Pregenerated sensors for ZNF454-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272431Ensembl transcript IDs: ENST00000606195.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTGGAAGACTTGGGCCTTTGTATGTCAGTTCTTTGCCATCTGGGTaGCAAGTAATAAGAGCACTTTTGAACCTTCCAACATCAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGRLGPLYVSSLPSG*QVIRALLNLPTSTG Trigger: TCCTGTTGATGTTGGAAGGTTCAAAAGTGCTCTTATTACTTGTCACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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| CDS CCA 90 bp | CAGTTCTGGAAGACTTGGGCCTTTGTATGTCAGTTCTTTGCCATCTaGGTGACAAGTAATAAGAGCACTTTTGAACCTTCCAACATCAAC | + |
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Preference number: 5 (lower is better) Translates to: QFWKTWAFVCQFFAI*VTSNKSTFEPSNIN Trigger: GTTGATGTTGGAAGGTTCAAAAGTGCTCTTATTACTTGTCACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTTCCAGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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| CDS GCA 72 bp | AACCCGGGAGGCGGAGCTTGCGGTAAGCCGAGGTCATaGCATTGCACCCCAGCCCGGGCAACAAAAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NPGGGACGKPRS*HCTPARATKVK Trigger: TTTCACTTTTGTTGCCCGGGCTGGGGTGCAATGGCATGACCTCGGCTTACCGCAAGCTCCGCCTCCCGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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| CDS GCA 72 bp | GGAGGCGGAGCTTGCGGTAAGCCGAGGTCATGCCATTaGACCCCAGCCCGGGCAACAAAAGTGAAACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GGGACGKPRSCH*TPARATKVKLC Trigger: ACACAGTTTCACTTTTGTTGCCCGGGCTGGGGTGCAATGGCATGACCTCGGCTTACCGCAAGCTCCGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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| CDS CCA 72 bp | AAGACTTGGGCCTTTGTATGTCAGTTCTTTGCCATCTaGGTGACAAGTAATAAGAGCACTTTTGAACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KTWAFVCQFFAI*VTSNKSTFEPS Trigger: GGAAGGTTCAAAAGTGCTCTTATTACTTGTCACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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| CDS CAA 72 bp | ATGAAGGTTTTATTACTGTTTTCAGTTCTGGAAGACTaGGGCCTTTGTATGTCAGTTCTTTGCCATCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: MKVLLLFSVLED*GLCMSVLCHLG Trigger: ACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTTCCAGAACTGAAAACAGTAATAAAACCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606195.1 |
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