Pregenerated sensors for ZNF43 (Homo sapiens)
Ensembl gene IDs: ENSG00000198521Ensembl transcript IDs: ENST00000593551.1, ENST00000593886.1, ENST00000594012.5, ENST00000594312.1, ENST00000595461.5, ENST00000598288.5, ENST00000598381.5, ENST00000599414.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAATGCCCTCTGCGACAGCACCAAGGCAAGAGTATAGGGTCACATaGTCTACATGCTGGGTCCAGCGATATGTCACAATCCCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TMPSATAPRQEYRVT*STCWVQRYVTIPSV Trigger: CACAGATGGGATTGTGACATATCGCTGGACCCAGCATGTAGATCATGTGACCCTATACTCTTGCCTTGGTGCTGTCGCAGAGGGCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000594012.5 ENST00000595461.5 ENST00000598381.5 |
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| CDS CCA 90 bp | TTTTCACTGTTGGCTGGGTTTGCATACGAGTGTCACAATGTCACCTaGGTGCTAGGCCCTGTTATAGAACTCTCTATACTACCTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FSLLAGFAYECHNVT*VLGPVIELSILPEG Trigger: GCCCTCAGGTAGTATAGAGAGTTCTATAACAGGGCCTAGCACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 90 bp | AGTGAGCTGTGTTCATGTGGAAAGTTGTCAATTTTCACTGTTGGCTaGGTTTGCATACGAGTGTCACAATGTCACCTGGGTGCTAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SELCSCGKLSIFTVG*VCIRVSQCHLGARP Trigger: GGGCCTAGCACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACACAGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 90 bp | CATTATATGGATGATGGGTTCACAAATATGTCACTATGCCCACTATaGGCAGGGTTCAGGCAGGAGGCTCACATTACCTTAGTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: HYMDDGFTNMSLCPL*AGFRQEAHITLVLG Trigger: GCCCAGAACTAAGGTAATGTGAGCCTCCTGCCTGAACCCTGCCCATAGTGGGCATAGTGACATATTTGTGAACCCATCATCCATATAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 90 bp | CTGTGTTCATGTGGAAAGTTGTCAATTTTCACTGTTGGCTGGGTTTaGATACGAGTGTCACAATGTCACCTGGGTGCTAGGCCCTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LCSCGKLSIFTVGWV*IRVSQCHLGARPCY Trigger: ATAACAGGGCCTAGCACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 90 bp | AAGGAAAGTTACATCACCTGGATGTTGCACATAGCAATGTCACAATaGCCCATGAAGATAGGGCACAGGCAGAAGAGTCACATAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: KESYITWMLHIAMSQ*PMKIGHRQKSHITR Trigger: CCTGGTTATGTGACTCTTCTGCCTGTGCCCTATCTTCATGGGCCATTGTGACATTGCTATGTGCAACATCCAGGTGATGTAACTTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 90 bp | GACTTTACCTGTTTCTCTAAGTCTAGCTACCAGCACCAGTATCTCTaGTATGGACTGGTTTGTGGTATGAGTATCATCATCGCAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: DFTCFSKSSYQHQYL*YGLVCGMSIIIATV Trigger: CACAGTTGCGATGATGATACTCATACCACAAACCAGTCCATAGCAGAGATACTGGTGCTGGTAGCTAGACTTAGAGAAACAGGTAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 90 bp | AGAAAGTCACATTATATGGATGATGGGTTCACAAATATGTCACTATaGCCACTATGGGCAGGGTTCAGGCAGGAGGCTCACATTACCTTA | + |
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Preference number: 5 (lower is better) Translates to: RKSHYMDDGFTNMSL*PLWAGFRQEAHITL Trigger: TAAGGTAATGTGAGCCTCCTGCCTGAACCCTGCCCATAGTGGGCATAGTGACATATTTGTGAACCCATCATCCATATAATGTGACTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 90 bp | TCACAATTTTTCAGGACAAGGACCAGGCAGGAGAGTCATATTACCTaGTTGCCTGTCCAGGGTTATGTTACAATTCCTTCTCGAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SQFFRTRTRQESHIT*LPVQGYVTIPSRKQ Trigger: TTGCTTTCGAGAAGGAATTGTAACATAACCCTGGACAGGCAACCAGGTAATATGACTCTCCTGCCTGGTCCTTGTCCTGAAAAATTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 90 bp | TTCTGTAAGCAGCAACCTGGTAGAAAGAGAGTCACATTACTTGGGTaGTGGATGCAGATAGATTATAATGCTTCCTGCAAGCAGGATCCA | + |
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Preference number: 5 (lower is better) Translates to: FCKQQPGRKRVTLLG*WMQIDYNASCKQDP Trigger: TGGATCCTGCTTGCAGGAAGCATTATAATCTATCTGCATCCATCACCCAAGTAATGTGACTCTCTTTCTACCAGGTTGCTGCTTACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593551.1 ENST00000593886.1 |
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| CDS GCA 90 bp | GGAGGCTCACATTACCTTAGTTCTGGGCCAAACAATATGTCACAATaGCTGATGAGGAAAGTGCTGAGGAAAAACGTAACTTCATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: GGSHYLSSGPNNMSQ*LMRKVLRKNVTSFL Trigger: CAAAAATGAAGTTACGTTTTTCCTCAGCACTTTCCTCATCAGGCATTGTGACATATTGTTTGGCCCAGAACTAAGGTAATGTGAGCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 90 bp | AAATGTCAATGGTCCCTTAGTTCTGGGCCAAACAATATGTCACAATaGCTGATGAGGAAAGTGCTGAGGAAAAACGTAACTTCATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCQWSLSSGPNNMSQ*LMRKVLRKNVTSFL Trigger: CAAAAATGAAGTTACGTTTTTCCTCAGCACTTTCCTCATCAGGCATTGTGACATATTGTTTGGCCCAGAACTAAGGGACCATTGACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593551.1 |
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| CDS CCA 90 bp | TTTTATGGGAGCATGGCCATAGCAGGAAAGAAGGGTCAAATTATTTaGTTTCTGGGCTCAAATATATGTCACAATCTCTCCTATAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: FYGSMAIAGKKGQII*FLGSNICHNLSYRE Trigger: TTCCCTATAGGAGAGATTGTGACATATATTTGAGCCCAGAAACCAAATAATTTGACCCTTCTTTCCTGCTATGGCCATGCTCCCATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 72 bp | CGGTGGACTGGATACATCCATGAGAGCCTCAATCTTTaGCGTGGACTGTGTCCCCTTAGTGGAGTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RWTGYIHESLNL*RGLCPLSGVTA Trigger: GGCTGTGACTCCACTAAGGGGACACAGTCCACGGCAAAGATTGAGGCTCTCATGGATGTATCCAGTCCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 72 bp | CAAGGCCTGGGCACAAGAAACACAGCACCTGGTTGCTaGACCCAGAGATGCAACACAATCTTTCTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QGLGTRNTAPGC*TQRCNTIFLWA Trigger: TGCCCAGAGAAAGATTGTGTTGCATCTCTGGGTTCAGCAACCAGGTGCTGTGTTTCTTGTGCCCAGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 72 bp | ACTTGGTACTGGACCCAGCTATGTCACAATTCTCTCTaGAGGCAAGGCCTGGGCACAAGAAACACAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: TWYWTQLCHNSL*RQGLGTRNTAP Trigger: AGGTGCTGTGTTTCTTGTGCCCAGGCCTTGCCTGCAGAGAGAATTGTGACATAGCTGGGTCCAGTACCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | CTGCAGGCAAGGCCTGGGCACAAGAAACACAGCACCTaGTTGCTGAACCCAGAGATGCAACACAATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQARPGHKKHST*LLNPEMQHNLS Trigger: AGAAAGATTGTGTTGCATCTCTGGGTTCAGCAACCAGGTGCTGTGTTTCTTGTGCCCAGGCCTTGCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | GGCAGGGTGCAGGCTGAAGAAGAGTCACATCACCTGTaGACCAGGCCCGCATATGAAAGTCAATTATCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GRVQAEEESHHL*TRPAYESQLSN Trigger: GTTGGATAATTGACTTTCATATGCGGGCCTGGTCCACAGGTGATGTGACTCTTCTTCAGCCTGCACCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599414.5 |
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| CDS TCA 72 bp | TGTCACAATCACACGTCATCTAGGTGCTGGGTCCAGTaGTACATCACAATCCTCTTTTGGCAGGGTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CHNHTSSRCWVQ*YITILFWQGAG Trigger: GCCTGCACCCTGCCAAAAGAGGATTGTGATGTATCACTGGACCCAGCACCTAGATGACGTGTGATTGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598381.5 |
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| CDS GCA 72 bp | GGTCCAGTGATACATCACAATCCTCTTTTGGCAGGGTaGAGGCTGAAGAAGAGTCACATCACCTGTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: GPVIHHNPLLAG*RLKKSHITCGP Trigger: TGGTCCACAGGTGATGTGACTCTTCTTCAGCCTGCACCCTGCCAAAAGAGGATTGTGATGTATCACTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599414.5 |
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| CDS TCA 72 bp | AAGATGAGAGTTACGTCATCTAGGTGCTGGGTCCAGTaGTACATCACAATCCTCTTTTGGCAGGGTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: KMRVTSSRCWVQ*YITILFWQGAG Trigger: GCCTGCACCCTGCCAAAAGAGGATTGTGATGTATCACTGGACCCAGCACCTAGATGACGTAACTCTCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000594012.5 ENST00000594312.1 ENST00000595461.5 ENST00000599414.5 |
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| CDS GCA 72 bp | TGGTTGACGGTATTGCAAGAGAGCCACAATTTTGTCTaGGGACTGTGCTTTTCAGTGCAGTCACAGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: WLTVLQESHNFV*GLCFSVQSQPH Trigger: GTGAGGCTGTGACTGCACTGAAAAGCACAGTCCGCAGACAAAATTGTGGCTCTCTTGCAATACCGTCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000594312.1 ENST00000595461.5 |
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| CDS GCA 72 bp | GGTCCAGTGATACATCACAATCCTCTTTTGGCAGGGTaGAGGCTGAAGAAGAGTCACATCACCTGCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GPVIHHNPLLAG*RLKKSHITCRK Trigger: TTTCCTGCAGGTGATGTGACTCTTCTTCAGCCTGCACCCTGCCAAAAGAGGATTGTGATGTATCACTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594012.5 ENST00000595461.5 |
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| CDS GCA 72 bp | GGTCCAGTGATACATCACAATCCTCTTTTGGCAGGGTaGAGGCTGAAGAAGAGTCACATCACCATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPVIHHNPLLAG*RLKKSHITISQ Trigger: CTGGGAAATGGTGATGTGACTCTTCTTCAGCCTGCACCCTGCCAAAAGAGGATTGTGATGTATCACTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598381.5 |
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| CDS GCA 72 bp | GATGTTGGATTCAGCAATGTGTCACAATCCGATCTGTaGACTAGGCACCAGGCAGGAGAGTCAAATCACTCA | + |
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Preference number: 6 (lower is better) Translates to: DVGFSNVSQSDL*TRHQAGESNHS Trigger: TGAGTGATTTGACTCTCCTGCCTGGTGCCTAGTGCACAGATCGGATTGTGACACATTGCTGAATCCAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 72 bp | CATTATATGGATGATGGGTTCACAAATATGTCACTATaGCCACTATGGGCAGGGTTCAGGCAGGAGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: HYMDDGFTNMSL*PLWAGFRQEAH Trigger: GTGAGCCTCCTGCCTGAACCCTGCCCATAGTGGGCATAGTGACATATTTGTGAACCCATCATCCATATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | GCAAGGCACAGACAACAAAGTCACGTTACTTGGTACTaGACCCAGCTATGTCACAATTCTCTCTGCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: ARHRQQSHVTWY*TQLCHNSLCRQ Trigger: TTGCCTGCAGAGAGAATTGTGACATAGCTGGGTCCAGTACCAAGTAACGTGACTTTGTTGTCTGTGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | GATGATGGGTTCACAAATATGTCACTATGCCCACTATaGGCAGGGTTCAGGCAGGAGGCTCACATTACCTTA | + |
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Preference number: 6 (lower is better) Translates to: DDGFTNMSLCPL*AGFRQEAHITL Trigger: TAAGGTAATGTGAGCCTCCTGCCTGAACCCTGCCCATAGTGGGCATAGTGACATATTTGTGAACCCATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 72 bp | TGTGGAAAGTTGTCAATTTTCACTGTTGGCTGGGTTTaGATACGAGTGTCACAATGTCACCTGGGTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: CGKLSIFTVGWV*IRVSQCHLGAR Trigger: CCTAGCACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CAA 90 bp | TCAACAGTGAGCTGTGTTCATGTGGAAAGTTGTCAATTTTCACTGTaGGCTGGGTTTGCATACGAGTGTCACAATGTCACCTGGGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: STVSCVHVESCQFSL*AGFAYECHNVTWVL Trigger: TAGCACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACACAGCTCACTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 72 bp | AATCACACCCAAAATATGCAAGGTCCAGGCAAAAGATaGGAGTTACGTCATCTAGGTGCTGGGTCCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: NHTQNMQGPGKR*ELRHLGAGSSD Trigger: ATCACTGGACCCAGCACCTAGATGACGTAACTCTCATCTTTTGCCTGGACCTTGCATATTTTGGGTGTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000594012.5 ENST00000595461.5 ENST00000599414.5 |
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| CDS CAA 72 bp | GCAGGATCCAGCAAGGAAAGTTACATCACCTGGATGTaGCACATAGCAATGTCACAATGGCCCATGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: AGSSKESYITWM*HIAMSQWPMKI Trigger: TATCTTCATGGGCCATTGTGACATTGCTATGTGCAACATCCAGGTGATGTAACTTTCCTTGCTGGATCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS GCA 72 bp | TACAAACTCATAATCATACCTGTGGACCTAGGCTCATaGATTAGAGTCAACATCTCTCCAATTGGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: YKLIIIPVDLGS*IRVNISPIGWV Trigger: GACCCAGCCAATTGGAGAGATGTTGACTCTAATGCATGAGCCTAGGTCCACAGGTATGATTATGAGTTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | GTCCTTGATAAGCATTCAACTGAATACAATTTAGTCTaGCTCAGTGAACCTGCATATTTGGCTGCCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: VLDKHSTEYNLV*LSEPAYLAASP Trigger: TGGGGAGGCAGCCAAATATGCAGGTTCACTGAGCCAGACTAAATTGTATTCAGTTGAATGCTTATCAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598288.5 |
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| CDS CCA 72 bp | TGTTCATGTGGAAAGTTGTCAATTTTCACTGTTGGCTaGGTTTGCATACGAGTGTCACAATGTCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: CSCGKLSIFTVG*VCIRVSQCHLG Trigger: ACCCAGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CCA 72 bp | GCTGTGTTCATGTGGAAAGTTGTCAATTTTCACTGTTaGCTGGGTTTGCATACGAGTGTCACAATGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: AVFMWKVVNFHC*LGLHTSVTMSP Trigger: AGGTGACATTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 72 bp | CAGCAACCTGGTAGAAAGAGAGTCACATTACTTGGGTaGTGGATGCAGATAGATTATAATGCTTCCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QQPGRKRVTLLG*WMQIDYNASCK Trigger: CTTGCAGGAAGCATTATAATCTATCTGCATCCATCACCCAAGTAATGTGACTCTCTTTCTACCAGGTTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593551.1 ENST00000593886.1 |
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| CDS GCA 72 bp | TGTTTCTCTAAGTCTAGCTACCAGCACCAGTATCTCTaGTATGGACTGGTTTGTGGTATGAGTATCATCATC | + |
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Preference number: 6 (lower is better) Translates to: CFSKSSYQHQYL*YGLVCGMSIII Trigger: GATGATGATACTCATACCACAAACCAGTCCATAGCAGAGATACTGGTGCTGGTAGCTAGACTTAGAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CAA 90 bp | TGTGAGATTCAGAACTTCAACAGTGAGCTGTGTTCATGTGGAAAGTaGTCAATTTTCACTGTTGGCTGGGTTTGCATACGAGTGTCACAA | + |
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Preference number: 6 (lower is better) Translates to: CEIQNFNSELCSCGK*SIFTVGWVCIRVSQ Trigger: TTGTGACACTCGTATGCAAACCCAGCCAACAGTGAAAATTGACAACTTTCCACATGAACACAGCTCACTGTTGAAGTTCTGAATCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS CAA 72 bp | GAGCATGGCCATAGCAGGAAAGAAGGGTCAAATTATTaGGTTTCTGGGCTCAAATATATGTCACAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EHGHSRKEGSNY*VSGLKYMSQSL Trigger: GAGAGATTGTGACATATATTTGAGCCCAGAAACCAAATAATTTGACCCTTCTTTCCTGCTATGGCCATGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 72 bp | CACTCTCTGTACCGTCCAAAGACTTTATACAAAATGTaGAAGAATGGTAATCCAGGACTTTACCTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HSLYRPKTLYKM*KNGNPGLYLFL Trigger: GAGAAACAGGTAAAGTCCTGGATTACCATTCTTTCACATTTTGTATAAAGTCTTTGGACGGTACAGAGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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| CDS TCA 72 bp | AGGGAAAAGCCAAGTAAGAAAGTCACATTATATGGATaGTGGGTTCACAAATATGTCACTATGCCCACTATG | + |
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Preference number: 6 (lower is better) Translates to: REKPSKKVTLYG*WVHKYVTMPTM Trigger: CATAGTGGGCATAGTGACATATTTGTGAACCCATCATCCATATAATGTGACTTTCTTACTTGGCTTTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593886.1 |
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