Pregenerated sensors for ZNF442 (Homo sapiens)
Ensembl gene IDs: ENSG00000198342Ensembl transcript IDs: ENST00000242804.9, ENST00000438182.5, ENST00000462995.1
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGAGAAGAAACCCATGTTTTCCTCCTACTACTTCATTGGGTGTTaGAAACCATTATGGAGTGAGGAAGTCAATGATTTCAGGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QEKKPMFSSYYFIGC*KPLWSEEVNDFRSF Trigger: GAAGCTCCTGAAATCATTGACTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACATGGGTTTCTTCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 90 bp | CCCATGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATaGAGTGAGGAAGTCAATGATTTCAGGAGCTTCTCCACTATTGAT | + |
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Preference number: 1 (lower is better) Translates to: PMFSSYYFIGCWKPL*SEEVNDFRSFSTID Trigger: ATCAATAGTGGAGAAGCTCCTGAAATCATTGACTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR TCA 90 bp | AAATCTACAGTCAACCCTTTTTCCTTGTCTTATTCAAATTCTCAGTaGCCTGTGACACAGCTGACCACTCTCCCCATATTGAAATACCTT | + |
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Preference number: 1 (lower is better) Translates to: KSTVNPFSLSYSNSQ*PVTQLTTLPILKYL Trigger: AAGGTATTTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAAGACAAGGAAAAAGGGTTGACTGTAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 90 bp | CTATTGATGAAGTATCAGGAATATCTCAAATGCTGCAAGGGAGGTTaGTGGGGAAAACAATCTATGACATGCTTGAAGACTTTATTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LLMKYQEYLKCCKGG*WGKQSMTCLKTLLR Trigger: CCTCAATAAAGTCTTCAAGCATGTCATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCATTTGAGATATTCCTGATACTTCATCAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAGGCAGGAGAATCGCTTaGATCTGGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QLTTLPILKYLLLEASRRGRRIA*IWEVEV Trigger: AACCTCCACCTCCCAGATTCAAGCGATTCTCCTGCC...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAAACTGTCTCAACTGTTaGGCCACCTTCTCATCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QLTTLPILKYLLLEASRRNCLNC*ATFSSL Trigger: GAGAGATGAGAAGGTGGCTCAACAGTTGAGACAGTT...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCGACAGGAGAATTGCTTaGACCCGGGAGGCAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: HIHSSLIDSSQIITVETTDRRIA*TREAED Trigger: ATCCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGTC...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAAAAATTAGCTGGGTGTaGTGGCATGCATCTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: QLTTLPILKYLLLEASRRKISWV*WHASVI Trigger: GATTACAGATGCATGCCACCACACCCAGCTAATTTT...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGAAATAAGCCAGACATGGAAGGACACATGCATACTTCCACATATCTCTCTCATGTGCAGCAGTTTTTaGGGCATCTACAGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SEISQTWKDTCILPHISLMCSSF*GIYSLC Trigger: GCAGAGGCTGTAGATGCCCCAAAAACTGCTGCACAT...GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CAA 90 bp | GGAGGTTGGTGGGGAAAACAATCTATGACATGCTTGAAGACTTTATaGAGGAACACATTGACAGGACAAGAGCACCGCCATCTTTATAAC | + |
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Preference number: 2 (lower is better) Translates to: GGWWGKQSMTCLKTL*RNTLTGQEHRHLYN Trigger: GTTATAAAGATGGCGGTGCTCTTGTCCTGTCAATGTGTTCCTCAATAAAGTCTTCAAGCATGTCATAGATTGTTTTCCCCACCAACCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGCTAAGACAGGAGAATTaGTTGAACCCGGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKLRQEN*LNPGGR Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCTGTCTTAG...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGTCCAAACTCAGCATCTaGAATCAGAACCTGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKSKLSI*NQNLVH Trigger: ATGAACCAGGTTCTGATTGCAGATGCTGAGTTTGGA...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR GCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACCAGGAATATCTCAAATaGTGCAAGGGAGGTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ITLLGIHISKRIESRDSHQEYLK*CKGGWW Trigger: CCACCAACCTCCCTTGCAGCATTTGAGATATTCCTG...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAACAAAGATGTGACACTTaGAACATGTGCAGCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LFKFSVTCDTADHSPHIEQRCDT*NMCSSF Trigger: AAAACTGCTGCACATGTTTCAAGTGTCACATCTTTG...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGACCCAAGGGATAACATaGCAACAAACACTGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RRGNIKDVTLETCAAVFGTQGIT*QQTLQG Trigger: TCCTTGCAGTGTTTGTTGGCATGTTATCCCTTGGGT...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCCCAATCCCCTGCATATaGTTAGGGGATAACCATATT | + |
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Preference number: 2 (lower is better) Translates to: HIHSSLIDSSQIITVETTPIPCI*LGDNHI Trigger: AATATGGTTATCCCCTAACCATATGCAGGGGATTGG...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAACATCATCATCATCCTTaGGTTATCAAGCAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFKFSVTCDTADHSPHIEHHHHP*VIKQEG Trigger: TCCTTCTTGCTTGATAACCCAAGGATGATGATGATG...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAACAGCCTCTGCAAGGTaGAAAGTATTAAAGATTACA | + |
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Preference number: 2 (lower is better) Translates to: LFKFSVTCDTADHSPHIETASAR*KVLKIT Trigger: TGTAATCTTTAATACTTTTCACCTTGCAGAGGCTGT...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGGTAATATCAAAGATGTaGCACTTGAAACATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKVISKM*HLKHVQ Trigger: CTGCACATGTTTCAAGTGTCACATCTTTGATATTAC...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGAGTAAGATCCTTCAATaGAACAAAACCTCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKSKILQ*NKTSVS Trigger: TGACACAGAGGTTTTGTTCCATTGAAGGATCTTACT...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGTGCAAGGGAGGTTGGTaGGGAAAACAATCTATGACA | + |
|
Preference number: 2 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKCKGGW*GKQSMT Trigger: TGTCATAGATTGTTTTCCCCACCAACCTCCCTTGCA...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGTGTTGGAAACCATTATaGAGTGAGGAAGTCAATGAT | + |
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Preference number: 2 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKCWKPL*SEEVND Trigger: ATCATTGACTTCCTCACTCCATAATGGTTTCCAACA...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACGCTAAGACAGGAGAATaGCTTGAACCCGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ITLLGIHISKRIESRDSHAKTGE*LEPGRQ Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTGTCTTAGC...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGTTATTGAGGAACACATaGACAGGACAAGAGCACCGC | + |
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Preference number: 3 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKLLRNT*TGQEHR Trigger: GCGGTGCTCTTGTCCTGTCAATGTGTTCCTCAATAA...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAATGCTGCAAGGGAGGTaGGTGGGGAAAACAATCTAT | + |
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Preference number: 3 (lower is better) Translates to: LFKFSVTCDTADHSPHIEMLQGR*VGKTIY Trigger: ATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCAT...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR TCA 72 bp | GTCAACCCTTTTTCCTTGTCTTATTCAAATTCTCAGTaGCCTGTGACACAGCTGACCACTCTCCCCATATTG | + |
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Preference number: 3 (lower is better) Translates to: VNPFSLSYSNSQ*PVTQLTTLPIL Trigger: CAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAAGACAAGGAAAAAGGGTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 72 bp | TCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATaGAGTGAGGAAGTCAATGATTTCAGGAGCTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SSYYFIGCWKPL*SEEVNDFRSFS Trigger: GGAGAAGCTCCTGAAATCATTGACTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCACCACTCTCCCCATATaGAAATACCTTCTTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: HIHSSLIDSSQIITVETTTTLPI*KYLLLE Trigger: CTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGT...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR GCA 72 bp | CCACTATTGATGAAGTATCAGGAATATCTCAAATGCTaGAAGGGAGGTTGGTGGGGAAAACAATCTATGACA | + |
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Preference number: 3 (lower is better) Translates to: PLLMKYQEYLKC*KGGWWGKQSMT Trigger: TGTCATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCATTTGAGATATTCCTGATACTTCATCAATAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR GCA 72 bp | TCTCCACTATTGATGAAGTATCAGGAATATCTCAAATaGTGCAAGGGAGGTTGGTGGGGAAAACAATCTATG | + |
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Preference number: 3 (lower is better) Translates to: SPLLMKYQEYLK*CKGGWWGKQSM Trigger: CATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCATTTGAGATATTCCTGATACTTCATCAATAGTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCCCAGTGACCAAATACTaGCCAAAATCTACAGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: HIHSSLIDSSQIITVETTPVTKY*PKSTVN Trigger: GTTGACTGTAGATTTTGGCAAGTATTTGGTCACTGG...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 72 bp | TATCAGGAATATCTCAAATGCTGCAAGGGAGGTTGGTaGGGAAAACAATCTATGACATGCTTGAAGACTTTA | + |
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Preference number: 3 (lower is better) Translates to: YQEYLKCCKGGW*GKQSMTCLKTL Trigger: TAAAGTCTTCAAGCATGTCATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCATTTGAGATATTCCTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 72 bp | AAACCCATGTTTTCCTCCTACTACTTCATTGGGTGTTaGAAACCATTATGGAGTGAGGAAGTCAATGATTTC | + |
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Preference number: 3 (lower is better) Translates to: KPMFSSYYFIGC*KPLWSEEVNDF Trigger: GAAATCATTGACTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACATGGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR CCA 72 bp | AACCTTGAAAACGTTCTAAGTGAAATAAGCCAGACATaGAAGGACACATGCATACTTCCACATATCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: NLENVLSEISQT*KDTCILPHISL Trigger: GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACTTAGAACGTTTTCAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACTGCTTGAAGACTTTATaGAGGAACACATTGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: ITLLGIHISKRIESRDSHCLKTL*RNTLTG Trigger: TCCTGTCAATGTGTTCCTCAATAAAGTCTTCAAGCA...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR-3UTR CAA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGTTCCAGTGGTTAATGTaGGTAGTTCAAAGGGTAACA | + |
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Preference number: 3 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKFQWLM*VVQRVT Trigger: TGTTACCCTTTGAACTACCAACATTAACCACTGGAA...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| 3UTR TCA 72 bp | ACCATACAGTGGAAATTTATTCAGACACAAAAACAATaGGTTCCTGATACATGCTACCACATGGATAAACCT | + |
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Preference number: 3 (lower is better) Translates to: TIQWKFIQTQKQ*VPDTCYHMDKP Trigger: AGGTTTATCCATGTGGTAGCATGTATCAGGAACTCATTGTTTTTGTGTCTGAATAAATTTCCACTGTATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR TCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACGACAGTGCCTGCCACTaGCCTGCCAGGGCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHDSACH*PARASL Trigger: GAGAGAAGCCCTGGCAGGTCAGTGGCAGGCACTGTC...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR TCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGGGCAGGCAGATCATCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKGRQII*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGATGATCTGCCTGCC...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR GCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAATGCCTGCCACTGACCTaGCAGGGCTTCTCTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: LFKFSVTCDTADHSPHIECLPLT*QGFSQL Trigger: TAGCTGAGAGAAGCCCTGGCAGGTCAGTGGCAGGCA...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAATAAGCCAGACATGGAAGGACACATGCATACTTCCACATATCTCTCTCTCATGGAGGCGGAACTaGGGTCTTCTCTCCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SEISQTWKDTCILPHISLSWRRN*GLLSSP Trigger: GGGAGAGGAGAGAAGACCCCAGTTCCGCCTCCATGA...GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAATAAGCCAGACATGGAAGGACACATGCATACTTCCACATATCTCTCTCCCGGCTTCTGCATTGTaGCTGGGGATAAGATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SEISQTWKDTCILPHISLPASAL*LGIRSR Trigger: CCGAGATCTTATCCCCAGGCACAATGCAGAAGCCGG...GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR GCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCCTGACCGCCGGCTTCTaGATTGTGCCTGGGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: HIHSSLIDSSQIITVETTLTAGF*IVPGDK Trigger: CTTATCCCCAGGCACAATGCAGAAGCCGGCGGTCAG...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR GCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAACCCAAGGGATAACATaGCAACAAACACTGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QLTTLPILKYLLLEASRRTQGIT*QQTLQG Trigger: TCCTTGCAGTGTTTGTTGGCATGTTATCCCTTGGGT...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAATTCTGCTGCAGGCCTTaGAGTCTCGGTGCAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: LFKFSVTCDTADHSPHIEFCCRP*SLGAVT Trigger: AGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAA...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR GCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGCCCAAGGTTCCCCGCTaGCAGCATAGGACTCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKPKVPR*QHRTQR Trigger: ACGCTGAGTCCTATGCTGGCAGCGGGGAACCTTGGG...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CCA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACTGTGTCCCCAAGGAATaGAAACCTGAGCCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNCVPKE*KPEPHC Trigger: GCAGTGGGGCTCAGGTTTCCATTCCTTGGGGACACA...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGACCAATCCCCTGCATATaGTTAGGGGATAACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: QLTTLPILKYLLLEASRRPIPCI*LGDNHI Trigger: AATATGGTTATCCCCTAACCATATGCAGGGGATTGG...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGACAAAGATGTGACACTTaGAACATGTGCAGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLTTLPILKYLLLEASRRQRCDT*NMCSSF Trigger: AAAACTGCTGCACATGTTTCAAGTGTCACATCTTTG...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCCACTCAGCAGGAGAATaGGGTTTCTTCACCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HIHSSLIDSSQIITVETTHSAGE*GFFTSR Trigger: ACGGGAGGTGAAGAAACCGCATTCTCCTGCTGAGTG...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGGGCAGGAGAATCGCTTaGATCTGGGAGGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKGRRIA*IWEVEV Trigger: AACCTCCACCTCCCAGATTCAAGCGATTCTCCTGCC...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAGTAATATCAAAGATGTaGCACTTGAAACATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLTTLPILKYLLLEASRRVISKM*HLKHVQ Trigger: CTGCACATGTTTCAAGTGTCACATCTTTGATATTAC...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGAACTGTCTCAACTGTTaGGCCACCTTCTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKNCLNC*ATFSSL Trigger: GAGAGATGAGAAGGTGGCTCAACAGTTGAGACAGTT...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGTTAAACTGTTTCTGCTaGAGGCCTTGGAGTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKLNCFC*RPWSLG Trigger: ACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAA...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAAGTAAGATCCTTCAATaGAACAAAACCTCTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTTLPILKYLLLEASRRSKILQ*NKTSVS Trigger: TGACACAGAGGTTTTGTTCCATTGAAGGATCTTACT...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACCCACTCTCCCCATATTaGAATACCTTCTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNPLSPY*NTFFWR Trigger: CCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGG...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACATGTGCAGCAGTTTTTaGGGCATCTACAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHMCSSF*GIYSLC Trigger: GCAGAGGCTGTAGATGCCCCAAAAACTGCTGCACAT...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| 3UTR CAA 72 bp | TGGGGAAAACAATCTATGACATGCTTGAAGACTTTATaGAGGAACACATTGACAGGACAAGAGCACCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGKQSMTCLKTL*RNTLTGQEHRH Trigger: ATGGCGGTGCTCTTGTCCTGTCAATGTGTTCCTCAATAAAGTCTTCAAGCATGTCATAGATTGTTTTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| 3UTR CAA 72 bp | AGGAGAAGAAACCCATGTTTTCCTCCTACTACTTCATaGGGTGTTGGAAACCATTATGGAGTGAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRNPCFPPTTS*GVGNHYGVRKS Trigger: TGACTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACATGGGTTTCTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAATTCTTTCTCAGATCTTaGATTCCAACGGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFKFSVTCDTADHSPHIEFFLRS*IPTERL Trigger: CAGCCTTTCCGTTGGAATTCAAGATCTGAGAAAGAA...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGCAGGAATATCTCAAATaGTGCAAGGGAGGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGQEYLK*CKGGWW Trigger: CCACCAACCTCCCTTGCAGCATTTGAGATATTCCTG...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACTGCTGCAAGGGAGGTTaGTGGGGAAAACAATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHCCKGG*WGKQSM Trigger: CATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCA...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| 3UTR CAA 72 bp | AAGGGAGGTTGGTGGGGAAAACAATCTATGACATGCTaGAAGACTTTATTGAGGAACACATTGACAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGWWGKQSMTC*KTLLRNTLTGQ Trigger: TTGTCCTGTCAATGTGTTCCTCAATAAAGTCTTCAAGCATGTCATAGATTGTTTTCCCCACCAACCTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| 3UTR CAA 72 bp | CACAGACATAGACATACCACATCCACAGCAGCCTTATaGATAGCAGTCAAATTATTACTGTGGAAACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: HRHRHTTSTAAL*IAVKLLLWKQP Trigger: GGGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTGGTATGTCTATGTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAACACCAATTATTCTGTaGACCAGCAATTACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKFSVTCDTADHSPHIETPIIL*TSNYTP Trigger: AGGAGTGTAATTGCTGGTTCACAGAATAATTGGTGT...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGCTATTAAACTGTTTCTaGTGCAGGCCTTGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGLLNCF*CRPWSL Trigger: GAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAG...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCACAGTACTATCTGGCTaGCGACTTTCACTAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIHSSLIDSSQIITVETTTVLSG*RLSLNL Trigger: GAGATTTAGTGAAAGTCGCCAGCCAGATAGTACTGT...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACTGCAAGGGAGGTTGGTaGGGAAAACAATCTATGACA | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHCKGGW*GKQSMT Trigger: TGTCATAGATTGTTTTCCCCACCAACCTCCCTTGCA...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAAATAAGCCAGACATGGAAGGACACATGCATACTTCCACATATCTCTCTCATAGCAATTAAGGAATaGACAACCCATGATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEISQTWKDTCILPHISLIAIKE*TTHDFS Trigger: GGAGAAATCATGGGTTGTTCATTCCTTAATTGCTAT...GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGAGGAGTGGTGATAATTaGAGGCTGTCCCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKRSGDN*RLSHIV Trigger: AACAATGTGGGACAGCCTTCAATTATCACCACTCCT...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGTATTCAAATTCTCAGTaGCCTGTGACACAGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKYSNSQ*PVTQLT Trigger: GGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATA...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACTATATCCAAAAGAATTaGAAGCAGGGACTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNYIQKN*KQGLTQ Trigger: CTGTGTGAGTCCCTGCTTTCAATTCTTTTGGATATA...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACGGCATCTACAGCCTCTaGAAGGTGAAAAGTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNGIYSL*KVKSIK Trigger: TTTAATACTTTTCACCTTGCAGAGGCTGTAGATGCC...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCATTCACAGTACTATCTaGCTGGCGACTTTCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIHSSLIDSSQIITVETTIHSTI*LATFTK Trigger: TTTAGTGAAAGTCGCCAGCCAGATAGTACTGTGAAT...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACACAGCCTCTGCAAGGTaGAAAGTATTAAAGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNTASAR*KVLKIT Trigger: TGTAATCTTTAATACTTTTCACCTTGCAGAGGCTGT...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGAAAATTAGCTGGGTGTaGTGGCATGCATCTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKKISWV*WHASVI Trigger: GATTACAGATGCATGCCACCACACCCAGCTAATTTT...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACCATCATCATCATCCTTaGGTTATCAAGCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHHHHHP*VIKQEG Trigger: TCCTTCTTGCTTGATAACCCAAGGATGATGATGATG...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACTACTTCATTGGGTGTTaGAAACCATTATGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHYFIGC*KPLWSE Trigger: CTCACTCCATAATGGTTTCCAACACCCAATGAAGTA...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACCTCCTACTACTTCATTaGGTGTTGGAAACCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHLLLLH*VLETIM Trigger: CATAATGGTTTCCAACACCCAATGAAGTAGTAGGAG...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGGATGAGCAGTTCCAGTaGTTAATGTTGGTAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGDEQFQ*LMLVVQ Trigger: TTGAACTACCAACATTAACCACTGGAACTGCTCATC...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAATACATGCTACCACATaGATAAACCTTGAAAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFKFSVTCDTADHSPHIEIHATT*INLENV Trigger: AACGTTTTCAAGGTTTATCCATGTGGTAGCATGTAT...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACATCCTCAAAGGCTACTaGATCATATTGTTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHILKGY*IILFSL Trigger: GAGAGAAAACAATATGATTCAGTAGCCTTTGAGGAT...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGTCGTGGAGGTCTATTTaGGATATATTTCACTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGSWRSI*DIFHYK Trigger: CTTGTAGTGAAATATATCTCAAATAGACCTCCACGA...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACGAAACCCTTATGCATTaGTGGAGAGAATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ITLLGIHISKRIESRDSHETLMH*WRECKT Trigger: TGTTTTACATTCTCTCCAGCAATGCATAAGGGTTTC...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGTGTTGGAAACCATTATaGAGTGAGGAAGTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGCWKPL*SEEVND Trigger: ATCATTGACTTCCTCACTCCATAATGGTTTCCAACA...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGGAAATTAAAAACTTTTaGGCACCAAAGGACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGNIKDVTLETCAAVFGEIKNF*APKDNL Trigger: GAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTC...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGACAGAGAAAGTAGAATaGAGATTTTCAGTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKTEKVE*RFSVLW Trigger: CCAAAGTACTGAAAATCTCCATTCTACTTTCTCTGT...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS GCA 90 bp | GGCGGAACTGGGGTCTTCTCTCCTCTCCCCCTATTAAACTGTTTCTaGTGCAGGCCTTGGAGTCTCGGTGCAGTGACTCGGACCGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGTGVFSPLPLLNCF*CRPWSLGAVTRTAN Trigger: GTTCGCGGTCCGAGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAGGGGGAGAGGAGAGAAGACCCCAGTTCCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS GCA 90 bp | GGAACTGGGGTCTTCTCTCCTCTCCCCCTATTAAACTGTTTCTGCTaGAGGCCTTGGAGTCTCGGTGCAGTGACTCGGACCGCGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGVFSPLPLLNCFC*RPWSLGAVTRTANL Trigger: CAGGTTCGCGGTCCGAGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAGGGGGAGAGGAGAGAAGACCCCAGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS GCA 90 bp | GCCTTCCTGAGAGTCAGGTCACAGAAGACACTGACCGCCGGCTTCTaGATTGTGCCTGGGGATAAGATCTCGGAGAGCTGCTCGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AFLRVRSQKTLTAGF*IVPGDKISESCSSC Trigger: GCAACTCGAGCAGCTCTCCGAGATCTTATCCCCAGGCACAATGCAGAAGCCGGCGGTCAGTGTCTTCTGTGACCTGACTCTCAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS CCA 90 bp | GTCTTCTCTCCTCTCCCCCTATTAAACTGTTTCTGCTGCAGGCCTTaGAGTCTCGGTGCAGTGACTCGGACCGCGAACCTGTGCCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSPLPLLNCFCCRP*SLGAVTRTANLCRL Trigger: TAACCGGCACAGGTTCGCGGTCCGAGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAGGGGGAGAGGAGAGAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAGGCTGTAAGAGAAGTTaGCACCTGACCCTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFKFSVTCDTADHSPHIEGCKRS*HLTLPL Trigger: CAGCGGCAGGGTCAGGTGCAAACTTCTCTTACAGCC...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTGACCACTCTCCCCATATTGAAATACCTTCTTCTGGAGGCTTCCAGGAGAATGCTGCAAGGGAGGTaGGTGGGGAAAACAATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QLTTLPILKYLLLEASRRMLQGR*VGKTIY Trigger: ATAGATTGTTTTCCCCACCAACCTCCCTTGCAGCAT...TCTCCTGGAAGCCTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGTCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242804.9 |
||
| CDS-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAAGCTAAGACAGGAGAATaGCTTGAACCCGGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKFSVTCDTADHSPHIEAKTGE*LEPGRQ Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTGTCTTAGC...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | TGTTTTCCTCCTACTACTTCATTGGGTGTTGGAAACCATTATGGAGTGAGGAAGGGAGAGCTGCTCGAGTaGCCCAAGTTCTTTCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: CFPPTTSLGVGNHYGVRKGELLE*PKFFLR Trigger: TCTGAGAAAGAACTTGGGCAACTCGAGCAGCTCTCC...CTTCCTCACTCCATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACCCGCCGGCTTCTGCATaGTGCCTGGGGATAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: ITLLGIHISKRIESRDSHPPASA*CLGIRS Trigger: AGATCTTATCCCCAGGCACAATGCAGAAGCCGGCGG...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAATTATTGAGGAACACATaGACAGGACAAGAGCACCGC | + |
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Preference number: 5 (lower is better) Translates to: LFKFSVTCDTADHSPHIELLRNT*TGQEHR Trigger: GCGGTGCTCTTGTCCTGTCAATGTGTTCCTCAATAA...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGCATGTGCAGCAGTTTTaGGGGCATCTACAGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKHVQQF*GHLQPL Trigger: CAGAGGCTGTAGATGCCCCAAAAACTGCTGCACATG...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAATAAGCCAGACATGGAAGGACACATGCATACTTCCACATATCTCTCTCACCACTCTCCCCATATaGAAATACCTTCTTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SEISQTWKDTCILPHISLTTLPI*KYLLLE Trigger: CTCCAGAAGAAGGTATTTCAATATGGGGAGAGTGGT...GAGAGAGATATGTGGAAGTATGCATGTGTCCTTCCATGTCTGGCTTATTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | ATTACACTCCTAGGGATACATATATCCAAAAGAATTGAAAGCAGGGACTCACACAGGTCCACCTCCACGTaGTACTATTATGTGTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ITLLGIHISKRIESRDSHRSTST*YYYVSS Trigger: CGAAGACACATAATAGTACAACGTGGAGGTGGACCT...GTGTGAGTCCCTGCTTTCAATTCTTTTGGATATATGTATCCCTAGGAGTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAACCTCCTACTACTTCATaGGGTGTTGGAAACCATTAT | + |
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Preference number: 5 (lower is better) Translates to: LFKFSVTCDTADHSPHIEPPTTS*GVGNHY Trigger: ATAATGGTTTCCAACACCCAATGAAGTAGTAGGAGG...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | TTATTCAAATTCTCAGTGACCTGTGACACAGCTGACCACTCTCCCCATATTGAACCAGTGACCAAATACTaGCCAAAATCTACAGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: LFKFSVTCDTADHSPHIEPVTKY*PKSTVN Trigger: GTTGACTGTAGATTTTGGCAAGTATTTGGTCACTGG...TTCAATATGGGGAGAGTGGTCAGCTGTGTCACAGGTCACTGAGAATTTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGTAATATCAAAGATGTGACACTTGAAACATGTGCAGCAGTTTTTGGGGTTCTTTCTCAGATCTaGAATTCCAACGGAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: RRGNIKDVTLETCAAVFGVLSQI*NSNGKA Trigger: AGCCTTTCCGTTGGAATTCAAGATCTGAGAAAGAAC...CCCAAAAACTGCTGCACATGTTTCAAGTGTCACATCTTTGATATTACCTCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACTTCCAGTGGTTAATGTaGGTAGTTCAAAGGGTAACA | + |
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Preference number: 5 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNFQWLM*VVQRVT Trigger: TGTTACCCTTTGAACTACCAACATTAACCACTGGAA...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCGTCAACCCTTTTTCCTaGTCTTATTCAAATTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: HIHSSLIDSSQIITVETTVNPFS*SYSNSQ Trigger: CTGAGAATTTGAATAAGACAAGGAAAAAGGGTTGAC...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | CACATCCACAGCAGCCTTATTGATAGCAGTCAAATTATTACTGTGGAAACAACCATATATCCAAAAGAATaGAAAGCAGGGACTCACACA | + |
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Preference number: 5 (lower is better) Translates to: HIHSSLIDSSQIITVETTIYPKE*KAGTHT Trigger: TGTGTGAGTCCCTGCTTTCAATTCTTTTGGATATAT...GGTTGTTTCCACAGTAATAATTTGACTGCTATCAATAAGGCTGCTGTGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | GGATGCAGGAGGATGTGGATAGGTTACATGCAAATGTCCTTTTATAAAAGGAACTTTGGCAGTGATTTATaGGATACGACATTTAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GCRRMWIGYMQMSFYKRNFGSDL*DTTFKA Trigger: TGCCTTAAATGTCGTATCCAATAAATCACTGCCAAA...GTTCCTTTTATAAAAGGACATTTGCATGTAACCTATCCACATCCTCCTGCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS-3UTR CAA 90 bp | AAACTGGACTACATCGAAATTAAAAACTTTTGCGCACCAAAGGACAATCTCAAGCAATCTATGACATGCTaGAAGACTTTATTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: KLDYIEIKNFCAPKDNLKQSMTC*KTLLRN Trigger: GTTCCTCAATAAAGTCTTCAAGCATGTCATAGATTG...CTTGAGATTGTCCTTTGGTGCGCAAAAGTTTTTAATTTCGATGTAGTCCAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS GCA 72 bp | TCCGCGGTGTCCCGTGTTCTCCCCAAGGTTCCCCGCTaGCAGCATAGGACTCAGCGTGACAGTGCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SAVSRVLPKVPR*QHRTQRDSACH Trigger: GTGGCAGGCACTGTCACGCTGAGTCCTATGCTGGCAGCGGGGAACCTTGGGGAGAACACGGGACACCGCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242804.9 ENST00000438182.5 ENST00000462995.1 |
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| CDS TCA 72 bp | CTTGAATTCCAACGGAAAGGCTGGCGCCAAGCAGGGTaGAAACCCCACGAGGGAACCCACTCAGCAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEFQRKGWRQAG*KPHEGTHSAGE Trigger: TTCTCCTGCTGAGTGGGTTCCCTCGTGGGGTTTTCACCCTGCTTGGCGCCAGCCTTTCCGTTGGAATTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS GCA 72 bp | GGGGTCTTCTCTCCTCTCCCCCTATTAAACTGTTTCTaGTGCAGGCCTTGGAGTCTCGGTGCAGTGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: GVFSPLPLLNCF*CRPWSLGAVTR Trigger: CCGAGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAGGGGGAGAGGAGAGAAGACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS CAA 72 bp | TCCTCTCCCCCTATTAAACTGTTTCTGCTGCAGGCCTaGGAGTCTCGGTGCAGTGACTCGGACCGCGAACCT | + |
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Preference number: 6 (lower is better) Translates to: SSPPIKLFLLQA*ESRCSDSDREP Trigger: AGGTTCGCGGTCCGAGTCACTGCACCGAGACTCCAAGGCCTGCAGCAGAAACAGTTTAATAGGGGGAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS TCA 72 bp | GAGCTGCTCGAGTTGCCCAAGTTCTTTCTCAGATCTTaGATTCCAACGGAAAGGCTGGCGCCAAGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ELLELPKFFLRS*IPTERLAPSRV Trigger: CACCCTGCTTGGCGCCAGCCTTTCCGTTGGAATTCAAGATCTGAGAAAGAACTTGGGCAACTCGAGCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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| CDS GCA 72 bp | GTGCCTGGGGATAAGATCTCGGAGAGCTGCTCGAGTTaGCCAAGTTCTTTCTCAGATCTTGAATTCCAACGG | + |
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Preference number: 6 (lower is better) Translates to: VPGDKISESCSS*PSSFSDLEFQR Trigger: CCGTTGGAATTCAAGATCTGAGAAAGAACTTGGGCAACTCGAGCAGCTCTCCGAGATCTTATCCCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242804.9 |
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