RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF451 (Homo sapiens)

Ensembl gene IDs: ENSG00000112200

Ensembl transcript IDs: ENST00000357489.7, ENST00000370706.9, ENST00000370708.8, ENST00000370711.9, ENST00000444273.6, ENST00000491832.6, ENST00000502749.1, ENST00000504603.1, ENST00000508548.1, ENST00000508603.5, ENST00000509251.1, ENST00000510483.5, ENST00000510989.1

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAAGGTaGTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTT +
Preference number: 1 (lower is better)
Translates to: HQCPSHLCVESLATR*CLLLPCPHICLTTL
Trigger: AAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCACCTTGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR GCA 90 bp GATTGTCAGGCATGTTTGGAATTCTTGGTCTTAGGAGTTCAGATTTaGATGCCTGGATCGTGTAACATCCTTTATTTCCAGGGCACTGAT +
Preference number: 1 (lower is better)
Translates to: DCQACLEFLVLGVQI*MPGSCNILYFQGTD
Trigger: ATCAGTGCCCTGGAAATAAAGGATGTTACACGATCCAGGCATGCAAATCTGAACTCCTAAGACCAAGAATTCCAAACATGCCTGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CCA 90 bp CAGTGCATTATAGGACATAAAATTGGTTTCCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAACTTTTTGTTCCACAATTAATTGTG +
Preference number: 1 (lower is better)
Translates to: QCIIGHKIGFPDTHV*PPLRNELFVPQLIV
Trigger: CACAATTAATTGTGGAACAAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTATGTCCTATAATGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR GCA 90 bp TATTCAGACCCCTCAAATTTGACATATTCTCCATTCCTGATGTCATaGTGTGAAGACATGGATCTAAGGGCTGATATACCATACATCCAC +
Preference number: 1 (lower is better)
Translates to: YSDPSNLTYSPFLMS*CEDMDLRADIPYIH
Trigger: GTGGATGTATGGTATATCAGCCCTTAGATCCATGTCTTCACAGCATGACATCAGGAATGGAGAATATGTCAAATTTGAGGGGTCTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 90 bp AATTCAAATGTCAGCTGTGATCATTCCAGACATGCATCCAGTTTTTaGGATGATCTCCTACCTGTAGATCCTATTTGTACAAGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: NSNVSCDHSRHASSF*DDLLPVDPICTRRN
Trigger: GTTCCTCCTTGTACAAATAGGATCTACAGGTAGGAGATCATCTCAAAAACTGGATGCATGTCTGGAATGATCACAGCTGACATTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 90 bp ACATCTAGCCATTCCAAGGGGAAGCAAACTGGATTTGGCAAAATTTaGTTTGAATTCCAGTTGACACAAAGCTTCATGGCTGATTCTGAA +
Preference number: 1 (lower is better)
Translates to: TSSHSKGKQTGFGKI*FEFQLTQSFMADSE
Trigger: TTCAGAATCAGCCATGAAGCTTTGTGTCAACTGGAATTCAAATCAAATTTTGCCAAATCCAGTTTGCTTCCCCTTGGAATGGCTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 90 bp TCCACTACCTTGAGTCTAAAGAGAAGATACTGTGGGACATATAATTaGGGTATCTGCTGCCAGTTCCAGTATGGTGAAAAACTATTAATG +
Preference number: 1 (lower is better)
Translates to: STTLSLKRRYCGTYN*GICCQFQYGEKLLM
Trigger: CATTAATAGTTTTTCACCATACTGGAACTGGCAGCAGATACCTCAATTATATGTCCCACAGTATCTTCTCTTTAGACTCAAGGTAGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 90 bp CTTATTGAATTCTTGACAAGGTACCACAAAACCCAACAGACCATTTaGAATAGGTTACCTCAACCAGTAAAGCCCTTAACATCTACGGAA +
Preference number: 1 (lower is better)
Translates to: LIEFLTRYHKTQQTI*NRLPQPVKPLTSTE
Trigger: TTCCGTAGATGTTAAGGGCTTTACTGGTTGAGGTAACCTATTTCAAATGGTCTGTTGGGTTTTGTGGTACCTTGTCAAGAATTCAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 90 bp AAAGTAGAGTTAACAAGAGGTCTAACTGTAGCCCTTAACAGTAAATaGTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTAC +
Preference number: 1 (lower is better)
Translates to: KVELTRGLTVALNSK*CDRATLTGNERKQY
Trigger: GTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGTTAAGGGCTACAGTTAGACCTCTTGTTAACTCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 90 bp CATGGCAGGCATAATATGAGGATTTATTATCTGACTAAGAGTTTCTaGTTCTATTGGGGTAATCTCCCTAGACCAAATCCTCACTTTAAG +
Preference number: 1 (lower is better)
Translates to: HGRHNMRIYYLTKSF*FYWGNLPRPNPHFK
Trigger: CTTAAAGTGAGGATTTGGTCTAGGGAGATTACCCCAATAGAATCAGAAACTCTTAGTCAGATAATAAATCCTCATATTATGCCTGCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 90 bp GTTCTTCTTCTGCAAAATAAGAATGAATTTCTCTCAAGAGTGCCTTaGAATCAGCACAGAGCCTGTACTACAGACTATACAAATGTAGAT +
Preference number: 1 (lower is better)
Translates to: VLLLQNKNEFLSRVP*NQHRACTTDYTNVD
Trigger: ATCTACATTTGTATAGTCTGTAGTACAGGCTCTGTGCTGATTGCAAGGCACTCTTGAGAGAAATTCATTCTTATTTTGCAGAAGAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGAAGGTCTCTCACCACTaGGTTCTCCAGTGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: VIPATREAETELLEPGRWKVSHH*VLQWQV
Trigger: GACTTGCCACTGGAGAACTCAGTGGTGAGAGACCTT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp GCAAAGGAGCTGAAGAAAGGTCCATGTAGTGTAATTGTTGGATCACATGGAGAGCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAA +
Preference number: 2 (lower is better)
Translates to: AKELKKGPCSVIVGSHGEPDTHV*PPLRNE
Trigger: TTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGG...CTCTCCATGTGATCCAACAATTACACTACATGGACCTTTCTTCAGCTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR CAA 90 bp TGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTaGCTCCCATTTTGTGAGCTCCTGCAGATGTGTTTAAGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: CPHICLTTLLSGMPL*LPFCELLQMCLRSS
Trigger: GCTGGACCTTAAACACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCGAGGATTCAGATTCCTaGGTGGTCCTCCTCCACACT +
Preference number: 2 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSEDSDS*VVLLHT
Trigger: AGTGTGGAGGAGGACCACTCAGGAATCTGAATCCTC...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp ACACCACAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTaGTGTAGAATCTCTGGCAACAAGGTGCTGTCTCCTCTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: TPQKLLNRASVSITP*CRISGNKVLSPLAL
Trigger: CAGGGCAAGAGGAGACAGCACCTTGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCT +
Preference number: 2 (lower is better)
Translates to: ALPPHLLNYSSFWNASFALFKAT*CCVVIS
Trigger: AGATATTACCACACAACATCAAGTGGCCTTGAAGAG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CCA 90 bp ATAAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: IKLVSQTPTCGLLFGMNFGIFSH*STHSLA
Trigger: AGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCC...AAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAGCAATAATTTACATATaGATGGCACCCACAAAGAAC +
Preference number: 2 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGAIIYI*MAPTKN
Trigger: GTTCTTTGTGGGTGCCATGCATATGTAAATTATTGC...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR GCA 90 bp AAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTTTGTCCACACACAGTCTTaGTGCTTCTGTATCAGAATG +
Preference number: 2 (lower is better)
Translates to: KIGFPDTHVWPPLRNELFVHTQS*CFCIRM
Trigger: CATTCTGATACAGAAGCAGCAAGACTGTGTGTGGAC...AAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR CCA 90 bp TCAAATGTCCTAAGAGAAGGTGCCCATTGTCAAACTCCTTGTTACAGTGCATTATTCTCCACTTCAACATaGCGGGCTAGACGAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SNVLREGAHCQTPCYSALFSTST*RARRAR
Trigger: TCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAA...TAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGTACGGACTCTTGGTaGGTTGACCATCTTGACATA +
Preference number: 2 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSSTDSW*VDHLDI
Trigger: TATGTCAAGATGGTCAACTCACCAAGAGTCCGTACT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TGTGCAATTTCTACAGAGATGTTACAGGTAGAAGTCTTTTTCCAGTaGGTGTCCATAATAGACCTGCGACATCTAGCCATTCCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: CAISTEMLQVEVFFQ*VSIIDLRHLAIPRG
Trigger: TCCCCTTGGAATGGCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGTAACATCTCTGTAGAAATTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTAGAAGGCCATCTTGGTaGAAGGCCCAGCTTACAGTG +
Preference number: 2 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFRRPSW*KAQLTV
Trigger: CACTGTAAGCTGGGCCTTTCACCAAGATGGCCTTCT...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGGAGTTCAGATTTGCATaGCTGGATCGTGTAACATCC +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEEFRFA*LDRVTS
Trigger: GGATGTTACACGATCCAGGCATGCAAATCTGAACTC...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp TCCTTGTTACAGTGCATTATAGGACATAAAATTGGTTTCCCAGACACCCACGTGCACACACAGTCTTGCTaGTTCTGTATCAGAATGTCC +
Preference number: 2 (lower is better)
Translates to: SLLQCIIGHKIGFPDTHVHTQSC*FCIRMS
Trigger: GGACATTCTGATACAGAAGCAGCAAGACTGTGTGTG...CACGTGGGTGTCTGGGAAACCAATTTTATGTCCTATAATGCACTGTAACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCATTCAGATTCCTGAGTaGTCCTCCTCCACACTTATT +
Preference number: 2 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSIQIPE*SSSTLI
Trigger: AATAAGTGTGGAGGAGGACCACTCAGGAATCTGAAT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp CTTCTCCTATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGGAACGCAGTGTCTTGTaGCAGGCCACACACTTAACT +
Preference number: 2 (lower is better)
Translates to: LLLLKYFWHPCYHHCHILERSVL*QATHLT
Trigger: AGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTC...CAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAATAGGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
3UTR CAA 90 bp GTATCCCTCTTTATTACAATAAGGGGACAAGATTGTCAGGCATGTTaGGAATTCTTGGTCTTAGGAGTTCAGATTTGCATGCCTGGATCG +
Preference number: 2 (lower is better)
Translates to: VSLFITIRGQDCQAC*EFLVLGVQICMPGS
Trigger: CGATCCAGGCATGCAAATCTGAACTCCTAAGACCAAGAATTCCAAACATGCCTGACAATCTTGTCCCCTTATTGTAATAAAGAGGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TTTTACCAGACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTaGTTTACAGTACCTGAGAGGTTATCCTGGATGTATCAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: FYQTKGFRNVSFSTS*FTVPERLSWMYQVL
Trigger: AAGGACCTGATACATCCAGGATAACCTCTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGTCTGGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGTTCAAATGTCAGCTGTaGTCATTCCAGACATGCATC +
Preference number: 2 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTFKCQL*SFQTCI
Trigger: GATGCATGTCTGGAATGATCACAGCTGACATTTGAA...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCATGGATCTAAGGGCTaGTATACCATACATCCACTA +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEHGSKG*YTIHPL
Trigger: TAGTGGATGTATGGTATATCAGCCCTTAGATCCATG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGATGGGGGAGGAGGAATaGGCTTCCAATAGATTATTA +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEMGEEE*ASNRLL
Trigger: TAATAATCTATTGGAAGCTCATTCCTCCTCCCCCAT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTCCCTGCCCCCACATCTaGTTAACTACTCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: QKLLNRASVSITPLCRISPCPHI*LTTLLS
Trigger: AGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGG...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR GCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCCATTCCTGATGTCATaGTGTGAAGACATGGATCTA +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEPFLMS*CEDMDL
Trigger: TAGATCCATGTCTTCACAGCATGACATCAGGAATGG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCATCAATTACCACTGTaGAACAACTGTGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEHQLPL*NNCGKN
Trigger: GTTCTTGCCACAGTTGTTGCACAGTGGTAATTGATG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TCCTCCTCCACACTTATTTTTGGACCAGAAATAAAGGATAAACATTaGTCCAACCCTTTCAAGAAAGTCTCCACTGCTCACTTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: SSSTLIFGPEIKDKH*SNPFKKVSTAHLAN
Trigger: ATTGGCCAAGTGAGCAGTGGAGACTTTCTTGAAAGGGTTGGACAAATGTTTATCCTTTATTTCTGGTCCAAAAATAAGTGTGGAGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGATGTGTCATTTTGTaGAGATCTGTCAAACTGAAG +
Preference number: 2 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSRCVIL*RSVKLK
Trigger: CTTCAGTTTGACAGATCTTCACAAAATGACACATCT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCCTGATGTCATGCTGTaGAGACATGGATCTAAGGGC +
Preference number: 2 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFPDVML*RHGSKG
Trigger: GCCCTTAGATCCATGTCTTCACAGCATGACATCAGG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAAACTACTCTTCTTTCTaGAATGCCTCTTTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: FLIEHQCPSHLCVESLATNYSSF*NASFAP
Trigger: GGGAGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTT...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCTTTGTAGAGAACACTaGCATGGACCTATTTCTACA +
Preference number: 2 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPELCREH*HGPIST
Trigger: TGTAGAAATAGGTCCATGCCAGTGTTCTCTACAAAG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TTTATTACAATAAGGGGACAAGATTGTCAGGCATGTTTGGAATTCTaGGTCTTAGGAGTTCAGATTTGCATGCCTGGATCGTGTAACATC +
Preference number: 2 (lower is better)
Translates to: FITIRGQDCQACLEF*VLGVQICMPGSCNI
Trigger: GATGTTACACGATCCAGGCATGCAAATCTGAACTCCTAAGACCAAGAATTCCAAACATGCCTGACAATCTTGTCCCCTTATTGTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp AACCTTTTCAAATGTCCTAAGAGAAGGTGCCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGACATAAAATTGGTTTCCCAGACACC +
Preference number: 2 (lower is better)
Translates to: NLFKCPKRRCPLSNS*LQCIIGHKIGFPDT
Trigger: GGTGTCTGGGAAACCAATTTTATGTCCTATAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTTGAAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR TCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTCTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCT +
Preference number: 2 (lower is better)
Translates to: QKLLNRASVSITPLCRISLFKAT*CCVVIS
Trigger: AGATATTACCACACAACATCAAGTGGCCTTGAAGAG...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR TCA 90 bp ATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCCTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCT +
Preference number: 2 (lower is better)
Translates to: IEVFLAPMLSSLSHSEMGLFKAT*CCVVIS
Trigger: AGATATTACCACACAACATCAAGTGGCCTTGAAGAG...GCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
3UTR-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCATGCATCCAGTTTTTaGGATGATCTCCTACCTGTA +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTHASSF*DDLLPV
Trigger: TACAGGTAGGAGATCATCTCAAAAACTGGATGCATG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAGAAGTAAGAGAACATaGTGGTTTAGCAAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTRSKRT*WFSKQA
Trigger: TGCCTGCTTGCTAAACCATCATGTTCTCTTACTTCT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
3UTR-3UTR GCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTGGAGCTGCGCAACAATaGAAATATAGTCAACACTAC +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTGAAQQ*KYSQHY
Trigger: GTAGTGTTGACTATATTTGCATTGTTGCGCAGCTCC...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGATCACCTTTGTTATTaGTTTCTGGTTTTCACCTCT +
Preference number: 2 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYDHLCY*FLVFTS
Trigger: AGAGGTGAAAACCAGAAAGCAATAACAAAGGTGATC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
3UTR-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGACTGTGCAACAACTGTaGCAAGAACAGAAGCCACAT +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLTVQQL*QEQKPH
Trigger: ATGTGGCTTCTGTTCTTGCCACAGTTGTTGCACAGT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTAACAGTGCGAGACTGTaGCAAAATATGCCTCACATA +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTNSARL*QNMPHI
Trigger: TATGTGAGGCATATTTTGCCACAGTCTCGCACTGTT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp ACATGTAGCTTTATGAGTAGTGATGGTATGGTGGCCATCAAAGTCTaGATGAAGATAGTTACTGTGCAATTTCTACAGAGATGTTACAGG +
Preference number: 2 (lower is better)
Translates to: TCSFMSSDGMVAIKV*MKIVTVQFLQRCYR
Trigger: CCTGTAACATCTCTGTAGAAATTGCACAGTAACTATCTTCATCAAGACTTTGATGGCCACCATACCATCACTACTCATAAAGCTACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGATCCAGTTTTTGAGATaGTCTCCTACCTGTAGATCC +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLIQFLR*SPTCRS
Trigger: GGATCTACAGGTAGGAGATCATCTCAAAAACTGGAT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCGAAGATCTGTCAAACTaGAGCCTGAACAAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFEDLSN*SLNKEA
Trigger: TGCTTCCTTGTTCAGGCTTCAGTTTGACAGATCTTC...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGTCACATGTAGCTTTATaGGTAGTGATGGTATGGTGG +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLSHVAL*VVMVWW
Trigger: CCACCATACCATCACTACTCATAAAGCTACATGTGA...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCCAGTTCCAGTATGGTaGAAAACTATTAATGGGACC +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLPVPVW*KTINGT
Trigger: GGTCCCATTAATAGTTTTTCACCATACTGGAACTGG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGTTAGGAGTTCAGATTTaGATGCCTGGATCGTGTAAC +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLGVQI*MPGSCN
Trigger: GTTACACGATCCAGGCATGCAAATCTGAACTCCTAA...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAAGAACTAATGCTATTTaGGAAACAACTGTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: FLIEHQCPSHLCVESLATRTNAI*ETTVKS
Trigger: GCTCTTGACAGTTGTTTCCCAAATAGCATTAGTTCT...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCAGAAACAGAGCTGTGTaGCTTGTTCTCTTCACCACA +
Preference number: 2 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFRNRAV*LVLFTT
Trigger: TGTGGTGAAGAGAACAAGCCACACAGCTCTGTTTCT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGGAAAACAGAGTATCTaGAGACACTTGGGCATATCA +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLGKQSI*RHLGIS
Trigger: TGATATGCCCAAGTGTCTCCAGATACTCTGTTTTCC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TCCACATCTTCTGTGGATATAAATTCTTCTCCTATTGAAGTATTTTaGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCAGT +
Preference number: 2 (lower is better)
Translates to: STSSVDINSSPIEVF*APMLSSLSHSEMGS
Trigger: ACTGCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAATAGGAGAAGAATTTATATCCACAGAAGATGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504603.1
3UTR-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCGATTTGAATTCCAGTTaGCACAAAGCTTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFDLNSS*HKASWL
Trigger: CAGCCATGAAGCTTTGTGTCAACTGGAATTCAAATC...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTTTCAGAAAGAGGTGTTaGATACAGGAGAAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTFRKRC*IQEKKR
Trigger: TCTTTTCTTCTCCTGTATTCAACACCTCTTTCTGAA...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTAAAAGGACTACTAACTaGACACAATTCTTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTKRTTN*TQFLKH
Trigger: GTGCTTCAAGAATTGTGTTCAGTTAGTAGTCCTTTT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTAGAACTAATGCTATTTaGGAAACAACTGTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: QKLLNRASVSITPLCRISRTNAI*ETTVKS
Trigger: GCTCTTGACAGTTGTTTCCCAAATAGCATTAGTTCT...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGAATATCAAGAGCACATaGGATTGCTTGATTGGTGCA +
Preference number: 2 (lower is better)
Translates to: KYRMIDSKRQENLNSARLNIKST*DCLIGA
Trigger: TGCACCAATCAAGCAATCCCATGTGCTCTTGATATT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCGCAAATAATACTAGGTaGTGTATTCAGACCCCTCAA +
Preference number: 2 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFANNTR*CIQTPQ
Trigger: TTGAGGGGTCTGAATACATCACCTAGTATTATTTGC...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR GCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCATATTAAAGGGAAGTaGCAAAATCGTTTCAGACAA +
Preference number: 2 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTHIKGK*QNRFRQ
Trigger: TTGTCTGAAACGATTTTGGCACTTCCCTTTAATATG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 90 bp TGGAAAAAGTCCATATTTAAAGCTCAGTTCCACCACCTGAGCAAGTaGCTTAATGACTTAATGAAGTTTCAGTTCTTCTTCTGCAAAATA +
Preference number: 2 (lower is better)
Translates to: WKKSIFKAQFHHLSK*LNDLMKFQFFFCKI
Trigger: TATTTTGCAGAAGAAGAACTGAAACTTCATTAAGTCATTAAGCAACTTGCTCAGGTGGTGGAACTGAGCTTTAAATATGGACTTTTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp CCATCACACCTTTGTGTAGAATCTCTGGCAACAAGGTaGTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTA +
Preference number: 3 (lower is better)
Translates to: PSHLCVESLATR*CLLLPCPHICL
Trigger: TAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCACCTTGTTGCCAGAGATTCTACACAAAGGTGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CAA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGGATTGTCAGGCATGTTaGGAATTCTTGGTCTTAGGA +
Preference number: 3 (lower is better)
Translates to: VIPATREAETELLEPGRWDCQAC*EFLVLG
Trigger: TCCTAAGACCAAGAATTCCAAACATGCCTGACAATC...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATCTCTTCAAGGCCACTaGATGTTGTGTGGTAATATC +
Preference number: 3 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGSLQGH*MLCGNI
Trigger: GATATTACCACACAACATCAAGTGGCCTTGAAGAGA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CAA 90 bp AAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTTTGGTCCACACACAGTCTaGCTGCTTCTGTATCAGAAT +
Preference number: 3 (lower is better)
Translates to: KIGFPDTHVWPPLRNELFGPHTV*LLLYQN
Trigger: ATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACC...AAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR CCA 72 bp ATTGTGCCTGTTTTGAGTCCTGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCTGCTTCTGTATCAGAA +
Preference number: 3 (lower is better)
Translates to: IVPVLSPGIFSH*STHSLAASVSE
Trigger: TTCTGATACAGAAGCAGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCCAGGACTCAAAACAGGCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR TCA 72 bp TTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATaGACTTTTTGTTCCACAATTAATTGTGCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: FPRHPRVASSSE*TFCSTINCACF
Trigger: AAAACAGGCACAATTAATTGTGGAACAAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR CCA 72 bp ATAGGACATAAAATTGGTTTCCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAACTTTTTGTTCCACAA +
Preference number: 3 (lower is better)
Translates to: IGHKIGFPDTHV*PPLRNELFVPQ
Trigger: TTGTGGAACAAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTATGTCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
3UTR-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATCTGGAATGCCTCTTTaGCTCCCATTTTGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: FLIEHQCPSHLCVESLATSGMPL*LPFCEL
Trigger: GAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CAA 90 bp ATTCTTCTCCTATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTTGGGAACGCAGTGTCTaGTGGCAGGCCACACACTTA +
Preference number: 3 (lower is better)
Translates to: ILLLLKYFWHPCYHHCHIWERSV*WQATHL
Trigger: TAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCA...AATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAATAGGAGAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
3UTR TCA 72 bp TGGGTGCTGAATATGGTTATGATGGGGGAGGAGGAATaGGCTTCCAATAGATTATTAAAAAGTGTGGCACCA +
Preference number: 3 (lower is better)
Translates to: WVLNMVMMGEEE*ASNRLLKSVAP
Trigger: TGGTGCCACACTTTTTAATAATCTATTGGAAGCTCATTCCTCCTCCCCCATCATAACCATATTCAGCACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp GTCAGCTGTGATCATTCCAGACATGCATCCAGTTTTTaGGATGATCTCCTACCTGTAGATCCTATTTGTACA +
Preference number: 3 (lower is better)
Translates to: VSCDHSRHASSF*DDLLPVDPICT
Trigger: TGTACAAATAGGATCTACAGGTAGGAGATCATCTCAAAAACTGGATGCATGTCTGGAATGATCACAGCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp GCATGTTTGGAATTCTTGGTCTTAGGAGTTCAGATTTaGATGCCTGGATCGTGTAACATCCTTTATTTCCAG +
Preference number: 3 (lower is better)
Translates to: ACLEFLVLGVQI*MPGSCNILYFQ
Trigger: CTGGAAATAAAGGATGTTACACGATCCAGGCATGCAAATCTGAACTCCTAAGACCAAGAATTCCAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp CCCTCAAATTTGACATATTCTCCATTCCTGATGTCATaGTGTGAAGACATGGATCTAAGGGCTGATATACCA +
Preference number: 3 (lower is better)
Translates to: PSNLTYSPFLMS*CEDMDLRADIP
Trigger: TGGTATATCAGCCCTTAGATCCATGTCTTCACAGCATGACATCAGGAATGGAGAATATGTCAAATTTGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CCA 72 bp CCCAATACCTTTACACTTCCAGGAAAACAGAGTATCTaGAGACACTTGGGCATATCAGTTAGAGTAACTAAG +
Preference number: 3 (lower is better)
Translates to: PNTFTLPGKQSI*RHLGISVRVTK
Trigger: CTTAGTTACTCTAACTGATATGCCCAAGTGTCTCCAGATACTCTGTTTTCCTGGAAGTGTAAAGGTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CCA 72 bp TCAACCTCCTTGTTTACAGTACCTGAGAGGTTATCCTaGATGTATCAGGTCCTTAAGGACATTATCAATCAG +
Preference number: 3 (lower is better)
Translates to: STSLFTVPERLS*MYQVLKDIINQ
Trigger: CTGATTGATAATGTCCTTAAGGACCTGATACATCCAGGATAACCTCTCAGGTACTGTAAACAAGGAGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGACCTGTAGATCCTATTaGTACAAGGAGGAACAAGTA +
Preference number: 3 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPETCRSY*YKEEQV
Trigger: TACTTGTTCCTCCTTGTACAAATAGGATCTACAGGT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCATACATCCACTACCTaGAGTCTAAAGAGAAGATAC +
Preference number: 3 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEHTSTT*SLKRRY
Trigger: GTATCTTCTCTTTAGACTCAAGGTAGTGGATGTATG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp CTTCTCCTATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGGGCCACACACTTAACTaGAAAGGGAACATCTTTGCA +
Preference number: 3 (lower is better)
Translates to: LLLLKYFWHPCYHHCHILGHTLN*KGNIFA
Trigger: TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCC...CAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAATAGGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
3UTR-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATCTCTTCAAGGCCACTaGATGTTGTGTGGTAATATC +
Preference number: 3 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTSLQGH*MLCGNI
Trigger: GATATTACCACACAACATCAAGTGGCCTTGAAGAGA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTCAAGAGCACATGGGATaGCTTGATTGGTGCAATACA +
Preference number: 3 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFQEHMG*LDWCNT
Trigger: TGTATTGCACCAATCAAGCAATCCCATGTGCTCTTG...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTAGTATCTGGAGACACTaGGGCATATCAGTTAGAGTA +
Preference number: 3 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTSIWRH*GISVRV
Trigger: TACTCTAACTGATATGCCCAAGTGTCTCCAGATACT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp TTCTTGACAAGGTACCACAAAACCCAACAGACCATTTaGAATAGGTTACCTCAACCAGTAAAGCCCTTAACA +
Preference number: 3 (lower is better)
Translates to: FLTRYHKTQQTI*NRLPQPVKPLT
Trigger: TGTTAAGGGCTTTACTGGTTGAGGTAACCTATTTCAAATGGTCTGTTGGGTTTTGTGGTACCTTGTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp TTAACAAGAGGTCTAACTGTAGCCCTTAACAGTAAATaGTGTGATAGAGCCACTCTTACGGGTAATGAAAGA +
Preference number: 3 (lower is better)
Translates to: LTRGLTVALNSK*CDRATLTGNER
Trigger: TCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGTTAAGGGCTACAGTTAGACCTCTTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp CTGCAAAATAAGAATGAATTTCTCTCAAGAGTGCCTTaGAATCAGCACAGAGCCTGTACTACAGACTATACA +
Preference number: 3 (lower is better)
Translates to: LQNKNEFLSRVP*NQHRACTTDYT
Trigger: TGTATAGTCTGTAGTACAGGCTCTGTGCTGATTGCAAGGCACTCTTGAGAGAAATTCATTCTTATTTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp TTCTTCTGCAAAATAAGAATGAATTTCTCTCAAGAGTaGCTTGCAATCAGCACAGAGCCTGTACTACAGACT +
Preference number: 3 (lower is better)
Translates to: FFCKIRMNFSQE*LAISTEPVLQT
Trigger: AGTCTGTAGTACAGGCTCTGTGCTGATTGCAAGGCACTCTTGAGAGAAATTCATTCTTATTTTGCAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCGAAGTCTCACAGAGCTaGATAGTAGTACGGACTCTT +
Preference number: 3 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFEVSQS*IVVRTL
Trigger: AAGAGTCCGTACTACTATCAAGCTCTGTGAGACTTC...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGAAGTCTTTTTCCAGTaGGTGTCCATAATAGACCTG +
Preference number: 3 (lower is better)
Translates to: KYRMIDSKRQENLNSARLEVFFQ*VSIIDL
Trigger: CAGGTCTATTATGGACACCAACTGGAAAAAGACTTC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGACCAGATCATTAAACTaGCAACTATTCCAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: KYRMIDSKRQENLNSARLTRSLN*QLFQGL
Trigger: GAGGCCTTGGAATAGTTGCAAGTTTAATGATCTGGT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp TTGAGTCTAAAGAGAAGATACTGTGGGACATATAATTaGGGTATCTGCTGCCAGTTCCAGTATGGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: LSLKRRYCGTYN*GICCQFQYGEK
Trigger: TTTTTCACCATACTGGAACTGGCAGCAGATACCTCAATTATATGTCCCACAGTATCTTCTCTTTAGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp AATGACTACGAATCAAGAATAATCTTAGTCCAGCAGTaGAATCTCAATGGGAGAACTAAGAGGATAGGGTTC +
Preference number: 3 (lower is better)
Translates to: NDYESRIILVQQ*NLNGRTKRIGF
Trigger: GAACCCTATCCTCTTAGTTCTCCCATTGAGATTTCACTGCTGGACTAAGATTATTCTTGATTCGTAGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CCA 72 bp ATAACTGATATGCTAACAACATCAAAAGGACATGGTTaGACTATGACCACTTCCAGATATATCCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: ITDMLTTSKGHG*TMTTSRYIPQE
Trigger: TTCCTGTGGGATATATCTGGAAGTGGTCATAGTCCAACCATGTCCTTTTGATGTTGTTAGCATATCAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCAGCACATGGGATTGCTaGATTGGTGCAATACACATA +
Preference number: 3 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFSTWDC*IGAIHI
Trigger: TATGTGTATTGCACCAATCAAGCAATCCCATGTGCT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp AAAAACACATGGAGGCAGCCTAGTATAATGCTGAATTaGGACTGGAAAAAGTCCATATTTAAAGCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: KNTWRQPSIMLN*DWKKSIFKAQF
Trigger: GAACTGAGCTTTAAATATGGACTTTTTCCAGTCTCAATTCAGCATTATACTAGGCTGCCTCCATGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CCA 72 bp CAGTGCCAATATCAAGAGCACATGGGATTGCTTGATTaGTGCAATACACATAAGCTACAAAAATGTATGATT +
Preference number: 3 (lower is better)
Translates to: QCQYQEHMGLLD*CNTHKLQKCMI
Trigger: AATCATACATTTTTGTAGCTTATGTGTATTGCACCAATCAAGCAATCCCATGTGCTCTTGATATTGGCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTATGACTGGGCTAAATTaGCAAAACAATATCCCCTTT +
Preference number: 3 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFMTGLN*QNNIPF
Trigger: AAAGGGGATATTGTTTTGCAAATTTAGCCCAGTCAT...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp ATCAATACACAGGCCGTTCTGTCCCAAGAATCTAAATaGGACTACTTATATAACTATATTCTACTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: INTQAVLSQESK*DYLYNYILLKA
Trigger: TGCCTTCAGTAGAATATAGTTATATAAGTAGTCTCATTTAGATTCTTGGGACAGAACGGCCTGTGTATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR GCA 72 bp TGCCAATATCAAGAGCACATGGGATTGCTTGATTGGTaGAATACACATAAGCTACAAAAATGTATGATTTCT +
Preference number: 3 (lower is better)
Translates to: CQYQEHMGLLDW*NTHKLQKCMIS
Trigger: AGAAATCATACATTTTTGTAGCTTATGTGTATTGCACCAATCAAGCAATCCCATGTGCTCTTGATATTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp CATAATATGAGGATTTATTATCTGACTAAGAGTTTCTaGTTCTATTGGGGTAATCTCCCTAGACCAAATCCT +
Preference number: 3 (lower is better)
Translates to: HNMRIYYLTKSF*FYWGNLPRPNP
Trigger: AGGATTTGGTCTAGGGAGATTACCCCAATAGAATCAGAAACTCTTAGTCAGATAATAAATCCTCATATTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR TCA 72 bp TCAAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCTTTAATTACATTTCCT +
Preference number: 3 (lower is better)
Translates to: SRIRYLSLFKAT*CCVVISLITFP
Trigger: AGGAAATGTAATTAAAGATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTTACTGGCCCGCTATaGCCCCGGAGCCGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLTGPL*PRSRFL
Trigger: GAGAAAGCGGCTCCGGGGGCATAGCGGGCCAGTAAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357489.7
CDS-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGCCTGATGTCATGCTGTaGAGACATGGATCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWPDVML*RHGSKG
Trigger: GCCCTTAGATCCATGTCTTCACAGCATGACATCAGG...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGTCCCAGAGAAGGAGCTaGTATCTCCAATGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWSQRRS*YLQWEE
Trigger: CTCTTCCCATTGGAGATAGCAGCTCCTTCTCTGGGA...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGAAACAGCTCCTGGACTaGAGATCACGTATCACTCGG +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWKQLLD*RSRITR
Trigger: CCGAGTGATACGTGATCTGCAGTCCAGGAGCTGTTT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAATGGGCAGTGAGCTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACGAACGCAGTGTCTTGTaGCAGGCCACACACTTAACT +
Preference number: 4 (lower is better)
Translates to: KWAVSSMWERSVLWQATHERSVL*QATHLT
Trigger: AGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTC...GTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAGCTCACTGCCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CCA 90 bp CTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTGAAAGGGGCAGTGAGCTCCATGTaGGAACGCAGTGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LHVGTQCLVAGHTLNLKGAVSSM*ERSVLW
Trigger: CCACAAGACACTGCGTTCCCACATGGAGCTCACTGC...CCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CCA 90 bp AAATGGGCAGTGAGCTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTGTCACATTCTGAAATaGGCAGTGAGCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: KWAVSSMWERSVLWQATHCHILK*AVSSMW
Trigger: CCACATGGAGCTCACTGCCCATTTCAGAATGTGACA...GTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAGCTCACTGCCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGAGTACGGACTCTTGGTaGGTTGACCATCTTGACATA +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWSTDSW*VDHLDI
Trigger: TATGTCAAGATGGTCAACTCACCAAGAGTCCGTACT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTGGTGCTGTCTCCTCTTaGCCTGCCCCCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCGAVSS*PAPTSA
Trigger: AGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCACC...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAAGGAGCGGCCCTTACTaGCCCGCTATGCCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATRSGPY*PAMPPE
Trigger: CTCCGGGGGCATAGCGGGCCAGTAAGGGCCGCTCCT...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357489.7
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTGCAGTGAGCTCCATGTaGGAACGCAGTGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAAVSSM*ERSVLW
Trigger: CCACAAGACACTGCGTTCCCACATGGAGCTCACTGC...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGATGGGGGAGGAGGAATaGGCTTCCAATAGATTATTA +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWMGEEE*ASNRLL
Trigger: TAATAATCTATTGGAAGCTCATTCCTCCTCCCCCAT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGAATTTCTCTCAAGAGTaGCTTGCAATCAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWNFSQE*LAISTE
Trigger: CTCTGTGCTGATTGCAAGGCACTCTTGAGAGAAATT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGATTCAGATTCCTGAGTaGTCCTCCTCCACACTTATT +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWIQIPE*SSSTLI
Trigger: AATAAGTGTGGAGGAGGACCACTCAGGAATCTGAAT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGTCAAAAGGACATGGTTaGACTATGACCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWSKGHG*TMTTSR
Trigger: TCTGGAAGTGGTCATAGTCCAACCATGTCCTTTTGA...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp CTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTGAAAGGGGCCACACACTTAACTTaGAAGGGAACATCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LHVGTQCLVAGHTLNLKGATHLT*KGTSLH
Trigger: GTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGC...CCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR TCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATCACTTGGGAATCGCTaGTTGCATTCACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGSLGNR*LHSQNQ
Trigger: CTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACCTTGTTCCCTTCGCTaGTGTGGCAATAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGPCSLR*CGNRVR
Trigger: TCTTACTCTATTGCCACAGCAGCGAAGGGAACAAGG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATCACAAATCCGGCATTaGCATTTACCCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGSQIRH*HLPLGE
Trigger: TTCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCPDTHV*PPLRNE
Trigger: TTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTGAACGCAGTGTCTTGTaGCAGGCCACACACTTAACT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAERSVL*QATHLT
Trigger: AGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTC...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGGCTTTGAAAAACACATaGAGGCAGCCTAGTATAATG +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWALKNT*RQPSIM
Trigger: CATTATACTAGGCTGCCTCCATGTGTTTTTCAAAGC...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCACAAGCAAAGGAGCTaGAGAAAGGTCCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAHKQRS*RKVHVV
Trigger: CACTACATGGACCTTTCTTCAGCTCCTTTGCTTGTG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATTACTACAGCGAGGATaGAGGAAGAAGCATCCAATC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLLQRG*RKKHPI
Trigger: GATTGGATGCTTCTTCCTTCATCCTCGCTGTAGTAA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGTTTGAGACCAGCCTaGCCAACATGGAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSSLRPA*PTWRDP
Trigger: GGGGTCTCTCCATGTTGGTCAGGCTGGTCTCAAACT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGATCGATCTAGTCTATTaGATCACATGCATAAGATGC +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWIDLVY*ITCIRC
Trigger: GCATCTTATGCATGTGATTCAATAGACTAGATCGAT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGCATGATCACATGGCATaGAATGAACATTTACATGCT +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWHDHMA*NEHLHA
Trigger: AGCATGTAAATGTTCATTTCATGCCATGTGATCATG...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACCTCGGAGAACTATTTaGCGGGGAATGATCAATAAC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGPRRTI*RGMINN
Trigger: GTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCCGGGAGGTGGCGGTTaGAGTCAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTPGGGG*SQPRSC
Trigger: GCACGATCTTGGCTGACTGCAACCGCCACCTCCCGG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTTTCTCCACTTCAACATGGCGGGCTAGACGAGCCAGAGTTAAAGCAACTTTATTTCTCCACTTCAACATaGCGGGCTAGACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VSPLQHGGLDEPELKQLYFSTST*RARRAR
Trigger: TCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAA...ATAAAGTTGCTTTAACTCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370711.9
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAGIFSH*STHSLA
Trigger: AGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCC...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTTCCACAATTAATTGTGCCTGTTTTGAGTCCTGGCATTTTTAGCCACTGGTCCCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: VPQLIVPVLSPGIFSHWSPDTHV*PPLRNE
Trigger: TTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGG...GGACCAGTGGCTAAAAATGCCAGGACTCAAAACAGGCACAATTAATTGTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTCCAGACATATGCTTTaGACACTCCTCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFASRHML*TLLLSA
Trigger: AGCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATATAAATCTTACAGTTaGGCGGAGGCTTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGYKSYS*AEASNW
Trigger: CCAATTGGAAGCCTCCGCTCAACTGTAAGATTTATA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTTGCTCCCATTTTGTaGGCTCCTGCAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAFAPIL*APADVF
Trigger: AAACACATCTGCAGGAGCTCACAAAATGGGAGCAAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGAAGGCCATCTTGGTaGAAGGCCCAGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSRRPSW*KAQLTV
Trigger: CACTGTAAGCTGGGCCTTTCACCAAGATGGCCTTCT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAAGGTCTCTCACCACTaGGTTCTCCAGTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSKVSHH*VLQWQV
Trigger: GACTTGCCACTGGAGAACTCAGTGGTGAGAGACCTT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCACACACAGTCTTGCTaGTTCTGTATCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAHTQSC*FCIRMS
Trigger: GGACATTCTGATACAGAAGCAGCAAGACTGTGTGTG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCCTCGGAGAACTATTTaGCGGGGAATGATCAATAAC +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAPRRTI*RGMINN
Trigger: GTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCGGTGCTGTCTCCTCTTaGCCTGCCCCCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIGAVSS*PAPTSA
Trigger: AGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCACC...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp AAATGGGCAGTGAGCTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACAGATGGGAAAGATATTaGATGTGCAATTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: KWAVSSMWERSVLWQATHRWERY*MCNSFV
Trigger: AACAAAGGAATTGCACATCCAATATCTTTCCCATCT...GTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAGCTCACTGCCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCTCTGGAGATAGAGGATaGCATCCCGTCCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSSGDRG*HPVHAV
Trigger: CACAGCATGGACGGGATGCCATCCTCTATCTCCAGA...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGTTGGCTGGGGTCAGATaGCTGCCCTTTGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPELAGVR*LPFVIS
Trigger: GCTGATGACAAAGGGCAGCCATCTGACCCCAGCCAA...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGGGGCCTTCAGCTGGTaGGTTTGGTTGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTGAFSW*VWLERR
Trigger: TCTCCTTTCCAACCAAACCCACCAGCTGAAGGCCCC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAATGGGGCCTTCAGCTaGTGGGTTTGGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSNGAFS*WVWLER
Trigger: CCTTTCCAACCAAACCCACCAGCTGAAGGCCCCATT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGCTGTGTTTAGTGACTTaGGGAAACGTTTTTATTTCA +
Preference number: 4 (lower is better)
Translates to: VIPATREAETELLEPGRWLCLVT*GNVFIS
Trigger: TGAAATAAAAACGTTTCCCCAAGTCACTAAACACAG...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTGTAATGGTCCTTCACTaGCAAACTGAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAVMVLH*QTECRL
Trigger: AAGACGACATTCAGTTTGTCAGTGAAGGACCATTAC...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCACAAGCAAAGGAGCTaGAGAAAGGTCCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCHKQRS*RKVHVV
Trigger: CACTACATGGACCTTTCTTCAGCTCCTTTGCTTGTG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTCACTTGGGAATCGCTaGTTGCATTCACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCSLGNR*LHSQNQ
Trigger: CTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAACCCATTGTGTTTGCTaGGAAAACATGCTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGTHCVC*ENMLFY
Trigger: GTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTTTCAGATCCAAAATaGGCCACACTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAFSDPK*ATLGFC
Trigger: ACAGAAACCCAGTGTGGCTCATTTTGGATCTGAAAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTATAAATCTTACAGTTaGGCGGAGGCTTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAYKSYS*AEASNW
Trigger: CCAATTGGAAGCCTCCGCTCAACTGTAAGATTTATA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGATGTCCCAAGGAACTaGGGAGTTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTDVPRN*GVLTWP
Trigger: AGGCCAAGTGAGAACTCCTCAGTTCCTTGGGACATC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGGAGGATTCAGATTCCTaGGTGGTCCTCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEEDSDS*VVLLHT
Trigger: AGTGTGGAGGAGGACCACTCAGGAATCTGAATCCTC...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGGTTTCTCTCAGCAGTaGAGTCTCCTCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYGFSQQ*SLLLLG
Trigger: ACCCAAGAGGAGGAGACTTCACTGCTGAGAGAAACC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAGCTTATGATTTTGGGTaGTGGTTTCATCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGAYDFG*WFHPQR
Trigger: TCTTTGTGGATGAAACCAGCACCCAAAATCATAAGC...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAACATGCTTTTCTACTaGATCTTCACTTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGNMLFY*IFTWES
Trigger: CGATTCCCAAGTGAAGATGCAGTAGAAAAGCATGTT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTGCCGAACATAAACTaGAGCGAAACCACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFALPNIN*SETTVF
Trigger: GAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATTGATTACATACTGCTaGTCCTCCTCATCACTCTTT +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLITYC*SSSSLF
Trigger: AAAGAGTGATGAGGAGGAGCAGCAGTATGTAATCAA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATCTCTGGCAACAAGGTaGTGTCTCCTCTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATSLATR*CLLLPC
Trigger: GCAGGGCAAGAGGAGACAGCACCTTGTTGCCAGAGA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCCTCTCAAGAGTGCCTTaGAATCAGCACAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSLSRVP*NQHRAC
Trigger: ACAGGCTCTGTGCTGATTGCAAGGCACTCTTGAGAG...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGGTTTGCACTGTGACTaGAGCTGCGTACCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYGLHCD*SCVPLV
Trigger: CACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTAATTTCTCTGCAACCTaGGTAATGCTCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFANFSAT*VMLFSA
Trigger: AGCTGAGAAGAGCATTACCCAGGTTGCAGAGAAATT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAAGCAATGTTTTCTATaGAAATGCTGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGKQCFL*KCCCAL
Trigger: GAGTGCACAGCAGCATTTCCATAGAAAACATTGCTT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTAACTACTCTTCTTTCTaGAATGCCTCTTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFANYSSF*NASFAP
Trigger: GGGAGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAATAACCTCTTAATATaGATTTCTCTGCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGNNLLI*ISLQPG
Trigger: CCCAGGTTGCAGAGAAATTCATATTAAGAGGTTATT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGCACTCTCAGGATCATaGAATGCTTTGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYALSGS*NALVQV
Trigger: CACCTGCACCAAAGCATTTCATGATCCTGAGAGTGC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp ACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTGAAAGGGAACATCTTTGCACTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCT +
Preference number: 4 (lower is better)
Translates to: TQCLVAGHTLNLKGNIFALFKAT*CCVVIS
Trigger: AGATATTACCACACAACATCAAGTGGCCTTGAAGAG...TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTTTGCTCCCATTTTGTaGGCTCCTGCAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCFAPIL*APADVF
Trigger: AAACACATCTGCAGGAGCTCACAAAATGGGAGCAAA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTGGTGTTTCCTCCTTaGAAGCCCCAAATAAATGTT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFALVFPP*KPQINV
Trigger: AACATTTATTTGGGGCTTTCAAGGAGGAAACACCAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGGTGGTTTGCACTGTaGCTGCAGCTGCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGWFAL*LQLRTF
Trigger: AAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCACACACAGTCTTGCTaGTTCTGTATCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCHTQSC*FCIRMS
Trigger: GGACATTCTGATACAGAAGCAGCAAGACTGTGTGTG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTTTTGTCCTAAGAGAAGGTaGCCATTGTCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: KIGFPDTHVWPPLRNELFCPKRR*PLSNSL
Trigger: CAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACA...AAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAGAAAGGGAACATCTTTaGACAGAGAGATCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGEREHL*TERSKV
Trigger: AACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTC...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATTGTTAACTCCTTTTTaGATGTCCGACACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLLTPF*MSDTRK
Trigger: TTTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTATGAAACTTGTGGCTTaGCAAAGACATGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCMKLVA*QRHAVL
Trigger: CAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCAT...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCACTTGATTACATACTaGTGCTCCTCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCHLITY*CSSSSL
Trigger: GAGTGATGAGGAGGAGCAGCAGTATGTAATCAAGTG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATGGTGGTATCAGATATaGTATTTAACAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGWWYQI*YLTRHT
Trigger: TGTGTGCCTTGTTAAATAGCATATCTGATACCACCA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTCTCTGGCAACAAGGTaGTGTCTCCTCTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISSLATR*CLLLPC
Trigger: GCAGGGCAAGAGGAGACAGCACCTTGTTGCCAGAGA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCGCTAGCAGCTCGGGCTaGAATGGAGGCAGCGTGGTA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFASSSG*NGGSVV
Trigger: TACCACGCTGCCTCCATTGCAGCCCGAGCTGCTAGC...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTCCTCTTGGGTGGTTTaGACTGTGACTGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTSSWVV*TVTAAA
Trigger: CGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISPDTHV*PPLRNE
Trigger: TTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGG...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCCAGACACCCACGTGTaGCCTCCTCTTCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTPDTHV*PPLRNE
Trigger: TTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGAACGCAGTGTCTTGTaGCAGGCCACACACTTAACT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYERSVL*QATHLT
Trigger: AGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGCAGTGAGCTCCATGTaGGAACGCAGTGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTAVSSM*ERSVLW
Trigger: CCACAAGACACTGCGTTCCCACATGGAGCTCACTGC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCGCTAGAGCACATTTCTaGGCGATGATTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSARAHF*AMILRG
Trigger: TCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGC...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp CAAAGCTTCATGGCTGATTCTGAAGTCTCACAGAGCTaGATAGTAGTACGGACTCTTGGTGAGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: QSFMADSEVSQS*IVVRTLGELTI
Trigger: GATGGTCAACTCACCAAGAGTCCGTACTACTATCAAGCTCTGTGAGACTTCAGAATCAGCCATGAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp GTTTCTCCACTTCAACATGGCGGGCTAGACGAGCCAGAGTTAAAGCAACTTTATGTAATGGTCCTTCACTaGCAAACTGAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VSPLQHGGLDEPELKQLYVMVLH*QTECRL
Trigger: AAGACGACATTCAGTTTGTCAGTGAAGGACCATTAC...ATAAAGTTGCTTTAACTCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370711.9
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGCACTCTCAGGATCATaGAATGCTTTGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATALSGS*NALVQV
Trigger: CACCTGCACCAAAGCATTTCATGATCCTGAGAGTGC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCCTTGTTCCCTTCGCTaGTGTGGCAATAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYPCSLR*CGNRVR
Trigger: TCTTACTCTATTGCCACAGCAGCGAAGGGAACAAGG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATTTGCTGAGAAAACATaGTTTTCTACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGFAEKT*FSTASS
Trigger: TGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAAA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTCACAAATCCGGCATTaGCATTTACCCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYSQIRH*HLPLGE
Trigger: TTCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTCTCCACTTCAACATaGCGGGCTAGACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTFSTST*RARRAR
Trigger: TCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTCTCCACTTCAACATaGCGGGCTAGACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIFSTST*RARRAR
Trigger: TCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTCTCCACTTCAACATaGCGGGCTAGACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFSTST*RARRAR
Trigger: TCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TCCTTGTTACAGTGCATTATAGGACATAAAATTGGTTTCCCAGACACCCACGTGGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLQCIIGHKIGFPDTHVGIFSH*STHSLA
Trigger: AGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCC...CACGTGGGTGTCTGGGAAACCAATTTTATGTCCTATAATGCACTGTAACAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTAATTGTTGGATCACATaGAGAGTGATCGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFANCWIT*RVIEPF
Trigger: AAAAGGTTCGATCACTCTCCATGTGATCCAACAATT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAAGAAGGAAGCAATTTaGACATGCAAAACACTGAAT +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGKKEAI*TCKTLN
Trigger: ATTCAGTGTTTTGCATGTCCAAATTGCTTCCTTCTT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCACTGTCACATTCTTTaGTGGTATCAGATATGCTAT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAHCHIL*WYQICY
Trigger: ATAGCATATCTGATACCACCAAAGAATGTGACAGTG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTATTGAAGTATTTTTaGCACCCATGTTATCATCAC +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLLKYF*HPCYHH
Trigger: GTGATGATAACATGGGTGCCAAAAATACTTCAATAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAACTAAAAGCACAATGTaGTCATTTCGGAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGTKSTM*SFRKDD
Trigger: ATCATCTTTCCGAAATGACCACATTGTGCTTTTAGT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCAGCTCGGGCTGCAATaGAGGCAGCGTGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFQLGLQ*RQRGKT
Trigger: GGTTTTACCACGCTGCCTCCATTGCAGCCCGAGCTG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGCGGAGGCTTCCAATTaGTGTTTCCTCCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATAEASN*CFLLES
Trigger: GCTTTCAAGGAGGAAACACCAATTGGAAGCCTCCGC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370706.9
3UTR CAA 72 bp AAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTaGTGTAGAATCTCTGGCAACAAGGTGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLLNRASVSITP*CRISGNKVLSP
Trigger: AGGAGACAGCACCTTGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTTCCACAATTAATTGTGCCTGTTTTGAGTCCTGGCATTTTTAGCCACTGGTCCGGATCACATGGAGAGTaGTCGAACCTTTTCAAATGT +
Preference number: 4 (lower is better)
Translates to: VPQLIVPVLSPGIFSHWSGSHGE*SNLFKC
Trigger: ACATTTGAAAAGGTTCGATCACTCTCCATGTGATCC...GGACCAGTGGCTAAAAATGCCAGGACTCAAAACAGGCACAATTAATTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR TCA 90 bp TCAAATGTCCTAAGAGAAGGTGCCCATTGTCAAACTCCTTGTTACAGTGCATTACACAAGCAAAGGAGCTaGAGAAAGGTCCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: SNVLREGAHCQTPCYSALHKQRS*RKVHVV
Trigger: CACTACATGGACCTTTCTTCAGCTCCTTTGCTTGTG...TAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTCCAGACATATGCTTTaGACACTCCTCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYSRHML*TLLLSA
Trigger: AGCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTACCCATTGTGTTTGCTaGGAAAACATGCTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCTHCVC*ENMLFY
Trigger: GTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGT...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTCATGTGTAAACGAATaGCCCCTGAATCATCACATA +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCSCVNE*PLNHHI
Trigger: TATGTGATGATTCAGGGGTCATTCGTTTACACATGA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCTATTTGCCGGGGAATaGTCAATAACAGTAATAGCT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCLFAGE*SITVIA
Trigger: AGCTATTACTGTTATTGATCATTCCCCGGCAAATAG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTGCAGGTGCCACACTTaGTTACATACTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISCRCHT*LHTAAP
Trigger: AGGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTGCAGGTGCCACACTTaGTTACATACTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTCRCHT*LHTAAP
Trigger: AGGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGCACTCTCAGGATCATaGAATGCTTTGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTALSGS*NALVQV
Trigger: CACCTGCACCAAAGCATTTCATGATCCTGAGAGTGC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTACTACAGCGAGGATaGAGGAAGAAGCATCCAATC +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLLQRG*RKKHPI
Trigger: GATTGGATGCTTCTTCCTTCATCCTCGCTGTAGTAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTCACATTTCTGGGCGATaGTTCTCAGAGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFHISGR*FSEDGT
Trigger: GGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTG...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCTTCAAATGTCAGCTGTaGTCATTCCAGACATGCATC +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSFKCQL*SFQTCI
Trigger: GATGCATGTCTGGAATGATCACAGCTGACATTTGAA...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCGATTTGAATTCCAGTTaGCACAAAGCTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSDLNSS*HKASWL
Trigger: CAGCCATGAAGCTTTGTGTCAACTGGAATTCAAATC...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGACATGGTTGGACTATaGCCACTTCCAGATATATCC +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTDMVGL*PLPDIS
Trigger: GGATATATCTGGAAGTGGTCATAGTCCAACCATGTC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGTCCCAGGCAGGAAGATaGCAATTAAACACACGGATA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTSQAGR*QLNTRI
Trigger: TATCCGTGTGTTTAATTGTCATCTTCCTGCCTGGGA...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTAAATTCAGTCACATGTaGCATGATAGTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAKFSHM*HDSIFP
Trigger: AGGAAAGATACTATCATGGCACATGTGACTGAATTT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCCTCGGAGAACTATTTaGCGGGGAATGATCAATAAC +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYPRRTI*RGMINN
Trigger: GTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATCACAAATCCGGCATTaGCATTTACCCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATSQIRH*HLPLGE
Trigger: TTCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTCAAATACATAATCTATaGTGTGGTGCTCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAQIHNL*CGAPHN
Trigger: ATTATGAGGAGCACCACAGCATAGATTATGTATTTG...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCTGGGGTCAGATGGCTaGCCTTTGTCATCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLGSDG*PLSSAD
Trigger: ATCAGCTGATGACAAAGGGCAGCCATCTGACCCCAG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCACTGTGACTGCAGCTaGGTACCTTTGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTHCDCS*VPLVVS
Trigger: TGATACCACCAAAGGTACGCAGCTGCAGTCACAGTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTAAGAAGGAAGCAATTTaGACATGCAAAACACTGAAT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAKKEAI*TCKTLN
Trigger: ATTCAGTGTTTTGCATGTCCAAATTGCTTCCTTCTT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTACTAAAAGCACAATGTaGTCATTTCGGAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: ALPPHLLNYSSFWNASFATKSTM*SFRKDD
Trigger: ATCATCTTTCCGAAATGACCACATTGTGCTTTTAGT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCATGATTCTCAGAGGATaGCACCTTAGATTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSMILRG*HLRFRH
Trigger: ATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCAT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTGAGGCCAAAGATTCTTaGGGGACCAGAAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTEAKDS*GTRSGD
Trigger: ATCTCCACTTCTGGTCCCCCAAGAATCTTTGGCCTC...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTGCTGGTGGGTTTGGTTaGAAAGGAGAGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFAGGFG*KGEVSL
Trigger: CAAGGACACCTCTCCTTTCCAACCAAACCCACCAGC...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGAGAAACAGAGCTGTGTaGCTTGTTCTCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTRNRAV*LVLFTT
Trigger: TGTGGTGAAGAGAACAAGCCACACAGCTCTGTTTCT...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGACTGTGCAACAACTGTaGCAAGAACAGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPETVQQL*QEQKPH
Trigger: ATGTGGCTTCTGTTCTTGCCACAGTTGTTGCACAGT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAACAGTGCGAGACTGTaGCAAAATATGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSNSARL*QNMPHI
Trigger: TATGTGAGGCATATTTTGCCACAGTCTCGCACTGTT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGGAGGCCAAGGTAGGTaGATCACAAGGTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLGGQGR*ITRFRR
Trigger: TCTCCTGAACCTTGTGATCCACCTACCTTGGCCTCC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGCGGAGGCTTCCAATTaGTGTTTCCTCCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTAEASN*CFLLES
Trigger: GCTTTCAAGGAGGAAACACCAATTGGAAGCCTCCGC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
3UTR CAA 72 bp AAATGTTTAGAAGGTAGGTTGTTTAAGAAGGCCATCTaGGTGAAAGGCCCAGCTTACAGTGAGAGACTACCA +
Preference number: 4 (lower is better)
Translates to: KCLEGRLFKKAI*VKGPAYSERLP
Trigger: TGGTAGTCTCTCACTGTAAGCTGGGCCTTTCACCAAGATGGCCTTCTTAAACAACCTACCTTCTAAACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGTAATGGTCCTTCACTaGCAAACTGAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYVMVLH*QTECRL
Trigger: AAGACGACATTCAGTTTGTCAGTGAAGGACCATTAC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCACAAGCAAAGGAGCTaGAGAAAGGTCCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTHKQRS*RKVHVV
Trigger: CACTACATGGACCTTTCTTCAGCTCCTTTGCTTGTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATCCAGACATATGCTTTaGACACTCCTCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATSRHML*TLLLSA
Trigger: AGCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGCCACACACTTAACTTaGAAGGGAACATCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATATHLT*KGTSLH
Trigger: GTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCCTGAATTCTGCTTATaGTTTTGGGTGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYPEFCL*FWVLVS
Trigger: TGAAACCAGCACCCAAAATCATAAGCAGAATTCAGG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGGCAATGCACTCCAGTaGGCTAGATTCTTTAATAGA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYGNALQ*ARFFNR
Trigger: TCTATTAAAGAATCTAGCTCACTGGAGTGCATTGCC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTCACTTGGGAATCGCTaGTTGCATTCACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTSLGNR*LHSQNQ
Trigger: CTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCAATGTTGTAGAGGATaGTGGCAAAGTTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYQCCRG*WQSFTF
Trigger: GAAGGTGAAACTTTGCCATCATCCTCTACAACATTG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGCACAGCTGTATCTATaGAACTTGTGGCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATAQLYL*NLWLAK
Trigger: TTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTTTCAGATCCAAAATaGGCCACACTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYFSDPK*ATLGFC
Trigger: ACAGAAACCCAGTGTGGCTCATTTTGGATCTGAAAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTATAAATCTTACAGTTaGGCGGAGGCTTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYYKSYS*AEASNW
Trigger: CCAATTGGAAGCCTCCGCTCAACTGTAAGATTTATA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATTACTACAGCGAGGATaGAGGAAGAAGCATCCAATC +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATLLQRG*RKKHPI
Trigger: GATTGGATGCTTCTTCCTTCATCCTCGCTGTAGTAA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGAAAACCTACAACCCATaGCCTCCATTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTKTYNP*PPFLLR
Trigger: CCTCAAAAGAAATGGAGGTCATGGGTTGTAGGTTTT...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCGCAAATAATACTAGGTaGTGTATTCAGACCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSANNTR*CIQTPQ
Trigger: TTGAGGGGTCTGAATACATCACCTAGTATTATTTGC...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGACCCAACAGACCATTTaGAATAGGTTACCTCAACCA +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPETQQTI*NRLPQP
Trigger: TGGTTGAGGTAACCTATTTCAAATGGTCTGTTGGGT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp TCAAATGTCCTAAGAGAAGGTGCCCATTGTCAAACTCCTTGTTACAGTGCATTAGTCCACACACAGTCTTaGTGCTTCTGTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: SNVLREGAHCQTPCYSALVHTQS*CFCIRM
Trigger: CATTCTGATACAGAAGCAGCAAGACTGTGTGTGGAC...TAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTTCTTTCCAGACATATaGTTTGAACACTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCFFPDI*FEHSSF
Trigger: AAAGGAGGAGTGTTCAAAGCATATGTCTGGAAAGAA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCCTTGTTCCCTTCGCTaGTGTGGCAATAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIPCSLR*CGNRVR
Trigger: TCTTACTCTATTGCCACAGCAGCGAAGGGAACAAGG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTGGGAATCGCTGATTaGATTCACAGAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLGIAD*IHRTRF
Trigger: AAACCTGGTTCTGTGAATGCAATCAGCGATTCCCAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTTGTTAACTCCTTTTTaGATGTCCGACACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCLLTPF*MSDTRK
Trigger: TTTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTTCTATGGAAATGCTaGTGTGCACTCTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYFLWKC*CALSGS
Trigger: TGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTATGGTGAAAGGAATTTaGTTGGGTAGTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCMVKGI*LGSCSS
Trigger: AGATGAACAACTACCCAAGCAAATTCCTTTCACCAT...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCTATCCTTTCTGGACTaGTGGAACAACTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTLSFLD*WNNSQR
Trigger: TCTCTGGGAGTTGTTCCAGCAGTCCAGAAAGGATAG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGTTAGGAGTTCAGATTTaGATGCCTGGATCGTGTAAC +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPELGVQI*MPGSCN
Trigger: GTTACACGATCCAGGCATGCAAATCTGAACTCCTAA...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGGGAGCTGCGCAACAATaGAAATATAGTCAACACTAC +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEGAAQQ*KYSQHY
Trigger: GTAGTGTTGACTATATTTGCATTGTTGCGCAGCTCC...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISGIFSH*STHSLA
Trigger: AGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCC...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGCATTTTTAGCCACTaGTCCACACACAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGIFSH*STHSLA
Trigger: AGCAAGACTGTGTGTGGACCAGTGGCTAAAAATGCC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp ATAAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTAATTGTTGGATCACATaGAGAGTGATCGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: IKLVSQTPTCGLLFGMNFNCWIT*RVIEPF
Trigger: AAAAGGTTCGATCACTCTCCATGTGATCCAACAATT...AAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR CCA 90 bp ATAAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTTATGTCCATCATCTGTaGCTTCCTTATCAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: IKLVSQTPTCGLLFGMNFYVHHL*LPYQKG
Trigger: ACCTTTTTGATAAGGAAGCCACAGATGATGGACATA...AAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR CCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATAATTTCTCTGCAACCTaGGTAATGCTCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYNFSAT*VMLFSA
Trigger: AGCTGAGAAGAGCATTACCCAGGTTGCAGAGAAATT...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTACTGCATCTTCACTTaGGAATCGCTGATTGCATTC +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYYCIFT*ESLIAF
Trigger: GAATGCAATCAGCGATTCCCAAGTGAAGATGCAGTA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTAGAACTAATGCTATTTaGGAAACAACTGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCRTNAI*ETTVKS
Trigger: GCTCTTGACAGTTGTTTCCCAAATAGCATTAGTTCT...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCCTGTGAAACTAGATTaGCTGGGGTCAGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFPVKLD*LGSDGC
Trigger: GCAGCCATCTGACCCCAGCCAATCTAGTTTCACAGG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGATGAAGGAAGAAGGATaGCAATCAGCAGGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPEMKEEG*QSAGSL
Trigger: TAAAGACCCTGCTGATTGCCATCCTTCTTCCTTCAT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTTCAGCTGGTGGGTTTaGTTGGAAAGGAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFFSWWV*LERRGV
Trigger: GACACCTCTCCTTTCCAACCAAACCCACCAGCTGAA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCTAATGCTTCTACAATaGGGCCTTCAGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLMLLQ*GLQLVG
Trigger: ACCCACCAGCTGAAGGCCCCATTGTAGAAGCATTAG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCCATCAAAGGGCAAGTaGGAGATCTTCTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLPSKGK*EIFSWV
Trigger: AACCCAGGAGAAGATCTCCCACTTGCCCTTTGATGG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTGTACCCATGGCGTTCTaGAGAGTCTCCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFVPMAF*RVSLLS
Trigger: AGAAAGAAGGGAGACTCTCCAGAACGCCATGGGTAC...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp ATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTaGCTCCCATTTTGTGAGCTCCTGCAGATGTGTTTA +
Preference number: 4 (lower is better)
Translates to: ICLTTLLSGMPL*LPFCELLQMCL
Trigger: TAAACACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
3UTR CAA 72 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTaGTTTACAGTACCTGAGAGGTTATCCTGGATGTAT +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTS*FTVPERLSWMY
Trigger: ATACATCCAGGATAACCTCTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGTAATGGTCCTTCACTaGCAAACTGAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATVMVLH*QTECRL
Trigger: AAGACGACATTCAGTTTGTCAGTGAAGGACCATTAC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGCCACACACTTAACTTaGAAGGGAACATCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTATHLT*KGTSLH
Trigger: GTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGGCAATGCACTCCAGTaGGCTAGATTCTTTAATAGA +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATGNALQ*ARFFNR
Trigger: TCTATTAAAGAATCTAGCTCACTGGAGTGCATTGCC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGCACAGCTGTATCTATaGAACTTGTGGCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTAQLYL*NLWLAK
Trigger: TTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGCACAGCTGTATCTATaGAACTTGTGGCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTAQLYL*NLWLAK
Trigger: TTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATTTTCAGATCCAAAATaGGCCACACTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATFSDPK*ATLGFC
Trigger: ACAGAAACCCAGTGTGGCTCATTTTGGATCTGAAAA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACACTCTTCAAGGCCACTTaGTGTTGTGTGGTAATATCT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATLFKAT*CCVVIS
Trigger: AGATATTACCACACAACATCAAGTGGCCTTGAAGAG...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTGAAGATCTGTCAAACTaGAGCCTGAACAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTEDLSN*SLNKEA
Trigger: TGCTTCCTTGTTCAGGCTTCAGTTTGACAGATCTTC...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCTCAGTCTTACAGCTTaGTACGAGAGCTTGATAGGT +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTLSLTA*YESLIG
Trigger: ACCTATCAAGCTCTCGTATCAAGCTGTAAGACTGAG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGCTGACTAAGAGTTTCTaGTTCTATTGGGGTAATCTC +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPELTKSF*FYWGNL
Trigger: GAGATTACCCCAATAGAATCAGAAACTCTTAGTCAG...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTACTGTCCAAGTAGCCTaGAAGAGTTTATGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTTVQVA*KSLCSL
Trigger: AAGGGAGCATAAACTCTTTCAGGCTACTTGGACAGT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGAAAACAGTACAACTTaGGAGATCTCCAAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTENSTT*EISKVL
Trigger: TAGGACTTTGGAGATCTCTCAAGTTGTACTGTTTTC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTCCTGGACTAACACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFPGLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGTTAGTCCAGG...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGGCTCAGAAAACAAGTaGCTTGCTAATGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLGSENK*LANAEG
Trigger: ACCCTCAGCATTAGCAAGTCACTTGTTTTCTGAGCC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTGGTGTTTCCTCCTTaGAAGCCCCAAATAAATGTT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLVFPP*KPQINV
Trigger: AACATTTATTTGGGGCTTTCAAGGAGGAAACACCAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCACACACAGTCTTGCTaGTTCTGTATCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTHTQSC*FCIRMS
Trigger: GGACATTCTGATACAGAAGCAGCAAGACTGTGTGTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp ACACACAGTCTTGCTGCTTCTGTATCAGAATGTCCTCGAATAAATTCCAATTCTCACACACAGTCTTGCTaGTTCTGTATCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: THSLAASVSECPRINSNSHTQSC*FCIRMS
Trigger: GGACATTCTGATACAGAAGCAGCAAGACTGTGTGTG...AGAATTGGAATTTATTCGAGGACATTCTGATACAGAAGCAGCAAGACTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR GCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGTCCACACACAGTCTTaGTGCTTCTGTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTVHTQS*CFCIRM
Trigger: CATTCTGATACAGAAGCAGCAAGACTGTGTGTGGAC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGTCCACACACAGTCTTaGTGCTTCTGTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTVHTQS*CFCIRM
Trigger: CATTCTGATACAGAAGCAGCAAGACTGTGTGTGGAC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATGTCCTAAGAGAAGGTaGCCATTGTCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTCPKRR*PLSNSL
Trigger: CAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTGTCCTAAGAGAAGGTaGCCATTGTCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTCPKRR*PLSNSL
Trigger: CAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGCTTATGATTTTGGGTaGTGGTTTCATCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYAYDFG*WFHPQR
Trigger: TCTTTGTGGATGAAACCAGCACCCAAAATCATAAGC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATAACATGCTTTTCTACTaGATCTTCACTTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYNMLFY*IFTWES
Trigger: CGATTCCCAAGTGAAGATGCAGTAGAAAAGCATGTT...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTAAATTCAGTCACATGTaGCATGATAGTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCKFSHM*HDSIFP
Trigger: AGGAAAGATACTATCATGGCACATGTGACTGAATTT...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCATGAAACTTGTGGCTTaGCAAAGACATGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIMKLVA*QRHAVL
Trigger: CAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCAT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATGAAACTTGTGGCTTaGCAAAGACATGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTMKLVA*QRHAVL
Trigger: CAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTGATTACATACTGCTaGTCCTCCTCATCACTCTTT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLITYC*SSSSLF
Trigger: AAAGAGTGATGAGGAGGAGCAGCAGTATGTAATCAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACACTTGATTACATACTaGTGCTCCTCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTHLITY*CSSSSL
Trigger: GAGTGATGAGGAGGAGCAGCAGTATGTAATCAAGTG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCACTTGATTACATACTaGTGCTCCTCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTHLITY*CSSSSL
Trigger: GAGTGATGAGGAGGAGCAGCAGTATGTAATCAAGTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGCGGAGGCTTCCAATTaGTGTTTCCTCCTATATTCT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTAEASN*CFLLYS
Trigger: AGAATATAGGAGGAAACACCAATTGGAAGCCTCCGC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357489.7
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCAAGGAGAGGTGTCCTTaGCCACAGGATATACCCTGT +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFKERCP*PQDIPC
Trigger: ACAGGGTATATCCTGTGGCCAAGGACACCTCTCCTT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGCTTTGTAGAGAACACTaGCATGGACCTATTTCTACA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTLCREH*HGPIST
Trigger: TGTAGAAATAGGTCCATGCCAGTGTTCTCTACAAAG...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGAACATCAAAAGGACATaGTTGGACTATGACCACTTC +
Preference number: 4 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPENIKRT*LDYDHF
Trigger: GAAGTGGTCATAGTCCAACCATGTCCTTTTGATGTT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCACATCAAAGCGATTATaGGAAGATCAGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSTSKRL*EDQTSF
Trigger: AAAGGATGTCTGATCTTCCCATAATCGCTTTGATGT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp GTTTCTCCACTTCAACATGGCGGGCTAGACGAGCCAGAGTTAAAGCAACTTTATAAAACAAATTTTCTGTaGTCATGTGGTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: VSPLQHGGLDEPELKQLYKTNFL*SCGSGT
Trigger: TGTTCCAGAACCACATGACCACAGAAAATTTGTTTT...ATAAAGTTGCTTTAACTCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370711.9
CDS-3UTR CCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGCTGCGTACCTTTGGTaGTATCAGATATGCTATTTA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYAAYLW*YQICYL
Trigger: TAAATAGCATATCTGATACCACCAAAGGTACGCAGC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGCAGCTGCGTACCTTTaGTGGTATCAGATATGCTAT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTAAAYL*WYQICY
Trigger: ATAGCATATCTGATACCACCAAAGGTACGCAGCTGC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTGTAATGGTCCTTCACTaGCAAACTGAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTVMVLH*QTECRL
Trigger: AAGACGACATTCAGTTTGTCAGTGAAGGACCATTAC...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGGATCACATGGAGAGTaGTCGAACCTTTTCAAATGT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTGSHGE*SNLFKC
Trigger: ACATTTGAAAAGGTTCGATCACTCTCCATGTGATCC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGATCACATGGAGAGTaGTCGAACCTTTTCAAATGT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGSHGE*SNLFKC
Trigger: ACATTTGAAAAGGTTCGATCACTCTCCATGTGATCC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATAATAACCTCTTAATATaGATTTCTCTGCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYNNLLI*ISLQPG
Trigger: CCCAGGTTGCAGAGAAATTCATATTAAGAGGTTATT...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCCTGAATTCTGCTTATaGTTTTGGGTGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIPEFCL*FWVLVS
Trigger: TGAAACCAGCACCCAAAATCATAAGCAGAATTCAGG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCGGCAATGCACTCCAGTaGGCTAGATTCTTTAATAGA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIGNALQ*ARFFNR
Trigger: TCTATTAAAGAATCTAGCTCACTGGAGTGCATTGCC...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCAATGTTGTAGAGGATaGTGGCAAAGTTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIQCCRG*WQSFTF
Trigger: GAAGGTGAAACTTTGCCATCATCCTCTACAACATTG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATTTTCTCTCTGTATGTaGGGCACTAGCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATFSLCM*GTSSKL
Trigger: AAGTTTACTGCTAGTGCCTCACATACAGAGAGAAAA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTGTGGGACATATAATTaGGGTATCTGCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFCGTYN*GICCQF
Trigger: GAACTGGCAGCAGATACCTCAATTATATGTCCCACA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACACCATATAGCTTTCTCTaGTGTTACACAGCGATTACA +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATPYSFL*CYTAIT
Trigger: TGTAATCGCTGTGTAACATCAGAGAAAGCTATATGG...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTCTTTCCAGACATATaGTTTGAACACTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYFFPDI*FEHSSF
Trigger: AAAGGAGGAGTGTTCAAAGCATATGTCTGGAAAGAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTGGGAATCGCTGATTaGATTCACAGAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNILGIAD*IHRTRF
Trigger: AAACCTGGTTCTGTGAATGCAATCAGCGATTCCCAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAAACATGCTTTTCTACTaGATCTTCACTTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATNMLFY*IFTWES
Trigger: CGATTCCCAAGTGAAGATGCAGTAGAAAAGCATGTT...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTGTTAACTCCTTTTTaGATGTCCGACACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLLTPF*MSDTRK
Trigger: TTTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTGCCGAACATAAACTaGAGCGAAACCACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNILPNIN*SETTVF
Trigger: GAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTGCCGAACATAAACTaGAGCGAAACCACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTLPNIN*SETTVF
Trigger: GAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTTTCTATGGAAATGCTaGTGTGCACTCTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISFLWKC*CALSGS
Trigger: TGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTTCTATGGAAATGCTaGTGTGCACTCTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIFLWKC*CALSGS
Trigger: TGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTGGTGGTATCAGATATaGTATTTAACAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYWWYQI*YLTRHT
Trigger: TGTGTGCCTTGTTAAATAGCATATCTGATACCACCA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGAGTTCAGATTTGCATaGCTGGATCGTGTAACATCC +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLEFRFA*LDRVTS
Trigger: GGATGTTACACGATCCAGGCATGCAAATCTGAACTC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTATGTCCATCATCTGTaGCTTCCTTATCAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYYVHHL*LPYQKG
Trigger: ACCTTTTTGATAAGGAAGCCACAGATGATGGACATA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTACTGCATCTTCACTTaGGAATCGCTGATTGCATTC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIYCIFT*ESLIAF
Trigger: GAATGCAATCAGCGATTCCCAAGTGAAGATGCAGTA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATACTGCATCTTCACTTaGGAATCGCTGATTGCATTC +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTYCIFT*ESLIAF
Trigger: GAATGCAATCAGCGATTCCCAAGTGAAGATGCAGTA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCAACTACTCTTCTTTCTaGAATGCCTCTTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNINYSSF*NASFAP
Trigger: GGGAGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTTCCACGATCAAATTCTaGGTCATGAACCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTSTIKF*VMNQIF
Trigger: GAAGATCTGGTTCATGACCCAGAATTTGATCGTGGA...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTTGGGAGATCTTCTCCTaGGTTTTCTTAGTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTWEIFS*VFLVRD
Trigger: ATCTCTCACTAAGAAAACCCAGGAGAAGATCTCCCA...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTGAGGGTCAAGGTCTTTaGAATTCAAATACCATGTGC +
Preference number: 4 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTEGQGL*NSNTMC
Trigger: GCACATGGTATTTGAATTCCAAAGACCTTGACCCTC...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp TCGAACCTTTTCAAATGTCCTAAGAGAAGGTGCCCATaGTCAAACTCCTTGTTACAGTGCATTATAGGACAT +
Preference number: 4 (lower is better)
Translates to: SNLFKCPKRRCP*SNSLLQCIIGH
Trigger: ATGTCCTATAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTTGAAAAGGTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCACCCATTGTGTTTGCTaGGAAAACATGCTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTTHCVC*ENMLFY
Trigger: GTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATCATGTGTAAACGAATaGCCCCTGAATCATCACATA +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTSCVNE*PLNHHI
Trigger: TATGTGATGATTCAGGGGTCATTCGTTTACACATGA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTCATGTGTAAACGAATaGCCCCTGAATCATCACATA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTSCVNE*PLNHHI
Trigger: TATGTGATGATTCAGGGGTCATTCGTTTACACATGA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACTATTTGCCGGGGAATaGTCAATAACAGTAATAGCT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTLFAGE*SITVIA
Trigger: AGCTATTACTGTTATTGATCATTCCCCGGCAAATAG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCTATTTGCCGGGGAATaGTCAATAACAGTAATAGCT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTLFAGE*SITVIA
Trigger: AGCTATTACTGTTATTGATCATTCCCCGGCAAATAG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTTCCTTTATCCAGCATaGTTTGGAGACATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISFLYPA*FGDICY
Trigger: ATAGCAGATGTCTCCAAATCATGCTGGATAAAGGAA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTCCTTTATCCAGCATaGTTTGGAGACATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFLYPA*FGDICY
Trigger: ATAGCAGATGTCTCCAAATCATGCTGGATAAAGGAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTTTCTCTCTGTATGTaGGGCACTAGCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTFSLCM*GTSSKL
Trigger: AAGTTTACTGCTAGTGCCTCACATACAGAGAGAAAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTTTCTCTCTGTATGTaGGGCACTAGCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFSLCM*GTSSKL
Trigger: AAGTTTACTGCTAGTGCCTCACATACAGAGAGAAAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGTCAAATTCTGGGTCATaGACCAGATCTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLSNSGS*TRSSMS
Trigger: AGACATGGAAGATCTGGTTCATGACCCAGAATTTGA...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTCACATGTAGCTTTATaGGTAGTGATGGTATGGTGG +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFSHVAL*VVMVWW
Trigger: CCACCATACCATCACTACTCATAAAGCTACATGTGA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGAAAGGGAACATCTTTaGACAGAGAGATCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATEREHL*TERSKV
Trigger: AACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTCCACAAAGACTTGATTaGAATCTGGACAATAACCTC +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISPQRLD*NLDNNL
Trigger: GAGGTTATTGTCCAGATTGCAATCAAGTCTTTGTGG...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCCACAAAGACTTGATTaGAATCTGGACAATAACCTC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTPQRLD*NLDNNL
Trigger: GAGGTTATTGTCCAGATTGCAATCAAGTCTTTGTGG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCGCTTATGATTTTGGGTaGTGGTTTCATCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIAYDFG*WFHPQR
Trigger: TCTTTGTGGATGAAACCAGCACCCAAAATCATAAGC...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCAAATACATAATCTATaGTGTGGTGCTCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYQIHNL*CGAPHN
Trigger: ATTATGAGGAGCACCACAGCATAGATTATGTATTTG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTGATTACATACTGCTaGTCCTCCTCATCACTCTTT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTLITYC*SSSSLF
Trigger: AAAGAGTGATGAGGAGGAGCAGCAGTATGTAATCAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATGGTGGTATCAGATATaGTATTTAACAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATWWYQI*YLTRHT
Trigger: TGTGTGCCTTGTTAAATAGCATATCTGATACCACCA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGAAGTTGCCAAAGGCCTaGATCCATACCATCAGATAT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLKLPKA*IHTIRY
Trigger: ATATCTGATGGTATGGATGCAGGCCTTTGGCAACTT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCTAGTAGTACAAAGTTaGCAAAGGCCTGCATCCATA +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLVVQS*QRPASI
Trigger: TATGGATGCAGGCCTTTGGCAACTTTGTACTACTAG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTAAGAGCACATGGGATTaGTTGATTGGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFKSTWD*LIGAIH
Trigger: GTGTATTGCACCAATCAAGCAATCCCATGTGCTCTT...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGAAGATAAAACTACAGTaGCAATATCAAGAGCACATG +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTKIKLQ*QYQEHM
Trigger: CATGTGCTCTTGATATTGGCACTGTAGTTTTATCTT...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGCATATTAAAGGGAAGTaGCAAAATCGTTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTHIKGK*QNRFRQ
Trigger: TTGTCTGAAACGATTTTGGCACTTCCCTTTAATATG...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGCCCTTAACAGTAAATaGTGTGATAGAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLALNSK*CDRATL
Trigger: AAGAGTGGCTCTATCACAGCATTTACTGTTAAGGGC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTAAGCAATGTTTTCTATaGAAATGCTGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISKQCFL*KCCCAL
Trigger: GAGTGCACAGCAGCATTTCCATAGAAAACATTGCTT...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAAGCAATGTTTTCTATaGAAATGCTGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTKQCFL*KCCCAL
Trigger: GAGTGCACAGCAGCATTTCCATAGAAAACATTGCTT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACAGCATGCATACATATaGCAAAATCAGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTQHAYI*QNQQHL
Trigger: AAGATGCTGCTGATTTTGCCATATGTATGCATGCTG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCAGCATGCATACATATaGCAAAATCAGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTQHAYI*QNQQHL
Trigger: AAGATGCTGCTGATTTTGCCATATGTATGCATGCTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTGGAAAACAGAGTATCTaGAGACACTTGGGCATATCA +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFGKQSI*RHLGIS
Trigger: TGATATGCCCAAGTGTCTCCAGATACTCTGTTTTCC...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCCTGAGAGGTTATCCTaGATGTATCAGGTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFPERLS*MYQVLK
Trigger: CTTAAGGACCTGATACATCCAGGATAACCTCTCAGG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTGTTATCACCCAGTTTaGAACTCTGATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISCYHPV*NSDGND
Trigger: ATCATTTCCATCAGAGTTTCAAACTGGGTGATAACA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTGTTATCACCCAGTTTaGAACTCTGATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNICYHPV*NSDGND
Trigger: ATCATTTCCATCAGAGTTTCAAACTGGGTGATAACA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTGTTATCACCCAGTTTaGAACTCTGATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTCYHPV*NSDGND
Trigger: ATCATTTCCATCAGAGTTTCAAACTGGGTGATAACA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR TCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCAATAACCTCTTAATATaGATTTCTCTGCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNINNLLI*ISLQPG
Trigger: CCCAGGTTGCAGAGAAATTCATATTAAGAGGTTATT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCATGCATCCAGTTTTTaGGATGATCTCCTACCTGTA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFHASSF*DDLLPV
Trigger: TACAGGTAGGAGATCATCTCAAAAACTGGATGCATG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCATGGATCTAAGGGCTaGTATACCATACATCCACTA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFHGSKG*YTIHPL
Trigger: TAGTGGATGTATGGTATATCAGCCCTTAGATCCATG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTCTTTCCAGACATATaGTTTGAACACTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTFFPDI*FEHSSF
Trigger: AAAGGAGGAGTGTTCAAAGCATATGTCTGGAAAGAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGAAAGGGAACATCTTTaGACAGAGAGATCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTEREHL*TERSKV
Trigger: AACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp ATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCGAAAGGGAACATCTTTaGACAGAGAGATCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: IEVFLAPMLSSLSHSEMGEREHL*TERSKV
Trigger: AACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTC...GCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCATGGTGAAAGGAATTTaGTTGGGTAGTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIMVKGI*LGSCSS
Trigger: AGATGAACAACTACCCAAGCAAATTCCTTTCACCAT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATGGTGAAAGGAATTTaGTTGGGTAGTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTMVKGI*LGSCSS
Trigger: AGATGAACAACTACCCAAGCAAATTCCTTTCACCAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCGCAATAATTTACATATaGATGGCACCCACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIAIIYI*MAPTKN
Trigger: GTTCTTTGTGGGTGCCATGCATATGTAAATTATTGC...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCCATTCCTGATGTCATaGTGTGAAGACATGGATCTA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFPFLMS*CEDMDL
Trigger: TAGATCCATGTCTTCACAGCATGACATCAGGAATGG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCCATCAATTACCACTGTaGAACAACTGTGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFHQLPL*NNCGKN
Trigger: GTTCTTGCCACAGTTGTTGCACAGTGGTAATTGATG...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTACACGGATATTAACATaGTTCCAAGACCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFTRILT*FQDLSE
Trigger: TTCTGACAGGTCTTGGAAGCATGTTAATATCCGTGT...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTAATTGTTGGATCACATaGAGAGTGATCGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISNCWIT*RVIEPF
Trigger: AAAAGGTTCGATCACTCTCCATGTGATCCAACAATT...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAATTGTTGGATCACATaGAGAGTGATCGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTNCWIT*RVIEPF
Trigger: AAAAGGTTCGATCACTCTCCATGTGATCCAACAATT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTATGTCCATCATCTGTaGCTTCCTTATCAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISYVHHL*LPYQKG
Trigger: ACCTTTTTGATAAGGAAGCCACAGATGATGGACATA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATATGTCCATCATCTGTaGCTTCCTTATCAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTYVHHL*LPYQKG
Trigger: ACCTTTTTGATAAGGAAGCCACAGATGATGGACATA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTATGATTTTGGGTGCTaGTTTCATCCACAAAGACTT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISYDFGC*FHPQRL
Trigger: AAGTCTTTGTGGATGAAACCAGCACCCAAAATCATA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTATGATTTTGGGTGCTaGTTTCATCCACAAAGACTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTYDFGC*FHPQRL
Trigger: AAGTCTTTGTGGATGAAACCAGCACCCAAAATCATA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACAACCACAAGTTAACTaGTTACTGGTCTCTATTACT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTQPQVN*LLVSIT
Trigger: AGTAATAGAGACCAGTAACCAGTTAACTTGTGGTTG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCAACCACAAGTTAACTaGTTACTGGTCTCTATTACT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIQPQVN*LLVSIT
Trigger: AGTAATAGAGACCAGTAACCAGTTAACTTGTGGTTG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCAACCACAAGTTAACTaGTTACTGGTCTCTATTACT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTQPQVN*LLVSIT
Trigger: AGTAATAGAGACCAGTAACCAGTTAACTTGTGGTTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCACTGTCACATTCTTTaGTGGTATCAGATATGCTAT +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIHCHIL*WYQICY
Trigger: ATAGCATATCTGATACCACCAAAGAATGTGACAGTG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACACTATTGAAGTATTTTTaGCACCCATGTTATCATCAC +
Preference number: 4 (lower is better)
Translates to: FLIEHQCPSHLCVESLATLLKYF*HPCYHH
Trigger: GTGATGATAACATGGGTGCCAAAAATACTTCAATAG...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCAGAACTAATGCTATTTaGGAAACAACTGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIRTNAI*ETTVKS
Trigger: GCTCTTGACAGTTGTTTCCCAAATAGCATTAGTTCT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCTTTCTGGTTCTCCAATaGGTTCTCAACAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFFLVLQ*VLNRGS
Trigger: ACTTCCTCTGTTGAGAACCCATTGGAGAACCAGAAA...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACAGGTAATCCAAATCTaGAAGCTCAACAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTQVIQI*KLNNFF
Trigger: GAAGAAATTGTTGAGCTTCCAGATTTGGATTACCTG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCAGGTAATCCAAATCTaGAAGCTCAACAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTQVIQI*KLNNFF
Trigger: GAAGAAATTGTTGAGCTTCCAGATTTGGATTACCTG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTAGACTATATGAGTCATaGTTCGCAGGTAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: QKLLNRASVSITPLCRISRLYES*FAGNPN
Trigger: ATTTGGATTACCTGCGAACCATGACTCATATAGTCT...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAGACTATATGAGTCATaGTTCGCAGGTAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTRLYES*FAGNPN
Trigger: ATTTGGATTACCTGCGAACCATGACTCATATAGTCT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
3UTR CAA 72 bp ACACTTATTTTTGGACCAGAAATAAAGGATAAACATTaGTCCAACCCTTTCAAGAAAGTCTCCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TLIFGPEIKDKH*SNPFKKVSTAH
Trigger: GTGAGCAGTGGAGACTTTCTTGAAAGGGTTGGACAAATGTTTATCCTTTATTTCTGGTCCAAAAATAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp AGATACATCCTTTTTGAGAATACCAGATCATTAAACTaGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAG +
Preference number: 4 (lower is better)
Translates to: RYILFENTRSLN*QLFQGLLENLE
Trigger: CTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCTGGTATTCTCAAAAAGGATGTATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp TCCATATTTAAAGCTCAGTTCCACCACCTGAGCAAGTaGCTTAATGACTTAATGAAGTTTCAGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SIFKAQFHHLSK*LNDLMKFQFFF
Trigger: GAAGAAGAACTGAAACTTCATTAAGTCATTAAGCAACTTGCTCAGGTGGTGGAACTGAGCTTTAAATATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp AAATGTCCTAAGAGAAGGTGCCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGACATAAAATTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KCPKRRCPLSNS*LQCIIGHKIGF
Trigger: GAAACCAATTTTATGTCCTATAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTTAGGACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR TCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTAGATGTGTCATTTTGTaGAGATCTGTCAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFRCVIL*RSVKLK
Trigger: CTTCAGTTTGACAGATCTTCACAAAATGACACATCT...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGAAAAGGACTACTAACTaGACACAATTCTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLKRTTN*TQFLKH
Trigger: GTGCTTCAAGAATTGTGTTCAGTTAGTAGTCCTTTT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTTGCTGAGAAAACATaGTTTTCTACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIFAEKT*FSTASS
Trigger: TGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTTGCTGAGAAAACATaGTTTTCTACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFAEKT*FSTASS
Trigger: TGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR GCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAAATTCAGTCACATGTaGCATGATAGTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTKFSHM*HDSIFP
Trigger: AGGAAAGATACTATCATGGCACATGTGACTGAATTT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAAGAAGGAAGCAATTTaGACATGCAAAACACTGAAT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTKKEAI*TCKTLN
Trigger: ATTCAGTGTTTTGCATGTCCAAATTGCTTCCTTCTT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAAGATGGGAAAGATATTaGATGTGCAATTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTRWERY*MCNSFV
Trigger: AACAAAGGAATTGCACATCCAATATCTTTCCCATCT...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CCA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAGATGGGAAAGATATTaGATGTGCAATTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTRWERY*MCNSFV
Trigger: AACAAAGGAATTGCACATCCAATATCTTTCCCATCT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CCA 90 bp ATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCCTATTGAAGTATTTTTaGCACCCATGTTATCATCAC +
Preference number: 4 (lower is better)
Translates to: IEVFLAPMLSSLSHSEMGLLKYF*HPCYHH
Trigger: GTGATGATAACATGGGTGCCAAAAATACTTCAATAG...GCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCTGTACCAATCCCCTTTaGAGTATCCTCTATTGTGAT +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFCTNPL*SILYCD
Trigger: ATCACAATAGAGGATACTCCAAAGGGGATTGGTACA...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCAATATCAAGAGCACATaGGATTGCTTGATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFNIKST*DCLIGA
Trigger: TGCACCAATCAAGCAATCCCATGTGCTCTTGATATT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGTTAAACGTTAGAGGTTaGCCTAGTAGGGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLNVRG*PSREFC
Trigger: ACAAAATTCCCTACTAGGCCAACCTCTAACGTTTAA...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR TCA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCTACTCTACAACCTTCTaGAATGAATCAACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFYSTTF*NESTVL
Trigger: TAGCACTGTTGATTCATTTCAGAAGGTTGTAGAGTA...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGTTGTGTTTCCTCTTTTaGTGTGTTCTAATGCTTCTA +
Preference number: 4 (lower is better)
Translates to: KYRMIDSKRQENLNSARLLCFLF*CVLMLL
Trigger: TAGAAGCATTAGAACACAGCAAAAGAGGAAACACAA...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR GCA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTACCATCAGATATTATaGATCTTGCTTTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFYHQIL*ILLFHD
Trigger: ATCGTGGAAAAGCAAGATGCATAATATCTGATGGTA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp ATAAAACTACAGTGCCAATATCAAGAGCACATGGGATaGCTTGATTGGTGCAATACACATAAGCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: IKLQCQYQEHMG*LDWCNTHKLQK
Trigger: TTTTTGTAGCTTATGTGTATTGCACCAATCAAGCAATCCCATGTGCTCTTGATATTGGCACTGTAGTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
3UTR CAA 72 bp ACTTCAAAAAGGAAATCTGCATCAGGCTTTAGTGTGTaGTCAAAGTACTTTCGGATATTACCTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSKRKSASGFSV*SKYFRILPHLR
Trigger: TCTCAAATGAGGTAATATCCGAAAGTACTTTGACAACACACTAAAGCCTGATGCAGATTTCCTTTTTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGACCTGTGAAACTAGATaGGCTGGGGTCAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: VIPATREAETELLEPGRWTCETR*AGVRWL
Trigger: CAGCCATCTGACCCCAGCCAATCTAGTTTCACAGGT...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATGGGAACGCAGTGTCTaGTGGCAGGCCACACACTTA +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGWERSV*WQATHL
Trigger: TAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS CCA 90 bp TGTTCTAATGCTTCTACAATGGGGCCTTCAGCTGGTGGGTTTGGTTaGAAAGGAGAGGTGTCCTTGGCCACAGGATATACCCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: CSNASTMGPSAGGFG*KGEVSLATGYTLCP
Trigger: GGGACACAGGGTATATCCTGTGGCCAAGGACACCTCTCCTTTCCAACCAAACCCACCAGCTGAAGGCCCCATTGTAGAAGCATTAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGGAAGTCTCACAGAGCTaGATAGTAGTACGGACTCTT +
Preference number: 5 (lower is better)
Translates to: VIPATREAETELLEPGRWEVSQS*IVVRTL
Trigger: AAGAGTCCGTACTACTATCAAGCTCTGTGAGACTTC...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGCCCGGGAGGTGGCGGTaGCAGTCAGCCAAGATCGTG +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTPGRWR*QSAKIV
Trigger: CACGATCTTGGCTGACTGCAACCGCCACCTCCCGGG...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 90 bp CAACAGTTCACTAGCGGACAGCAGTTTATTGGTTTCTCTCAGCAGTaGAGTCTCCTCCTCTTGGGTGGTTTGCACTGTGACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QQFTSGQQFIGFSQQ*SLLLLGGLHCDCSC
Trigger: GCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAGACTTCACTGCTGAGAGAAACCAATAAACTGCTGTCCGCTAGTGAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS GCA 90 bp ACGCTGATATTGAGTCATATAGGCCATGTAGCTAGCAGCTCGGGCTaGAATGGAGGCAGCGTGGTAAAACCTACAACCCATGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: TLILSHIGHVASSSG*NGGSVVKPTTHDLH
Trigger: ATGGAGGTCATGGGTTGTAGGTTTTACCACGCTGCCTCCATTGCAGCCCGAGCTGCTAGCTACATGGCCTATATGACTCAATATCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTGTGCAGGTGCCACACTaGATTACATACTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAVQVPH*ITYCCS
Trigger: GGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCAC...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAATGGGCAGTGAGCTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTCTCTTCAAGGCCACTaGATGTTGTGTGGTAATATC +
Preference number: 5 (lower is better)
Translates to: KWAVSSMWERSVLWQATHSLQGH*MLCGNI
Trigger: GATATTACCACACAACATCAAGTGGCCTTGAAGAGA...GTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAGCTCACTGCCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS CCA 90 bp CCAAAAAGGGAAGTACCATCAAAGGGCAAGTGGGAGATCTTCTCCTaGGTTTTCTTAGTGAGAGATGTAAGTCGAAGCCAGGCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: PKREVPSKGKWEIFS*VFLVRDVSRSQACR
Trigger: ACGGCAGGCCTGGCTTCGACTTACATCTCTCACTAAGAAAACCCAGGAGAAGATCTCCCACTTGCCCTTTGATGGTACTTCCCTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 90 bp GACAGCAGTTTATTGGTTTCTCTCAGCAGTGAAGTCTCCTCCTCTTaGGTGGTTTGCACTGTGACTGCAGCTGCGTACCTTTGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: DSSLLVSLSSEVSSS*VVCTVTAAAYLWWY
Trigger: ATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAGACTTCACTGCTGAGAGAAACCAATAAACTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAGGTCCACACACAGTCTaGCTGCTTCTGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGGPHTV*LLLYQN
Trigger: ATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACC...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTAATCCCAGCTACTCGGGAGGCTGAGACAGAATTGCTTGAACCCGGGAGGTGGCATACATCCACTACCTaGAGTCTAAAGAGAAGATAC +
Preference number: 5 (lower is better)
Translates to: VIPATREAETELLEPGRWHTSTT*SLKRRY
Trigger: GTATCTTCTCTTTAGACTCAAGGTAGTGGATGTATG...CCACCTCCCGGGTTCAAGCAATTCTGTCTCAGCCTCCCGAGTAGCTGGGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS GCA 90 bp TTATTGGTTTCTCTCAGCAGTGAAGTCTCCTCCTCTTGGGTGGTTTaGACTGTGACTGCAGCTGCGTACCTTTGGTGGTATCAGATATGC +
Preference number: 5 (lower is better)
Translates to: LLVSLSSEVSSSWVV*TVTAAAYLWWYQIC
Trigger: GCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAGACTTCACTGCTGAGAGAAACCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS CCA 90 bp GGGATGTTGTGTTTCCTCTTTTGCTGTGTTCTAATGCTTCTACAATaGGGCCTTCAGCTGGTGGGTTTGGTTGGAAAGGAGAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: GMLCFLFCCVLMLLQ*GLQLVGLVGKERCP
Trigger: AGGACACCTCTCCTTTCCAACCAAACCCACCAGCTGAAGGCCCCATTGTAGAAGCATTAGAACACAGCAAAAGAGGAAACACAACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGATTCCAGACATATGCTTaGAACACTCCTCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGFQTYA*NTPPFC
Trigger: GCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGAA...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAGGCCACACACTTAACTaGAAAGGGAACATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGGHTLN*KGNIFA
Trigger: TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCC...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTACTGCATCTTCACTaGGGAATCGCTGATTGCATT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLLHLH*GIADCI
Trigger: AATGCAATCAGCGATTCCCAAGTGAAGATGCAGTAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTACCTCCTAGAGCCTaGCTTGACCACTTAAACATA +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLPPRA*LDHLNI
Trigger: TATGTTTAAGTGGTCAAGCAAGGCTCTAGGAGGTAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCTCCTCTTGGGTGGTTaGCACTGTGACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLLLGG*HCDCSC
Trigger: GCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS CCA 90 bp GCTATCTCCAATGGGAAGAGGAACATTGCAGCTAGAGCACATTTCTaGGCGATGATTCTCAGAGGATGGCACCTTAGATTCAGGCATTCT +
Preference number: 5 (lower is better)
Translates to: AISNGKRNIAARAHF*AMILRGWHLRFRHS
Trigger: AGAATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGCTGCAATGTTCCTCTTCCCATTGGAGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTGGGAACGCAGTGTCTaGTGGCAGGCCACACACTTA +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYWERSV*WQATHL
Trigger: TAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTTGTTAACTCCTTTTaGCATGTCCGACACCAGAAA +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLVNSF*HVRHQK
Trigger: TTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTTCACAAATCCGGCATaGCCATTTACCCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCFTNPA*PFTPRR
Trigger: TCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGAA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTATGAAACTTGTGGCTaGCCAAAGACATGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAYETCG*PKTCSA
Trigger: AGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATTGTCATGCTCATCTaGGCAATGTCGGTACAATGT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGIVMLI*AMSVQC
Trigger: ACATTGTACCGACATTGCCAAGATGAGCATGACAAT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGAGGCCAAAGATTCTaGGGGGACCAGAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSRGQRF*GDQKWR
Trigger: TCTCCACTTCTGGTCCCCCAAGAATCTTTGGCCTCT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 90 bp GTGCACTCTCAGGATCATGAAATGCTTTGGTGCAGGTGCCACACTTaGTTACATACTGCTGCTCCTCCTCATCACTCTTTTCTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: VHSQDHEMLWCRCHT*LHTAAPPHHSFLCA
Trigger: TGCACAAAGAAAAGAGTGATGAGGAGGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCACCAAAGCATTTCATGATCCTGAGAGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS TCA 90 bp CCAATGGGAAGAGGAACATTGCAGCTAGAGCACATTTCTGGGCGATaGTTCTCAGAGGATGGCACCTTAGATTCAGGCATTCTATCAGTA +
Preference number: 5 (lower is better)
Translates to: PMGRGTLQLEHISGR*FSEDGTLDSGILSV
Trigger: TACTGATAGAATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGCTGCAATGTTCCTCTTCCCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS GCA 90 bp ATGGGTTCTCAACAGAGGAAGTTTGAGAAACTATCCTTTCTGGACTaGTGGAACAACTCCCAGAGAAGGAGCTGCTATCTCCAATGGGAA +
Preference number: 5 (lower is better)
Translates to: MGSQQRKFEKLSFLD*WNNSQRRSCYLQWE
Trigger: TTCCCATTGGAGATAGCAGCTCCTTCTCTGGGAGTTGTTCCAGCAGTCCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTGAGAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CCA 90 bp GTATCACTCGGGACATTTCAGCTACTTGTGTCTGGAGATAGAGGATaGCATCCCGTCCATGCTGTGAAGCTGAAGAAGAATCTATACGTA +
Preference number: 5 (lower is better)
Translates to: VSLGTFQLLVSGDRG*HPVHAVKLKKNLYV
Trigger: TACGTATAGATTCTTCTTCAGCTTCACAGCATGGACGGGATGCCATCCTCTATCTCCAGACACAAGTAGCTGAAATGTCCCGAGTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 90 bp ACACCTCTTTGTTCCATTCTCTTCAAAAGACCTGTGAAACTAGATTaGCTGGGGTCAGATGGCTGCCCTTTGTCATCAGCTGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: TPLCSILFKRPVKLD*LGSDGCPLSSADGD
Trigger: ATCACCATCAGCTGATGACAAAGGGCAGCCATCTGACCCCAGCCAATCTAGTTTCACAGGTCTTTTGAAGAGAATGGAACAAAGAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 90 bp TCCTCTTGGGTGGTTTGCACTGTGACTGCAGCTGCGTACCTTTGGTaGTATCAGATATGCTATTTAACAAGGCACACATCATATCTCCCT +
Preference number: 5 (lower is better)
Translates to: SSWVVCTVTAAAYLW*YQICYLTRHTSYLP
Trigger: AGGGAGATATGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS-3UTR CAA 90 bp ATAAAATTGGTTTCCCAGACACCCACGTGTGGCCTCCTCTTCGGAATGAACTTTGGTCCACACACAGTCTaGCTGCTTCTGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: IKLVSQTPTCGLLFGMNFGPHTV*LLLYQN
Trigger: ATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACC...AAAGTTCATTCCGAAGAGGAGGCCACACGTGGGTGTCTGGGAAACCAATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR CAA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTATTCTGCTTATGATTTaGGGTGCTGGTTTCATCCAC +
Preference number: 5 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAILLMI*GAGFIH
Trigger: GTGGATGAAACCAGCACCCAAAATCATAAGCAGAAT...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTCAGAAGAAGGATCCTaGTTCCCTTCGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYSEEGS*FPSLLW
Trigger: CCACAGCAGCGAAGGGAACAAGGATCCTTCTTCTGA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATAGCTGATGAAGGCTaGTTAGCAGTCAAATTATCC +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGIADEG*LAVKLS
Trigger: GGATAATTTGACTGCTAACAAGCCTTCATCAGCTAT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTGTGTCCATCACACCTTaGTGTAGAATCTCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCVSITP*CRISGN
Trigger: GTTGCCAGAGATTCTACACAAAGGTGTGATGGACAC...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGAGCTGGTGGGTTTGGTaGGAAAGGAGAGGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTSWWVW*ERRGVL
Trigger: AAGGACACCTCTCCTTTCCAACCAAACCCACCAGCT...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGGGTGGTTTCGAGGTTaGTACCAATCCCCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTGWFRG*YQSPLE
Trigger: CTCCAAAGGGGATTGGTACAAACCTCGAAACCACCC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 90 bp TCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTaGAAGGGAACATCTTTGCACAGAGAGATCAAAAGTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SMWERSVLWQATHLT*KGTSLHREIKSFFA
Trigger: TGCAAAGAAACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
ENST00000504603.1
CDS TCA 90 bp GTCCATGCTGTGAAGCTGAAGAAGAATCTATACGTAAATTCTCTTTaGCCTCAGAAGAGGCCAAAGATTCTTGGGGGACCAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: VHAVKLKKNLYVNSL*PQKRPKILGGPEVE
Trigger: CTCCACTTCTGGTCCCCCAAGAATCTTTGGCCTCTTCTGAGGTCAAAGAGAATTTACGTATAGATTCTTCTTCAGCTTCACAGCATGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370708.8
ENST00000508603.5
CDS GCA 90 bp GTTTGCACTGTGACTGCAGCTGCGTACCTTTGGTGGTATCAGATATaGTATTTAACAAGGCACACATCATATCTCCCTCTAAGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: VCTVTAAAYLWWYQI*YLTRHTSYLPLSGE
Trigger: CTCACCACTTAGAGGGAGATATGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS CCA 90 bp AACATTGCAGCTAGAGCACATTTCTGGGCGATGATTCTCAGAGGATaGCACCTTAGATTCAGGCATTCTATCAGTATAAGAGGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: NIAARAHFWAMILRG*HLRFRHSISIRGAR
Trigger: CCTAGCACCTCTTATACTGATAGAATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGCTGCAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAAGATGGGAAAGATATaGGATGTGCAATTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGKMGKI*DVQFLC
Trigger: ACAAAGGAATTGCACATCCAATATCTTTCCCATCTT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATGGGAACGCAGTGTCTaGTGGCAGGCCACACACTTA +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTWERSV*WQATHL
Trigger: TAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAAATTCATCTTCTTTTTaGGAATGGCAATGCACTCCA +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGNSSSF*EWQCTP
Trigger: TGGAGTGCATTGCCATTCCAAAAAAGAAGATGAATT...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACTTTTCTTTGTGCACTaGATGGATATGAGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGLFFVH*MDMSVH
Trigger: ATGAACACTCATATCCATCAAGTGCACAAAGAAAAG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTGAAAGGGAACATCCCTATTGAAGTATTTTaGGCACCCATGTTATCATCA +
Preference number: 5 (lower is better)
Translates to: VGTQCLVAGHTLNLKGNIPIEVF*APMLSS
Trigger: TGATGATAACATGGGTGCCAAAAATACTTCAATAGG...GATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CAA 90 bp TGCTGTCTCCTCTTGCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGACAAGGCCACTTGATGTaGTGTGGTAATATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: CCLLLPCPHICLTTLLSGQGHLM*CGNIFN
Trigger: ATTAAAGATATTACCACACAACATCAAGTGGCCTTG...TCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGCAAGAGGAGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCTACCTCCTAGAGCCTaGCTTGACCACTTAAACATA +
Preference number: 5 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCLPPRA*LDHLNI
Trigger: TATGTTTAAGTGGTCAAGCAAGGCTCTAGGAGGTAG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGTCAGATGGCTGCCCTTaGTCATCAGCTGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPESDGCP*SSADGD
Trigger: ATCACCATCAGCTGATGACAAAGGGCAGCCATCTGA...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCCCTAGTAGTACAAAGTaGCCAAAGGCCTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSPSSTK*PKACIH
Trigger: ATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGG...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 90 bp ATCCGGCATTGCCATTTACCCCTCGGAGAACTATTTGCCGGGGAATaGTCAATAACAGTAATAGCTGATGAAGGCTTGTTAGCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: IRHCHLPLGELFAGE*SITVIADEGLLAVK
Trigger: TTTGACTGCTAACAAGCCTTCATCAGCTATTACTGTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGGGGTAAATGGCAATGCCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS-3UTR CAA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTCATCCACAAAGACTaGATTGCAATCTGGACAATA +
Preference number: 5 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAFIHKD*IAIWTI
Trigger: TATTGTCCAGATTGCAATCAAGTCTTTGTGGATGAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTCAGAAGAAGGATCCTaGTTCCCTTCGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNISEEGS*FPSLLW
Trigger: CCACAGCAGCGAAGGGAACAAGGATCCTTCTTCTGA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTCTTGTTAACTCCTTTTaGCATGTCCGACACCAGAAA +
Preference number: 5 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCLVNSF*HVRHQK
Trigger: TTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAAG...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATTCACAAATCCGGCATaGCCATTTACCCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATFTNPA*PFTPRR
Trigger: TCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGAA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GCCCTGCCCCCACATCTGCTTAACTACTCTTCTTTCTGGAATGCCTCTTTTGCTTTTATCCAGCATGATTaGGAGACATCTGCTATAATC +
Preference number: 5 (lower is better)
Translates to: ALPPHLLNYSSFWNASFAFIQHD*ETSAII
Trigger: GATTATAGCAGATGTCTCCAAATCATGCTGGATAAA...AGCAAAAGAGGCATTCCAGAAAGAAGAGTAGTTAAGCAGATGTGGGGGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGTGCAGGTGCCACACTaGATTACATACTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISVQVPH*ITYCCS
Trigger: GGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCAC...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGTGCAGGTGCCACACTaGATTACATACTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTVQVPH*ITYCCS
Trigger: GGAGCAGCAGTATGTAATCAAGTGTGGCACCTGCAC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS TCA 90 bp TATTTAAATGTGCCCCTCCGTGAATCCGGCTCATGTGTAAACGAATaGCCCCTGAATCATCACATACCTTTCCACAGACCACACATTTAT +
Preference number: 5 (lower is better)
Translates to: YLNVPLRESGSCVNE*PLNHHIPFHRPHIY
Trigger: ATAAATGTGTGGTCTGTGGAAAGGTATGTGATGATTCAGGGGTCATTCGTTTACACATGAGCCGGATTCACGGAGGGGCACATTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS GCA 90 bp AGGCTTTCTGCAGTGAGCACAGCTGTATCTATGAAACTTGTGGCTTaGCAAAGACATGCAGTGCTGTTTTACATATTCCTGGGAATCAAA +
Preference number: 5 (lower is better)
Translates to: RLSAVSTAVSMKLVA*QRHAVLFYIFLGIK
Trigger: TTTGATTCCCAGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGCTCACTGCAGAAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCTACTGCATCTTCACTaGGGAATCGCTGATTGCATT +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLLHLH*GIADCI
Trigger: AATGCAATCAGCGATTCCCAAGTGAAGATGCAGTAG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTCACAAATCCGGCATaGCCATTTACCCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFTNPA*PFTPRR
Trigger: TCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGTGTCCATCACACCTTaGTGTAGAATCTCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATVSITP*CRISGN
Trigger: GTTGCCAGAGATTCTACACAAAGGTGTGATGGACAC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGATGGGAAGAGGAACATaGCAGCTAGAGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTMGRGT*QLEHIS
Trigger: AGAAATGTGCTCTAGCTGCAATGTTCCTCTTCCCAT...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGAAAGGAGAGGTGTCCTaGGCCACAGGATATACCCTG +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLKGEVS*ATGYTL
Trigger: CAGGGTATATCCTGTGGCCAAGGACACCTCTCCTTT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCAGCACATGGGATTGCTaGATTGGTGCAATACACATA +
Preference number: 5 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSSTWDC*IGAIHI
Trigger: TATGTGTATTGCACCAATCAAGCAATCCCATGTGCT...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGGTAGAAGTCTTTTTCCAGTTGGTGTCCATAATAGACCTGCGACATCTAGCTCTTTTTCAACCTCCTaGTTTACAGTACCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: TGRSLFPVGVHNRPATSSSFSTS*FTVPER
Trigger: CCTCTCAGGTACTGTAAACAAGGAGGTTGAAAAAGA...GCTAGATGTCGCAGGTCTATTATGGACACCAACTGGAAAAAGACTTCTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTCTCTCAAGAGTGCCTaGCAATCAGCACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFSLKSA*QSAQSL
Trigger: CAGGCTCTGTGCTGATTGCAAGGCACTCTTGAGAGA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS GCA 90 bp CTTGGCAATGTCGGTACAATGTTTCTATCTTATGAAAAGGCTTTCTaGAGTGAGCACAGCTGTATCTATGAAACTTGTGGCTTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LGNVGTMFLSYEKAF*SEHSCIYETCGLPK
Trigger: CTTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGCTCACTGCAGAAAGCCTTTTCATAAGATAGAAACATTGTACCGACATTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS GCA 90 bp AAGTTGCCAAAGGCCTGCATCCATACCATCAGATATTATGCATCTTaGTTTTCCACGATCAAATTCTGGGTCATGAACCAGATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KLPKACIHTIRYYAS*FSTIKFWVMNQIFH
Trigger: ATGGAAGATCTGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS GCA 90 bp TACAGAGTCCATTATGTCCCTAGTAGTACAAAGTTGCCAAAGGCCTaGATCCATACCATCAGATATTATGCATCTTGCTTTTCCACGATC +
Preference number: 5 (lower is better)
Translates to: YRVHYVPSSTKLPKA*IHTIRYYASCFSTI
Trigger: GATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGGGACATAATGGACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 90 bp AACTTGTGGCTTGCCAAAGACATGCAGTGCTGTTTTACATATTCCTaGGAATCAAACATATCTTCACAAATCCGGCATTGCCATTTACCC +
Preference number: 5 (lower is better)
Translates to: NLWLAKDMQCCFTYS*ESNISSQIRHCHLP
Trigger: GGGTAAATGGCAATGCCGGATTTGTGAAGATATGTTTGATTCCCAGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CCA 90 bp CATACCATCAGATATTATGCATCTTGCTTTTCCACGATCAAATTCTaGGTCATGAACCAGATCTTCCATGTCTTCCCAGAGTTTACGCTG +
Preference number: 5 (lower is better)
Translates to: HTIRYYASCFSTIKF*VMNQIFHVFPEFTL
Trigger: CAGCGTAAACTCTGGGAAGACATGGAAGATCTGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGGTCCACACACAGTCTaGCTGCTTCTGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTGPHTV*LLLYQN
Trigger: ATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGTCCACACACAGTCTaGCTGCTTCTGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGPHTV*LLLYQN
Trigger: ATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp GCAAAGGAGCTGAAGAAAGGTCCATGTAGTGTAATTGTTGGATCACATGGAGAGCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGA +
Preference number: 5 (lower is better)
Translates to: AKELKKGPCSVIVGSHGEPLSNS*LQCIIG
Trigger: TCCTATAATGCACTGTAACAAGGAGTTTGACAATGG...CTCTCCATGTGATCCAACAATTACACTACATGGACCTTTCTTCAGCTCCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502749.1
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACACTACTGCATCTTCACTaGGGAATCGCTGATTGCATT +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATLLHLH*GIADCI
Trigger: AATGCAATCAGCGATTCCCAAGTGAAGATGCAGTAG...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATATGAAACTTGTGGCTaGCCAAAGACATGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATYETCG*PKTCSA
Trigger: AGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CTCTTCTTTCTGGAATGCCTCTTTTGCTCCCATTTTGTGAGCTCCTGCAGATGTTTTATCCAGCATGATTaGGAGACATCTGCTATAATC +
Preference number: 5 (lower is better)
Translates to: LFFLECLFCSHFVSSCRCFIQHD*ETSAII
Trigger: GATTATAGCAGATGTCTCCAAATCATGCTGGATAAA...ACATCTGCAGGAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAAGCGGAGGCTTCCAATaGGTGTTTCCTCCTATATTC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTSGGFQ*VFPPIF
Trigger: GAATATAGGAGGAAACACCAATTGGAAGCCTCCGCT...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357489.7
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATCTGGAATGCCTCTTTaGCTCCCATTTTGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTSGMPL*LPFCEL
Trigger: GAGCTCACAAAATGGGAGCAAAAGAGGCATTCCAGA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp ACAAAGGGATTCCGGAATGTGTCTTTTTCAACCTCCTTGTTTACAGTACCTGAGAACAGCTTTCACATCTaGTCCAAAAAGGGAAGTACC +
Preference number: 5 (lower is better)
Translates to: TKGFRNVSFSTSLFTVPENSFHI*SKKGST
Trigger: GGTACTTCCCTTTTTGGACAAGATGTGAAAGCTGTT...CTCAGGTACTGTAAACAAGGAGGTTGAAAAAGACACATTCCGGAATCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGAAGTCTTTTTCCAGTaGGTGTCCATAATAGACCTG +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTEVFFQ*VSIIDL
Trigger: CAGGTCTATTATGGACACCAACTGGAAAAAGACTTC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAAGGGAAGGGGAAGCATATTAAAGGGAAGTGCCAAAATCGTTTCAGACAAACGGATTGTCAGGCATGTTaGGAATTCTTGGTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: KGKGKHIKGKCQNRFRQTDCQAC*EFLVLG
Trigger: TCCTAAGACCAAGAATTCCAAACATGCCTGACAATC...CGTTTGTCTGAAACGATTTTGGCACTTCCCTTTAATATGCTTCCCCTTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp GTTTCTCCACTTCAACATGGCGGGCTAGACGAGCCAGAGTTAAAGCAACTTTATAACAAAAGAATCCTGTaGTATAGGGCACATCAGTAT +
Preference number: 5 (lower is better)
Translates to: VSPLQHGGLDEPELKQLYNKRIL*YRAHQY
Trigger: ATACTGATGTGCCCTATACAACAGGATTCTTTTGTT...ATAAAGTTGCTTTAACTCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370711.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTGCAGCTGCGTACCTTaGGTGGTATCAGATATGCTA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTCSCVP*VVSDML
Trigger: TAGCATATCTGATACCACCAAAGGTACGCAGCTGCA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS GCA 90 bp ATAACTCTGACTACAGAGTCCATTATGTCCCTAGTAGTACAAAGTTaGCAAAGGCCTGCATCCATACCATCAGATATTATGCATCTTGCT +
Preference number: 5 (lower is better)
Translates to: ITLTTESIMSLVVQS*QRPASIPSDIMHLA
Trigger: AGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGGGACATAATGGACTCTGTAGTCAGAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTCCAGACATATGCTTaGAACACTCCTCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTFQTYA*NTPPFC
Trigger: GCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTCCAGACATATGCTTaGAACACTCCTCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTFQTYA*NTPPFC
Trigger: GCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCCACACACTTAACTaGAAAGGGAACATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISGHTLN*KGNIFA
Trigger: TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCC...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGCCACACACTTAACTaGAAAGGGAACATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGHTLN*KGNIFA
Trigger: TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp ATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCGGCCACACACTTAACTaGAAAGGGAACATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: IEVFLAPMLSSLSHSEMGGHTLN*KGNIFA
Trigger: TGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCC...GCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTAATGACTCGGACTTaGTGTCCTGAATTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLMTRT*CPEFCL
Trigger: TAAGCAGAATTCAGGACACAAAGTCCGAGTCATTAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTATGAAACTTGTGGCTaGCCAAAGACATGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTYETCG*PKTCSA
Trigger: AGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATTAAATTCTGTGCTGTaGCCGAACATAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATLNSVL*PNINCS
Trigger: GCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATGTGAAAGGAATTTGCTaGGGTAGTTGTTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYVKGIC*GSCSSR
Trigger: TCTAGATGAACAACTACCCAAGCAAATTCCTTTCAC...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGGATGTGCAATTCCTTaGTTATCACCCAGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATGCAIP*LSPSLK
Trigger: TTTCAAACTGGGTGATAACAAAGGAATTGCACATCC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTCATCCACAAAGACTaGATTGCAATCTGGACAATA +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYFIHKD*IAIWTI
Trigger: TATTGTCCAGATTGCAATCAAGTCTTTGTGGATGAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAATTCTGCTTATGATTTaGGGTGCTGGTTTCATCCAC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTILLMI*GAGFIH
Trigger: GTGGATGAAACCAGCACCCAAAATCATAAGCAGAAT...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATTCTGCTTATGATTTaGGGTGCTGGTTTCATCCAC +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTILLMI*GAGFIH
Trigger: GTGGATGAAACCAGCACCCAAAATCATAAGCAGAAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATAATTCATCTTCTTTTTaGGAATGGCAATGCACTCCA +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYNSSSF*EWQCTP
Trigger: TGGAGTGCATTGCCATTCCAAAAAAGAAGATGAATT...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCTTGTTAACTCCTTTTaGCATGTCCGACACCAGAAA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTLVNSF*HVRHQK
Trigger: TTTCTGGTGTCGGACATGCAAAAAGGAGTTAACAAG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCATTGTCATGCTCATCTaGGCAATGTCGGTACAATGT +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIIVMLI*AMSVQC
Trigger: ACATTGTACCGACATTGCCAAGATGAGCATGACAAT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATTGTCATGCTCATCTaGGCAATGTCGGTACAATGT +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTIVMLI*AMSVQC
Trigger: ACATTGTACCGACATTGCCAAGATGAGCATGACAAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATTTTATCCAGCATGATTaGGAGACATCTGCTATAATC +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYFIQHD*ETSAII
Trigger: GATTATAGCAGATGTCTCCAAATCATGCTGGATAAA...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTTAAATTCTGTGCTGTaGCCGAACATAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNILNSVL*PNINCS
Trigger: GCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCTTAAATTCTGTGCTGTaGCCGAACATAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTLNSVL*PNINCS
Trigger: GCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAA...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp AGTCCCAGCAATAAGATAGGATGTACCCACTTCTCTAAGGACCTAAAAGCCTATCTTTTCTTTGTGCACTaGATGGATATGAGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: SPSNKIGCTHFSKDLKAYLFFVH*MDMSVH
Trigger: ATGAACACTCATATCCATCAAGTGCACAAAGAAAAG...ATAGGCTTTTAGGTCCTTAGAGAAGTGGGTACATCCTATCTTATTGCTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACAGTGAAAGGAATTTGCTaGGGTAGTTGTTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATVKGIC*GSCSSR
Trigger: TCTAGATGAACAACTACCCAAGCAAATTCCTTTCAC...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGCAACATCACTGTCACATTCTTaGGTGGTATCAGATATGCTA +
Preference number: 5 (lower is better)
Translates to: FLIEHQCPSHLCVESLATSLSHS*VVSDML
Trigger: TAGCATATCTGATACCACCAAAGAATGTGACAGTGA...TGTTGCCAGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCTCTCTTCAAGGCCACTaGATGTTGTGTGGTAATATC +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNISLQGH*MLCGNI
Trigger: GATATTACCACACAACATCAAGTGGCCTTGAAGAGA...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000504603.1
CDS-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTCTCAACAGAGGAAGTTaGAGAAACTATCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTLNRGS*RNYPFW
Trigger: CCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTGAG...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGGGACATTTCAGCTACTaGTGTCTGGAGATAGAGGAT +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLGHFSY*CLEIED
Trigger: ATCCTCTATCTCCAGACACAAGTAGCTGAAATGTCC...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCAAGAGCACATGGGATaGCTTGATTGGTGCAATACA +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLQEHMG*LDWCNT
Trigger: TGTATTGCACCAATCAAGCAATCCCATGTGCTCTTG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTACCAGATCATTAAACTaGCAACTATTCCAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTTRSLN*QLFQGL
Trigger: GAGGCCTTGGAATAGTTGCAAGTTTAATGATCTGGT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGATCAAAAGGACATGGTaGGACTATGACCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLIKRTW*DYDHFQ
Trigger: CTGGAAGTGGTCATAGTCCAACCATGTCCTTTTGAT...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTCAGAAAACAAGTGACTaGCTAATGCTGAGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFQKTSD*LMLRVK
Trigger: CTTGACCCTCAGCATTAGCAAGTCACTTGTTTTCTG...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 90 bp TTCTATATCTATAGGGGTGGTTTCGAGGTTTGTACCAATCCCCTTTaGAGTATCCTCTATTGTGATAATGTGCTTTCTGATCATGACTAT +
Preference number: 5 (lower is better)
Translates to: FYIYRGGFEVCTNPL*SILYCDNVLSDHDY
Trigger: ATAGTCATGATCAGAAAGCACATTATCACAATAGAGGATACTCCAAAGGGGATTGGTACAAACCTCGAAACCACCCCTATAGATATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTAATTGTGCCTGTTTaGAGTCCTGGCATTTTTAGC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTLIVPV*SPGIFS
Trigger: GCTAAAAATGCCAGGACTCAAAACAGGCACAATTAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGA +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIPLSNS*LQCIIG
Trigger: TCCTATAATGCACTGTAACAAGGAGTTTGACAATGG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGA +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISPLSNS*LQCIIG
Trigger: TCCTATAATGCACTGTAACAAGGAGTTTGACAATGG...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCCCATTGTCAAACTCCTaGTTACAGTGCATTATAGGA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTPLSNS*LQCIIG
Trigger: TCCTATAATGCACTGTAACAAGGAGTTTGACAATGG...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTGGATGTGCAATTCCTTaGTTATCACCCAGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISGCAIP*LSPSLK
Trigger: TTTCAAACTGGGTGATAACAAAGGAATTGCACATCC...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCGGATGTGCAATTCCTTaGTTATCACCCAGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTGCAIP*LSPSLK
Trigger: TTTCAAACTGGGTGATAACAAAGGAATTGCACATCC...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTTAATGACTCGGACTTaGTGTCCTGAATTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISLMTRT*CPEFCL
Trigger: TAAGCAGAATTCAGGACACAAAGTCCGAGTCATTAA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACATTAATGACTCGGACTTaGTGTCCTGAATTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTLMTRT*CPEFCL
Trigger: TAAGCAGAATTCAGGACACAAAGTCCGAGTCATTAA...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAATAGCTGATGAAGGCTaGTTAGCAGTCAAATTATCC +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTIADEG*LAVKLS
Trigger: GGATAATTTGACTGCTAACAAGCCTTCATCAGCTAT...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATAGCTGATGAAGGCTaGTTAGCAGTCAAATTATCC +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTIADEG*LAVKLS
Trigger: GGATAATTTGACTGCTAACAAGCCTTCATCAGCTAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAGTGAAAGGAATTTGCTaGGGTAGTTGTTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTVKGIC*GSCSSR
Trigger: TCTAGATGAACAACTACCCAAGCAAATTCCTTTCAC...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTATACGTAAATTCTCTTaGACCTCAGAAGAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTIRKFS*TSEEAK
Trigger: TTTGGCCTCTTCTGAGGTCAAAGAGAATTTACGTAT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCACTCAGTCTTACAGCTaGATACGAGAGCTTGATAGG +
Preference number: 5 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFTQSYS*IRELDR
Trigger: CCTATCAAGCTCTCGTATCAAGCTGTAAGACTGAGT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCACCACCTGAGCAAGTaGCTTAATGACTTAATGAAG +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLHHLSK*LNDLMK
Trigger: CTTCATTAAGTCATTAAGCAACTTGCTCAGGTGGTG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACAATTGGTGTTTCCTCCTaGAAAGCCCCAAATAAATGT +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTIGVSS*KAPNKC
Trigger: ACATTTATTTGGGGCTTTCAAGGAGGAAACACCAAT...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370706.9
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCATTGGTGTTTCCTCCTaGAAAGCCCCAAATAAATGT +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTIGVSS*KAPNKC
Trigger: ACATTTATTTGGGGCTTTCAAGGAGGAAACACCAAT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS TCA 90 bp CAGTTTGAAACTCTGATGGAAATGATTCTTTCCAGACATATGCTTTaGACACTCCTCCTTTCTGCTAAAAAGAAGGAAGCAATTTGGACA +
Preference number: 5 (lower is better)
Translates to: QFETLMEMILSRHML*TLLLSAKKKEAIWT
Trigger: TGTCCAAATTGCTTCCTTCTTTTTAGCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGAAAGAATCATTTCCATCAGAGTTTCAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CCA 90 bp GCACAGAGAGATCAAAAGTTTCTTTGCAAAAGATGGGAAAGATATTaGATGTGCAATTCCTTTGTTATCACCCAGTTTGAAACTCTGATG +
Preference number: 5 (lower is better)
Translates to: AQRDQKFLCKRWERY*MCNSFVITQFETLM
Trigger: CATCAGAGTTTCAAACTGGGTGATAACAAAGGAATTGCACATCCAATATCTTTCCCATCTTTTGCAAAGAAACTTTTGATCTCTCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCAAGATGGGAAAGATATaGGATGTGCAATTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIKMGKI*DVQFLC
Trigger: ACAAAGGAATTGCACATCCAATATCTTTCCCATCTT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000504603.1
CDS-3UTR CAA 90 bp GTCACTGTCAACCTCTTAAATGATCACCTTTGTTATTGCTTTCTGGTTTTCACCAAGATGGGAAAGATATaGGATGTGCAATTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: VTVNLLNDHLCYCFLVFTKMGKI*DVQFLC
Trigger: ACAAAGGAATTGCACATCCAATATCTTTCCCATCTT...GGTGAAAACCAGAAAGCAATAACAAAGGTGATCATTTAAGAGGTTGACAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491832.6
CDS-3UTR CAA 90 bp ATTGAAGTATTTTTGGCACCCATGTTATCATCACTGTCACATTCTGAAATGGGCAAGATGGGAAAGATATaGGATGTGCAATTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: IEVFLAPMLSSLSHSEMGKMGKI*DVQFLC
Trigger: ACAAAGGAATTGCACATCCAATATCTTTCCCATCTT...GCCCATTTCAGAATGTGACAGTGATGATAACATGGGTGCCAAAAATACTTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504603.1
CDS-3UTR CAA 90 bp CAAAAGCTTCTTAATAGAGCATCAGTGTCCATCACACCTTTGTGTAGAATCTCTTTCATCCACAAAGACTaGATTGCAATCTGGACAATA +
Preference number: 5 (lower is better)
Translates to: QKLLNRASVSITPLCRISFIHKD*IAIWTI
Trigger: TATTGTCCAGATTGCAATCAAGTCTTTGTGGATGAA...AGAGATTCTACACAAAGGTGTGATGGACACTGATGCTCTATTAAGAAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCAATTCATCTTCTTTTTaGGAATGGCAATGCACTCCA +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNINSSSF*EWQCTP
Trigger: TGGAGTGCATTGCCATTCCAAAAAAGAAGATGAATT...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp TTATGCAAATATTCTGACACCATTCCCTTTAACCAGGAGACCATACAAGTCACACCTATTGAAGTATTTTaGGCACCCATGTTATCATCA +
Preference number: 5 (lower is better)
Translates to: LCKYSDTIPFNQETIQVTPIEVF*APMLSS
Trigger: TGATGATAACATGGGTGCCAAAAATACTTCAATAGG...TGTGACTTGTATGGTCTCCTGGTTAAAGGGAATGGTGTCAGAATATTTGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000370706.9
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCCTATTGAAGTATTTTaGGCACCCATGTTATCATCA +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIPIEVF*APMLSS
Trigger: TGATGATAACATGGGTGCCAAAAATACTTCAATAGG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000504603.1
CDS-3UTR CAA 90 bp AAGAATTCGTTATCTCAGTCTCTTCAAGGCCACTTGATGTTGTGTGGTAATATCCAAGGCCACTTGATGTaGTGTGGTAATATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: KNSLSQSLQGHLMLCGNIQGHLM*CGNIFN
Trigger: ATTAAAGATATTACCACACAACATCAAGTGGCCTTG...GATATTACCACACAACATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000504603.1
CDS-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTGAGTTTACGCTGATATaGAGTCATATAGGCCATGTA +
Preference number: 5 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFEFTLI*SHIGHV
Trigger: TACATGGCCTATATGACTCAATATCAGCGTAAACTC...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTATGACTGGGCTAAATTaGCAAAACAATATCCCCTTT +
Preference number: 5 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTMTGLN*QNNIPF
Trigger: AAAGGGGATATTGTTTTGCAAATTTAGCCCAGTCAT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCAGTATCTGGAGACACTaGGGCATATCAGTTAGAGTA +
Preference number: 5 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFSIWRH*GISVRV
Trigger: TACTCTAACTGATATGCCCAAGTGTCTCCAGATACT...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp ACAGTAAATGCTGTGATAGAGCCACTCTTACGGGTAATGAAAGAAAACAGTACTACTGTGTTTAGTGACTaGGGGAAACGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: TVNAVIEPLLRVMKENSTTVFSD*GKRFYF
Trigger: GAAATAAAAACGTTTCCCCAAGTCACTAAACACAGT...AGTACTGTTTTCTTTCATTACCCGTAAGAGTGGCTCTATCACAGCATTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AAATACAGAATGATAGATTCCAAAAGACAAGAGAACCTAAACAGTGCGAGACTGCAAATACCATGTGCTTaGCACCATTCCTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: KYRMIDSKRQENLNSARLQIPCA*HHSFFL
Trigger: AAGGAAAAAGGAATGGTGCAAAGCACATGGTATTTG...CAGTCTCGCACTGTTTAGGTTCTCTTGTCTTTTGGAATCTATCATTCTGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp AGATCATTAAACTTGCAACTATTCCAAGGCCTCCTAGAAAACCTAGAGGTATTTTCAGGCTTTAGTGTGTaGTCAAAGTACTTTCGGATA +
Preference number: 5 (lower is better)
Translates to: RSLNLQLFQGLLENLEVFSGFSV*SKYFRI
Trigger: TATCCGAAAGTACTTTGACAACACACTAAAGCCTGA...AAATACCTCTAGGTTTTCTAGGAGGCCTTGGAATAGTTGCAAGTTTAATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS-3UTR CAA 90 bp CTTTCAGAACTACTTGGTCACCAATTTGATAATTTCCCAATACCTTTACACTTCTGTTTAGAAGGTAGGTaGTTTAAGAAGGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LSELLGHQFDNFPIPLHFCLEGR*FKKAIL
Trigger: CAAGATGGCCTTCTTAAACAACCTACCTTCTAAACA...GAAGTGTAAAGGTATTGGGAAATTATCAAATTGGTGACCAAGTAGTTCTGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 90 bp TCCTTCCTAAATAAGAAGTTTTTGTTATGGCAGCATTCTGTTTCTTaGTTTAGGCGCTGTTTACATAGATGTATGAGGCTTTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: SFLNKKFLLWQHSVS*FRRCLHRCMRLCKT
Trigger: AGTTTTGCAAAGCCTCATACATCTATGTAAACAGCGCCTAAATCAAGAAACAGAATGCTGCCATAACAAAAACTTCTTATTTAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510989.1
CDS GCA 90 bp AGGTTTGTACCAATCCCCTTTGGAGTATCCTCTATTGTGATAATGTaGTTTCTGATCATGACTATAAAAGTATCGATGCTGATTATAGTA +
Preference number: 5 (lower is better)
Translates to: RFVPIPFGVSSIVIM*FLIMTIKVSMLIIV
Trigger: TACTATAATCAGCATCGATACTTTTATAGTCATGATCAGAAAGCACATTATCACAATAGAGGATACTCCAAAGGGGATTGGTACAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 72 bp GACGCAAAACCTCTTCAAAGGAGGAGCGGCCCTTACTaGCCCGCTATGCCCCCGGAGCCGCTTTCTCTCACT +
Preference number: 6 (lower is better)
Translates to: DAKPLQRRSGPY*PAMPPEPLSLT
Trigger: AGTGAGAGAAAGCGGCTCCGGGGGCATAGCGGGCCAGTAAGGGCCGCTCCTCCTTTGAAGAGGTTTTGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357489.7
ENST00000510483.5
CDS TCA 72 bp CATGTTAGCCAGGATGGTCTCGATCTTCTGACCTCGTaGTCCGTCCGCCTCAGCCTTCCAAAGTTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: HVSQDGLDLLTS*SVRLSLPKFWD
Trigger: ATCCCAGAACTTTGGAAGGCTGAGGCGGACGGATCACGAGGTCAGAAGATCGAGACCATCCTGGCTAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444273.6
CDS GCA 72 bp TCTCTCAGCAGTGAAGTCTCCTCCTCTTGGGTGGTTTaGACTGTGACTGCAGCTGCGTACCTTTGGTGGTAT +
Preference number: 6 (lower is better)
Translates to: SLSSEVSSSWVV*TVTAAAYLWWY
Trigger: ATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAGACTTCACTGCTGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS CAA 72 bp TCAGCTGGTGGGTTTGGTTGGAAAGGAGAGGTGTCCTaGGCCACAGGATATACCCTGTGTCCCATGAAGGAA +
Preference number: 6 (lower is better)
Translates to: SAGGFGWKGEVS*ATGYTLCPMKE
Trigger: TTCCTTCATGGGACACAGGGTATATCCTGTGGCCAAGGACACCTCTCCTTTCCAACCAAACCCACCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp TGCTTCTACAATGGGGCCTTCAGCTGGTGGGTTTGGTaGGAAAGGAGAGGTGTCCTTGGCCACAGGATATAC +
Preference number: 6 (lower is better)
Translates to: CFYNGAFSWWVW*ERRGVLGHRIY
Trigger: GTATATCCTGTGGCCAAGGACACCTCTCCTTTCCAACCAAACCCACCAGCTGAAGGCCCCATTGTAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 90 bp TGCTGTGTTCTAATGCTTCTACAATGGGGCCTTCAGCTGGTGGGTTaGGTTGGAAAGGAGAGGTGTCCTTGGCCACAGGATATACCCTGT +
Preference number: 6 (lower is better)
Translates to: CCVLMLLQWGLQLVG*VGKERCPWPQDIPC
Trigger: ACAGGGTATATCCTGTGGCCAAGGACACCTCTCCTTTCCAACCAAACCCACCAGCTGAAGGCCCCATTGTAGAAGCATTAGAACACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 72 bp GTGCCCCTCCGTGAATCCGGCTCATGTGTAAACGAATaGCCCCTGAATCATCACATACCTTTCCACAGACCA +
Preference number: 6 (lower is better)
Translates to: VPLRESGSCVNE*PLNHHIPFHRP
Trigger: TGGTCTGTGGAAAGGTATGTGATGATTCAGGGGTCATTCGTTTACACATGAGCCGGATTCACGGAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS TCA 72 bp GCAGTGAAGTCTCCTCCTCTTGGGTGGTTTGCACTGTaGCTGCAGCTGCGTACCTTTGGTGGTATCAGATAT +
Preference number: 6 (lower is better)
Translates to: AVKSPPLGWFAL*LQLRTFGGIRY
Trigger: ATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAGACTTCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS GCA 72 bp TTGAGTCATATAGGCCATGTAGCTAGCAGCTCGGGCTaGAATGGAGGCAGCGTGGTAAAACCTACAACCCAT +
Preference number: 6 (lower is better)
Translates to: LSHIGHVASSSG*NGGSVVKPTTH
Trigger: ATGGGTTGTAGGTTTTACCACGCTGCCTCCATTGCAGCCCGAGCTGCTAGCTACATGGCCTATATGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS GCA 72 bp CTCCTCCTCTTGGGTGGTTTGCACTGTGACTGCAGCTaGGTACCTTTGGTGGTATCAGATATGCTATTTAAC +
Preference number: 6 (lower is better)
Translates to: LLLLGGLHCDCS*VPLVVSDMLFN
Trigger: GTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS CAA 72 bp CAGATCTTCCATGTCTTCCCAGAGTTTACGCTGATATaGAGTCATATAGGCCATGTAGCTAGCAGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: QIFHVFPEFTLI*SHIGHVASSSG
Trigger: GCCCGAGCTGCTAGCTACATGGCCTATATGACTCAATATCAGCGTAAACTCTGGGAAGACATGGAAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 90 bp GTCATGAACCAGATCTTCCATGTCTTCCCAGAGTTTACGCTGATATaGAGTCATATAGGCCATGTAGCTAGCAGCTCGGGCTGCAATGGA +
Preference number: 6 (lower is better)
Translates to: VMNQIFHVFPEFTLI*SHIGHVASSSGCNG
Trigger: TCCATTGCAGCCCGAGCTGCTAGCTACATGGCCTATATGACTCAATATCAGCGTAAACTCTGGGAAGACATGGAAGATCTGGTTCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 90 bp CTCCATGTGGGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTaGAAAGGGAACATCTTTGCACAGAGAGATCAAAAGTTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: LHVGTQCLVAGHTLN*KGNIFAQRDQKFLC
Trigger: GCAAAGAAACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
ENST00000504603.1
CDS CAA 90 bp CTCCTCCTCTTGGGTGGTTTGCACTGTGACTGCAGCTGCGTACCTTaGGTGGTATCAGATATGCTATTTAACAAGGCACACATCATATCT +
Preference number: 6 (lower is better)
Translates to: LLLLGGLHCDCSCVP*VVSDMLFNKAHIIS
Trigger: AGATATGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAAGAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS TCA 72 bp AGAGGAACATTGCAGCTAGAGCACATTTCTGGGCGATaGTTCTCAGAGGATGGCACCTTAGATTCAGGCATT +
Preference number: 6 (lower is better)
Translates to: RGTLQLEHISGR*FSEDGTLDSGI
Trigger: AATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGCTGCAATGTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS GCA 72 bp TCCTGGGAATCAAACATATCTTCACAAATCCGGCATTaGCATTTACCCCTCGGAGAACTATTTGCCGGGGAA +
Preference number: 6 (lower is better)
Translates to: SWESNISSQIRH*HLPLGELFAGE
Trigger: TTCCCCGGCAAATAGTTCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGAAGATATGTTTGATTCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS GCA 72 bp CAACAGAGGAAGTTTGAGAAACTATCCTTTCTGGACTaGTGGAACAACTCCCAGAGAAGGAGCTGCTATCTC +
Preference number: 6 (lower is better)
Translates to: QQRKFEKLSFLD*WNNSQRRSCYL
Trigger: GAGATAGCAGCTCCTTCTCTGGGAGTTGTTCCAGCAGTCCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CCA 72 bp AATGGGAAGAGGAACATTGCAGCTAGAGCACATTTCTaGGCGATGATTCTCAGAGGATGGCACCTTAGATTC +
Preference number: 6 (lower is better)
Translates to: NGKRNIAARAHF*AMILRGWHLRF
Trigger: GAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGCTGCAATGTTCCTCTTCCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CCA 72 bp TGTTCCATTCTCTTCAAAAGACCTGTGAAACTAGATTaGCTGGGGTCAGATGGCTGCCCTTTGTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: CSILFKRPVKLD*LGSDGCPLSSA
Trigger: AGCTGATGACAAAGGGCAGCCATCTGACCCCAGCCAATCTAGTTTCACAGGTCTTTTGAAGAGAATGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 72 bp GAAGTACCATCAAAGGGCAAGTGGGAGATCTTCTCCTaGGTTTTCTTAGTGAGAGATGTAAGTCGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: EVPSKGKWEIFS*VFLVRDVSRSQ
Trigger: CTGGCTTCGACTTACATCTCTCACTAAGAAAACCCAGGAGAAGATCTCCCACTTGCCCTTTGATGGTACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp GGAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTaGAAAGGGAACATCTTTGCACAGAGAGATCAAAAG +
Preference number: 6 (lower is better)
Translates to: GTQCLVAGHTLN*KGNIFAQRDQK
Trigger: CTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
ENST00000504603.1
CDS CAA 72 bp TTCCTGGGAATCAAACATATCTTCACAAATCCGGCATaGCCATTTACCCCTCGGAGAACTATTTGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: FLGIKHIFTNPA*PFTPRRTICRG
Trigger: TCCCCGGCAAATAGTTCTCCGAGGGGTAAATGGCAATGCCGGATTTGTGAAGATATGTTTGATTCCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 72 bp TTGTTCCATTCTCTTCAAAAGACCTGTGAAACTAGATaGGCTGGGGTCAGATGGCTGCCCTTTGTCATCAGC +
Preference number: 6 (lower is better)
Translates to: LFHSLQKTCETR*AGVRWLPFVIS
Trigger: GCTGATGACAAAGGGCAGCCATCTGACCCCAGCCAATCTAGTTTCACAGGTCTTTTGAAGAGAATGGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp TTGGGTGGTTTGCACTGTGACTGCAGCTGCGTACCTTaGGTGGTATCAGATATGCTATTTAACAAGGCACAC +
Preference number: 6 (lower is better)
Translates to: LGGLHCDCSCVP*VVSDMLFNKAH
Trigger: GTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS TCA 72 bp GAACGCAGTGTCTTGTGGCAGGCCACACACTTAACTTaGAAGGGAACATCTTTGCACAGAGAGATCAAAAGT +
Preference number: 6 (lower is better)
Translates to: ERSVLWQATHLT*KGTSLHREIKS
Trigger: ACTTTTGATCTCTCTGTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
ENST00000504603.1
CDS GCA 72 bp AATGCAAGTCAGAAGAAGGATCCTTGTTCCCTTCGCTaGTGTGGCAATAGAGTAAGACTGATTCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: NASQKKDPCSLR*CGNRVRLILPL
Trigger: CAGTGGAAGAATCAGTCTTACTCTATTGCCACAGCAGCGAAGGGAACAAGGATCCTTCTTCTGACTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CCA 72 bp GTGGTTTGCACTGTGACTGCAGCTGCGTACCTTTGGTaGTATCAGATATGCTATTTAACAAGGCACACATCA +
Preference number: 6 (lower is better)
Translates to: VVCTVTAAAYLW*YQICYLTRHTS
Trigger: TGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCACAGTGCAAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS TCA 72 bp TTCTGGTTCTCCAATGGGTTCTCAACAGAGGAAGTTTaGGAAACTATCCTTTCTGGACTGCTGGAACAACTC +
Preference number: 6 (lower is better)
Translates to: FWFSNGFSTEEV*ETILSGLLEQL
Trigger: GAGTTGTTCCAGCAGTCCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTGAGAACCCATTGGAGAACCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS GCA 72 bp GCAGTGAGCACAGCTGTATCTATGAAACTTGTGGCTTaGCAAAGACATGCAGTGCTGTTTTACATATTCCTG +
Preference number: 6 (lower is better)
Translates to: AVSTAVSMKLVA*QRHAVLFYIFL
Trigger: CAGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGCTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS GCA 72 bp GTGACTGCAGCTGCGTACCTTTGGTGGTATCAGATATaGTATTTAACAAGGCACACATCATATCTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: VTAAAYLWWYQI*YLTRHTSYLPL
Trigger: TAGAGGGAGATATGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGGTACGCAGCTGCAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491832.6
ENST00000508548.1
CDS CCA 72 bp GCTAGAGCACATTTCTGGGCGATGATTCTCAGAGGATaGCACCTTAGATTCAGGCATTCTATCAGTATAAGA +
Preference number: 6 (lower is better)
Translates to: ARAHFWAMILRG*HLRFRHSISIR
Trigger: TCTTATACTGATAGAATGCCTGAATCTAAGGTGCCATCCTCTGAGAATCATCGCCCAGAAATGTGCTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CAA 90 bp AAGGCTTTCTGCAGTGAGCACAGCTGTATCTATGAAACTTGTGGCTaGCCAAAGACATGCAGTGCTGTTTTACATATTCCTGGGAATCAA +
Preference number: 6 (lower is better)
Translates to: KAFCSEHSCIYETCG*PKTCSAVLHIPGNQ
Trigger: TTGATTCCCAGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGCTCACTGCAGAAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS TCA 72 bp TGCCATTTACCCCTCGGAGAACTATTTGCCGGGGAATaGTCAATAACAGTAATAGCTGATGAAGGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: CHLPLGELFAGE*SITVIADEGLL
Trigger: TAACAAGCCTTCATCAGCTATTACTGTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGGGGTAAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS TCA 72 bp ATTTTCCTCTTTAGAGGTGGAGATGTCCCAAGGAACTaGGGAGTTCTCACTTGGCCTAGAATGATGAAATCT +
Preference number: 6 (lower is better)
Translates to: IFLFRGGDVPRN*GVLTWPRMMKS
Trigger: AGATTTCATCATTCTAGGCCAAGTGAGAACTCCTCAGTTCCTTGGGACATCTCCACCTCTAAAGAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS GCA 72 bp AAGGCCTGCATCCATACCATCAGATATTATGCATCTTaGTTTTCCACGATCAAATTCTGGGTCATGAACCAG +
Preference number: 6 (lower is better)
Translates to: KACIHTIRYYAS*FSTIKFWVMNQ
Trigger: CTGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp TGCAGTGAGCACAGCTGTATCTATGAAACTTGTGGCTaGCCAAAGACATGCAGTGCTGTTTTACATATTCCT +
Preference number: 6 (lower is better)
Translates to: CSEHSCIYETCG*PKTCSAVLHIP
Trigger: AGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAAGTTTCATAGATACAGCTGTGCTCACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 72 bp GGATATGAGTGTTCATGTCGGTTAAATTCTGTGCTGTaGCCGAACATAAACTGCAGCGAAACCACAGTTTTC +
Preference number: 6 (lower is better)
Translates to: GYECSCRLNSVL*PNINCSETTVF
Trigger: GAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAACCGACATGAACACTCATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 72 bp TTTCTGGTTCTCCAATGGGTTCTCAACAGAGGAAGTTaGAGAAACTATCCTTTCTGGACTGCTGGAACAACT +
Preference number: 6 (lower is better)
Translates to: FLVLQWVLNRGS*RNYPFWTAGTT
Trigger: AGTTGTTCCAGCAGTCCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTGAGAACCCATTGGAGAACCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CAA 90 bp GCACTTGATGGATATGAGTGTTCATGTCGGTTAAATTCTGTGCTGTaGCCGAACATAAACTGCAGCGAAACCACAGTTTTCCTTTATCCA +
Preference number: 6 (lower is better)
Translates to: ALDGYECSCRLNSVL*PNINCSETTVFLYP
Trigger: TGGATAAAGGAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAACCGACATGAACACTCATATCCATCAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 90 bp TTGATCATTTTTCTGGTTCTCCAATGGGTTCTCAACAGAGGAAGTTaGAGAAACTATCCTTTCTGGACTGCTGGAACAACTCCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LIIFLVLQWVLNRGS*RNYPFWTAGTTPRE
Trigger: TTCTCTGGGAGTTGTTCCAGCAGTCCAGAAAGGATAGTTTCTCAAACTTCCTCTGTTGAGAACCCATTGGAGAACCAGAAAAATGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370708.8
ENST00000508603.5
ENST00000510989.1
CDS CAA 90 bp AAAGTTGCCAAAGGCCTGCATCCATACCATCAGATATTATGCATCTaGCTTTTCCACGATCAAATTCTGGGTCATGAACCAGATCTTCCA +
Preference number: 6 (lower is better)
Translates to: KVAKGLHPYHQILCI*LFHDQILGHEPDLP
Trigger: TGGAAGATCTGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 90 bp CATAACTCTGACTACAGAGTCCATTATGTCCCTAGTAGTACAAAGTaGCCAAAGGCCTGCATCCATACCATCAGATATTATGCATCTTGC +
Preference number: 6 (lower is better)
Translates to: HNSDYRVHYVPSSTK*PKACIHTIRYYASC
Trigger: GCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGGGACATAATGGACTCTGTAGTCAGAGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 72 bp AGATATTATGCATCTTGCTTTTCCACGATCAAATTCTaGGTCATGAACCAGATCTTCCATGTCTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: RYYASCFSTIKF*VMNQIFHVFPE
Trigger: CTCTGGGAAGACATGGAAGATCTGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 72 bp TATAGGGGTGGTTTCGAGGTTTGTACCAATCCCCTTTaGAGTATCCTCTATTGTGATAATGTGCTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: YRGGFEVCTNPL*SILYCDNVLSD
Trigger: ATCAGAAAGCACATTATCACAATAGAGGATACTCCAAAGGGGATTGGTACAAACCTCGAAACCACCCCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp TTGCTGAGAAAACATGCTTTTCTACTGCATCTTCACTaGGGAATCGCTGATTGCATTCACAGAACCAGGTTT +
Preference number: 6 (lower is better)
Translates to: LLRKHAFLLHLH*GIADCIHRTRF
Trigger: AAACCTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 72 bp AAAGGCCTGCATCCATACCATCAGATATTATGCATCTaGCTTTTCCACGATCAAATTCTGGGTCATGAACCA +
Preference number: 6 (lower is better)
Translates to: KGLHPYHQILCI*LFHDQILGHEP
Trigger: TGGTTCATGACCCAGAATTTGATCGTGGAAAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp GACTACAGAGTCCATTATGTCCCTAGTAGTACAAAGTaGCCAAAGGCCTGCATCCATACCATCAGATATTAT +
Preference number: 6 (lower is better)
Translates to: DYRVHYVPSSTK*PKACIHTIRYY
Trigger: ATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGGGACATAATGGACTCTGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS TCA 72 bp CTTGTTAGCAGTCAAATTATCCAATGTTGTAGAGGATaGTGGCAAAGTTTCACCTTCTACCTCATCCATCTC +
Preference number: 6 (lower is better)
Translates to: LVSSQIIQCCRG*WQSFTFYLIHL
Trigger: GAGATGGATGAGGTAGAAGGTGAAACTTTGCCATCATCCTCTACAACATTGGATAATTTGACTGCTAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS GCA 72 bp CATTATGTCCCTAGTAGTACAAAGTTGCCAAAGGCCTaGATCCATACCATCAGATATTATGCATCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: HYVPSSTKLPKA*IHTIRYYASCF
Trigger: AAAGCAAGATGCATAATATCTGATGGTATGGATGCAGGCCTTTGGCAACTTTGTACTACTAGGGACATAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CCA 72 bp TTAAACAGGTTATTAATTCTTGTACCCATGGCGTTCTaGAGAGTCTCCCTTCTTTCTATATCTATAGGGGTG +
Preference number: 6 (lower is better)
Translates to: LNRLLILVPMAF*RVSLLSISIGV
Trigger: CACCCCTATAGATATAGAAAGAAGGGAGACTCTCCAGAACGCCATGGGTACAAGAATTAATAACCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370708.8
CDS CAA 72 bp CCTTTCCACAGACCACACATTTATAACCCATTGTGTTaGCTGAGAAAACATGCTTTTCTACTGCATCTTCAC +
Preference number: 6 (lower is better)
Translates to: PFHRPHIYNPLC*LRKHAFLLHLH
Trigger: GTGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGTTATAAATGTGTGGTCTGTGGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 90 bp CTGAATCATCACATACCTTTCCACAGACCACACATTTATAACCCATaGTGTTTGCTGAGAAAACATGCTTTTCTACTGCATCTTCACTTG +
Preference number: 6 (lower is better)
Translates to: LNHHIPFHRPHIYNP*CLLRKHAFLLHLHL
Trigger: CAAGTGAAGATGCAGTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGTTATAAATGTGTGGTCTGTGGAAAGGTATGTGATGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 90 bp TCATGTAGCTTTATGAGTAGTGATGGTATGGTGGCCATCAAAGTCTaGATGAAGATAGTTACTGTGCAATTTCTACAGAGATGTTACAGG +
Preference number: 6 (lower is better)
Translates to: SCSFMSSDGMVAIKV*MKIVTVQFLQRCYR
Trigger: CCTGTAACATCTCTGTAGAAATTGCACAGTAACTATCTTCATCAAGACTTTGATGGCCACCATACCATCACTACTCATAAAGCTACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509251.1
CDS CAA 72 bp CACATACCTTTCCACAGACCACACATTTATAACCCATaGTGTTTGCTGAGAAAACATGCTTTTCTACTGCAT +
Preference number: 6 (lower is better)
Translates to: HIPFHRPHIYNP*CLLRKHAFLLH
Trigger: ATGCAGTAGAAAAGCATGTTTTCTCAGCAAACACAATGGGTTATAAATGTGTGGTCTGTGGAAAGGTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS CAA 90 bp AAGCCCACAGAAGTATTTAATCTTTATCTCATTGTCATGCTCATCTaGGCAATGTCGGTACAATGTTTCTATCTTATGAAAAGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: KPTEVFNLYLIVMLI*AMSVQCFYLMKRLS
Trigger: AGAAAGCCTTTTCATAAGATAGAAACATTGTACCGACATTGCCAAGATGAGCATGACAATGAGATAAAGATTAAATACTTCTGTGGGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357489.7
ENST00000370706.9
ENST00000444273.6
ENST00000491832.6
CDS TCA 72 bp AATAAGAAGTTTTTGTTATGGCAGCATTCTGTTTCTTaGTTTAGGCGCTGTTTACATAGATGTATGAGGCTT +
Preference number: 6 (lower is better)
Translates to: NKKFLLWQHSVS*FRRCLHRCMRL
Trigger: AAGCCTCATACATCTATGTAAACAGCGCCTAAATCAAGAAACAGAATGCTGCCATAACAAAAACTTCTTATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510989.1