RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF432 (Homo sapiens)

Ensembl gene IDs: ENSG00000256087

Ensembl transcript IDs: ENST00000221315.10, ENST00000594154.5, ENST00000597273.1, ENST00000598446.1, ENST00000601310.1

Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGAAATTGCATTGTCTTCCAAGGGTGAAAATCTAGCAACAGGCTaGTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTG +
Preference number: 1 (lower is better)
Translates to: LEIALSSKGENLATG*STLPICMYARSTLL
Trigger: CAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAATGCAATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR GCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATaGATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTA +
Preference number: 1 (lower is better)
Translates to: SKGENLATGCSTLPI*MYARSTLLFNQFTL
Trigger: TAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 90 bp CATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTaGAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTA +
Preference number: 1 (lower is better)
Translates to: HSLKFAPGNCIVFQG*KSSNRLLYTAYMHV
Trigger: TACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 90 bp CTTACACATTTGTCATGTGGACGTTGTCATAGTTTTAATGAAGGTTaGCAAATGAAAGGTTACCCCCAATCCACAGACTCTCTCTCAGAT +
Preference number: 1 (lower is better)
Translates to: LTHLSCGRCHSFNEG*QMKGYPQSTDSLSD
Trigger: ATCTGAGAGAGAGTCTGTGGATTGGGGGTAACCTTTCATTTGTCAACCTTCATTAAAACTATGACAACGTCCACATGACAAATGTGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR GCA 90 bp ATGATGATGAGGCAGCATGTATCACTGAAATCCTCGTGTATTCACTaGCATCTGAAACTTGTTCTCCAGTATGAAATATATCTGCCAACT +
Preference number: 1 (lower is better)
Translates to: MMMRQHVSLKSSCIH*HLKLVLQYEIYLPT
Trigger: AGTTGGCAGATATATTTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGATACATGCTGCCTCATCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 90 bp TTGACAAATGAAAGGTTACCCCCAATCCACAGACTCTCTCTCAGATaGGTAATTTTCTATACATTGGTACATCAAAGAATTCAGAGCCTG +
Preference number: 1 (lower is better)
Translates to: LTNERLPPIHRLSLR*VIFYTLVHQRIQSL
Trigger: CAGGCTCTGAATTCTTTGATGTACCAATGTATAGAAAATTACTCATCTGAGAGAGAGTCTGTGGATTGGGGGTAACCTTTCATTTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 90 bp ATTTGTCATGTGGACGTTGTCATAGTTTTAATGAAGGTTGACAAATaGAAGGTTACCCCCAATCCACAGACTCTCTCTCAGATGAGTAAT +
Preference number: 1 (lower is better)
Translates to: ICHVDVVIVLMKVDK*KVTPNPQTLSQMSN
Trigger: ATTACTCATCTGAGAGAGAGTCTGTGGATTGGGGGTAACCTTTCATTTGTCAACCTTCATTAAAACTATGACAACGTCCACATGACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 90 bp GTGATAAGAACAGCCCGCTTTACAATTATGGAATCATTGATAATATaGTGCAAGGTATGCTGTCACAGAATAGATATCAAGTGTATCATG +
Preference number: 1 (lower is better)
Translates to: VIRTARFTIMESLII*CKVCCHRIDIKCIM
Trigger: CATGATACACTTGATATCTATTCTGTGACAGCATACCTTGCATCATATTATCAATGATTCCATAATTGTAAAGCGGGCTGTTCTTATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAAGCACTTTGGGAGGCTaGGGCGGGTGGACCGCCCGG +
Preference number: 2 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSESTLGG*GGWTAR
Trigger: CCGGGCGGTCCACCCGCCTCAGCCTCCCAAAGTGCT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGAGGCGGGGTTGCAGTaGGCCAAGATCGTGCTATTA +
Preference number: 2 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHEAGLQ*AKIVLL
Trigger: TAATAGCACGATCTTGGCTCACTGCAACCCCGCCTC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAAGCCTCCAGAGTAGCTaGGATTACAAGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: ALSQSLRTLRFHFNSILESLQSS*DYKREP
Trigger: TGGCTCACGCTTGTAATCCCAGCTACTCTGGAGGCT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR GCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTCTACACTGCCTATATaGATGTATGCTAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSTLPI*MYARST
Trigger: TGTGCTCCTAGCATACATGCATATAGGCAGTGTAGA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAGCCTGAATTCATGTTaGAGCCTTTCTGACATTGAT +
Preference number: 2 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSLNSC*SLSDID
Trigger: ATCAATGTCAGAAAGGCTTCAACATGAATTCAGGCT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAAATTGTCTTCCAAGGGTaGAAATCTAGCAACAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYEIVFQG*KSSNRL
Trigger: CAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAAT...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR GCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCAGGCTGCTCTACACTaGCTATATGCATGTATGCTA +
Preference number: 2 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCQAALH*LYACML
Trigger: TAGCATACATGCATATAGGCAGTGTAGAGCAGCCTG...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATAGTTTTAATGAAGGTTaGCAAATGAAAGGTTACCCC +
Preference number: 2 (lower is better)
Translates to: SKGENLATGCSTLPICMYSFNEG*QMKGYP
Trigger: GGGGTAACCTTTCATTTGTCAACCTTCATTAAAACT...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAGGCAGCATGTATCACTaGAATCCTCGTGTATTCACT +
Preference number: 2 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEGSMYH*NPRVFT
Trigger: AGTGAATACACGAGGATTTCAGTGATACATGCTGCC...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAGATCAGTGGCTACCATaGGTCATATTGGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEDQWLP*VILGGQ
Trigger: CTGTCCTCCCAATATGACCCATGGTAGCCACTGATC...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR GCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTATGCTAGGAGCACACTaGTGTTTAATCAGTTCACAT +
Preference number: 2 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCMLGAH*CLISSH
Trigger: ATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCAT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CCA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAACGTaGTTTTCTCTCTGCATGAAT +
Preference number: 2 (lower is better)
Translates to: CSTLPICMYARSTLLFNQFTLLT*FSLCMN
Trigger: ATTCATGCAGAGAGAAAACCACGTTAGTAATGTGAA...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAAAGCCTGAATTCATGTTaGAGCCTTTCTGACATTGAT +
Preference number: 2 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKSLNSC*SLSDID
Trigger: ATCAATGTCAGAAAGGCTTCAACATGAATTCAGGCT...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAAAGTTTTAATGAAGGTTaGCAAATGAAAGGTTACCCC +
Preference number: 2 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYESFNEG*QMKGYP
Trigger: GGGGTAACCTTTCATTTGTCAACCTTCATTAAAACT...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAGGCAGCATGTATCACTaGAATCCTCGTGTATTCACT +
Preference number: 2 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEGSMYH*NPRVFT
Trigger: AGTGAATACACGAGGATTTCAGTGATACATGCTGCC...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR GCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAAATCTAGCAACAGGCTaGTCTACACTGCCTATATGC +
Preference number: 2 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSENLATG*STLPIC
Trigger: GCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR TCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAAAAGAATTCAGAGCCTaGATTCATGTTGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEKEFRA*IHVEAF
Trigger: AAAGGCTTCAACATGAATTCAGGCTCTGAATTCTTT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR GCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAATCTACACTGCCTATATaGATGTATGCTAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSESTLPI*MYARST
Trigger: TGTGCTCCTAGCATACATGCATATAGGCAGTGTAGA...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAATTCACATTACTAACGTaGTTTTCTCTCTGCATGAAT +
Preference number: 2 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEFTLLT*FSLCMN
Trigger: ATTCATGCAGAGAGAAAACCACGTTAGTAATGTGAA...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR GCA 72 bp GCATTGTCTTCCAAGGGTGAAAATCTAGCAACAGGCTaGTCTACACTGCCTATATGCATGTATGCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: ALSSKGENLATG*STLPICMYARS
Trigger: GCTCCTAGCATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 72 bp AAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTaGAAATCTAGCAACAGGCTGCTCTACACTGCCTAT +
Preference number: 3 (lower is better)
Translates to: KFAPGNCIVFQG*KSSNRLLYTAY
Trigger: ATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR GCA 72 bp GAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATaGATGTATGCTAGGAGCACACTGCTGTTTAATCAG +
Preference number: 3 (lower is better)
Translates to: ENLATGCSTLPI*MYARSTLLFNQ
Trigger: CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGAAGCCTTTCTGACATaGATAGCATTCATCCTAGTG +
Preference number: 3 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHEAFLT*IAFILV
Trigger: CACTAGGATGAATGCTATCAATGTCAGAAAGGCTTC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGGAAGCCTTTCTGACATaGATAGCATTCATCCTAGTG +
Preference number: 3 (lower is better)
Translates to: CSTLPICMYARSTLLFNQEAFLT*IAFILV
Trigger: CACTAGGATGAATGCTATCAATGTCAGAAAGGCTTC...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGATCTTAAGGGTAATTaGCTGAGTGAACAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHDLKGN*LSEQSP
Trigger: AGGGCTTTGTTCACTCAGCAAATTACCCTTAAGATC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATATAAATAACACCAGATaGGCACAGAAAACACCTGTG +
Preference number: 3 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHINNTR*AQKTPV
Trigger: CACAGGTGTTTTCTGTGCCAATCTGGTGTTATTTAT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTATGTACCTTACACATTaGTCATGTGGACGTTGTCAT +
Preference number: 3 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCMYLTH*SCGRCH
Trigger: ATGACAACGTCCACATGACAAATGTGTAAGGTACAT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR GCA 72 bp AGGCAGCATGTATCACTGAAATCCTCGTGTATTCACTaGCATCTGAAACTTGTTCTCCAGTATGAAATATAT +
Preference number: 3 (lower is better)
Translates to: RQHVSLKSSCIH*HLKLVLQYEIY
Trigger: ATATATTTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGATACATGCTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR-3UTR CAA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAATGTACCTTACACATTaGTCATGTGGACGTTGTCAT +
Preference number: 3 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEMYLTH*SCGRCH
Trigger: ATGACAACGTCCACATGACAAATGTGTAAGGTACAT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 72 bp GTATGTGTAAGTTCATTGATGATCTATTATGATCACTaGAGAGATAGGGTCTTTCTTCCCATAGAAGGCTTT +
Preference number: 3 (lower is better)
Translates to: VCVSSLMIYYDH*RDRVFLPIEGF
Trigger: AAAGCCTTCTATGGGAAGAAAGACCCTATCTCTTCAGTGATCATAATAGATCATCAATGAACTTACACATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR TCA 72 bp TTTTCTATACATTGGTACATCAAAGAATTCAGAGCCTaGATTCATGTTGAAGCCTTTCTGACATTGATAGCA +
Preference number: 3 (lower is better)
Translates to: FSIHWYIKEFRA*IHVEAFLTLIA
Trigger: TGCTATCAATGTCAGAAAGGCTTCAACATGAATTCAGGCTCTGAATTCTTTGATGTACCAATGTATAGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAGCACTTTGGGAGGCTaGGGCGGGTGGACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSTLGG*GGWTAR
Trigger: CCGGGCGGTCCACCCGCCTCAGCCTCCCAAAGTGCT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAAGCACTTTGGGAGGCTaGGGCGGGTGGACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILESTLGG*GGWTAR
Trigger: CCGGGCGGTCCACCCGCCTCAGCCTCCCAAAGTGCT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAACTTCTTCCACTTCTaGGCCCCTCGCCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHNFFHF*APRPTP
Trigger: GGGAGTTGGGCGAGGGGCCCAGAAGTGGAAGAAGTT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221315.10
CDS-3UTR TCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATCGGTACAAATCCTTCTaGAAAGGGCCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYRYKSF*KGPRSC
Trigger: GCAGCTCCTGGGCCCTTTTCAGAAGGATTTGTACCG...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATCCTCCCAGGTTCAAGTaGTTCTCCAGCTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHPPRFK*FSSLAS
Trigger: GGAGGCTAAGCTGGAGAATCACTTGAACCTGGGAGG...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TGTGGAGGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCTCATTCTGTTGTGGGAAATaGCCAGCACCTGGGATACTC +
Preference number: 4 (lower is better)
Translates to: CGGKTIPIPNVGTASVSSFCCGK*PAPGIL
Trigger: GAGTATCCCAGGTGCTGGCCATTTCCCACAACAGAA...TGAGGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR TCA 90 bp TCTTGTGGAGGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCAACTTCAGTCACCAGTaGAGGGTGTCCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: SCGGKTIPIPNVGTASVSNFSHQ*RVSTEI
Trigger: GATTTCTGTGGACACCCTTCACTGGTGACTGAAGTT...GGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCCTCCACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR GCA 90 bp GGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCTCAGACACCACTTACGCATCTTGCTaGTTCTCACATACCTGGACA +
Preference number: 4 (lower is better)
Translates to: GKTIPIPNVGTASVSSDTTYASC*FSHTWT
Trigger: TGTCCAGGTATGTGAGAAGCAGCAAGATGCGTAAGT...GGTGTCTGAGGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATAGCCTCCAGAGTAGCTaGGATTACAAGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYSLQSS*DYKREP
Trigger: TGGCTCACGCTTGTAATCCCAGCTACTCTGGAGGCT...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTAGTCGAGCGTGGTCGTaGGTGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCSRAWS*VPVIPA
Trigger: AGCTGGGATTACAGGCACCCACGACCACGCTCGACT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGGTAGCCAGGACCTGTaGACAGGGACTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLGSQDL*TGTPTS
Trigger: GCTGGTAGGAGTCCCTGTCCACAGGTCCTGGCTACC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594154.5
CDS-3UTR TCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCGGTACAAATCCTTCTaGAAAGGGCCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCRYKSF*KGPRSC
Trigger: GCAGCTCCTGGGCCCTTTTCAGAAGGATTTGTACCG...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CTCAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTCGGTACAAATCCTTCTaGAAAGGGCCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRHPQSLLSLTIILLTHLRYKSF*KGPRSC
Trigger: GCAGCTCCTGGGCCCTTTTCAGAAGGATTTGTACCG...AAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR GCA 90 bp TGTGGAGGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCTCAGGACAGATTCGACTGTaGCTTTCATCTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: CGGKTIPIPNVGTASVSSGQIRL*LSSSIV
Trigger: GACAATGGAAGATGAAAGGCACAGTCGAATCTGTCC...TGAGGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTTCTGTTGTGGGAAATaGCCAGCACCTGGGATACTC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHFCCGK*PAPGIL
Trigger: GAGTATCCCAGGTGCTGGCCATTTCCCACAACAGAA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGATCAGTGGCTACCATaGGTCATATTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYDQWLP*VILGGQ
Trigger: CTGTCCTCCCAATATGACCCATGGTAGCCACTGATC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGATCAGTGGCTACCATaGGTCATATTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHDQWLP*VILGGQ
Trigger: CTGTCCTCCCAATATGACCCATGGTAGCCACTGATC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAACTTCAGTCACCAGTaGAGGGTGTCCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHNFSHQ*RVSTEI
Trigger: GATTTCTGTGGACACCCTTCACTGGTGACTGAAGTT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATAACTTCAGTCACCAGTaGAGGGTGTCCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYNFSHQ*RVSTEI
Trigger: GATTTCTGTGGACACCCTTCACTGGTGACTGAAGTT...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTACCTCCCAGGTTCAAGTaGTTCTCCAGCTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLPPRFK*FSSLAS
Trigger: GGAGGCTAAGCTGGAGAATCACTTGAACCTGGGAGG...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGAGGCGGGGTTGCAGTaGGCCAAGATCGTGCTATTA +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLEAGLQ*AKIVLL
Trigger: TAATAGCACGATCTTGGCTCACTGCAACCCCGCCTC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAGAGGCGGGGTTGCAGTaGGCCAAGATCGTGCTATTA +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEEAGLQ*AKIVLL
Trigger: TAATAGCACGATCTTGGCTCACTGCAACCCCGCCTC...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CTCAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTTGGACTGACTCTCCTTaGAATCGCCGCGACCTCTTA +
Preference number: 4 (lower is better)
Translates to: LRHPQSLLSLTIILLTHLWTDSP*NRRDLL
Trigger: TAAGAGGTCGCGGCGATTCCAAGGAGAGTCAGTCCA...AAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp CTCAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGGTAGCCAGGACCTGTaGACTGACTCTCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LRHPQSLLSLTIILLTHLGSQDL*TDSPWN
Trigger: ATTCCAAGGAGAGTCAGTCCACAGGTCCTGGCTACC...AAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGAAATGGCCAGCACCTaGGATACTCTGTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYEMAST*DTLSLS
Trigger: AGACAAAGACAGAGTATCCCAGGTGCTGGCCATTTC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTGCAATGGCGCAATCTTaGCTCACTGAAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCAMAQS*LTETSA
Trigger: GGCAGAGGTTTCAGTGAGCCAAGATTGCGCCATTGC...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGTCCGCTATTCACAATaGAACCTTTCCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHVRYSQ*NLSHIH
Trigger: GTGAATGTGGGAAAGGTTTCATTGTGAATAGCGGAC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGGTCCGCTATTCACAATaGAACCTTTCCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: CSTLPICMYARSTLLFNQVRYSQ*NLSHIH
Trigger: GTGAATGTGGGAAAGGTTTCATTGTGAATAGCGGAC...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGGGCAGCATGTATCACTaGAATCCTCGTGTATTCACT +
Preference number: 4 (lower is better)
Translates to: CSTLPICMYARSTLLFNQGSMYH*NPRVFT
Trigger: AGTGAATACACGAGGATTTCAGTGATACATGCTGCC...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGGGACAGATTCGACTGTaGCTTTCATCTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: CSTLPICMYARSTLLFNQGQIRL*LSSSIV
Trigger: GACAATGGAAGATGAAAGGCACAGTCGAATCTGTCC...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATCAGGCTGCTCTACACTaGCTATATGCATGTATGCTA +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYQAALH*LYACML
Trigger: TAGCATACATGCATATAGGCAGTGTAGAGCAGCCTG...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAATCTAGCAACAGGCTaGTCTACACTGCCTATATGC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHNLATG*STLPIC
Trigger: GCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTATGGACTGACTCTCCTTaGAATCGCCGCGACCTCTTA +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLWTDSP*NRRDLL
Trigger: TAAGAGGTCGCGGCGATTCCAAGGAGAGTCAGTCCA...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221315.10
CDS-3UTR CCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGGTAGCCAGGACCTGTaGACTGACTCTCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLGSQDL*TDSPWN
Trigger: ATTCCAAGGAGAGTCAGTCCACAGGTCCTGGCTACC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221315.10
CDS-3UTR CCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAAGCCTCCAGAGTAGCTaGGATTACAAGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLSLQSS*DYKREP
Trigger: TGGCTCACGCTTGTAATCCCAGCTACTCTGGAGGCT...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAAGTCGAGCGTGGTCGTaGGTGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSESRAWS*VPVIPA
Trigger: AGCTGGGATTACAGGCACCCACGACCACGCTCGACT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTCCATCAACAGTGAATaGATACACAAACCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSINSE*IHKPWC
Trigger: GCACCAGGGTTTGTGTATCCATTCACTGTTGATGGA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGCATGAACATGTCCACTaGATTGTCAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSTLPICMYARSTLLFNQHEHVH*IVRVCF
Trigger: GAAACAAACCCTGACAATGCAGTGGACATGTTCATG...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTCCTCGTGTATTCACTaGCATCTGAAACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSSCIH*HLKLVL
Trigger: GAGAACAAGTTTCAGATGGCAGTGAATACACGAGGA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TGTGGAGGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCTCAATCATATCTAGGTCCTaGAATCTTCCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CGGKTIPIPNVGTASVSSIISRS*NLPLSS
Trigger: TGAAGAAAGAGGAAGATTCCAGGACCTAGATATGAT...TGAGGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCCTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp AGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGCTGAAATGGCCAGCACCTaGGATACTCTGTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RHPQSLLSLTIILLTHLAEMAST*DTLSLS
Trigger: AGACAAAGACAGAGTATCCCAGGTGCTGGCCATTTC...AGCAAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAATTCTGTTGTGGGAAATaGCCAGCACCTGGGATACTC +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEFCCGK*PAPGIL
Trigger: GAGTATCCCAGGTGCTGGCCATTTCCCACAACAGAA...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATTTAGCCTGGACTTTCTaGAGAACACTTTTGCACACA +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYLAWTF*RTLLHT
Trigger: TGTGTGCAAAAGTGTTCTCCAGAAAGTCCAGGCTAA...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATTACCATGGGTCATATTaGGAGGACAGTGTGAGTATA +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYYHGSY*EDSVSI
Trigger: TATACTCACACTGTCCTCCCAATATGACCCATGGTA...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp AGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGCTTGCTTCTCACATACCTaGACAGATTCGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RHPQSLLSLTIILLTHLACFSHT*TDSTVP
Trigger: AGGCACAGTCGAATCTGTCCAGGTATGTGAGAAGCA...AGCAAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATCGACCTCTTAAAAGCTaGACTTACTTCCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHRPLKS*TYFPKL
Trigger: AAGTTTAGGGAAGTAAGTTCAGCTTTTAAGAGGTCG...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221315.10
CDS-3UTR TCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTATTGTCTTCCAAGGGTaGAAATCTAGCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCIVFQG*KSSNRL
Trigger: CAGCCTGTTGCTAGATTTTCACCCTTGGAAGACAAT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAGAAATGGCCAGCACCTaGGATACTCTGTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEEMAST*DTLSLS
Trigger: AGACAAAGACAGAGTATCCCAGGTGCTGGCCATTTC...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATAGTGTCAGCAATTCCTaGGCATTGATCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYSVSNS*ALIIFF
Trigger: GAAGAAAATGATCAATGCCCAGGAATTGCTGACACT...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAGCAATGGCGCAATCTTaGCTCACTGAAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEAMAQS*LTETSA
Trigger: GGCAGAGGTTTCAGTGAGCCAAGATTGCGCCATTGC...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAATCCATCAACAGTGAATaGATACACAAACCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYESINSE*IHKPWC
Trigger: GCACCAGGGTTTGTGTATCCATTCACTGTTGATGGA...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGCCGACCTCTTAAAAGCTaGACTTACTTCCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: QTPTEPSFTDYNITYASCRPLKS*TYFPKL
Trigger: AAGTTTAGGGAAGTAAGTTCAGCTTTTAAGAGGTCG...GCAAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAAAGAATTCAGAGCCTaGATTCATGTTGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHKEFRA*IHVEAF
Trigger: AAAGGCTTCAACATGAATTCAGGCTCTGAATTCTTT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGGCAGCATGTATCACTaGAATCCTCGTGTATTCACT +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLGSMYH*NPRVFT
Trigger: AGTGAATACACGAGGATTTCAGTGATACATGCTGCC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGAATCATTGATAATATaGTGCAAGGTATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SKGENLATGCSTLPICMYESLII*CKVCCH
Trigger: GTGACAGCATACCTTGCATCATATTATCAATGATTC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATGAATCATTGATAATATaGTGCAAGGTATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHESLII*CKVCCH
Trigger: GTGACAGCATACCTTGCATCATATTATCAATGATTC...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGGACAGATTCGACTGTaGCTTTCATCTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLGQIRL*LSSSIV
Trigger: GACAATGGAAGATGAAAGGCACAGTCGAATCTGTCC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTCTGGAGAACACTTTTaGACACAAAGTACATCCATA +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHSGEHF*TQSTSI
Trigger: TATGGATGTACTTTGTGTGCAAAAGTGTTCTCCAGA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCATGAACATGTCCACTaGATTGTCAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCHEHVH*IVRVCF
Trigger: GAAACAAACCCTGACAATGCAGTGGACATGTTCATG...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTACAGGCTGCTCTACACTaGCTATATGCATGTATGCTA +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLQAALH*LYACML
Trigger: TAGCATACATGCATATAGGCAGTGTAGAGCAGCCTG...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAAATCTAGCAACAGGCTaGTCTACACTGCCTATATGC +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLNLATG*STLPIC
Trigger: GCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATT...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAATCCTCGTGTATTCACTaGCATCTGAAACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYESSCIH*HLKLVL
Trigger: GAGAACAAGTTTCAGATGGCAGTGAATACACGAGGA...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATATCATATCTAGGTCCTaGAATCTTCCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHIISRS*NLPLSS
Trigger: TGAAGAAAGAGGAAGATTCCAGGACCTAGATATGAT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGCAGTGTCAGCAATTCCTaGGCATTGATCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTPTEPSFTDYNITYASCSVSNS*ALIIFF
Trigger: GAAGAAAATGATCAATGCCCAGGAATTGCTGACACT...GCAAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAAAACTTCGTTGTTTTCTaGACAGATTCGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYENFVVF*TDSTVP
Trigger: AGGCACAGTCGAATCTGTCCAGAAAACAACGAAGTT...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAATTAGCCTGGACTTTCTaGAGAACACTTTTGCACACA +
Preference number: 4 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYELAWTF*RTLLHT
Trigger: TGTGTGCAAAAGTGTTCTCCAGAAAGTCCAGGCTAA...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAACAAAGGCTTTTGGTTTaGGAGGCAGTATTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYEQRLLV*EAVFPN
Trigger: ATTTGGAAATACTGCCTCTCAAACCAAAAGCCTTTG...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTAGCCTGAATTCATGTTaGAGCCTTTCTGACATTGAT +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCSLNSC*SLSDID
Trigger: ATCAATGTCAGAAAGGCTTCAACATGAATTCAGGCT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAATCTACACTGCCTATATaGATGTATGCTAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILESTLPI*MYARST
Trigger: TGTGCTCCTAGCATACATGCATATAGGCAGTGTAGA...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTAGTGTCAGCAATTCCTaGGCATTGATCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCSVSNS*ALIIFF
Trigger: GAAGAAAATGATCAATGCCCAGGAATTGCTGACACT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAAAACTTCGTTGTTTTCTaGACAGATTCGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKNFVVF*TDSTVP
Trigger: AGGCACAGTCGAATCTGTCCAGAAAACAACGAAGTT...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTATACCATGGGTCATATTaGGAGGACAGTGTGAGTATA +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLYHGSY*EDSVSI
Trigger: TATACTCACACTGTCCTCCCAATATGACCCATGGTA...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTACAAAGGCTTTTGGTTTaGGAGGCAGTATTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLQRLLV*EAVFPN
Trigger: ATTTGGAAATACTGCCTCTCAAACCAAAAGCCTTTG...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTTCTGGAGAACACTTTTaGACACAAAGTACATCCATA +
Preference number: 4 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCSGEHF*TQSTSI
Trigger: TATGGATGTACTTTGTGTGCAAAAGTGTTCTCCAGA...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAATGCTAGGAGCACACTaGTGTTTAATCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLMLGAH*CLISSH
Trigger: ATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCAT...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAATGCTAGGAGCACACTaGTGTTTAATCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEMLGAH*CLISSH
Trigger: ATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCAT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR TCA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAAAAGAATTCAGAGCCTaGATTCATGTTGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: PICMYARSTLLFNQFTLLKEFRA*IHVEAF
Trigger: AAAGGCTTCAACATGAATTCAGGCTCTGAATTCTTT...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
3UTR CAA 72 bp CAGATTCTCTGCAAAAGGACTATGTACCTTACACATTaGTCATGTGGACGTTGTCATAGTTTTAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: QILCKRTMYLTH*SCGRCHSFNEG
Trigger: ACCTTCATTAAAACTATGACAACGTCCACATGACAAATGTGTAAGGTACATAGTCCTTTTGCAGAGAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAAATACACAAACCCTGGTaGATCCATTTAAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKIHKPW*IHLKEY
Trigger: GTATTCTTTTAAATGGATGCACCAGGGTTTGTGTAT...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAATTAAAATTCGCTCCTaGAAATTGCATTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALSQSLRTLRFHFNSILEIKIRS*KLHCLP
Trigger: TGGAAGACAATGCAATTTCCAGGAGCGAATTTTAAT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAAATTAAAATTCGCTCCTaGAAATTGCATTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKIKIRS*KLHCLP
Trigger: TGGAAGACAATGCAATTTCCAGGAGCGAATTTTAAT...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAATCATATCTAGGTCCTaGAATCTTCCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEIISRS*NLPLSS
Trigger: TGAAGAAAGAGGAAGATTCCAGGACCTAGATATGAT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR GCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAAATACACAAACCCTGGTaGATCCATTTAAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEIHKPW*IHLKEY
Trigger: GTATTCTTTTAAATGGATGCACCAGGGTTTGTGTAT...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CCA 90 bp CTATTTAGACACCTAACAACTTGGATAGATCTTAAGGGTAATTTGCTGAGTGAATTCACATTACTAACGTaGTTTTCTCTCTGCATGAAT +
Preference number: 4 (lower is better)
Translates to: LFRHLTTWIDLKGNLLSEFTLLT*FSLCMN
Trigger: ATTCATGCAGAGAGAAAACCACGTTAGTAATGTGAA...TTCACTCAGCAAATTACCCTTAAGATCTATCCAAGTTGTTAGGTGTCTAAATAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS TCA 90 bp CAGACACCTCAGCCCTGGCAGAAAATGGAGAGCTTATCAGAGGCTTaGGTTCACACAGGCAGACACGGCGTGGGGGTAAAGTCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: QTPQPWQKMESLSEA*VHTGRHGVGVKSSE
Trigger: TTCAGAGGACTTTACCCCCACGCCGTGTCTGCCTGTGTGAACTCAAGCCTCTGATAAGCTCTCCATTTTCTGCCAGGGCTGAGGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS-3UTR CAA 90 bp TCTTGTGGAGGGAAAACGATTCCCATTCCTAATGTAGGCACTGCTTCTGTGTCCGCCTTTCATCTTCCATaGTCCATGGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SCGGKTIPIPNVGTASVSAFHLP*SMVLLL
Trigger: GAGGAGAAGAACCATGGACAATGGAAGATGAAAGGC...GGACACAGAAGCAGTGCCTACATTAGGAATGGGAATCGTTTTCCCTCCACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS-3UTR CAA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGCAAGCTCTGTTTCCTaGGCAAAGCCTCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: SKGENLATGCSTLPICMYASSVS*AKPLPH
Trigger: ATGTGGAAGAGGCTTTGCCAAGGAAACAGAGCTTGC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS CCA 90 bp GCATCCCTTCTTAGCGGTTATGATGGCTGTGACGTCTCAGCTCAATaGAAAATTAAAGTCACCTCTGGGCACCTCAGTCACTATTGTAAA +
Preference number: 5 (lower is better)
Translates to: ASLLSGYDGCDVSAQ*KIKVTSGHLSHYCK
Trigger: TTTACAATAGTGACTGAGGTGCCCAGAGGTGACTTTAATTTTCCATTGAGCTGAGACGTCACAGCCATCATAACCGCTAAGAAGGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS-3UTR CAA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGCCTTTCATCTTCCATaGTCCATGGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SKGENLATGCSTLPICMYAFHLP*SMVLLL
Trigger: GAGGAGAAGAACCATGGACAATGGAAGATGAAAGGC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTGCCTTTCATCTTCCATaGTCCATGGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCAFHLP*SMVLLL
Trigger: GAGGAGAAGAACCATGGACAATGGAAGATGAAAGGC...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATACTCTTCAGCATCCTTaGATTTTCCAAGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHTLQHP*IFQVIL
Trigger: CAGGATCACTTGGAAAATCAAAGGATGCTGAAGAGT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTAGCAAGCTCTGTTTCCTaGGCAAAGCCTCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: PICMYARSTLLFNQFTLLASSVS*AKPLPH
Trigger: ATGTGGAAGAGGCTTTGCCAAGGAAACAGAGCTTGC...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATAACATGTCCACTGCATaGTCAGGGTTTGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHNMSTA*SGFVSI
Trigger: AATGGAAACAAACCCTGACAATGCAGTGGACATGTT...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TGCTCTACACTGCCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGAACATGTCCACTGCATaGTCAGGGTTTGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: CSTLPICMYARSTLLFNQNMSTA*SGFVSI
Trigger: AATGGAAACAAACCCTGACAATGCAGTGGACATGTT...CTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGGCAGTGTAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATGATCTTAAGGGTAATTaGCTGAGTGAACAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: SKGENLATGCSTLPICMYDLKGN*LSEQSP
Trigger: AGGGCTTTGTTCACTCAGCAAATTACCCTTAAGATC...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCCAAGGGTGAAAATCTAGCAACAGGCTGCTCTACACTGCCTATATGCATGTATACAAAGGCTTTTGGTTaGAGAGGCAGTATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SKGENLATGCSTLPICMYTKAFG*RGSISK
Trigger: TTTGGAAATACTGCCTCTCAAACCAAAAGCCTTTGT...ATACATGCATATAGGCAGTGTAGAGCAGCCTGTTGCTAGATTTTCACCCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAACTGATGCTTACTGACTaGGGATTTAGTGCTATTGGC +
Preference number: 5 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYELMLTD*GFSAIG
Trigger: GCCAATAGCACTAAATCCCAAGTCAGTAAGCATCAG...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp ACAACCCAAATGTCCATCAACAGTGAATGGATACACAAACCCTGGTGCATCCATTTCTGGAGAACACTTTaGCACACAAAGTACATCCAT +
Preference number: 5 (lower is better)
Translates to: TTQMSINSEWIHKPWCIHFWRTL*HTKYIH
Trigger: ATGGATGTACTTTGTGTGCAAAAGTGTTCTCCAGAA...ATGGATGCACCAGGGTTTGTGTATCCATTCACTGTTGATGGACATTTGGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp CAGACACCCACAGAGCCTTCTTTCACTGACTATAATATTACTTACGCATCTTGCTATTACTTACGCATCTaGCTGCTTCTCACATACCTG +
Preference number: 5 (lower is better)
Translates to: QTPTEPSFTDYNITYASCYYLRI*LLLTYL
Trigger: CAGGTATGTGAGAAGCAGCAAGATGCGTAAGTAATA...GCAAGATGCGTAAGTAATATTATAGTCAGTGAAAGAAGGCTCTGTGGGTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1
CDS TCA 90 bp GAGCAAAACAACTTTCAGGGGTACATTCACCTTAACACGTGGCCCTaGATATTTGTCTCTTTATTTGGTTCTCTCAAACCAAGGAAACAC +
Preference number: 5 (lower is better)
Translates to: EQNNFQGYIHLNTWP*IFVSLFGSLKPRKH
Trigger: GTGTTTCCTTGGTTTGAGAGAACCAAATAAAGAGACAAATATTCAGGGCCACGTGTTAAGGTGAATGTACCCCTGAAAGTTGTTTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601310.1
CDS-3UTR CAA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAACTGATGCTTACTGACTaGGGATTTAGTGCTATTGGC +
Preference number: 5 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKLMLTD*GFSAIG
Trigger: GCCAATAGCACTAAATCCCAAGTCAGTAAGCATCAG...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAAGAAGCCTTTCTGACATaGATAGCATTCATCCTAGTG +
Preference number: 5 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYEEAFLT*IAFILV
Trigger: CACTAGGATGAATGCTATCAATGTCAGAAAGGCTTC...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTGATCTTAAGGGTAATTaGCTGAGTGAACAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCDLKGN*LSEQSP
Trigger: AGGGCTTTGTTCACTCAGCAAATTACCCTTAAGATC...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTCTTCCAAGGGTGAAAACTCTTCAGCATCCTTaGATTTTCCAAGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: SAFIKIRSWKLHCLPRVKTLQHP*IFQVIL
Trigger: CAGGATCACTTGGAAAATCAAAGGATGCTGAAGAGT...TTTCACCCTTGGAAGACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp TCACTGAAATCCTCGTGTATTCACTGCCATCTGAAACTTGTTCTCCAGTATGAATTCTGGAGAACACTTTaGCACACAAAGTACATCCAT +
Preference number: 5 (lower is better)
Translates to: SLKSSCIHCHLKLVLQYEFWRTL*HTKYIH
Trigger: ATGGATGTACTTTGTGTGCAAAAGTGTTCTCCAGAA...TTCATACTGGAGAACAAGTTTCAGATGGCAGTGAATACACGAGGATTTCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTTGGTGTACAACAAGATaGCTCTTAAAGGCAAAACCT +
Preference number: 5 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCWCTTR*LLKAKP
Trigger: AGGTTTTGCCTTTAAGAGCAATCTTGTTGTACACCA...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp GGCACTAGTGCATTCTCTGCATTCATTAAAATTCGCTCCTGGAAATTGCATTGTATAAATAACACCAGATaGGCACAGAAAACACCTGTG +
Preference number: 5 (lower is better)
Translates to: GTSAFSAFIKIRSWKLHCINNTR*AQKTPV
Trigger: CACAGGTGTTTTCTGTGCCAATCTGGTGTTATTTAT...ACAATGCAATTTCCAGGAGCGAATTTTAATGAATGCAGAGAATGCACTAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp GCCCTATCTCAAAGCTTGCGTACCTTACGATTCCATTTTAATAGCATTCTTGAAACAAAGGCTTTTGGTTaGAGAGGCAGTATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ALSQSLRTLRFHFNSILETKAFG*RGSISK
Trigger: TTTGGAAATACTGCCTCTCAAACCAAAAGCCTTTGT...TTCAAGAATGCTATTAAAATGGAATCGTAAGGTACGCAAGCTTTGAGATAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS-3UTR CAA 90 bp CCTATATGCATGTATGCTAGGAGCACACTGCTGTTTAATCAGTTCACATTACTATGGTGTACAACAAGATaGCTCTTAAAGGCAAAACCT +
Preference number: 5 (lower is better)
Translates to: PICMYARSTLLFNQFTLLWCTTR*LLKAKP
Trigger: AGGTTTTGCCTTTAAGAGCAATCTTGTTGTACACCA...TAGTAATGTGAACTGATTAAACAGCAGTGTGCTCCTAGCATACATGCATATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS TCA 72 bp GACGTTCGGTGTCCGTACGGCAGAACATATTCTCTCTaGGAAGCTTGCGGTGGAACTGGCCCATGGAAATGT +
Preference number: 6 (lower is better)
Translates to: DVRCPYGRTYSL*EACGGTGPWKC
Trigger: ACATTTCCATGGGCCAGTTCCACCGCAAGCTTCTCAGAGAGAATATGTTCTGCCGTACGGACACCGAACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS CAA 90 bp GGACGTTCGGTGTCCGTACGGCAGAACATATTCTCTCTGAGAAGCTaGCGGTGGAACTGGCCCATGGAAATGTCTTTAGAAGAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: GRSVSVRQNIFSLRS*RWNWPMEMSLEEKN
Trigger: GTTCTTCTCTTCTAAAGACATTTCCATGGGCCAGTTCCACCGCAAGCTTCTCAGAGAGAATATGTTCTGCCGTACGGACACCGAACGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS CCA 72 bp CTTAGCGGTTATGATGGCTGTGACGTCTCAGCTCAATaGAAAATTAAAGTCACCTCTGGGCACCTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: LSGYDGCDVSAQ*KIKVTSGHLSH
Trigger: GTGACTGAGGTGCCCAGAGGTGACTTTAATTTTCCATTGAGCTGAGACGTCACAGCCATCATAACCGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS CAA 72 bp GTGTCCGTACGGCAGAACATATTCTCTCTGAGAAGCTaGCGGTGGAACTGGCCCATGGAAATGTCTTTAGAA +
Preference number: 6 (lower is better)
Translates to: VSVRQNIFSLRS*RWNWPMEMSLE
Trigger: TTCTAAAGACATTTCCATGGGCCAGTTCCACCGCAAGCTTCTCAGAGAGAATATGTTCTGCCGTACGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS CCA 72 bp CAGAACATATTCTCTCTGAGAAGCTTGCGGTGGAACTaGCCCATGGAAATGTCTTTAGAAGAGAAGAACCAC +
Preference number: 6 (lower is better)
Translates to: QNIFSLRSLRWN*PMEMSLEEKNH
Trigger: GTGGTTCTTCTCTTCTAAAGACATTTCCATGGGCCAGTTCCACCGCAAGCTTCTCAGAGAGAATATGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598446.1
CDS GCA 72 bp GGCAGATTTTCTTCCCAAAGGCATGAACATGTCCACTaGATTGTCAGGGTTTGTTTCCATTATGAGTTCGCT +
Preference number: 6 (lower is better)
Translates to: GRFSSQRHEHVH*IVRVCFHYEFA
Trigger: AGCGAACTCATAATGGAAACAAACCCTGACAATGCAGTGGACATGTTCATGCCTTTGGGAAGAAAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221315.10
ENST00000594154.5
CDS CAA 90 bp ACAACTTTCAGGGGTACATTCACCTTAACACGTGGCCCTGAATATTaGTCTCTTTATTTGGTTCTCTCAAACCAAGGAAACACAAGACCC +
Preference number: 6 (lower is better)
Translates to: TTFRGTFTLTRGPEY*SLYLVLSNQGNTRP
Trigger: GGGTCTTGTGTTTCCTTGGTTTGAGAGAACCAAATAAAGAGACAAATATTCAGGGCCACGTGTTAAGGTGAATGTACCCCTGAAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601310.1
CDS CCA 72 bp AATATTACTTACGCATCTTGCTGCTTCTCACATACCTaGACAGATTCGACTGTGCCTTTCATCTTCCATTGT +
Preference number: 6 (lower is better)
Translates to: NITYASCCFSHT*TDSTVPFIFHC
Trigger: ACAATGGAAGATGAAAGGCACAGTCGAATCTGTCCAGGTATGTGAGAAGCAGCAAGATGCGTAAGTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597273.1