAATGCTGAAGCAACACCTTCTTTGGATT...CAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588844.1 |
||
| CDS-3UTR CAA 90 bp | GCCAGATACTCTTTAATCCCACTGTTGGGAATCTGCACAATAGAAACAAAAGAAAAACGCCTTCCCGCATaGATAAGGTTTCTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARYSLIPLLGICTIETKEKRLPA*IRFLSR Trigger: TCTGGAAAGAAACCTTATCAATGCGGGAAGGCGTTT...TTCTTTTGTTTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGAGTATCTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTGAAATCCCCAAGTTTTCCATGTACCTGGGCACCATCTTCCTGTCTCTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NYCEIPKFSMYLGTIFLSLSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...AGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396893.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCTTTCCACAACTTATTGTCCCATATTTTTATGGCCAGTTTATGCAGGCACTCTTTAATCCCACTGTaGGGAATCTGCACAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VAFHNLLSHIFMASLCRHSLIPL*GICTIE Trigger: TTCTATTGTGCAGATTCCCAACAGTGGGATTAAAGA...GTGCCTGCATAAACTGGCCATAAAAATATGGGACAATAAGTTGTGGAAAGCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATCTCTTGTCCCTGATGTaGCTCAAAATGACAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDLLSLM*LKMTVA Trigger: GGCAACTGTCATTTTGAGCAACATCAGGGACAAGAG...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAACCTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATAAAATAACCCTCCTCTaGTCCCTGATGTTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEPYKEWVTSLRTDLEKYKITLL*SLMLLK Trigger: TTTGAGCAACATCAGGGACAAGAGGAGGGTTATTTT...ATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAGGTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATAAACGCCTTCCCGCATaGATAAGGTTTCTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDKRLPA*IRFLSR Trigger: TCTGGAAAGAAACCTTATCAATGCGGGAAGGCGTTT...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
||
| CDS-3UTR CAA 90 bp | CTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATTCATGATGGTTATCTCAGAGATTaGAGGGAAGGGAGGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTKNGLHLYVLTWKSIHDGYLRD*REGRKL Trigger: CAATTTCCTCCCTTCCCTCAAATCTCTGAGATAACC...ATCATGAATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CAA 90 bp | TCTGAACCTTACAAAGAATGGGTTACATCTTTACGTACTGACCTGGAAAAGTATCAAGCCTGGCCAATTTaGATAATTTTCATCCACATC | + |
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Preference number: 5 (lower is better) Translates to: SEPYKEWVTSLRTDLEKYQAWPI*IIFIHI Trigger: GATGTGGATGAAAATTATCAAAATTGGCCAGGCTTG...ATACTTTTCCAGGTCAGTACGTAAAGATGTAACCCATTCTTTGTAAGGTTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CAA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTCTTTCTGTGTACAGGTaGTTTGAGCATAAAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SVVGNGPKYGHTFHSRNILSVYR*FEHKGR Trigger: TCTTCCTTTATGCTCAAACAACCTGTACACAGAAAG...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS-3UTR CAA 90 bp | TCTGTAGTAGGTAATGGCCCAAAATACGGACATACATTCCATTCTAGAAATATTCAAGCCTGGCCAATTTaGATAATTTTCATCCACATC | + |
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Preference number: 5 (lower is better) Translates to: SVVGNGPKYGHTFHSRNIQAWPI*IIFIHI Trigger: GATGTGGATGAAAATTATCAAAATTGGCCAGGCTTG...AATATTTCTAGAATGGAATGTATGTCCGTATTTTGGGCCATTACCTACTACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396893.6 ENST00000588268.6 |
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| CDS CCA 90 bp | ATTTTAGAATTGAATGTATTATTTAATCCTCTTCTTCGTTCCCTCTaGAAGAAACTCAATCCAAAGAAGGTGTTGCTTCAGCATTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ILELNVLFNPLLRSL*KKLNPKKVLLQHSQ Trigger: CTGAGAATGCTGAAGCAACACCTTCTTTGGATTGAGTTTCTTCCAGAGGGAACGAAGAAGAGGATTAAATAATACATTCAATTCTAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 ENST00000588844.1 ENST00000590361.5 ENST00000591370.5 ENST00000591827.5 ENST00000592496.1 ENST00000592829.5 |
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| CDS GCA 72 bp | GCTCTTCCTTCTCCACCGGCCCGGGACATCCTTACCTaGCTCTACCCGGAGACCATTCCTGCGAGGCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ALPSPPARDILT*LYPETIPARLL Trigger: TAGGAGCCTCGCAGGAATGGTCTCCGGGTAGAGGCAGGTAAGGATGTCCCGGGCCGGTGGAGAAGGAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000360357.8 ENST00000588268.6 ENST00000588844.1 ENST00000590361.5 ENST00000591827.5 ENST00000592496.1 |
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| CDS GCA 72 bp | GGACATCCTTACCTGCCTCTACCCGGAGACCATTCCTaGGAGGCTCCTACCGGAAGTAGCTGTGGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GHPYLPLPGDHS*EAPTGSSCGQQ Trigger: CTGCTGTCCACAGCTACTTCCGGTAGGAGCCTCGCAGGAATGGTCTCCGGGTAGAGGCAGGTAAGGATGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591827.5 |
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| CDS TCA 72 bp | CTTCAGCATTCTCAGGGAAGGCTCTGGTCCAAGCTCTaGTTCGGATTCCAAGCGAAGCCACACGCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQHSQGRLWSKL*FGFQAKPHAQL Trigger: GAGCTGGGCGTGTGGCTTCGCTTGGAATCCGAATCAGAGCTTGGACCAGAGCCTTCCCTGAGAATGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000360357.8 ENST00000396893.6 ENST00000588268.6 ENST00000588844.1 ENST00000590361.5 ENST00000591370.5 ENST00000591827.5 ENST00000592496.1 ENST00000592829.5 |
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| CDS CAA 72 bp | GGCGATATCCTGCCTTCTTACACTATGCAGTGGTTTTaGTCTATTTCTGAATTTCCAATAAATGGAATGATA | + |
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Preference number: 6 (lower is better) Translates to: GDILPSYTMQWF*SISEFPINGMI Trigger: TATCATTCCATTTATTGGAAATTCAGAAATAGACAAAAACCACTGCATAGTGTAAGAAGGCAGGATATCGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540605.2 |
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