Pregenerated sensors for ZNF44 (Homo sapiens)
Ensembl gene IDs: ENSG00000197857Ensembl transcript IDs: ENST00000355684.6, ENST00000356109.10, ENST00000393337.7, ENST00000397742.7, ENST00000597563.1, ENST00000600003.5
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTCCGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGGAAGGTGGGCCCTTTCTGTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: WLRRSVLVTTGQKLW*SHLGLWKVGPFCFF Trigger: GAAGAAACAGAAAGGGCCCACCTTCCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 90 bp | GCAGGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTaGAAGCTACTGGGCTGGAACAGGAGGGAGAGCCCAGATGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: AGSSTLRVQLSQYLC*KLLGWNRRESPDVF Trigger: GAAGACATCTGGGCTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 90 bp | TCTGTGGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTaGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SVGGVWNVFGWRCYL*FVIMLTLAIRLMPF Trigger: AAAGGGCATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 90 bp | CAAAGACAGGTTTATTATAGAAAAGACCTGAGAGAGGATTCTGGCTaGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAATGTACGTT | + |
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Preference number: 1 (lower is better) Translates to: QRQVYYRKDLREDSG*SVRSTFPCRLRMYV Trigger: AACGTACATTCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAACCTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | AGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGVIVSEPWKTFPGSQVSGQKLW*SHLGLW Trigger: CCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCC...GGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | CGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTGGAGCCACCTCGGCGGAGGATCATTTGCTTaGGAGGCAGCAGTTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RRSVLVTTGQKLWWSHLGGGSFA*EAAVSV Trigger: CACTGAAACTGCTGCCTCCCAAGCAAATGATCCTCC...GCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | CGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCCGTTTGGGATAAGCGGCTaGTGGCATGGCCAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RCHCLGAMENISRLPGVPFGISG*WHGQGF Trigger: GAAGCCTTGGCCATGCCACCAGCCGCTTATCCCAAA...CGGGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | CGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTGGAGCCACCTCGGCTCTGTTTCTTCCTTCTaGACGGGGGTTCACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RRSVLVTTGQKLWWSHLGSVSSF*TGVHKC Trigger: ACACTTGTGAACCCCCGTCCAGAAGGAAGAAACAGA...GCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 90 bp | GTGAGCAGGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTaGCTGGAAGCTACTGGGCTGGAACAGGAGGGAGAGCCCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: VSRQFHTPCPIEPVP*LEATGLEQEGEPRC Trigger: ACATCTGGGCTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | ATCGGAAACCCTGTACAGGGACTGTACATGAAATCTGAGGCCAGCTTTCCAAGGACCGGACAGAAGCTGTaGTGGAGCCACCTCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: IGNPVQGLYMKSEASFPRTGQKL*WSHLGL Trigger: GAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGT...CCTTGGAAAGCTGGCCTCAGATTTCATGTACAGTCCCTGTACAGGGTTTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGGGGTTATCCCGAGGCTAGCATTTCTCTGTGGGAGGTGTCTGGAATGTCACTCCGTGTCCAATTaGGCCAGTACCTTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RRGVIPRLAFLCGRCLECHSVSN*ASTFAG Trigger: TCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTG...ACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGGGATAACCCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGGGGTTATCCCGAGGCTAGCATTTCTCTGTGGGAGGTGTCTGGAATGTGCGGCATGTTCTTTCTaGCTACTTCCTGCTGACGAG | + |
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Preference number: 2 (lower is better) Translates to: RRGVIPRLAFLCGRCLECAACSF*LLPADE Trigger: CTCGTCAGCAGGAAGTAGCCAGAAAGAACATGCCGC...ACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGGGATAACCCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 90 bp | CAGTCAGCTGGATTAGTGTCTGATGTTAACGTTCCAGTTGGCCTCTaGGGCTGCAGCTATAGAAGCCAGGTGCTGATGGCTTCCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: QSAGLVSDVNVPVGL*GCSYRSQVLMASLI Trigger: GATGAGGGAAGCCATCAGCACCTGGCTTCTATAGCTGCAGCCCAAGAGGCCAACTGGAACGTTAACATCAGACACTAATCCAGCTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTTATTATAGAAAAGACCTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCAGCCACCTCGGCCTCTaGAAGGTGGGCCCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QVYYRKDLREDSGWSVRSSHLGL*KVGPFC Trigger: ACAGAAAGGGCCCACCTTCCAGAGGCCGAGGTGGCT...GCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGATTGAGCCAGTACCTTTaGTGGAAGCTACTGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LREDSGWSVRSTFPCRLRLSQYL*WKLLGW Trigger: CCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAA...TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGGATCTCCTGGCCTCGTaGTCTGCCCTCCTCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMDLLAS*SALLGL Trigger: GAGGCCGAGGAGGGCAGATCACGAGGCCAGGAGATC...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR TCA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTCCTGCCTCAGCCTCCTaGGTAGCTAGGACTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSPASAS*VARTTG Trigger: ACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGG...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGGGGATAAGCGGCTGGTaGCATGGCCAAGGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMGISGW*HGQGFL Trigger: GAGGAAGCCTTGGCCATGCCACCAGCCGCTTATCCC...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAATGTACATAGAAGCCAGGTGCTaGTGGCTTCCCTCATCACAT | + |
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Preference number: 2 (lower is better) Translates to: EDSGWSVRSTFPCRLRMYIEARC*WLPSSH Trigger: ATGTGATGAGGGAAGCCATCAGCACCTGGCTTCTAT...GTACATTCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGCTTATTACAAGCTTGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAAGCCAGTACCTTTGCTaGAAGCTACTGGGCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RELITSLECFCVGEKFVASQYLC*KLLGWN Trigger: GTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCT...TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCGATCTCCTGGCCTCGTaGTCTGCCCTCCTCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: MRIFHFIKELASVDLGILDLLAS*SALLGL Trigger: GAGGCCGAGGAGGGCAGATCACGAGGCCAGGAGATC...GAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGCCTGGCCTCGTGATCTaGCCTCCTCGGCCTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: NVGRYMRIFHFIKELASVPGLVI*PPRPLK Trigger: TTTGAGAGGCCGAGGAGGGCAGATCACGAGGCCAGG...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTCTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ENVGRYMRIFHFIKELASLVSIS*PRDLPS Trigger: GGAGGGCAGATCACGAGGCCAGGAGATCGAGACCAG...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGCTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NVGRYMRIFHFIKELASVLVSIS*PRDLPS Trigger: GGAGGGCAGATCACGAGGCCAGGAGATCGAGACCAG...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGTCGGCCTCTGGAAGGTaGGCCCTTTCTGTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMSASGR*ALSVSS Trigger: GGAAGAAACAGAAAGGGCCCACCTTCCAGAGGCCGA...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAGCTAGCATTTCTCTGTaGGAGGTGTCTGGAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: LREDSGWSVRSTFPCRLRASISL*EVSGMF Trigger: AAACATTCCAGACACCTCCCACAGAGAAATGCTAGC...TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGCCTGCCTCAGCCTCCTaGGTAGCTAGGACTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMPASAS*VARTTG Trigger: ACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGG...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGCCTGGCCTCGTGATCTaGCCTCCTCGGCCTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: IQENVGRYMRIFHFIKELPGLVI*PPRPLK Trigger: TTTGAGAGGCCGAGGAGGGCAGATCACGAGGCCAGG...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGGGTGGGAGGATCATTTaGTTGGGAGGCAGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMGGRII*LGGSSF Trigger: GAAACTGCTGCCTCCCAAGCAAATGATCCTCCCACC...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGGGGTTATCCCGAGGCTAGCATTTCTCTGTGGGAGGTGTCTGGAATGTTTCCAAGGGCTTTATTaGCTCCATAAGTCAAATTTG | + |
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Preference number: 2 (lower is better) Translates to: RRGVIPRLAFLCGRCLECFQGLY*LHKSNL Trigger: CAAATTTGACTTATGGAGCCAATAAAGCCCTTGGAA...ACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGGGATAACCCCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 90 bp | CCGAGGCTAGCATTTCTCTGTGGGAGGTGTCTGGAATGTTTTTGGTaGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PRLAFLCGRCLECFW*EMLFVVCDHADLSH Trigger: ATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGCACCCAAGCTGGAGTaGAGTAGTGCAATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: NVGRYMRIFHFIKELASVAPKLE*SSAISA Trigger: AGCCGAGATTGCACTACTGCACTCCAGCTTGGGTGC...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR GCA 90 bp | CGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGGCACCCAAGCTGGAGTaGAGTAGTGCAATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: RIFHFIKELASVDLGILRAPKLE*SSAISA Trigger: AGCCGAGATTGCACTACTGCACTCCAGCTTGGGTGC...CCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGCCGCTGCGCCCAGCCTaGAAACTTCTTAAGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMPLRPA*KLLKAL Trigger: TAAAGCCTTAAGAAGTTTCCAGGCTGGGCGCAGCGG...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR TCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGGCTTATCCACAATGGTaGTGCTTCTGCTCTGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMAYPQW*CFCSVN Trigger: ATTGACAGAGCAGAAGCATCACCATTGTGGATAAGC...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CCA 90 bp | ATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCCCGCTGCGCCCAGCCTaGAAACTTCTTAAGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: MRIFHFIKELASVDLGILPLRPA*KLLKAL Trigger: TAAAGCCTTAAGAAGTTTCCAGGCTGGGCGCAGCGG...GAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGTCCATAAGTCAAATTTaGTTCCTTAAAGGAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRSISQI*FLKGRH Trigger: GTGCCTTCCTTTAAGGAATCAAATTTGACTTATGGA...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | TGTCCCGGGTCCTCCCTTGGCTCCGGAGATCAGTGCTaGTCACCACCGGACAGAAGCTGTGGTGGAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: CPGSSLGSGDQC*SPPDRSCGGAT Trigger: GGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | AGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGGAAGGTGGGCCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RSVLVTTGQKLW*SHLGLWKVGPF Trigger: GAAAGGGCCCACCTTCCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR TCA 72 bp | ACGAGGGGCGGCATGTTCTTTCTGGCTACTTCCTGCTaGCGAGGGGACAGAGAGTTCTCTGGTATCGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: TRGGMFFLATSC*RGDREFSGIGL Trigger: CAACCCGATACCAGAGAACTCTCTGTCCCCTCGTCAGCAGGAAGTAGCCAGAAAGAACATGCCGCCCCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | TCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTaGAAGCTACTGGGCTGGAACAGGAGGGAGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: STLRVQLSQYLC*KLLGWNRRESP Trigger: TGGGCTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTTGGAATGTTCTGGGCGGAGGGGTATTGAGCCAGTACCTTaGCTGGAAGCTACTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FCVGEKFVAGLECSGRRGIEPVP*LEATGL Trigger: CAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAAT...ACCCCTCCGCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR GCA 72 bp | AGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTaGTGGAAGCTACTGGGCTGGAACAGGAGGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SSTLRVQLSQYL*WKLLGWNRRES Trigger: GCTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | CAATTGAGCCAGTACCTTTGCTGGAAGCTACTGGGCTaGAACAGGAGGGAGAGCCCAGATGTCTTCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: QLSQYLCWKLLG*NRRESPDVFQG Trigger: TCCCTGGAAGACATCTGGGCTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR TCA 72 bp | AAGTGTGAGCAGGCAGTTCCACACTCCGTGTCCAATTaGGCCAGTACCTTTGCTGGAAGCTACTGGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: KCEQAVPHSVSN*ASTFAGSYWAG Trigger: TCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCCTGCTCACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | AATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTTaGAATGTTCTGGGCGGAGGGGTGGTTATCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: NVSVWGRSLWQG*NVLGGGVVILG Trigger: CCCCAAGATAACCACCCCTCCGCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAAACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAGGGGTTATCCCGAGGCTAGCATTTCTCTGTGGGAGGTGTCTGGAATGTACACTCCGTGTCCAATaGAGCCAGTACCTTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRGVIPRLAFLCGRCLECTLRVQ*SQYLCW Trigger: CCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGT...ACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGGGATAACCCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAATGTACGTTCCAGTTGGCCTCTaGGGCTGCAGCTATAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EDSGWSVRSTFPCRLRMYVPVGL*GCSYRS Trigger: GCTTCTATAGCTGCAGCCCAAGAGGCCAACTGGAAC...GTACATTCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | GAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAATGTACAAGTTTGTGGCAGGGTaGGAATGTTCTGGGCGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EDSGWSVRSTFPCRLRMYKFVAG*ECSGRR Trigger: CCTCCGCCCAGAACATTCCAACCCTGCCACAAACTT...GTACATTCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | CAGGAGAGGGGTTATCCCGAGGCTAGCATTTCTCTGTaGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: QERGYPEASISL*EVSGMFLVGDV Trigger: AACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAGAAATGCTAGCCTCGGGATAACCCCTCTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | CGGGTTGGTAGGAGCAGTGCCGTCTGTAGATATTTTTaGGTAGTTGTCTGTGAAATGGCCATGATCCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RVGRSSAVCRYF*VVVCEMAMILS Trigger: TGACAGGATCATGGCCATTTCACAGACAACTACCCAAAAATATCTACAGACGGCACTGCTCCTACCAACCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTTATTATAGAAAAGACCTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCGGTTGGAGATGTTATTaGTGGTTTGTGATCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVYYRKDLREDSGWSVRSGWRCY*WFVIML Trigger: CAGCATGATCACAAACCACAAATAACATCTCCAACC...GCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR TCA 72 bp | TTGACAGTCAAAGACAGGTTTATTATAGAAAAGACCTaGGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LTVKDRFIIEKT*ERILAGQSGAL Trigger: AAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAACCTGTCTTTGACTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| 3UTR CCA 72 bp | GGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTaGTTTGTGATCATGCTGACCTTAGCCATTAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVWNVFGWRCYL*FVIMLTLAIRL Trigger: CAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CCA 72 bp | GTTTATTATAGAAAAGACCTGAGAGAGGATTCTGGCTaGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VYYRKDLREDSG*SVRSTFPCRLR Trigger: TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGAACCAGTTTTCCCAATaGTGTCCAGTCAGCTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRNQFSQ*CPVSWI Trigger: AATCCAGCTGACTGGACACAATTGGGAAAACTGGTT...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGCTTATTACAAGCTTGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGTGTCTGGAATGTTTTaGGTTGGAGATGTTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RELITSLECFCVGEKFVAVSGMF*VGDVIC Trigger: ACAAATAACATCTCCAACCAAAAACATTCCAGACAC...TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| 3UTR TCA 72 bp | CTTTCCAAGGGCTTTATTGGCTCCATAAGTCAAATTTaGTTCCTTAAAGGAAGGCACACCATTCCAGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSKGFIGSISQI*FLKGRHTIPVK Trigger: TTTAACTGGAATGGTGTGCCTTCCTTTAAGGAATCAAATTTGACTTATGGAGCCAATAAAGCCCTTGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | CCAGGTGTCCCGGGTCCTCCCTTGGCTCCGGAGATCAGTGCTGGTCACCACCGGATCCTCAAAGGCCACTaGGTCCTGATCCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVPGPPLAPEISAGHHRILKGH*VLILWE Trigger: CTCCCAAAGGATCAGGACTCAGTGGCCTTTGAGGAT...CCGGTGGTGACCAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGACACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCGGGTCCTCCCTTGGCTCCGGAGATCAGTGCTGGTCACCACCGGACAGAATCGGCCTCTGGAAGGTaGGCCCTTTCTGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPGPPLAPEISAGHHRTESASGR*ALSVSS Trigger: GGAAGAAACAGAAAGGGCCCACCTTCCAGAGGCCGA...TTCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | CGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTGGAGCCACCTCGGCCCAAGAGAACACTACTaGACTCCAGCCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRSVLVTTGQKLWWSHLGPREHY*TPAWVT Trigger: TGTCACCCAGGCTGGAGTTCAGTAGTGTTCTCTTGG...GCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CCA 90 bp | CGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCCGAGCCACCTCGGCCTCTaGAAGGTGGGCCCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCHCLGAMENISRLPGVPSHLGL*KVGPFC Trigger: ACAGAAAGGGCCCACCTTCCAGAGGCCGAGGTGGCT...CGGGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CCAGGTGTCCCGGGTCCTCCCTTGGCTCCGGAGATCAGTGCTGGTCACCACCGGTGGAATGTTTCTGTGTaGGGGAGAAGTTTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVPGPPLAPEISAGHHRWNVSV*GRSLWQ Trigger: CTGCCACAAACTTCTCCCCCACACAGAAACATTCCA...CCGGTGGTGACCAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGACACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | CGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTGGAGCCACCTCGGCGCTTATCCACAATGGTaGTGCTTCTGCTCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRSVLVTTGQKLWWSHLGAYPQW*CFCSVN Trigger: ATTGACAGAGCAGAAGCATCACCATTGTGGATAAGC...GCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR GCA 90 bp | GGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTACTGGGCTCCGGAGATCAGTaGTGGTCACCACCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSTLRVQLSQYLCWKLLGSGDQ*WSPPDR Trigger: TCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCC...CAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCAGTTTGTGGCAGGGTTaGAATGTTCTGGGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGVIVSEPWKTFPGSQVSSLWQG*NVLGGG Trigger: CCCTCCGCCCAGAACATTCCAACCCTGCCACAAACT...GGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LREDSGWSVRSTFPCRLRGQKLW*SHLGLW Trigger: CCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCC...TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 72 bp | CAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTaGCTGGAAGCTACTGGGCTGGAACAGGAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFHTPCPIEPVP*LEATGLEQEGE Trigger: CTCTCCCTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | ATCGGAAACCCTGTACAGGGACTGTACATGAAATCTGAGGCCAGCTTTCCAAGGAAGGCCACTGAGTCCTaGTCCTTTGGGAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGNPVQGLYMKSEASFPRKATES*SFGRPH Trigger: GTGGGGCCTCCCAAAGGATCAGGACTCAGTGGCCTT...CCTTGGAAAGCTGGCCTCAGATTTCATGTACAGTCCCTGTACAGGGTTTCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTACTGGGCTGGAACAGGAGCCAGTACCTTTGCTaGAAGCTACTGGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQLSQYLCWKLLGWNRSQYLC*KLLGWN Trigger: GTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCT...CCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTCCTGAGAGAGGATTCTaGCTGGTCAGTCAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRQFHTPCPIEPVPLLEAPERGF*LVSQEH Trigger: GTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAGG...AGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 72 bp | GAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTaGGAATGTTCTGGGCGGAGGGGTGGTTATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECFCVGEKFVAG*ECSGRRGGYLG Trigger: CCCAAGATAACCACCCCTCCGCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAAACATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | AGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCAAGACCACCAAGCCGTaGCATATCCCAGATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVIVSEPWKTFPGSQVSKTTKP*HIPDMC Trigger: ACACATATCTGGGATATGTCACGGCTTGGTGGTCTT...GGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | TTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTTGGAATGTTCTGGGCGGAGGGGTTCTAGACTCAATTCATaGGAGTTCACACTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCVGEKFVAGLECSGRRGSRLNS*EFTLKR Trigger: CCGCTTCAGTGTGAACTCTCATGAATTGAGTCTAGA...ACCCCTCCGCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | GAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAATGTACTCCGGAGATCAGTGCTaGTCACCACCGGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDSGWSVRSTFPCRLRMYSGDQC*SPPDRS Trigger: GCTTCTGTCCGGTGGTGACCAGCACTGATCTCCGGA...GTACATTCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTTATTACAAGCTTGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGGGATAAGCGGCTGGTaGCATGGCCAAGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RELITSLECFCVGEKFVAGISGW*HGQGFL Trigger: GAGGAAGCCTTGGCCATGCCACCAGCCGCTTATCCC...TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCTCCCAGGTGTCCTCTGTGGGAGGTGTCTaGAATGTTTTTGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGVIVSEPWKTFPGSQVSSVGGV*NVFGWR Trigger: TCTCCAACCAAAAACATTCCAGACACCTCCCACAGA...GGACACCTGGGAGCCGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTTGGGGGAGAAGTTTGTaGCAGGGTTGGAATGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRQFHTPCPIEPVPLLEAWGRSL*QGWNVL Trigger: CAGAACATTCCAACCCTGCCACAAACTTCTCCCCCA...AGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGACACTCCGTGTCCAATTaGGCCAGTACCTTTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LREDSGWSVRSTFPCRLRHSVSN*ASTFAG Trigger: TCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTG...TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR GCA 90 bp | AGAGTTCACACTGAAGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGGTGGGAGGATCATTTaGTTGGGAGGCAGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVHTEAVSLSRSHGKHFPGGRII*LGGSSF Trigger: GAAACTGCTGCCTCCCAAGCAAATGATCCTCCCACC...CGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCTTCAGTGTGAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTGGTTTGTTCCCGGGTCCTCCCTTaGCTCCGGAGATCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGRCLECFWLEMLFVVCSRVLP*LRRSVL Trigger: CAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGA...ACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGAGTTCACACTGAAGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGGCGGCATGTTCTTTCTaGCTACTTCCTGCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVHTEAVSLSRSHGKHFPAACSF*LLPADE Trigger: CTCGTCAGCAGGAAGTAGCCAGAAAGAACATGCCGC...CGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCTTCAGTGTGAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| 3UTR CAA 72 bp | GGATTAGTGTCTGATGTTAACGTTCCAGTTGGCCTCTaGGGCTGCAGCTATAGAAGCCAGGTGCTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSDVNVPVGL*GCSYRSQVLMA Trigger: AGCCATCAGCACCTGGCTTCTATAGCTGCAGCCCAAGAGGCCAACTGGAACGTTAACATCAGACACTAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR TCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGATCTCCTGGCCTCGTaGTCTGCCCTCCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENVGRYMRIFHFIKELASDLLAS*SALLGL Trigger: GAGGCCGAGGAGGGCAGATCACGAGGCCAGGAGATC...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGACCGGACAGAAGCTGTaGTGGAGCCACCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRTGQKL*WSHLGL Trigger: GAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGT...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCACTTTTCCTTGCAGACTAAGAGGAGGATCATTTGCTTaGGAGGCAGCAGTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LREDSGWSVRSTFPCRLRGGSFA*EAAVSV Trigger: CACTGAAACTGCTGCCTCCCAAGCAAATGATCCTCC...TCTTAGTCTGCAAGGAAAAGTGCTCCTGACTGACCAGCCAGAATCCTCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTTATTACAAGCTTGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCATTTGGGATAAGCGGCTaGTGGCATGGCCAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RELITSLECFCVGEKFVAFGISG*WHGQGF Trigger: GAAGCCTTGGCCATGCCACCAGCCGCTTATCCCAAA...TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGATCTCCTGGCCTCGTaGTCTGCCCTCCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQENVGRYMRIFHFIKELDLLAS*SALLGL Trigger: GAGGCCGAGGAGGGCAGATCACGAGGCCAGGAGATC...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | CCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTACTGGGCTGGAACAGGAGTGGAGATGTTATTTGTaGTTTGTGATCATGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PCPIEPVPLLEATGLEQEWRCYL*FVIMLT Trigger: GGTCAGCATGATCACAAACCACAAATAACATCTCCA...CTCCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCCACTAGGCCCTCCATaGGATTGGCAGCTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRPLGPP*DWQLPA Trigger: TGCTGGAAGCTGCCAATCTCATGGAGGGCCTAGTGG...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGAAGGCCACTGAGTCCTaGTCCTTTGGGAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMKATES*SFGRPH Trigger: GTGGGGCCTCCCAAAGGATCAGGACTCAGTGGCCTT...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356109.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGGCTACTTCCTGCTaGCGAGGGGACAGAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRLATSC*RGDREF Trigger: GAACTCTCTGTCCCCTCGTCAGCAGGAAGTAGCCAG...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR GCA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTCACACTGCTTCCACATaGATCTACTCTGGCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSHTAST*IYSGGS Trigger: ACTCCCGCCAGAGTAGATGCATGTGGAAGCAGTGTG...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR CCA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTCCGCTGCGCCCAGCCTaGAAACTTCTTAAGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSPLRPA*KLLKAL Trigger: TAAAGCCTTAAGAAGTTTCCAGGCTGGGCGCAGCGG...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR TCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGCCACTAGGCCCTCCATaGGATTGGCAGCTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVGRYMRIFHFIKELASVPLGPP*DWQLPA Trigger: TGCTGGAAGCTGCCAATCTCATGGAGGGCCTAGTGG...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356109.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGTTCCACACTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTACTGTCCATAAGTCAAATTTaGTTCCTTAAAGGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSTLRVQLSQYLCWKLLSISQI*FLKGRH Trigger: GTGCCTTCCTTTAAGGAATCAAATTTGACTTATGGA...CAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGTGGAACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR GCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGTTGAGCCAGTACCTTTaGTGGAAGCTACTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMLSQYL*WKLLGW Trigger: CCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAA...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGAGGCCACTAGCTCCTaGAACGTCACACCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENVGRYMRIFHFIKELASEATSS*NVTPSS Trigger: AGAGGAGGGTGTGACGTTCCAGGAGCTAGTGGCCTC...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGCTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQENVGRYMRIFHFIKELLVSIS*PRDLPS Trigger: GGAGGGCAGATCACGAGGCCAGGAGATCGAGACCAG...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTATTATAGAAAAGACCTGAGAGAGGATTCTGGCTGGTCAGTCAGGAGCTCTGTTTCTTCCTTCTaGACGGGGGTTCACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVYYRKDLREDSGWSVRSSVSSF*TGVHKC Trigger: ACACTTGTGAACCCCCGTCCAGAAGGAAGAAACAGA...GCTCCTGACTGACCAGCCAGAATCCTCTCTCAGGTCTTTTCTATAATAAACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTGGTTTGTCATGAGAGTTCACACTaGAGCGGTGTCATTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCGRCLECFWLEMLFVVCHESSH*SGVIVS Trigger: CGAGACAATGACACCGCTTCAGTGTGAACTCTCATG...ACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTGGTTTGTATAGAAGCCAGGTGCTaGTGGCTTCCCTCATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LCGRCLECFWLEMLFVVCIEARC*WLPSSH Trigger: ATGTGATGAGGGAAGCCATCAGCACCTGGCTTCTAT...ACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGAGGCAGCAGTTTCAGTaGGCCAAGAGAACACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMRQQFQ*AKRTLL Trigger: CAGTAGTGTTCTCTTGGCTCACTGAAACTGCTGCCT...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR GCA 90 bp | CATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCCTGGCCTCGTGATCTaGCCTCCTCGGCCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HANIPFYKRAGICGFRYTPGLVI*PPRPLK Trigger: TTTGAGAGGCCGAGGAGGGCAGATCACGAGGCCAGG...AGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR GCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGCACCCAAGCTGGAGTaGAGTAGTGCAATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENVGRYMRIFHFIKELASAPKLE*SSAISA Trigger: AGCCGAGATTGCACTACTGCACTCCAGCTTGGGTGC...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR CCA 90 bp | CATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HANIPFYKRAGICGFRYTLVSIS*PRDLPS Trigger: GGAGGGCAGATCACGAGGCCAGGAGATCGAGACCAG...AGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTATTACAAGCTTGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGCTAGCATTTCTCTGTaGGAGGTGTCTGGAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RELITSLECFCVGEKFVAASISL*EVSGMF Trigger: AAACATTCCAGACACCTCCCACAGAGAAATGCTAGC...TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| 3UTR CAA 72 bp | TACGTTGGTTTTAGGGTGAGGGAGCTTATTACAAGCTaGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVGFRVRELITS*ECFCVGEKFVA Trigger: TGCCACAAACTTCTCCCCCACACAGAAACATTCCAAGCTTGTAATAAGCTCCCTCACCCTAAAACCAACGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGATCCTCAAAGGCCACTaGGTCCATTTCCCGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQENVGRYMRIFHFIKELILKGH*VHFPAV Trigger: CACAGCCGGGAAATGGACTCAGTGGCCTTTGAGGAT...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355684.6 |
||
| CDS-3UTR TCA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTTTCTCTGCATATTCATaGCACTCCCGGTGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSFSAYS*HSRCLC Trigger: ACACAAACACCGGGAGTGTCATGAATATGCAGAGAA...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR GCA 90 bp | ATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGGTGTAGCACCCAAGCTGGAGTaGAGTAGTGCAATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPFYKRAGICGFRYTQGVAPKLE*SSAISA Trigger: AGCCGAGATTGCACTACTGCACTCCAGCTTGGGTGC...TACACCCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCACACTGAAGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGTTCCAAGGGCTTTATTaGCTCCATAAGTCAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVHTEAVSLSRSHGKHFPFQGLY*LHKSNL Trigger: CAAATTTGACTTATGGAGCCAATAAAGCCCTTGGAA...CGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCTTCAGTGTGAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CCA 90 bp | TGGAATGTTTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTTGGAATGTTCTGGGCGTCTGTAGATATTTTTaGGTAGTTGTCTGTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: WNVSVWGRSLWQGWNVLGVCRYF*VVVCEM Trigger: CATTTCACAGACAACTACCCAAAAATATCTACAGAC...GCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAAACATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR TCA 90 bp | CGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGATCCTCAAAGGCCACTaGGTCCTGATCCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIFHFIKELASVDLGILRILKGH*VLILWE Trigger: CTCCCAAAGGATCAGGACTCAGTGGCCTTTGAGGAT...CCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356109.10 |
||
| 3UTR CAA 72 bp | GGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTaGTGGTTTGTGATCATGCTGACCTTAGCCATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGVWNVFGWRCY*WFVIMLTLAIR Trigger: CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR GCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGCTTCTCCATTCACACTaGTTCCACATGCATCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMLLHSH*FHMHLL Trigger: GAGTAGATGCATGTGGAAGCAGTGTGAATGGAGAAG...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR GCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTCTTCTCCATTCACACTaGTTCCACATGCATCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: ENVGRYMRIFHFIKELASLLHSH*FHMHLL Trigger: GAGTAGATGCATGTGGAAGCAGTGTGAATGGAGAAG...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGCACATGCATCTACTCTaGCGGGAGTGTTCTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NVGRYMRIFHFIKELASVHMHLL*RECSCL Trigger: TAAACAAGAACACTCCCGCCAGAGTAGATGCATGTG...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR TCA 90 bp | AATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGTTCATGAATTCGTGCTaGACCAGGAAAATCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVGRYMRIFHFIKELASVFMNSC*TRKIKA Trigger: GGCTTTGATTTTCCTGGTTCAGCACGAATTCATGAA...CACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR TCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGGATTTTTCTTCACTGTaGGTCCTTTCATGGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMDFSSL*VLSWRQ Trigger: TTGTCGCCATGAAAGGACTCACAGTGAAGAAAAATC...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR GCA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGAGGAGCACTTTTCCTTaGAGACTAAGAATGTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRRSTFP*RLRMYV Trigger: AACGTACATTCTTAGTCTGCAAGGAAAAGTGCTCCT...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CCA 90 bp | CGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGCACATGCATCTACTCTaGCGGGAGTGTTCTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RIFHFIKELASVDLGILRHMHLL*RECSCL Trigger: TAAACAAGAACACTCCCGCCAGAGTAGATGCATGTG...CCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR TCA 90 bp | ATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCTTCTCTGCATATTCATaGCACTCCCGGTGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRIFHFIKELASVDLGILFSAYS*HSRCLC Trigger: ACACAAACACCGGGAGTGTCATGAATATGCAGAGAA...GAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR TCA 90 bp | ATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGGTGTATTCATGAATTCGTGCTaGACCAGGAAAATCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFYKRAGICGFRYTQGVFMNSC*TRKIKA Trigger: GGCTTTGATTTTCCTGGTTCAGCACGAATTCATGAA...TACACCCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | ACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTATTTGAAAGAAATGTACCACATCACACCTTaGATTTCTCCTGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTNLLAYSRQQLYLKEMYHITP*ISPEIL Trigger: CAAAATCTCAGGAGAAATCCAAGGTGTGATGTGGTA...CATTTCTTTCAAATAGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | GAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTATACAGGAGAATGTaGGTAGGTACATGCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ENVGRYMRIFHFIKELASVYRRM*VGTCEY Trigger: ATATTCGCATGTACCTACCCACATTCTCCTGTATAC...AGATGCCAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
||
| CDS-3UTR TCA 90 bp | ATGCGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCGATTTTTCTTCACTGTaGGTCCTTTCATGGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: MRIFHFIKELASVDLGILDFSSL*VLSWRQ Trigger: TTGTCGCCATGAAAGGACTCACAGTGAAGAAAAATC...GAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | CGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGTACCACATCACACCTTaGATTTCTCCTGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIFHFIKELASVDLGILRYHITP*ISPEIL Trigger: CAAAATCTCAGGAGAAATCCAAGGTGTGATGTGGTA...CCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CCA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGGTATACAGGAGAATGTaGGTAGGTACATGCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: IQENVGRYMRIFHFIKELVYRRM*VGTCEY Trigger: ATATTCGCATGTACCTACCCACATTCTCCTGTATAC...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS CCA 90 bp | TGGCTCCGGAGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGGAAGGCTGAATTCAGTGGGTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLRRSVLVTTGQKLW*SHLGLWKAEFSGLG Trigger: CCCTAACCCACTGAATTCAGCCTTCCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597563.1 |
||
| CDS-3UTR CAA 90 bp | GTCCCGGGTCCTCCCTTGGCTCCGGAGATCAGTGCTGGTCACCACCGGACAGAAGTTCCAGTTGGCCTCTaGGGCTGCAGCTATAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPPLAPEISAGHHRTEVPVGL*GCSYRS Trigger: GCTTCTATAGCTGCAGCCCAAGAGGCCAACTGGAAC...TTCTGTCCGGTGGTGACCAGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTGGGGGAGAAGTTTGTGGCAGGGTTGGAATGTTCTGGGCGGAGGGGTGTGTGGGGGAGAAGTTaGTGGCAGGGTTGGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCVGEKFVAGLECSGRRGVWGRS*WQGWNV Trigger: AACATTCCAACCCTGCCACAAACTTCTCCCCCACAC...ACCCCTCCGCCCAGAACATTCCAACCCTGCCACAAACTTCTCCCCCACACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | CTCCGTGTCCAATTGAGCCAGTACCTTTGCTGGAAGCTACTGGGCTGGAACAGGACACTCCGTGTCCAATaGAGCCAGTACCTTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRVQLSQYLCWKLLGWNRTLRVQ*SQYLCW Trigger: CCAGCAAAGGTACTGGCTCAATTGGACACGGAGTGT...CCTGTTCCAGCCCAGTAGCTTCCAGCAAAGGTACTGGCTCAATTGGACACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCACACTGAAGCGGTGTCATTGTCTCGGAGCCATGGAAAACATTTCCCGAAGTTTGTGGCAGGGTaGGAATGTTCTGGGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVHTEAVSLSRSHGKHFPKFVAG*ECSGRR Trigger: CCTCCGCCCAGAACATTCCAACCCTGCCACAAACTT...CGGGAAATGTTTTCCATGGCTCCGAGACAATGACACCGCTTCAGTGTGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGGTCCCGGGTCCTCCCTaGGCTCCGGAGATCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGWRCYLWFVIMLTLAIRVPGPP*APEISA Trigger: AGCACTGATCTCCGGAGCCAAGGGAGGACCCGGGAC...CCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCAACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS TCA 90 bp | GCAGTTTCAGTGAGCCAAGAGAACACTACTGAACTCCAGCCTGGGTaGCAGGGAGACCCTGTCCTGTTGAAAACTGTAACAAACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSVSQENTTELQPG*QGDPVLLKTVTNLH Trigger: ATGGAGGTTTGTTACAGTTTTCAACAGGACAGGGTCTCCCTGTCACCCAGGCTGGAGTTCAGTAGTGTTCTCTTGGCTCACTGAAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTAGGCCCTCCATGAGATaGGCAGCTTCCAGCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSRPSMR*AASSIL Trigger: TAAGATGCTGGAAGCTGCCAATCTCATGGAGGGCCT...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356109.10 |
||
| CDS-3UTR CAA 90 bp | ATCGGAAACCCTGTACAGGGACTGTACATGAAATCTGAGGCCAGCTTTCCAAGGAACCAGTTTTCCCAATaGTGTCCAGTCAGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IGNPVQGLYMKSEASFPRNQFSQ*CPVSWI Trigger: AATCCAGCTGACTGGACACAATTGGGAAAACTGGTT...CCTTGGAAAGCTGGCCTCAGATTTCATGTACAGTCCCTGTACAGGGTTTCCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGGGAGGTGTCTGGAATGTTTTTGGTTGGAGATGTTATTTGTGGTTTGTAGGCCCTCCATGAGATaGGCAGCTTCCAGCATCTTA | + |
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Preference number: 5 (lower is better) Translates to: LCGRCLECFWLEMLFVVCRPSMR*AASSIL Trigger: TAAGATGCTGGAAGCTGCCAATCTCATGGAGGGCCT...ACAAACCACAAATAACATCTCCAACCAAAAACATTCCAGACACCTCCCACAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CAA 90 bp | CGAATATTCCATTTTATAAAAGAGCTGGCATCTGTGGATTTAGGTATACTCAGGCTGAGTCCTGATCCTTaGGGAGGCCCCACTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: RIFHFIKELASVDLGILRLSPDP*GGPTPT Trigger: TGTTGGAGTGGGGCCTCCCAAAGGATCAGGACTCAG...CCTGAGTATACCTAAATCCACAGATGCCAGCTCTTTTATAAAATGGAATATTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000356109.10 |
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| CDS-3UTR CAA 90 bp | TATACTCAGGGTGTACTGGAACCAATCTTCTTGCATATAGCAGGCAGCAACTCTCTGGCGGGAGTGTTCTaGTTTACAATACTATTTCGA | + |
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Preference number: 5 (lower is better) Translates to: YTQGVLEPIFLHIAGSNSLAGVF*FTILFR Trigger: TCGAAATAGTATTGTAAACAAGAACACTCCCGCCAG...AGAGTTGCTGCCTGCTATATGCAAGAAGATTGGTTCCAGTACACCCTGAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS-3UTR CAA 90 bp | TGGAGATGTTATTTGTGGTTTGTGATCATGCTGACCTTAGCCATTAGGCTGATGGTGTCTGGAATGTTTTaGGTTGGAGATGTTATTTGT | + |
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Preference number: 5 (lower is better) Translates to: WRCYLWFVIMLTLAIRLMVSGMF*VGDVIC Trigger: ACAAATAACATCTCCAACCAAAAACATTCCAGACAC...CATCAGCCTAATGGCTAAGGTCAGCATGATCACAAACCACAAATAACATCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS-3UTR CAA 90 bp | ATACAGGAGAATGTGGGTAGGTACATGCGAATATTCCATTTTATAAAAGAGCTGCTGGCGGGAGTGTTCTaGTTTACAATACTATTTCGA | + |
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Preference number: 5 (lower is better) Translates to: IQENVGRYMRIFHFIKELLAGVF*FTILFR Trigger: TCGAAATAGTATTGTAAACAAGAACACTCCCGCCAG...CAGCTCTTTTATAAAATGGAATATTCGCATGTACCTACCCACATTCTCCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355684.6 ENST00000356109.10 |
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| CDS CCA 72 bp | ACCGGACAGAAGCTGTGGTGGAGCCACCTCGGCCTCTaGAAGGCTGAATTCAGTGGGTTAGGGGAACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TGQKLWWSHLGL*KAEFSGLGEQE Trigger: CTCCTGTTCCCCTAACCCACTGAATTCAGCCTTCCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597563.1 |
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| CDS CCA 72 bp | AGATCAGTGCTGGTCACCACCGGACAGAAGCTGTGGTaGAGCCACCTCGGCCTCTGGAAGGCTGAATTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RSVLVTTGQKLW*SHLGLWKAEFS Trigger: ACTGAATTCAGCCTTCCAGAGGCCGAGGTGGCTCCACCACAGCTTCTGTCCGGTGGTGACCAGCACTGATCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597563.1 |
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| CDS TCA 72 bp | TGGGAGGATCATTTGCTTGGGAGGCAGCAGTTTCAGTaGGCCAAGAGAACACTACTGAACTCCAGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: WEDHLLGRQQFQ*AKRTLLNSSLG Trigger: ACCCAGGCTGGAGTTCAGTAGTGTTCTCTTGGCTCACTGAAACTGCTGCCTCCCAAGCAAATGATCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600003.5 |
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| CDS TCA 72 bp | TCTAAGATAACTTGGGACTCCTGGCCTGTCAGAAAGTaGCATTCTTTACTTACCACAGATCGGAAACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SKITWDSWPVRK*HSLLTTDRKPC Trigger: ACAGGGTTTCCGATCTGTGGTAAGTAAAGAATGTCACTTTCTGACAGGCCAGGAGTCCCAAGTTATCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597563.1 |
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| CDS CAA 72 bp | CTGCTTCCACATGCATCTACTCTGGCGGGAGTGTTCTaGTTTACAATACTATTTCGAATCTGGCTTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LLPHASTLAGVF*FTILFRIWLKV Trigger: AACCTTAAGCCAGATTCGAAATAGTATTGTAAACAAGAACACTCCCGCCAGAGTAGATGCATGTGGAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000355684.6 ENST00000356109.10 ENST00000393337.7 ENST00000397742.7 |
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| CDS TCA 72 bp | TTTTTAAAGGCAAGGCCAGCCATAGATTTGTACCACTaGATACCTATGAGTTGGGAGAAATCCTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLKARPAIDLYH*IPMSWEKSSLL Trigger: AAGAAGAGAGGATTTCTCCCAACTCATAGGTATTCAGTGGTACAAATCTATGGCTGGCCTTGCCTTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597563.1 |
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