RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF45 (Homo sapiens)

Ensembl gene IDs: ENSG00000124459

Ensembl transcript IDs: ENST00000269973.10, ENST00000588140.1, ENST00000588432.1, ENST00000589703.5, ENST00000590655.1, ENST00000615985.4

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCTaGATGTATCAGCTAATGGTCAATGTTCTGAATGCAGTCCATATG +
Preference number: 1 (lower is better)
Translates to: SDLLQIRLILPDPLV*MYQLMVNVLNAVHM
Trigger: CATATGGACTGCATTCAGAACATTGACCATTAGCTGATACATGCAGACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR TCA 90 bp GAGGCTTCTCTGCTGTGTGGTCTCCCAATCACTTGGCTGAACTACTaGCTCTATAAAACAAATGTTTTGTCTATGATAGCTCTGATTATT +
Preference number: 1 (lower is better)
Translates to: EASLLCGLPITWLNY*LYKTNVLSMIALII
Trigger: AATAATCAGAGCTATCATAGACAAAACATTTGTTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCACACAGCAGAGAAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR GCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCCTTGTGAGGCTTCTCTaGTGTGTGGTCTCCCAATCA +
Preference number: 2 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVLVRLL*CVVSQS
Trigger: TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAG...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR GCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGCTTGTGAGGCTTCTCTaGTGTGTGGTCTCCCAATCA +
Preference number: 2 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLLVRLL*CVVSQS
Trigger: TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAG...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR GCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTCCTGATCCTCTTGTCTaGATGTATCAGCTAATGGTC +
Preference number: 2 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIPDPLV*MYQLMV
Trigger: GACCATTAGCTGATACATGCAGACAAGAGGATCAGG...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR CAA 90 bp TTTCTGAACCCACTAACAAGCTGCAACCTTCAGTTTGATAAACACTaGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACT +
Preference number: 2 (lower is better)
Translates to: FLNPLTSCNLQFDKH*STRSAKMGKSGHMT
Trigger: AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAAGGTTGCAGCTTGTTAGTGGGTTCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR-3UTR TCA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCCAACGTATTAGGCACTaGAAAGGCAGAGTAGATTTG +
Preference number: 2 (lower is better)
Translates to: FSLINTCPRDLQKWENQAQRIRH*KGRVDL
Trigger: CAAATCTACTCTGCCTTTTCAGTGCCTAATACGTTG...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR-3UTR TCA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCTCCCAATCACTTGGCTaGACTACTGACTCTATAAAA +
Preference number: 2 (lower is better)
Translates to: FSLINTCPRDLQKWENQASQSLG*TTDSIK
Trigger: TTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGA...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGGTCAATGTTCTGAATaGAGTCCATATGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: FSISILVLLIYSRSDSSFGQCSE*SPYVST
Trigger: AGTGGAGACATATGGACTGCATTCAGAACATTGACC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR GCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGACCTGATCCTCTTGTCTaGATGTATCAGCTAATGGTC +
Preference number: 2 (lower is better)
Translates to: SSGTEFSISILVLLIYSRPDPLV*MYQLMV
Trigger: GACCATTAGCTGATACATGCAGACAAGAGGATCAGG...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCTCCCAATCACTTGGCTaGACTACTGACTCTATAAAA +
Preference number: 2 (lower is better)
Translates to: FSISILVLLIYSRSDSSFSQSLG*TTDSIK
Trigger: TTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGA...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR GCA 72 bp TGTCTGCATGTATCAGCTAATGGTCAATGTTCTGAATaGAGTCCATATGTCTCCACTCTTGTGAGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: CLHVSANGQCSE*SPYVSTLVRLL
Trigger: GAGAAGCCTCACAAGAGTGGAGACATATGGACTGCATTCAGAACATTGACCATTAGCTGATACATGCAGACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR CAA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTTGGTCTCCCAATCACTaGGCTGAACTACTGACTCTA +
Preference number: 3 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTWSPNH*AELLTL
Trigger: TAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCA...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR GCA 72 bp AAAAGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTaGCCTCTTGGATCTTATATTCTAGTGGAACAGAAT +
Preference number: 3 (lower is better)
Translates to: KRQSRFGSQQSP*PLGSYILVEQN
Trigger: ATTCTGTTCCACTAGAATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR-3UTR CAA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCTGGTCTCCCAATCACTaGGCTGAACTACTGACTCTA +
Preference number: 3 (lower is better)
Translates to: FSISILVLLIYSRSDSSFWSPNH*AELLTL
Trigger: TAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCA...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR-3UTR CAA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATGGTCTCCCAATCACTaGGCTGAACTACTGACTCTA +
Preference number: 3 (lower is better)
Translates to: SSGTEFSISILVLLIYSRWSPNH*AELLTL
Trigger: TAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCA...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR TCA 72 bp CTGCTGTGTGGTCTCCCAATCACTTGGCTGAACTACTaGCTCTATAAAACAAATGTTTTGTCTATGATAGCT +
Preference number: 3 (lower is better)
Translates to: LLCGLPITWLNY*LYKTNVLSMIA
Trigger: AGCTATCATAGACAAAACATTTGTTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCACACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
3UTR TCA 72 bp TCAAATACTACTGAAAAATTACAACGTATTAGGCACTaGAAAGGCAGAGTAGATTTGGCAGTCAACAAAGTC +
Preference number: 3 (lower is better)
Translates to: SNTTEKLQRIRH*KGRVDLAVNKV
Trigger: GACTTTGTTGACTGCCAAATCTACTCTGCCTTTTCAGTGCCTAATACGTTGTAATTTTTCAGTAGTATTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGTCACAGTGGGGCTCTaGTGCCAGAAGCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPVTVGL*CQKPGC
Trigger: GCATCCTGGCTTCTGGCAGCAGAGCCCCACTGTGAC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGAAGCTGAGGCTTGGTaGGGTCAAGAGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPEAEAW*GQEAGT
Trigger: TGTTCCTGCCTCTTGACCTCACCAAGCCTCAGCTTC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCGGACTGATGCCCCACTaGGACCACATTCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIGLMPH*DHIPEV
Trigger: AACTTCAGGAATGTGGTCTCAGTGGGGCATCAGTCC...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCCCAGTGTGGCCTCTTTaGTGGGCCAGAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIPVWPL*WARRFE
Trigger: CTCAAATCTTCTGGCCCATCAAAGAGGCCACACTGG...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGGCTGGAGAACTGACTaGAGGCCTTACCACACCTCT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSGWRTD*RPYHTS
Trigger: AGAGGTGTGGTAAGGCCTTCAGTCAGTTCTCCAGCC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGTGGACTCCACGATGTaGCAGAAAATTGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSVDSTM*QKIGGP
Trigger: CGGGCCTCCAATTTTCTGGCACATCGTGGAGTCCAC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCGATGTGCCAGAAAATTaGAGGCCCGACAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIDVPEN*RPDRSP
Trigger: AGGGCTTCTGTCGGGCCTCCAATTTTCTGGCACATC...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAAAGTGCGAGCCCTGCTaGTCCTACGACCAAACCATA +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSKCEPC*SYDQTI
Trigger: TATGGTTTGGTCGTAGGATCAGCAGGGCTCGCACTT...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCACCAGACGCCACCTGTTaGGTGATGCACTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPPDATC*VMHSFL
Trigger: TAAGAAAGAGTGCATCACTCAACAGGTGGCGTCTGG...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGATATGATCTCTGACTaGAGCCCACCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSDMISD*SPPHTP
Trigger: AGGAGTGTGGGGTGGGCTTCAGTCAGAGATCATATC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCACCAGTATGGCCTCTTTaGTGGTCCAGCAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPPVWPL*WSSRFE
Trigger: CTCAAATCTGCTGGACCATCAAAGAGGCCATACTGG...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACCAGTGTGGCCTCTTTaGTGGGCCAGAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSPVWPL*WARRFE
Trigger: CTCAAATCTTCTGGCCCATCAAAGAGGCCACACTGG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATGGGCTTGAAGCTGTaGACCTACACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPMGLKL*TYTEAL
Trigger: AAGGGCTTCAGTGTAGGTTCACAGCTTCAAGCCCAT...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCGGTAGGATCTCTGTCTaGAGCGCTTACCACACACAT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIGRISV*SAYHTH
Trigger: ATGTGTGTGGTAAGCGCTTCAGACAGAGATCCTACC...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCCTTGTGAGGCTTCTCTaGTGTGTGGTCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPILVRLL*CVVSQS
Trigger: TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAG...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATGGGCTTGAAGACTTaGAAACCGACGGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIMGLKT*KPTEGI
Trigger: AATGCCTTCCGTCGGTTTTCAAGTCTTCAAGCCCAT...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGGTAGGATCTCTGTCTaGAGCGCTTACCACACACAT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSGRISV*SAYHTH
Trigger: ATGTGTGTGGTAAGCGCTTCAGACAGAGATCCTACC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATGGGCTTGAAGGTATaGGCTCCAGCTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIMGLKV*APAEDF
Trigger: AAAGTCTTCAGCTGGAGCTCATACCTTCAAGCCCAT...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGAAGCTACAGAGCTGTaGGAGGTGGGGGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTEATEL*EVGEGG
Trigger: CCCGCCTTCCCCCACCTCCCACAGCTCTGTAGCTTC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATTGTCCTCCTCCTTCTaGAGAAGTGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSLSSSF*RSAKSV
Trigger: CACAGACTTGGCACTTCTCCAGAAGGAGGAGGACAA...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAATGGGCTTGAAGGTATaGGCTCCAGCTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSMGLKV*APAEDF
Trigger: AAAGTCTTCAGCTGGAGCTCATACCTTCAAGCCCAT...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACTCCTTCTGGAGAAGTaGCAAGTCTGTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSLLLEK*QVCEEA
Trigger: AGCTTCTTCACAGACTTGGCACTTCTCCAGAAGGAG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCGTCCTTGAATGTCACTaGCTCCTTAGACTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIVLECH*LLRLRH
Trigger: ATGACGAAGTCTAAGGAGGCAGTGACATTCAAGGAC...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACTCCTTCTGGAGAAGTaGCAAGTCTTAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSLLLEK*QVLRGK
Trigger: CTTCCCTCTTAAGACTTGGCACTTCTCCAGAAGGAG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589703.5
CDS-3UTR CCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTGTAGGCCATCTGGTGTaGACTGATGCCCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIVGHLV*TDAPLR
Trigger: TCTCAGTGGGGCATCAGTCCACACCAGATGGCCTAC...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCTGTTGCCAGATCTaGGAGCAGAAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPICCQI*EQKSSS
Trigger: TGAAGAGCTTTTCTGCTCCCAGATCTGGCAACAGAT...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACAGAAAAGCTCTTCATaGGGCAGGTACCTTAATCCT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSQKSSS*GRYLNP
Trigger: AGGATTAAGGTACCTGCCTCATGAAGAGCTTTTCTG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGTGTGGATTCGCTCATaGGCCTGCAGTCGTGAACGC +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTVWIRS*ACSRER
Trigger: GCGTTCACGACTGCAGGCTCATGAGCGAATCCACAC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCGGCTGGAGAACTGACTaGAGGCCTTACCACACCTCT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVGWRTD*RPYHTS
Trigger: AGAGGTGTGGTAAGGCCTTCAGTCAGTTCTCCAGCC...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATGAATGATAAGACTTaGGCTCCAACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPIMNDKT*APTEAL
Trigger: AAGGGCTTCAGTTGGAGCTCAAGTCTTATCATTCAT...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCACAACGTATTAGGCACTaGAAAGGCAGAGTAGATTTG +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPQRIRH*KGRVDL
Trigger: CAAATCTACTCTGCCTTTTCAGTGCCTAATACGTTG...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCTTGCTAGCCAGAAACTaGTTTCTGAACCCACTAACA +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPILLARN*FLNPLT
Trigger: TGTTAGTGGGTTCAGAAATCAGTTTCTGGCTAGCAA...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCAACTCCGCCCTCCGCTaGTCGCCGCAGCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFNSALR*SPQRLF
Trigger: GAAAAGACGCTGCGGCGAGCAGCGGAGGGCGGAGTT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGTTATCTCTCTGGGTTaGCATCTTCATCATCCACAG +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSVISLG*HLHHPQ
Trigger: CTGTGGATGATGAAGATGGCAACCCAGAGAGATAAC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGGTCAATGTTCTGAATaGAGTCCATATGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPGQCSE*SPYVST
Trigger: AGTGGAGACATATGGACTGCATTCAGAACATTGACC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCAGCGTCTTTTCCTGCTaGCCGAAGTGCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFSVFSC*PKCEPC
Trigger: GCAGGGCTCGCACTTCGGTCAGCAGGAAAAGACGCT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCCTTGCTGGGTACTCTTaGGAAGAATATGATAATGTC +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPILAGYS*EEYDNV
Trigger: GACATTATCATATTCTTCTCAAGAGTACCCAGCAAG...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCTGCATCATTTGTGTATaGTTTTGCTCTACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: QSICLHSCEASLLCGLPICIICV*FCSTVD
Trigger: GTCCACAGTAGAGCAAAATCATACACAAATGATGCA...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCGATATGATCTCTGACTaGAGCCCACCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVDMISD*SPPHTP
Trigger: AGGAGTGTGGGGTGGGCTTCAGTCAGAGATCATATC...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTGTGGATTCGCTCATaGGCCTGCAGTCGTGAACGC +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLVWIRS*ACSRER
Trigger: GCGTTCACGACTGCAGGCTCATGAGCGAATCCACAC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATGGTCCAGCAGATTTaGGGCCCGGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLMVQQI*GPAEAF
Trigger: AAAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCAT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTATGGGCTTGAAGCTGTaGACCTACACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIMGLKL*TYTEAL
Trigger: AAGGGCTTCAGTGTAGGTTCACAGCTTCAAGCCCAT...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTAGGAGGCTGGGAGATTaGACGATCTTGTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIRRLGD*TILSEI
Trigger: GATCTCAGACAAGATCGTGCAATCTCCCAGCCTCCT...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGGTCAATGTTCTGAATaGAGTCCATATGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSGQCSE*SPYVST
Trigger: AGTGGAGACATATGGACTGCATTCAGAACATTGACC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTTCCACGAGAGGAATaGAGGCCGCGCTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFLPREE*RPRSQP
Trigger: AGGTTGAGAGCGCGGCCTTCATTCCTCTCGTGGAAG...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCATTCCAGATTCCACTTaGCCCTTCAGCAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVIPDST*PFSREP
Trigger: AGGCTCTCTGCTGAAGGGTCAAGTGGAATCTGGAAT...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGGACTGATGCCCCACTaGGACCACATTCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTGLMPH*DHIPEV
Trigger: AACTTCAGGAATGTGGTCTCAGTGGGGCATCAGTCC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGGGACTGATGCCCCACTaGGACCACATTCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLGLMPH*DHIPEV
Trigger: AACTTCAGGAATGTGGTCTCAGTGGGGCATCAGTCC...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCACTTAATCCTACTTCTTaGAGAGTCTCCATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: MQSICLHSCEASLLCGLPLNPTS*RVSISF
Trigger: AAAAGAGATGGAGACTCTTCAAGAAGTAGGATTAAG...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCGATATGATCTCTGACTaGAGCCCACCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: FSLINTCPRDLQKWENQADMISD*SPPHTP
Trigger: AGGAGTGTGGGGTGGGCTTCAGTCAGAGATCATATC...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATGAGCCTGCAGTCGTaGACGCCAACTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLMSLQS*TPTEAL
Trigger: AAGAGCTTCAGTTGGCGTTCACGACTGCAGGCTCAT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGTGTGGATTCGCTCATaGGCCTGCAGTCGTGAACGC +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFVWIRS*ACSRER
Trigger: GCGTTCACGACTGCAGGCTCATGAGCGAATCCACAC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTATGGTCCAGCAGATTTaGGGCCCGGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLMVQQI*GPAEAF
Trigger: AAAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCAT...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATCCCAATCACTTGGCTaGACTACTGACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSSQSLG*TTDSIK
Trigger: TTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGA...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTGATGATGGGGAAACATaGGCTGGATTCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIDDGET*AGFQIP
Trigger: TGGAATCTGGAATCCAGCCCATGTTTCCCCATCATC...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTAGGCCATCTGGTGTaGACTGATGCCCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLVGHLV*TDAPLR
Trigger: TCTCAGTGGGGCATCAGTCCACACCAGATGGCCTAC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTTTGCACGATCTTGTCTaGGATCCTGGAAAATCCACA +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYILHDLV*DPGKST
Trigger: TGTGGATTTTCCAGGATCTCAGACAAGATCGTGCAA...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCAACAGGCGAGGAAGCTaGGGCTTGGTGAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFNRRGS*GLVRSR
Trigger: TCTTGACCTCACCAAGCCTCAGCTTCCTCGCCTGTT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACTTAATCCTACTTCTTaGAGAGTCTCCATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSLNPTS*RVSISF
Trigger: AAAAGAGATGGAGACTCTTCAAGAAGTAGGATTAAG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCATGGGCTTGAAGACTTaGAAACCGACGGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVMGLKT*KPTEGI
Trigger: AATGCCTTCCGTCGGTTTTCAAGTCTTCAAGCCCAT...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATGGGCCTGAAGGTGTaGACCCACACTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLMGLKV*THTETF
Trigger: AAAGGTTTCAGTGTGGGTTCACACCTTCAGGCCCAT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCATGGTCCAGCAGATTTaGGGCCCGGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFMVQQI*GPAEAF
Trigger: AAAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCAT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTCCAGTATGGCCTCTTTaGTGGTCCAGCAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTPVWPL*WSSRFE
Trigger: CTCAAATCTGCTGGACCATCAAAGAGGCCATACTGG...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGAAAATCAGGCCATATaGCTAACTTATATATCCTCC +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSENQAI*LTYISS
Trigger: GGAGGATATATAAGTTAGTCATATGGCCTGATTTTC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTAGTAAGGCAATCAGCTaGCCAGCCATTCAACTCCGC +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLSKAIS*PAIQLR
Trigger: GCGGAGTTGAATGGCTGGGCAGCTGATTGCCTTACT...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGTGGACTCCACGATGTaGCAGAAAATTGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFVDSTM*QKIGGP
Trigger: CGGGCCTCCAATTTTCTGGCACATCGTGGAGTCCAC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTCTTGTGAGGCTTCTCTaGTGTGTGGTCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTLVRLL*CVVSQS
Trigger: TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAG...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGTGCATGTTACTGCATaGAGATTACACCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSVHVTA*RLHLNK
Trigger: TTTATTGAGGTGTAATCTGCATGCAGTAACATGCAC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCTGTCTCTCTGTTGCTTaGAGTCTGCAGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVCLSVA*SLQLHM
Trigger: CATGTGAAGCTGCAGACTCCAAGCAACAGAGAGACA...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CCA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCTTGTCCTCCTCCTTCTaGAGAAGTGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSLINTCPRDLQKWENQALSSSF*RSAKSV
Trigger: CACAGACTTGGCACTTCTCCAGAAGGAGGAGGACAA...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATGTGCCAGAAAATTaGAGGCCCGACAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLDVPEN*RPDRSP
Trigger: AGGGCTTCTGTCGGGCCTCCAATTTTCTGGCACATC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCATGAGCCTGCAGTCGTaGACGCCAACTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFMSLQS*TPTEAL
Trigger: AAGAGCTTCAGTTGGCGTTCACGACTGCAGGCTCAT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGAGGCTGGAGAACTGACTaGAGGCCTTACCACACCTCT +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRGWRTD*RPYHTS
Trigger: AGAGGTGTGGTAAGGCCTTCAGTCAGTTCTCCAGCC...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTCTCCTTCTGGAGAAGTaGCAAGTCTGTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTLLLEK*QVCEEA
Trigger: AGCTTCTTCACAGACTTGGCACTTCTCCAGAAGGAG...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCGTCCTTGAATGTCACTaGCTCCTTAGACTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVVLECH*LLRLRH
Trigger: ATGACGAAGTCTAAGGAGGCAGTGACATTCAAGGAC...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGAGTGGACTCCACGATGTaGCAGAAAATTGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRVDSTM*QKIGGP
Trigger: CGGGCCTCCAATTTTCTGGCACATCGTGGAGTCCAC...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGTGCCTATGCTCAGCTaGCATTTTAGGGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTVPMLS*HFREFS
Trigger: TGAGAACTCCCTAAAATGCCAGCTGAGCATAGGCAC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGATGTGCCAGAAAATTaGAGGCCCGACAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFDVPEN*RPDRSP
Trigger: AGGGCTTCTGTCGGGCCTCCAATTTTCTGGCACATC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTAAGTCCCTGCCCTCTTaGATCTTATATTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIKSLPS*ILYSSG
Trigger: TCCACTAGAATATAAGATCCAAGAGGGCAGGGACTT...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGCAGAAAAGCTCTTCATaGGGCAGGTACCTTAATCCT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLQKSSS*GRYLNP
Trigger: AGGATTAAGGTACCTGCCTCATGAAGAGCTTTTCTG...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGAGGAGCTTGACAATGTaGGCTTTTCCCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLRSLTM*AFPNIP
Trigger: AGGAATGTTGGGAAAAGCTCACATTGTCAAGCTCCT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGACCAGTGTGGCCTCTTTaGTGGGCCAGAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRPVWPL*WARRFE
Trigger: CTCAAATCTTCTGGCCCATCAAAGAGGCCACACTGG...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCATGAATGATAAGACTTaGGCTCCAACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVMNDKT*APTEAL
Trigger: AAGGGCTTCAGTTGGAGCTCAAGTCTTATCATTCAT...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGACACCTAAACTTCTGTaGCTATGCTCAGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLTPKLL*LCSAGI
Trigger: AATGCCAGCTGAGCATAGGCACAGAAGTTTAGGTGT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGTCCTTGAATGTCACTaGCTCCTTAGACTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTVLECH*LLRLRH
Trigger: ATGACGAAGTCTAAGGAGGCAGTGACATTCAAGGAC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTGTTATCTCTCTGGGTTaGCATCTTCATCATCCACAG +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTVISLG*HLHHPQ
Trigger: CTGTGGATGATGAAGATGGCAACCCAGAGAGATAAC...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCGGTCAATGTTCTGAATaGAGTCCATATGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVGQCSE*SPYVST
Trigger: AGTGGAGACATATGGACTGCATTCAGAACATTGACC...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGCCTGATCCTCTTGTCTaGATGTATCAGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLPDPLV*MYQLMV
Trigger: GACCATTAGCTGATACATGCAGACAAGAGGATCAGG...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCTGCAGCTTCACATaGCTTGATGATGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLVCSFT*LDDGET
Trigger: TGTTTCCCCATCATCAAGCCATGTGAAGCTGCAGAC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATCTGTTGCCAGATCTaGGAGCAGAAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLICCQI*EQKSSS
Trigger: TGAAGAGCTTTTCTGCTCCCAGATCTGGCAACAGAT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCAACAGAAGAGGAAGGTaGATGCTAGGTCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFNRRGR*MLGPVT
Trigger: TGTGACAGGACCTAGCATTCACCTTCCTCTTCTGTT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCATGGGCTTGAAGACTTaGAAACCGACGGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFMGLKT*KPTEGI
Trigger: AATGCCTTCCGTCGGTTTTCAAGTCTTCAAGCCCAT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCATGGGCCTGAAGGTGTaGACCCACACTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIMGLKV*THTETF
Trigger: AAAGGTTTCAGTGTGGGTTCACACCTTCAGGCCCAT...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCATGGGCTTGAAGCTGTaGACCTACACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIMGLKL*TYTEAL
Trigger: AAGGGCTTCAGTGTAGGTTCACAGCTTCAAGCCCAT...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCTTGCTAGCCAGAAACTaGTTTCTGAACCCACTAACA +
Preference number: 4 (lower is better)
Translates to: FSLINTCPRDLQKWENQALLARN*FLNPLT
Trigger: TGTTAGTGGGTTCAGAAATCAGTTTCTGGCTAGCAA...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCTCTCTTTTAGATTCTTaGCTCCTGAGGAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVSLLDS*LLRSYL
Trigger: GAGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGA...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTGCATCATTTGTGTATaGTTTTGCTCTACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLCIICV*FCSTVD
Trigger: GTCCACAGTAGAGCAAAATCATACACAAATGATGCA...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCTCAGCAGAGAGCCTCTaGACAGTGAAAAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFSAESL*TVKNGV
Trigger: AACTCCATTTTTCACTGTGCAGAGGCTCTCTGCTGA...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGTTATCTCTCTGGGTTaGCATCTTCATCATCCACAG +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFVISLG*HLHHPQ
Trigger: CTGTGGATGATGAAGATGGCAACCCAGAGAGATAAC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCCTGATCCTCTTGTCTaGATGTATCAGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFPDPLV*MYQLMV
Trigger: GACCATTAGCTGATACATGCAGACAAGAGGATCAGG...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATATCCTCCAAGCCTTaGAGAATTCTTCTGAGTACA +
Preference number: 4 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLISSKP*RILLST
Trigger: TGTACTCAGAAGAATTCTGCAAGGCTTGGAGGATAT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTATATCCTCCAAGCCTTaGAGAATTCTTCTGAGTACA +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTISSKP*RILLST
Trigger: TGTACTCAGAAGAATTCTGCAAGGCTTGGAGGATAT...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCAACCCACTAACAAGCTaGAACCTTCAGTTTGATAAA +
Preference number: 4 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVNPLTS*NLQFDK
Trigger: TTTATCAAACTGAAGGTTGCAGCTTGTTAGTGGGTT...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTAAGTCCCTGCCCTCTTaGATCTTATATTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLKSLPS*ILYSSG
Trigger: TCCACTAGAATATAAGATCCAAGAGGGCAGGGACTT...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGACAGAAAAGCTCTTCATaGGGCAGGTACCTTAATCCT +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRQKSSS*GRYLNP
Trigger: AGGATTAAGGTACCTGCCTCATGAAGAGCTTTTCTG...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGAAGGAGCTTGACAATGTaGGCTTTTCCCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRRSLTM*AFPNIP
Trigger: AGGAATGTTGGGAAAAGCTCACATTGTCAAGCTCCT...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCAGGAGCTTGACAATGTaGGCTTTTCCCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIRSLTM*AFPNIP
Trigger: AGGAATGTTGGGAAAAGCTCACATTGTCAAGCTCCT...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCATGAATGATAAGACTTaGGCTCCAACTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFMNDKT*APTEAL
Trigger: AAGGGCTTCAGTTGGAGCTCAAGTCTTATCATTCAT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTTCCCAATCACTTGGCTaGACTACTGACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLSQSLG*TTDSIK
Trigger: TTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGA...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR GCA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTAACCCACTAACAAGCTaGAACCTTCAGTTTGATAAA +
Preference number: 4 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTNPLTS*NLQFDK
Trigger: TTTATCAAACTGAAGGTTGCAGCTTGTTAGTGGGTT...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTTCTCTTTTAGATTCTTaGCTCCTGAGGAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLSLLDS*LLRSYL
Trigger: GAGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGA...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGAATCTGTTGCCAGATCTaGGAGCAGAAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRICCQI*EQKSSS
Trigger: TGAAGAGCTTTTCTGCTCCCAGATCTGGCAACAGAT...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCGGGAACTCTGATTACTaGATCCCTCATCTTTATAGT +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFGNSDY*IPHLYS
Trigger: ACTATAAAGATGAGGGATTCAGTAATCAGAGTTCCC...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCAACGTATTAGGCACTaGAAAGGCAGAGTAGATTTG +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIQRIRH*KGRVDL
Trigger: CAAATCTACTCTGCCTTTTCAGTGCCTAATACGTTG...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGAAAATCAGGCCATATaGCTAACTTATATATCCTCC +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLENQAI*LTYISS
Trigger: GGAGGATATATAAGTTAGTCATATGGCCTGATTTTC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR GCA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTGCATGTTACTGCATaGAGATTACACCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLVHVTA*RLHLNK
Trigger: TTTATTGAGGTGTAATCTGCATGCAGTAACATGCAC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CCA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCTCTCTTTTAGATTCTTaGCTCCTGAGGAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: FSISILVLLIYSRSDSSFSLLDS*LLRSYL
Trigger: GAGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGA...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCGGGAACTCTGATTACTaGATCCCTCATCTTTATAGT +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIGNSDY*IPHLYS
Trigger: ACTATAAAGATGAGGGATTCAGTAATCAGAGTTCCC...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCTGCATCATTTGTGTATaGTTTTGCTCTACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLICIICV*FCSTVD
Trigger: GTCCACAGTAGAGCAAAATCATACACAAATGATGCA...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCCCAATCACTTGGCTaGACTACTGACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRSQSLG*TTDSIK
Trigger: TTTTATAGAGTCAGTAGTTCAGCCAAGTGATTGGGA...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR TCA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGACTTAATCCTACTTCTTaGAGAGTCTCCATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSGTEFSISILVLLIYSRLNPTS*RVSISF
Trigger: AAAAGAGATGGAGACTCTTCAAGAAGTAGGATTAAG...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
3UTR CAA 72 bp ATGATTACATTTGTCAAAATTCAGAAAGCCATGAACTaGAGACTTGTGCATGTTACTGCATGCAGATTACAC +
Preference number: 4 (lower is better)
Translates to: MITFVKIQKAMN*RLVHVTACRLH
Trigger: GTGTAATCTGCATGCAGTAACATGCACAAGTCTCAAGTTCATGGCTTTCTGAATTTTGACAAATGTAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS GCA 90 bp AACCGCCCCGAACGCAGCAGCTCCGGATACAGTAAGGCAATCAGCTaGCCAGCCATTCAACTCCGCCCTCCGCTGCTCGCCGCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: NRPERSSSGYSKAIS*PAIQLRPPLLAAAS
Trigger: AGACGCTGCGGCGAGCAGCGGAGGGCGGAGTTGAATGGCTGGGCAGCTGATTGCCTTACTGTATCCGGAGCTGCTGCGTTCGGGGCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS CCA 90 bp CTTTCCCAACGTTACACCGCTAGGAAGCTACAGAGCTGTGGGAGGTaGGGGAAGGCGGGTCGGGCCGCTGAGAGCCCAGGAGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: LSQRYTARKLQSCGR*GKAGRAAESPGDPQ
Trigger: CTGAGGATCTCCTGGGCTCTCAGCGGCCCGACCCGCCTTCCCCCACCTCCCACAGCTCTGTAGCTTCCTAGCGGTGTAACGTTGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS TCA 90 bp CAGAGGTCCCTGAAGTCTTCTCGCACTCGGAACAGAAGAGGAAGGTaGATGCTAGGTCCTGTCACAGTGGGGCTCTGCTGCCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QRSLKSSRTRNRRGR*MLGPVTVGLCCQKP
Trigger: TGGCTTCTGGCAGCAGAGCCCCACTGTGACAGGACCTAGCATTCACCTTCCTCTTCTGTTCCGAGTGCGAGAAGACTTCAGGGACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000588432.1
ENST00000590655.1
CDS-3UTR CAA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGATGGTCCAGCAGATTaGAGGCCCGGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSDGPAD*RPGRSL
Trigger: AAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCATC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCACGATGTGCCAGAAAATaGGAGGCCCGACAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSRCARK*EARQKP
Trigger: GGGCTTCTGTCGGGCCTCCAATTTTCTGGCACATCG...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGACCCTCTGGTGGGCTaGAAGGTAGGATCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPDPLVG*KVGSLS
Trigger: AGACAGAGATCCTACCTTCAAGCCCACCAGAGGGTC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAAATCTTGTCTCTCTGTaGCTTGGAGTCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPNLVSL*LGVCSF
Trigger: GAAGCTGCAGACTCCAAGCAACAGAGAGACAAGATT...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGATGAAGGAAAGTCCTaGTCACCCTCATCATCAGCA +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPDEGKS*SPSSSA
Trigger: TGCTGATGATGAGGGTGACAAGGACTTTCCTTCATC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCATGGTCTCCCAATCACTaGGCTGAACTACTGACTCTA +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPWSPNH*AELLTL
Trigger: TAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCA...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS TCA 90 bp GACGACAATTGTATCCATTTAACAGGCGAGGAAGCTGAGGCTTGGTaGGGTCAAGAGGCAGGAACAGTACCTGAATCCAGCTTTCATACC +
Preference number: 5 (lower is better)
Translates to: DDNCIHLTGEEAEAW*GQEAGTVPESSFHT
Trigger: GGTATGAAAGCTGGATTCAGGTACTGTTCCTGCCTCTTGACCTCACCAAGCCTCAGCTTCCTCGCCTGTTAAATGGATACAATTGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAGTGGACTCTGTGAACTaGAAGATGGGAACTCTGATT +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPVDSVN*KMGTLI
Trigger: AATCAGAGTTCCCATCTTCAAGTTCACAGAGTCCAC...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCGTGGACTCTGTGAACTaGAAGATGGGAACTCTGATT +
Preference number: 5 (lower is better)
Translates to: QSICLHSCEASLLCGLPIVDSVN*KMGTLI
Trigger: AATCAGAGTTCCCATCTTCAAGTTCACAGAGTCCAC...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAGATGAAGGAAAGTCCTaGTCACCCTCATCATCAGCA +
Preference number: 5 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSDEGKS*SPSSSA
Trigger: TGCTGATGATGAGGGTGACAAGGACTTTCCTTCATC...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGGATGGTCCAGCAGATTaGAGGCCCGGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLDGPAD*RPGRSL
Trigger: AAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCATC...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCATATATCCTCCAAGCCTaGCAGAATTCTTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPYILQA*QNSSEY
Trigger: GTACTCAGAAGAATTCTGCAAGGCTTGGAGGATATA...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS TCA 90 bp GAGAAGTGCCAAGTCTGTGAAGAAGCTACTGTTGTATCAGTTGTGTaGCCTTGGTCCAAACACCTAAACTTCTGTGCCTATGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: EKCQVCEEATVVSVV*PWSKHLNFCAYAQL
Trigger: CAGCTGAGCATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCACACAACTGATACAACAGTAGCTTCTTCACAGACTTGGCACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTTCCAGACGCCACCTGTaGAGTGATGCACTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYISRRHL*SDALFL
Trigger: AAGAAAGAGTGCATCACTCAACAGGTGGCGTCTGGA...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCAATCAGTTGTGTGACCTaGGTCCAAACACCTAAACTT +
Preference number: 5 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSISCVT*VQTPKL
Trigger: AAGTTTAGGTGTTTGGACCAAGGTCACACAACTGAT...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp AGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCATCCTGCATGAGCCCTTaGGTTAATTTGAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: SPYVSTLVRLLCCVVSQSSCMSP*VNLKMR
Trigger: TCTCATCTTCAAATTAACCAAAGGGCTCATGCAGGA...TGATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATGCAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCACATTTGTGTATGATTTaGCTCTACTGTGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: MQSICLHSCEASLLCGLPHLCMI*LYCGLS
Trigger: AGAGAGTCCACAGTAGAGCAAAATCATACACAAATG...TGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp CAGTCCATATGTCTCCACTCTTGTGAGGCTTCTCTGCTGTGTGGTCTCCCAATCCATTTGTGTATGATTTaGCTCTACTGTGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: QSICLHSCEASLLCGLPIHLCMI*LYCGLS
Trigger: AGAGAGTCCACAGTAGAGCAAAATCATACACAAATG...GATTGGGAGACCACACAGCAGAGAAGCCTCACAAGAGTGGAGACATATGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGATGGTCCAGCAGATTaGAGGCCCGGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLDGPAD*RPGRSL
Trigger: AAGGCTTCTGCCGGGCCTCAAATCTGCTGGACCATC...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCGACCCTCTGGTGGGCTaGAAGGTAGGATCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FSLINTCPRDLQKWENQADPLVG*KVGSLS
Trigger: AGACAGAGATCCTACCTTCAAGCCCACCAGAGGGTC...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS TCA 90 bp ACTTCGTCATTTTGTCCTCCTCCTTCTGGAGAAGTGCCAAGTCTGTaGAGAAGCTACTGTTGTATCAGTTGTGTGACCTTGGTCCAAACA +
Preference number: 5 (lower is better)
Translates to: TSSFCPPPSGEVPSL*RSYCCISCVTLVQT
Trigger: TGTTTGGACCAAGGTCACACAACTGATACAACAGTAGCTTCTTCACAGACTTGGCACTTCTCCAGAAGGAGGAGGACAAAATGACGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS TCA 90 bp GCAAGCTGTAGCACCCAAAATCCAGATGCCTGTTGGAGAGCTACATaGATCACTTACTCACTGAATAACTCCTCTTTGCAAACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ASCSTQNPDACWRAT*ITYSLNNSSLQTSC
Trigger: GCAAGAGGTTTGCAAAGAGGAGTTATTCAGTGAGTAAGTGATTCATGTAGCTCTCCAACAGGCATCTGGATTTTGGGTGCTACAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590655.1
CDS CCA 90 bp AATGTCACTGCCTCCTTAGACTTCGTCATTTTGTCCTCCTCCTTCTaGAGAAGTGCCAAGTCTGTGAAGAAGCTACTGTTGTATCAGTTG +
Preference number: 5 (lower is better)
Translates to: NVTASLDFVILSSSF*RSAKSVKKLLLYQL
Trigger: CAACTGATACAACAGTAGCTTCTTCACAGACTTGGCACTTCTCCAGAAGGAGGAGGACAAAATGACGAAGTCTAAGGAGGCAGTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTTTGTCTCTCTGTTGCTaGGAGTCTGCAGCTTCACAT +
Preference number: 5 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYILSLCC*ESAASH
Trigger: ATGTGAAGCTGCAGACTCCAAGCAACAGAGAGACAA...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS GCA 90 bp ATCAGTTGTGTGACCTTGGTCCAAACACCTAAACTTCTGTGCCTATaGTCAGCTGGCATTTTAGGGAGTTCTCAACAGATGATAATGACG +
Preference number: 5 (lower is better)
Translates to: ISCVTLVQTPKLLCL*SAGILGSSQQMIMT
Trigger: CGTCATTATCATCTGTTGAGAACTCCCTAAAATGCCAGCTGAGCATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCACACAACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCCTCTCTTGTAATCTGTaGCCAGATCTGGGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVLSCNL*PDLGAE
Trigger: TTCTGCTCCCAGATCTGGCAACAGATTACAAGAGAG...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCGATGAAGGAAAGTCCTaGTCACCCTCATCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVDEGKS*SPSSSA
Trigger: TGCTGATGATGAGGGTGACAAGGACTTTCCTTCATC...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp CTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCTGGTCTCCCAATCACTaGGCTGAACTACTGACTCTA +
Preference number: 5 (lower is better)
Translates to: LSTSDLLQIRLILPDPLVWSPNH*AELLTL
Trigger: TAGAGTCAGTAGTTCAGCCAAGTGATTGGGAGACCA...GACAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp AGGCAGAGTAGATTTGGCAGTCAACAAAGTCCCTGCCCTCTTGGATCTTATATTAAAGGCAGAGTAGATTaGGCAGTCAACAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RQSRFGSQQSPCPLGSYIKGRVD*AVNKVP
Trigger: AGGGACTTTGTTGACTGCCAAATCTACTCTGCCTTT...AATATAAGATCCAAGAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS GCA 90 bp TGTTGTATCAGTTGTGTGACCTTGGTCCAAACACCTAAACTTCTGTaGCTATGCTCAGCTGGCATTTTAGGGAGTTCTCAACAGATGATA +
Preference number: 5 (lower is better)
Translates to: CCISCVTLVQTPKLL*LCSAGILGSSQQMI
Trigger: TATCATCTGTTGAGAACTCCCTAAAATGCCAGCTGAGCATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCACACAACTGATACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGCTCTTTGCAAACCTCTaGCTGGGTACTCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLLFANL*LGTLEK
Trigger: CTTCTCAAGAGTACCCAGCAAGAGGTTTGCAAAGAG...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCGGAGATTGCACGATCTaGTCTGAGATCCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: FSLINTCPRDLQKWENQAGDCTI*SEILEN
Trigger: ATTTTCCAGGATCTCAGACAAGATCGTGCAATCTCC...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS-3UTR CAA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCCTACTGTTGTATCAGTaGTGTGACCTTGGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: FSLINTCPRDLQKWENQALLLYQ*CDLGPN
Trigger: GTTTGGACCAAGGTCACACAACTGATACAACAGTAG...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTTAGACTTCGTCATTTaGTCCTCCTCCTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLLDFVI*SSSFWR
Trigger: TCTCCAGAAGGAGGAGGACAAAATGACGAAGTCTAA...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTAGTTATCTCTCTGGGTaGCCATCTTCATCATCCACA +
Preference number: 5 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTSYLSG*PSSSST
Trigger: TGTGGATGATGAAGATGGCAACCCAGAGAGATAACT...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCAGTTATCTCTCTGGGTaGCCATCTTCATCATCCACA +
Preference number: 5 (lower is better)
Translates to: FSLINTCPRDLQKWENQASYLSG*PSSSST
Trigger: TGTGGATGATGAAGATGGCAACCCAGAGAGATAACT...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTCTCTCTTGTAATCTGTaGCCAGATCTGGGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLLSCNL*PDLGAE
Trigger: TTCTGCTCCCAGATCTGGCAACAGATTACAAGAGAG...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGTTTGATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCGTGGACTCTGTGAACTaGAAGATGGGAACTCTGATT +
Preference number: 5 (lower is better)
Translates to: FSLINTCPRDLQKWENQAVDSVN*KMGTLI
Trigger: AATCAGAGTTCCCATCTTCAAGTTCACAGAGTCCAC...GGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTAGCCCTTTGGTTAATTaGAAGATGAGAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTSPLVN*KMRAPA
Trigger: AGCTGGAGCTCTCATCTTCAAATTAACCAAAGGGCT...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGAGCCCTTTGGTTAATTaGAAGATGAGAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLSPLVN*KMRAPA
Trigger: AGCTGGAGCTCTCATCTTCAAATTAACCAAAGGGCT...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTCTACTGTTGTATCAGTaGTGTGACCTTGGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLLLLYQ*CDLGPN
Trigger: GTTTGGACCAAGGTCACACAACTGATACAACAGTAG...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTAGTTATCTCTCTGGGTaGCCATCTTCATCATCCACA +
Preference number: 5 (lower is better)
Translates to: YLSTSDLLQIRLILPDPLSYLSG*PSSSST
Trigger: TGTGGATGATGAAGATGGCAACCCAGAGAGATAACT...AAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTCCTGCATGAGCCCTTaGGTTAATTTGAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLSCMSP*VNLKMR
Trigger: TCTCATCTTCAAATTAACCAAAGGGCTCATGCAGGA...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGTATATCCTCCAAGCCTaGCAGAATTCTTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLYILQA*QNSSEY
Trigger: GTACTCAGAAGAATTCTGCAAGGCTTGGAGGATATA...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCTTAGACTTCGTCATTTaGTCCTCCTCCTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FSISILVLLIYSRSDSSFLDFVI*SSSFWR
Trigger: TCTCCAGAAGGAGGAGGACAAAATGACGAAGTCTAA...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTATCTCTTTTAGATTCTaGGCTCCTGAGGAGTTATCT +
Preference number: 5 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTISFRF*APEELS
Trigger: AGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGAT...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTCTCTTGTAATCTGTaGCCAGATCTGGGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLILSCNL*PDLGAE
Trigger: TTCTGCTCCCAGATCTGGCAACAGATTACAAGAGAG...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp ATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCTGATCCTCTTGCAGTTTGATAAACACTaGTCCACGAGATCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: ILVLLIYSRSDSSFLILLQFDKH*STRSAK
Trigger: TTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTG...CAAGAGGATCAGGAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp GATAAACACTTGTCCACGAGATCTGCAAAAATGGGAAAATCAGGCCATATGACTCAGTTTGATAAACACTaGTCCACGAGATCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: DKHLSTRSAKMGKSGHMTQFDKH*STRSAK
Trigger: TTTTGCAGATCTCGTGGACAAGTGTTTATCAAACTG...AGTCATATGGCCTGATTTTCCCATTTTTGCAGATCTCGTGGACAAGTGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATTAGACTTCGTCATTTaGTCCTCCTCCTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSGTEFSISILVLLIYSRLDFVI*SSSFWR
Trigger: TCTCCAGAAGGAGGAGGACAAAATGACGAAGTCTAA...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCAGCCCTTTGGTTAATTaGAAGATGAGAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLISPLVN*KMRAPA
Trigger: AGCTGGAGCTCTCATCTTCAAATTAACCAAAGGGCT...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp AGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCAAAGGCAGAGTAGATTaGGCAGTCAACAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RIQHFYLSTSDLLQIRLIKGRVD*AVNKVP
Trigger: AGGGACTTTGTTGACTGCCAAATCTACTCTGCCTTT...GATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCATCTCTTTTAGATTCTaGGCTCCTGAGGAGTTATCT +
Preference number: 5 (lower is better)
Translates to: FSISILVLLIYSRSDSSFISFRF*APEELS
Trigger: AGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGAT...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS-3UTR CAA 90 bp TCTAGTGGAACAGAATTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCCTGCATGAGCCCTTaGGTTAATTTGAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: SSGTEFSISILVLLIYSRSCMSP*VNLKMR
Trigger: TCTCATCTTCAAATTAACCAAAGGGCTCATGCAGGA...TCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAATTCTGTTCCACTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS-3UTR CAA 90 bp TTCAGCATTTCTATCTTAGTACTTCTGATTTACTCCAGATCAGACTCATCCTTCCATTTGTGTATGATTTaGCTCTACTGTGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: FSISILVLLIYSRSDSSFHLCMI*LYCGLS
Trigger: AGAGAGTCCACAGTAGAGCAAAATCATACACAAATG...GAAGGATGAGTCTGATCTGGAGTAAATCAGAAGTACTAAGATAGAAATGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000589703.5
ENST00000615985.4
CDS TCA 72 bp CGGGGTCCCAGGACTCACTCACTTCCACGAGAGGAATaGAGGCCGCGCTCTCAACCTCTTGCCGCGGAAGTG +
Preference number: 6 (lower is better)
Translates to: RGPRTHSLPREE*RPRSQPLAAEV
Trigger: CACTTCCGCGGCAAGAGGTTGAGAGCGCGGCCTTCATTCCTCTCGTGGAAGTGAGTGAGTCCTGGGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS GCA 72 bp CAATCAGCTGCCCAGCCATTCAACTCCGCCCTCCGCTaGTCGCCGCAGCGTCTTTTCCTGCTGACCGAAGTG +
Preference number: 6 (lower is better)
Translates to: QSAAQPFNSALR*SPQRLFLLTEV
Trigger: CACTTCGGTCAGCAGGAAAAGACGCTGCGGCGAGCAGCGGAGGGCGGAGTTGAATGGCTGGGCAGCTGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS TCA 72 bp CTGAAGTCTTCTCGCACTCGGAACAGAAGAGGAAGGTaGATGCTAGGTCCTGTCACAGTGGGGCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LKSSRTRNRRGR*MLGPVTVGLCC
Trigger: GCAGCAGAGCCCCACTGTGACAGGACCTAGCATTCACCTTCCTCTTCTGTTCCGAGTGCGAGAAGACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000588432.1
ENST00000590655.1
CDS CCA 72 bp GTCTGCAGCTTCACATGGCTTGATGATGGGGAAACATaGGCTGGATTCCAGATTCCACTTGACCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: VCSFTWLDDGET*AGFQIPLDPSA
Trigger: TGCTGAAGGGTCAAGTGGAATCTGGAATCCAGCCCATGTTTCCCCATCATCAAGCCATGTGAAGCTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS CCA 72 bp CTTGTCTCTCTGTTGCTTGGAGTCTGCAGCTTCACATaGCTTGATGATGGGGAAACATGGGCTGGATTCCAG +
Preference number: 6 (lower is better)
Translates to: LVSLLLGVCSFT*LDDGETWAGFQ
Trigger: CTGGAATCCAGCCCATGTTTCCCCATCATCAAGCCATGTGAAGCTGCAGACTCCAAGCAACAGAGAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS TCA 72 bp ACCAGCCTAGCCAAGATGGTGAAACCCCGTCTTCACTaGATAACTCCTCTTTGCAAACCTCTTGCTGGGTAC +
Preference number: 6 (lower is better)
Translates to: TSLAKMVKPRLH*ITPLCKPLAGY
Trigger: GTACCCAGCAAGAGGTTTGCAAAGAGGAGTTATTCAGTGAAGACGGGGTTTCACCATCTTGGCTAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588432.1
CDS CAA 72 bp TCTCTCTGTTGCTTGGAGTCTGCAGCTTCACATGGCTaGATGATGGGGAAACATGGGCTGGATTCCAGATTC +
Preference number: 6 (lower is better)
Translates to: SLCCLESAASHG*MMGKHGLDSRF
Trigger: GAATCTGGAATCCAGCCCATGTTTCCCCATCATCAAGCCATGTGAAGCTGCAGACTCCAAGCAACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS GCA 72 bp TTCCAGATTCCACTTGACCCTTCAGCAGAGAGCCTCTaGACAGTGAAAAATGGAGTTCTTGTAGCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: FQIPLDPSAESL*TVKNGVLVALR
Trigger: CCTGAGAGCTACAAGAACTCCATTTTTCACTGTGCAGAGGCTCTCTGCTGAAGGGTCAAGTGGAATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS CCA 72 bp GCCTCCTTAGACTTCGTCATTTTGTCCTCCTCCTTCTaGAGAAGTGCCAAGTCTGTGAAGAAGCTACTGTTG +
Preference number: 6 (lower is better)
Translates to: ASLDFVILSSSF*RSAKSVKKLLL
Trigger: CAACAGTAGCTTCTTCACAGACTTGGCACTTCTCCAGAAGGAGGAGGACAAAATGACGAAGTCTAAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS GCA 72 bp GTGACCTTGGTCCAAACACCTAAACTTCTGTGCCTATaGTCAGCTGGCATTTTAGGGAGTTCTCAACAGATG +
Preference number: 6 (lower is better)
Translates to: VTLVQTPKLLCL*SAGILGSSQQM
Trigger: CATCTGTTGAGAACTCCCTAAAATGCCAGCTGAGCATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS CAA 90 bp TCCAGCTTTCATACCAGAGCCAGTATTCTAAATCTTGTCTCTCTGTaGCTTGGAGTCTGCAGCTTCACATGGCTTGATGATGGGGAAACA +
Preference number: 6 (lower is better)
Translates to: SSFHTRASILNLVSL*LGVCSFTWLDDGET
Trigger: TGTTTCCCCATCATCAAGCCATGTGAAGCTGCAGACTCCAAGCAACAGAGAGACAAGATTTAGAATACTGGCTCTGGTATGAAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS GCA 72 bp AGTTGTGTGACCTTGGTCCAAACACCTAAACTTCTGTaGCTATGCTCAGCTGGCATTTTAGGGAGTTCTCAA +
Preference number: 6 (lower is better)
Translates to: SCVTLVQTPKLL*LCSAGILGSSQ
Trigger: TTGAGAACTCCCTAAAATGCCAGCTGAGCATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCACACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS CAA 72 bp CATACCAGAGCCAGTATTCTAAATCTTGTCTCTCTGTaGCTTGGAGTCTGCAGCTTCACATGGCTTGATGAT +
Preference number: 6 (lower is better)
Translates to: HTRASILNLVSL*LGVCSFTWLDD
Trigger: ATCATCAAGCCATGTGAAGCTGCAGACTCCAAGCAACAGAGAGACAAGATTTAGAATACTGGCTCTGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269973.10
CDS TCA 72 bp CAAGTCTGTGAAGAAGCTACTGTTGTATCAGTTGTGTaGCCTTGGTCCAAACACCTAAACTTCTGTGCCTAT +
Preference number: 6 (lower is better)
Translates to: QVCEEATVVSVV*PWSKHLNFCAY
Trigger: ATAGGCACAGAAGTTTAGGTGTTTGGACCAAGGTCACACAACTGATACAACAGTAGCTTCTTCACAGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269973.10
ENST00000615985.4
CDS TCA 72 bp AGCACCCAAAATCCAGATGCCTGTTGGAGAGCTACATaGATCACTTACTCACTGAATAACTCCTCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: STQNPDACWRAT*ITYSLNNSSLQ
Trigger: TTGCAAAGAGGAGTTATTCAGTGAGTAAGTGATTCATGTAGCTCTCCAACAGGCATCTGGATTTTGGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590655.1
CDS TCA 72 bp ATAACTCCTCTTTGCAAACCTCTTGCTGGGTACTCTTaGGAAGAATATGATAATGTCCATGAAACAGAGGTC +
Preference number: 6 (lower is better)
Translates to: ITPLCKPLAGYS*EEYDNVHETEV
Trigger: GACCTCTGTTTCATGGACATTATCATATTCTTCTCAAGAGTACCCAGCAAGAGGTTTGCAAAGAGGAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269973.10
ENST00000588432.1
ENST00000590655.1
CDS TCA 72 bp GGACTCTGTGAACTTGAAGATGGGAACTCTGATTACTaGATCCCTCATCTTTATAGTGCAAATCATCTCGTT +
Preference number: 6 (lower is better)
Translates to: GLCELEDGNSDY*IPHLYSANHLV
Trigger: AACGAGATGATTTGCACTATAAAGATGAGGGATTCAGTAATCAGAGTTCCCATCTTCAAGTTCACAGAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269973.10
ENST00000588140.1
ENST00000589703.5
ENST00000615985.4