Pregenerated sensors for ZNF439 (Homo sapiens)
Ensembl gene IDs: ENSG00000171291Ensembl transcript IDs: ENST00000592495.1, ENST00000592534.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATGGCCTACGACTTTGGGGGTGGCGGTGCTTTCTTGACTCGGGTGTaGTGGGTCTATCCTTTCTCTGCTGTCCAGACTGCAGTTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: MAYDFGGGGAFLTRV*WVYPFSAVQTAVSM Trigger: CATTGAAACTGCAGTCTGGACAGCAGAGAAAGGATAGACCCATCACACCCGAGTCAAGAAAGCACCGCCACCCCCAAAGTCGTAGGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592534.1 |
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| CDS CCA 90 bp | TCATGTAAAAACAGACATTCTCTGACTGGAAAAACAGACTCCTTGTaGCAACAAGATACCAAATTACAAACAAGACCTAAGGCCACGCAA | + |
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Preference number: 5 (lower is better) Translates to: SCKNRHSLTGKTDSL*QQDTKLQTRPKATQ Trigger: TTGCGTGGCCTTAGGTCTTGTTTGTAATTTGGTATCTTGTTGCCACAAGGAGTCTGTTTTTCCAGTCAGAGAATGTCTGTTTTTACATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CCA 72 bp | GTACTAGGCCAGCTCCTCAGGCCGGTGTTGACGCACTaGGAACTCCAGGAGCCGCACCATTTCCCGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLGQLLRPVLTH*ELQEPHHFPAF Trigger: GAAAGCCGGGAAATGGTGCGGCTCCTGGAGTTCCCAGTGCGTCAACACCGGCCTGAGGAGCTGGCCTAGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592534.1 |
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| CDS TCA 72 bp | GACTTTGGGGGTGGCGGTGCTTTCTTGACTCGGGTGTaGTGGGTCTATCCTTTCTCTGCTGTCCAGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: DFGGGGAFLTRV*WVYPFSAVQTA Trigger: TGCAGTCTGGACAGCAGAGAAAGGATAGACCCATCACACCCGAGTCAAGAAAGCACCGCCACCCCCAAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592534.1 |
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| CDS CCA 72 bp | ATCCTTTCTCTGCTGTCCAGACTGCAGTTTCAATGGTaGGAAGTACTAGGCCAGCTCCTCAGGCCGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILSLLSRLQFQW*EVLGQLLRPVL Trigger: CAACACCGGCCTGAGGAGCTGGCCTAGTACTTCCCACCATTGAAACTGCAGTCTGGACAGCAGAGAAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592534.1 |
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| CDS TCA 72 bp | TCCTGTCTCTCTGAAATGAATAAAACCAAACTGTCCTaGGCCGCCTCCGGACCACTTACTCCAGGCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SCLSEMNKTKLS*AASGPLTPGCL Trigger: CAAGCAGCCTGGAGTAAGTGGTCCGGAGGCGGCTCAGGACAGTTTGGTTTTATTCATTTCAGAGAGACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS GCA 72 bp | CCAAACTTTAGACAAAGCTTCACACTCTCAACCAGCTaGCACCTACAGAATCCCTCAACCACCTGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PNFRQSFTLSTS*HLQNPSTTCAS Trigger: GGAGGCACAGGTGGTTGAGGGATTCTGTAGGTGGCAGCTGGTTGAGAGTGTGAAGCTTTGTCTAAAGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CCA 72 bp | AACACCCTGAAAATTGAGTGCCTCTGTATGACAGGATaGGAGGTGAGACAGGTCTCCTTATACCCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NTLKIECLCMTG*EVRQVSLYPLP Trigger: AGGGAGAGGGTATAAGGAGACCTGTCTCACCTCCCATCCTGTCATACAGAGGCACTCAATTTTCAGGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS TCA 72 bp | CTGCACTTTGTGACTCGTCTTGAATTCCTTCCTGTGTaGGATCCAAGAACTCTCTTGGGGTCTGATCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LHFVTRLEFLPV*DPRTLLGSDQD Trigger: GTCCTGATCAGACCCCAAGAGAGTTCTTGGATCTCACACAGGAAGGAATTCAAGACGAGTCACAAAGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS TCA 72 bp | ACCCTTTCTGCCAATGGAATTTACACCTTCCAGCCTTaGTCCATCATTTTCCCTGCAATTCCTGTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TLSANGIYTFQP*SIIFPAIPVSL Trigger: CAGAGAGACAGGAATTGCAGGGAAAATGATGGATCAAGGCTGGAAGGTGTAAATTCCATTGGCAGAAAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS TCA 72 bp | CAACTGACGCACATTCATGTAAAAACAGACATTCTCTaGCTGGAAAAACAGACTCCTTGTGGCAACAAGATA | + |
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Preference number: 6 (lower is better) Translates to: QLTHIHVKTDIL*LEKQTPCGNKI Trigger: TATCTTGTTGCCACAAGGAGTCTGTTTTTCCAGTCAGAGAATGTCTGTTTTTACATGAATGTGCGTCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CAA 72 bp | TTCCAACTGAAATCTGAACCTTTTGATTATTTCCGGTaGACAAGTCCAAATAAGGCGACTGCATCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FQLKSEPFDYFR*TSPNKATASLQ Trigger: TTGCAGAGATGCAGTCGCCTTATTTGGACTTGTCAACCGGAAATAATCAAAAGGTTCAGATTTCAGTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CAA 90 bp | CGGGTGTTTCTCATTCGTGAATGGCTGTTTCCTCAAATGAACTTTTaGTTAACGTACCTCAGTATAATTTTTAACAGGAGAAAGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVFLIREWLFPQMNF*LTYLSIIFNRRKWR Trigger: CCTCCACTTTCTCCTGTTAAAAATTATACTGAGGTACGTTAACAAAAAGTTCATTTGAGGAAACAGCCATTCACGAATGAGAAACACCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CCA 72 bp | AACAGACATTCTCTGACTGGAAAAACAGACTCCTTGTaGCAACAAGATACCAAATTACAAACAAGACCTAAG | + |
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Preference number: 6 (lower is better) Translates to: NRHSLTGKTDSL*QQDTKLQTRPK Trigger: CTTAGGTCTTGTTTGTAATTTGGTATCTTGTTGCCACAAGGAGTCTGTTTTTCCAGTCAGAGAATGTCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CCA 72 bp | TGGAGTACTGAGTCCATTTTTCTGGAGTCTGTGTTTTaGTCATTGCTATCTTTCTGCTTGAATAAACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WSTESIFLESVF*SLLSFCLNKLF Trigger: GAAGAGTTTATTCAAGCAGAAAGATAGCAATGACCAAAACACAGACTCCAGAAAAATGGACTCAGTACTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS GCA 72 bp | AATTTACACCTTCCAGCCTTGATCCATCATTTTCCCTaGAATTCCTGTCTCTCTGAAATGAATAAAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: NLHLPALIHHFP*NSCLSEMNKTK Trigger: TTTGGTTTTATTCATTTCAGAGAGACAGGAATTGCAGGGAAAATGATGGATCAAGGCTGGAAGGTGTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CAA 72 bp | AAAAACAGACATTCTCTGACTGGAAAAACAGACTCCTaGTGGCAACAAGATACCAAATTACAAACAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: KNRHSLTGKTDS*WQQDTKLQTRP Trigger: AGGTCTTGTTTGTAATTTGGTATCTTGTTGCCACAAGGAGTCTGTTTTTCCAGTCAGAGAATGTCTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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| CDS CAA 72 bp | CTGGAGTCTGTGTTTTGGTCATTGCTATCTTTCTGCTaGAATAAACTCTTCCAACTGAAATCTGAACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LESVFWSLLSFC*NKLFQLKSEPF Trigger: AAAAGGTTCAGATTTCAGTTGGAAGAGTTTATTCAAGCAGAAAGATAGCAATGACCAAAACACAGACTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592495.1 |
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