RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF423 (Homo sapiens)

Ensembl gene IDs: ENSG00000102935

Ensembl transcript IDs: ENST00000535559.5, ENST00000561648.5, ENST00000562520.1, ENST00000562871.5, ENST00000563137.7, ENST00000567169.5, ENST00000568094.2

Found 1730 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGCCTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATaGTCTCACATCCTACTGATCTCTATGACTGGGAACCTGCGGCTC +
Preference number: 1 (lower is better)
Translates to: PCLPHSRPGPRHQSQ*SHILLISMTGNLRL
Trigger: GAGCCGCAGGTTCCCAGTCATAGAGATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp TCAGTCACCTCGCCCACTCCCCAAAGCCAAATCCAAATGAGAGGCTaGTTCCATCGCGCCCTCCTGGCTGAAAAGGTGCCCTCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: SVTSPTPQSQIQMRG*FHRALLAEKVPSCR
Trigger: CCTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGATTTGGCTTTGGGGAGTGGGCGAGGTGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp CCTACTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTaGTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAA +
Preference number: 1 (lower is better)
Translates to: PTDLYDWEPAAPTWL*SAVPSHTSPCLRTQ
Trigger: TTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp GTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTaGCAAGGGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAG +
Preference number: 1 (lower is better)
Translates to: VTHLRASEPKCHLES*QGKGYPLACLYPTK
Trigger: CTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp CCGCCACCAGTCTCAATGCTCTCACATCCTACTGATCTCTATGACTaGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCCAGT +
Preference number: 1 (lower is better)
Translates to: PPPVSMLSHPTDLYD*EPAAPTWLCSAVPS
Trigger: ACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp CTTTGCCATCACGGCACTCATGACCAGGTGTGGCTATGCATTTACTaGCATGCTTGCCTGTGCCACTGTGGCCTCCATGAGGCCAGGGAC +
Preference number: 1 (lower is better)
Translates to: LCHHGTHDQVWLCIY*HACLCHCGLHEARD
Trigger: GTCCCTGGCCTCATGGAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp CCTGGCAGCTTCTGGCTTTGCCATCACGGCACTCATGACCAGGTGTaGCTATGCATTTACTGGCATGCTTGCCTGTGCCACTGTGGCCTC +
Preference number: 1 (lower is better)
Translates to: PGSFWLCHHGTHDQV*LCIYWHACLCHCGL
Trigger: GAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp GCTATGCATTTACTGGCATGCTTGCCTGTGCCACTGTGGCCTCCATaGGGCCAGGGACCACATCTGCTGGTCATCTCCTTATCCCCAGTG +
Preference number: 1 (lower is better)
Translates to: AMHLLACLPVPLWPP*GQGPHLLVISLSPV
Trigger: CACTGGGGATAAGGAGATGACCAGCAGATGTGGTCCCTGGCCTCATGGAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp CACAATCAGCATGGTGACCAACCTGCTGCGTGGCCTTGGGAAAGCTaGACGTTACCCTTGGGCCTCTGTTTCCCCATCCAAGAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: HNQHGDQPAAWPWES*TLPLGLCFPIQEWE
Trigger: TTCCCACTCTTGGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAGGTTGGTCACCATGCTGATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp ACTCATGACCAGGTGTGGCTATGCATTTACTGGCATGCTTGCCTGTaGCACTGTGGCCTCCATGAGGCCAGGGACCACATCTGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: THDQVWLCIYWHACL*HCGLHEARDHICWS
Trigger: TGACCAGCAGATGTGGTCCCTGGCCTCATGGAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp TCACATCCTACTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTaGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGA +
Preference number: 1 (lower is better)
Translates to: SHPTDLYDWEPAAPT*LCSAVPSHTSPCLR
Trigger: TCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGTAGGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp TTAGGCTTTCAGTCACCTCGCCCACTCCCCAAAGCCAAATCCAAATaGGAGGCTGATTCCATCGCGCCCTCCTGGCTGAAAAGGTGCCCT +
Preference number: 1 (lower is better)
Translates to: LGFQSPRPLPKAKSK*EADSIAPSWLKRCP
Trigger: AGGGCACCTTTTCAGCCAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGATTTGGCTTTGGGGAGTGGGCGAGGTGACTGAAAGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTaGCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCC +
Preference number: 1 (lower is better)
Translates to: DFSHDSFSTETETLT*LLLGTLGRCSMTGA
Trigger: GGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp AGCTTCTGGCTTTGCCATCACGGCACTCATGACCAGGTGTGGCTATaGATTTACTGGCATGCTTGCCTGTGCCACTGTGGCCTCCATGAG +
Preference number: 1 (lower is better)
Translates to: SFWLCHHGTHDQVWL*IYWHACLCHCGLHE
Trigger: CTCATGGAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp CTTCTATTGGTAGTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTaGGATAAATCCAGAGCTGGAGAGGGCCCTGAGACGGAGATGTGG +
Preference number: 1 (lower is better)
Translates to: LLLVVTEGSPGLHGV*DKSRAGEGPETEMW
Trigger: CCACATCTCCGTCTCAGGGCCCTCTCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAACTACCAATAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp CAGCTCTCTAAGGGTACTTCTGGCTCGTTTCCAGCTCACGGCTTCTaGATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCCCACCT +
Preference number: 1 (lower is better)
Translates to: QLSKGTSGSFPAHGF*ICSVLFPLLLDCPP
Trigger: AGGTGGGCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAAACGAGCCAGAAGTACCCTTAGAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp AGAAGACTTCACAATCAGCATGGTGACCAACCTGCTGCGTGGCCTTaGGAAAGCTGCACGTTACCCTTGGGCCTCTGTTTCCCCATCCAA +
Preference number: 1 (lower is better)
Translates to: RRLHNQHGDQPAAWP*ESCTLPLGLCFPIQ
Trigger: TTGGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAGGTTGGTCACCATGCTGATTGTGAAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp CACTTCATACAAGCCTCCCAGAGACCCTCTAAGGCCCCTCACAGTTaGAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTTCCTCTGGAA +
Preference number: 1 (lower is better)
Translates to: HFIQASQRPSKAPHS*KASVSSQLQTFPLE
Trigger: TTCCAGAGGAAAGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGGGTCTCTGGGAGGCTTGTATGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp TCCATTAATCCCTGGCAGCTTCTGGCTTTGCCATCACGGCACTCATaGCCAGGTGTGGCTATGCATTTACTGGCATGCTTGCCTGTGCCA +
Preference number: 1 (lower is better)
Translates to: SINPWQLLALPSRHS*PGVAMHLLACLPVP
Trigger: TGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGGGATTAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp CTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTaGAGGGAAAGCCAAGAAGACTTCACAATCAGCATGGTGACCAAC +
Preference number: 1 (lower is better)
Translates to: LPTCLPVSNKGESQP*RESQEDFTISMVTN
Trigger: GTTGGTCACCATGCTGATTGTGAAGTCTTCTTGGCTTTCCCTTCAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp CATTTCCGCTCTGCAGAGGGTAATAACCAATTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGGTTTCCCCGTGCAAGTTCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: HFRSAEGNNQFPCPL*KVSKEGFPRASSGL
Trigger: GAGGCCAGAACTTGCACGGGGAAACCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAATTGGTTATTACCCTCTGCAGAGCGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 90 bp AAGGGGTTAGTGAGTTCTCCGAGGCACAGGTTTATAACCCTACACTaGTCCCCAACCCTAATACCACCTGATGGTAAAGAATGCCAGTCC +
Preference number: 1 (lower is better)
Translates to: KGLVSSPRHRFITLH*SPTLIPPDGKECQS
Trigger: GGACTGGCATTCTTTACCATCAGGTGGTATTAGGGTTGGGGAGCAGTGTAGGGTTATAAACCTGTGCCTCGGAGAACTCACTAACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp ACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCTCCGAGGCACAGGTTTATAACCCTA +
Preference number: 1 (lower is better)
Translates to: TVERQVSHPSSRPFL*KGLVSSPRHRFITL
Trigger: TAGGGTTATAAACCTGTGCCTCGGAGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp TCCCAGCCTGGGCAAAATTCCTCTGCCCAGAGAGCCGCTAGAAACTaGCAATTTGTACATCTAAATACAGCAGCAATGAACCTTAGGCTT +
Preference number: 1 (lower is better)
Translates to: SQPGQNSSAQRAARN*QFVHLNTAAMNLRL
Trigger: AAGCCTAAGGTTCATTGCTGCTGTATTTAGATGTACAAATTGTCAGTTTCTAGCGGCTCTCTGGGCAGAGGAATTTTGCCCAGGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 90 bp GTGACAGAAAGAAAGGGGAACTCTTATAGGTCACCAGAAGCCCCTTaGTATGGGAGTCTTCTAGAAGATGATGGGTATAATTGCTCCAAA +
Preference number: 1 (lower is better)
Translates to: VTERKGNSYRSPEAP*YGSLLEDDGYNCSK
Trigger: TTTGGAGCAATTATACCCATCATCTTCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGACCTATAAGAGTTCCCCTTTCTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 90 bp ATGATTGTTATAATAAAATTAACAATGGAGTCAGACACCCCAGGCTaGAAGGTGAGGCACCCAAGTTATAGTCGCAAGTCTATCCTGAAT +
Preference number: 1 (lower is better)
Translates to: MIVIIKLTMESDTPG*KVRHPSYSRKSILN
Trigger: ATTCAGGATAGACTTGCGACTATAACTTGGGTGCCTCACCTTCCAGCCTGGGGTGTCTGACTCCATTGTTAATTTTATTATAACAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGAGCTGGAGAGGGCCCTaGGACGGAGATGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWSWRGP*DGDVAG
Trigger: GCCTGCCACATCTCCGTCTCAGGGCCCTCTCCAGCT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATCGCGCCCTCCTGGCTaGAAAGGTGCCCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPSRPPG*KGALLQ
Trigger: CTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGGCCCCGGGACATACTaGTCCCATCGACAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWGPGTY*SHRQSQ
Trigger: CTGGGACTGTCGATGGGACCAGTATGTCCCGGGGCC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGTCGGTGGGGTTCCCTaGCTGCCTTGTCACCGCCAT +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWVGGVP*LPCHRH
Trigger: ATGGCGGTGACAAGGCAGCCAGGGAACCCCACCGAC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGTCGGTGGGGTTCCCTaGCTGCCTTGTCACCGCCAT +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPVGGVP*LPCHRH
Trigger: ATGGCGGTGACAAGGCAGCCAGGGAACCCCACCGAC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGCCCTCCTGCAGGATaGCTGGCACCATCATTGATG +
Preference number: 2 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVCPPAG*LAPSLM
Trigger: CATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCACGCGGCCCTAGGCTaGGGAGGAGAGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVHAALG*GGENQA
Trigger: TGCCTGGTTCTCTCCTCCCCAGCCTAGGGCCGCGTG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAAGGGGTCTTCTGCTTTaGCTCCTGTGGCCACTGCCA +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPRGLLL*LLWPLP
Trigger: TGGCAGTGGCCACAGGAGTCAAAGCAGAAGACCCCT...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGCAGGGTCTATTGTGTaGAGGTCCCCAAGGGCGTGT +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWAGSIV*RSPRAC
Trigger: ACACGCCCTTGGGGACCTGCACACAATAGACCCTGC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGGAAGGGTTTCCCCGTaGAAGTTCTGGCCTCTGATT +
Preference number: 2 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVGRVSP*KFWPLI
Trigger: AATCAGAGGCCAGAACTTGCACGGGGAAACCCTTCC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGTCTTCCCCCAAAACTaGCAGGTCTCCAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPVFPQN*QVSRRL
Trigger: CAGCCTCCTGGAGACCTGGCAGTTTTGGGGGAAGAC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAAACCCAAGTGCCACCTaGAGTCCTGGCAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPNPSAT*SPGKGR
Trigger: CCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTT...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGCAACAGCCCACTACTaGCAGGGTCTGCTCTATGAT +
Preference number: 2 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVATAHY*QGLLYD
Trigger: ATCATAGAGCAGACCCTGCCAGTAGTGGGCTGTTGC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCGCTGCACGTTACCCTTaGGCCTCTGTTTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: QSPVTHLRASEPKCHLESAARYP*ASVSPS
Trigger: GGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGC...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGAAGGGGTCTTCTGCTTTaGCTCCTGTGGCCACTGCCA +
Preference number: 2 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRRGLLL*LLWPLP
Trigger: TGGCAGTGGCCACAGGAGTCAAAGCAGAAGACCCCT...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGAGTCCCCAAGGGCGTGTaGAAGCCCACAGGAACTTGT +
Preference number: 2 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRVPKGV*KPTGTC
Trigger: ACAAGTTCCTGTGGGCTTGCACACGCCCTTGGGGAC...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCAGGGTCTATTGTGTaGAGGTCCCCAAGGGCGTGT +
Preference number: 2 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAAGSIV*RSPRAC
Trigger: ACACGCCCTTGGGGACCTGCACACAATAGACCCTGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCCTGAGACGGAGATGTaGCAGGCCCCGGGACATACT +
Preference number: 2 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHPETEM*QAPGHT
Trigger: AGTATGTCCCGGGGCCTGCCACATCTCCGTCTCAGG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 90 bp AACCCAAGTGCCACCTGGAGTCCTGGCAAGGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NPSATWSPGKGRATH*PACIQQRGKPTLKG
Trigger: TCCCTTCAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCAAGTTCTGGCCTCTaGTTGGCAAGTCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAASSGL*LASQLS
Trigger: GCTCAGCTGACTTGCCAATCAGAGGCCAGAACTTGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCGTGAGAACATTACATaGGGTGACAGAAAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVRENIT*GDRKKG
Trigger: CCCTTTCTTTCTGTCACCTCATGTAATGTTCTCACG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGAAGGGCTACCCACTTaGCTGCCTGTATCCAACAAA +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPEGLPT*LPVSNK
Trigger: TTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCACGCCACCAGTCTCAATaGTCTCACATCCTACTGATC +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPRHQSQ*SHILLI
Trigger: GATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCG...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: QSPVTHLRASEPKCHLESDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCACGCGGCCCTAGGCTaGGGAGGAGAGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTHAALG*GGENQA
Trigger: TGCCTGGTTCTCTCCTCCCCAGCCTAGGGCCGCGTG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGCTGCACGTTACCCTTaGGCCTCTGTTTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: GRATHLPACIQQRGKPTLAARYP*ASVSPS
Trigger: GGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCACTTAGAGGAACACTaGTGTCTACCCTGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWHLEEH*CLPWGL
Trigger: AAGACCCCAGGGTAGACACCAGTGTTCCTCTAAGTG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCCATCGCGCCCTCCTaGCTGAAAAGGTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSIAPS*LKRCPP
Trigger: AGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWFPCPL*KVSKEG
Trigger: CCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTAGCCGGCTTCGCTGCTaGTTCCCACATGGCGTGAAA +
Preference number: 2 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPSRLRC*FPHGVK
Trigger: TTTCACGCCATGTGGGAATCAGCAGCGAAGCCGGCT...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAGACTCCTGTGGCCACTaGCAGCCTGTCCAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRDSCGH*QPVQSA
Trigger: TGCAGACTGGACAGGCTGGCAGTGGCCACAGGAGTC...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGCAGGGTCTGCTCTATaGTTCACATATGTAAGATGC +
Preference number: 2 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPAGSAL*FTYVRC
Trigger: GCATCTTACATATGTGAATCATAGAGCAGACCCTGC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCATCCAAATGAGAGGCTaGTTCCATCGCGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCIQMRG*FHRALL
Trigger: CAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGAT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACGTGGGGTTCCCTGGCTaGCTTGTCACCGCCATAAAC +
Preference number: 2 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDVGFPG*LVTAIN
Trigger: GTTTATGGCGGTGACAAGGCAGCCAGGGAACCCCAC...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCTGGCTGTGGATGTGTaGCAGCCTCACTCAGACATA +
Preference number: 2 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHLAVDV*QPHSDI
Trigger: TATGTCTGAGTGAGGCTGCCACACATCCACAGCCAG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTTAATCACTGTCCGGTaGACTGGCAAATCCAATCAA +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWLITVR*TGKSNQ
Trigger: TTGATTGGATTTGCCAGTTCACCGGACAGTGATTAA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACGCAAGTTCTGGCCTCTaGTTGGCAAGTCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDASSGL*LASQLS
Trigger: GCTCAGCTGACTTGCCAATCAGAGGCCAGAACTTGC...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTCTATTGGTAGTTACTaGGGGCTCACCTGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPSIGSY*GLTWAP
Trigger: TGGAGCCCAGGTGAGCCCTCAGTAACTACCAATAGA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCACTGATCTCTATGACTaGGAACCTGCGGCTCCTACC +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCTDLYD*EPAAPT
Trigger: GGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCACTGGTGTCTACCCTaGGGTCTTCCCCCAAAACTG +
Preference number: 2 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDHWCLP*GLPPKL
Trigger: CAGTTTTGGGGGAAGACCCCAGGGTAGACACCAGTG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCTGATGGTAAAGAATaGCAGTCCCAGGAAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRPDGKE*QSQEGP
Trigger: AGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCCTGATGGTAAAGAATaGCAGTCCCAGGAAGGGCCT +
Preference number: 2 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDPDGKE*QSQEGP
Trigger: AGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTAAACCCTTACCTGCCTaGTTCTGGGCACTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTKPLPA*FWALWA
Trigger: TGCCCAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTT...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACACTGTCCGGTGAACTaGCAAATCCAATCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRHCPVN*QIQSKH
Trigger: ATGCTTTGATTGGATTTGCCAGTTCACCGGACAGTG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACGGATGCTAATCGCATaGATTCCCTTTATTGAACTG +
Preference number: 2 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILRMLIA*IPFIEL
Trigger: CAGTTCAATAAAGGGAATCCATGCGATTAGCATCCG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAGCAACAGCCCACTACTaGCAGGGTCTGCTCTATGAT +
Preference number: 2 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRATAHY*QGLLYD
Trigger: ATCATAGAGCAGACCCTGCCAGTAGTGGGCTGTTGC...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCFPCPL*KVSKEG
Trigger: CCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCACCAGAAGCCCCTTaGTATGGGAGTCTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSPEAP*YGSLLE
Trigger: TTCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGCCCCGGGACATACTaGTCCCATCGACAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGPGTY*SHRQSQ
Trigger: CTGGGACTGTCGATGGGACCAGTATGTCCCGGGGCC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSRPFL*KGLVSS
Trigger: AGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAACCATCCAGTTGCACTaGAACCGATTATATTCATTA +
Preference number: 2 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILTIQLH*NRLYSL
Trigger: TAATGAATATAATCGGTTTCAGTGCAACTGGATGGT...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTACTTGCTGAATGGATaGGTAGAGGAAGGGATGGAT +
Preference number: 2 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCYLLNG*VEEGMD
Trigger: ATCCATCCCTTCCTCTACTCATCCATTCAGCAAGTA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGAACTGTACTAGTTACTaGAGTCAGATTAAGTCACAT +
Preference number: 2 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWNCTSY*SQIKSH
Trigger: ATGTGACTTAATCTGACTGCAGTAACTAGTACAGTT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCCTGTCCAGTCTGCATaGATTAGGTTACTACGATTC +
Preference number: 2 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDPVQSA*IRLLRF
Trigger: GAATCGTAGTAACCTAATGCATGCAGACTGGACAGG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTAGTCACACATCTCCGTaGCTCAGAACCCAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: DFSHDSFSTETETLTCLLSHTSP*LRTQVP
Trigger: TGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACT...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGATGATGGGTATAATTaGTCCAAATTCCACACCCGT +
Preference number: 2 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPDDGYN*SKFHTR
Trigger: ACGGGTGTGGAATTTGGAGCAATTATACCCATCATC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGATGGATTCCCTTTATTaGACTGTACTAGTTACTGCA +
Preference number: 2 (lower is better)
Translates to: QAPASARPSLMHPCVSYTMDSLY*TVLVTA
Trigger: TGCAGTAACTAGTACAGTTCAATAAAGGGAATCCAT...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCGTGAGAACATTACATaGGGTGACAGAAAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTRENIT*GDRKKG
Trigger: CCCTTTCTTTCTGTCACCTCATGTAATGTTCTCACG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGCAGACCATCCAGTTaGACTGAAACCGATTATATT +
Preference number: 2 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGSRPSS*TETDYI
Trigger: AATATAATCGGTTTCAGTGCAACTGGATGGTCTGCT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCACTTAGAGGAACACTaGTGTCTACCCTGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: DFSHDSFSTETETLTCLLHLEEH*CLPWGL
Trigger: AAGACCCCAGGGTAGACACCAGTGTTCCTCTAAGTG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: GRSGYSIIKGSSALTPVASRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGTCTTCCCCCAAAACTaGCAGGTCTCCAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRVFPQN*QVSRRL
Trigger: CAGCCTCCTGGAGACCTGGCAGTTTTGGGGGAAGAC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
3UTR CAA 90 bp ATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGACACTTaGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCG +
Preference number: 2 (lower is better)
Translates to: MAKSLEFYIWVANDT*IGCNVQMALPTASP
Trigger: CGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
3UTR-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTTTATAACCCTACACTaGTCCCCAACCCTAATACCA +
Preference number: 2 (lower is better)
Translates to: DFSHDSFSTETETLTCLLFITLH*SPTLIP
Trigger: TGGTATTAGGGTTGGGGAGCAGTGTAGGGTTATAAA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
3UTR-3UTR TCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCACCATCCAGTTGCACTaGAACCGATTATATTCATTA +
Preference number: 2 (lower is better)
Translates to: GRSGYSIIKGSSALTPVATIQLH*NRLYSL
Trigger: TAATGAATATAATCGGTTTCAGTGCAACTGGATGGT...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCAGGAGGCTGAAAATTaGCATTCACAGCCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNQEAEN*HSQPSV
Trigger: AACTGAAGGCTGTGAATGCCAATTTTCAGCCTCCTG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACACTGGTGTCTACCCTaGGGTCTTCCCCCAAAACTG +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKHWCLP*GLPPKL
Trigger: CAGTTTTGGGGGAAGACCCCAGGGTAGACACCAGTG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATTTAATCACTGTCCGGTaGACTGGCAAATCCAATCAA +
Preference number: 2 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNLITVR*TGKSNQ
Trigger: TTGATTGGATTTGCCAGTTCACCGGACAGTGATTAA...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATTCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNSRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTGGCTGTGGATGTGTaGCAGCCTCACTCAGACATA +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKLAVDV*QPHSDI
Trigger: TATGTCTGAGTGAGGCTGCCACACATCCACAGCCAG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 90 bp AGGCACCCAAGTTATAGTCGCAAGTCTATCCTGAATGGTATGATCTaGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTA +
Preference number: 2 (lower is better)
Translates to: RHPSYSRKSILNGMI*DKILNFSGIVLSHL
Trigger: TAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAAGATCATACCATTCAGGATAGACTTGCGACTATAACTTGGGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATTACAGGTCTCTGTGTaGAGCCCTTTGTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKLQVSV*SPLSGI
Trigger: GATGCCTGACAAAGGGCTGCACACAGAGACCTGTAA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKSRPFL*KGLVSS
Trigger: AGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACAGGAGGCTGAAAATTaGCATTCACAGCCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKQEAEN*HSQPSV
Trigger: AACTGAAGGCTGTGAATGCCAATTTTCAGCCTCCTG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR GCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATACATTATAATTAGGTaGAATCTGTCTGCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: LDKILNFSGIVLSHLELKYIIIR*NLSACF
Trigger: GAAACAGGCAGACAGATTGCACCTAATTATAATGTA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp CCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATaGCAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATT +
Preference number: 3 (lower is better)
Translates to: PACFWALWAGVP*QGPVAQGSWSI
Trigger: AATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTaGCTCAGAACCCAAGTGCCACCTGGAGTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: WLCSAVPSHTSP*LRTQVPPGVLA
Trigger: TGCCAGGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp CTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTaGTCTGCAGTCCCCAGTCACACATCTCCGTGCCTC +
Preference number: 3 (lower is better)
Translates to: LYDWEPAAPTWL*SAVPSHTSPCL
Trigger: GAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp CTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTaGCAAGGGAAGGGCTACCCACTTGCCTGCCTGTAT +
Preference number: 3 (lower is better)
Translates to: LRASEPKCHLES*QGKGYPLACLY
Trigger: ATACAGGCAGGCAAGTGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp CACTGTGGCCTCCATGAGGCCAGGGACCACATCTGCTaGTCATCTCCTTATCCCCAGTGCCCTGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: HCGLHEARDHIC*SSPYPQCPVQC
Trigger: GCACTGCACAGGGCACTGGGGATAAGGAGATGACCAGCAGATGTGGTCCCTGGCCTCATGGAGGCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGCCTGGCACCATCATaGATGACCATGCTGCTTACA +
Preference number: 3 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVCLAPS*MTMLLT
Trigger: TGTAAGCAGCATGGTCATCAATGATGGTGCCAGGCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp CCAAATGAGAGGCTGATTCCATCGCGCCCTCCTGGCTaGAAAGGTGCCCTCCTGCAGGATGCCTGGCACCAT +
Preference number: 3 (lower is better)
Translates to: PNERLIPSRPPG*KGALLQDAWHH
Trigger: ATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGAATCAGCCTCTCATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp GAGGCTGATTCCATCGCGCCCTCCTGGCTGAAAAGGTaGCCTCCTGCAGGATGCCTGGCACCATCATTGATG +
Preference number: 3 (lower is better)
Translates to: EADSIAPSWLKR*PPAGCLAPSLM
Trigger: CATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGAATCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp GGGTGGGCACACTTAGAGGAACACTGGTGTCTACCCTaGGGTCTTCCCCCAAAACTGCCAGGTCTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GWAHLEEHWCLP*GLPPKLPGLQE
Trigger: CTCCTGGAGACCTGGCAGTTTTGGGGGAAGACCCCAGGGTAGACACCAGTGTTCCTCTAAGTGTGCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAGGGGAGCAGGGTCTATaGTGTGCAGGTCCCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRGEQGL*CAGPQG
Trigger: CCCTTGGGGACCTGCACACAATAGACCCTGCTCCCC...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAA +
Preference number: 3 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVGRATH*PACIQQ
Trigger: TTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGTCACCAGAAGCCCCTaGATATGGGAGTCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWVTRSP*IWESSR
Trigger: TCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGAC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp TCGCCCACTCCCCAAAGCCAAATCCAAATGAGAGGCTaGTTCCATCGCGCCCTCCTGGCTGAAAAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: SPTPQSQIQMRG*FHRALLAEKVP
Trigger: GGGCACCTTTTCAGCCAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGATTTGGCTTTGGGGAGTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp CATGGTGACCAACCTGCTGCGTGGCCTTGGGAAAGCTaGACGTTACCCTTGGGCCTCTGTTTCCCCATCCAA +
Preference number: 3 (lower is better)
Translates to: HGDQPAAWPWES*TLPLGLCFPIQ
Trigger: TTGGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAGGTTGGTCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp GCGCCCTCCTGGCTGAAAAGGTGCCCTCCTGCAGGATaGCTGGCACCATCATTGATGACCATGCTGCTTACA +
Preference number: 3 (lower is better)
Translates to: APSWLKRCPPAG*LAPSLMTMLLT
Trigger: TGTAAGCAGCATGGTCATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp TTCCATCGCGCCCTCCTGGCTGAAAAGGTGCCCTCCTaGAGGATGCCTGGCACCATCATTGATGACCATGCT +
Preference number: 3 (lower is better)
Translates to: FHRALLAEKVPS*RMPGTIIDDHA
Trigger: AGCATGGTCATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp CATGACCAGGTGTGGCTATGCATTTACTGGCATGCTTaGCTGTGCCACTGTGGCCTCCATGAGGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: HDQVWLCIYWHA*LCHCGLHEARD
Trigger: GTCCCTGGCCTCATGGAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp CGGGTCCCTCCATTAATCCCTGGCAGCTTCTGGCTTTaGCATCACGGCACTCATGACCAGGTGTGGCTATGC +
Preference number: 3 (lower is better)
Translates to: RVPPLIPGSFWL*HHGTHDQVWLC
Trigger: GCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGGGATTAATGGAGGGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp CTGCTGCGTGGCCTTGGGAAAGCTGCACGTTACCCTTaGGCCTCTGTTTCCCCATCCAAGAGTGGGAAGATC +
Preference number: 3 (lower is better)
Translates to: LLRGLGKAARYP*ASVSPSKSGKI
Trigger: GATCTTCCCACTCTTGGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp ACTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTaGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCG +
Preference number: 3 (lower is better)
Translates to: TDLYDWEPAAPT*LCSAVPSHTSP
Trigger: CGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGCTGCACGTTACCCTaGGGCCTCTGTTTCCCCATC +
Preference number: 3 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSCTLP*GLCFPI
Trigger: GATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp CCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATaGTCTCACATCCTACTGATCTCTATGACTGGGAAC +
Preference number: 3 (lower is better)
Translates to: PHSRPGPRHQSQ*SHILLISMTGN
Trigger: GTTCCCAGTCATAGAGATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp CACAATCAGCATGGTGACCAACCTGCTGCGTGGCCTTaGGAAAGCTGCACGTTACCCTTGGGCCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: HNQHGDQPAAWP*ESCTLPLGLCF
Trigger: GAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAGGTTGGTCACCATGCTGATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGGGGAGCAGGGTCTATaGTGTGCAGGTCCCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAGEQGL*CAGPQG
Trigger: CCCTTGGGGACCTGCACACAATAGACCCTGCTCCCC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp AGCAAGGAAGGGTTTCCCCGTGCAAGTTCTGGCCTCTaGTTGGCAAGTCAGCTGAGCACCAGCATGATGGAG +
Preference number: 3 (lower is better)
Translates to: SKEGFPRASSGL*LASQLSTSMME
Trigger: CTCCATCATGCTGGTGCTCAGCTGACTTGCCAATCAGAGGCCAGAACTTGCACGGGGAAACCCTTCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp CAAGCCTCCCAGAGACCCTCTAAGGCCCCTCACAGTTaGAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTT +
Preference number: 3 (lower is better)
Translates to: QASQRPSKAPHS*KASVSSQLQTF
Trigger: AAAGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGGGTCTCTGGGAGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp CCCTGGCAGCTTCTGGCTTTGCCATCACGGCACTCATaGCCAGGTGTGGCTATGCATTTACTGGCATGCTTG +
Preference number: 3 (lower is better)
Translates to: PWQLLALPSRHS*PGVAMHLLACL
Trigger: CAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp TGCCCACCTCCCTTATTTCTTCAGGTCTCAAGCCCCTaGCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: CPPPLFLQVSSP*LSKAFLNAPLC
Trigger: ACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTGAGACCTGAAGAAATAAGGGAGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGGTCACCAGAAGCCCCTaGATATGGGAGTCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: QAPASARPSLMHPCVSYTVTRSP*IWESSR
Trigger: TCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGAC...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp GAAGGGAAAGCCAAGAAGACTTCACAATCAGCATGGTaGCCAACCTGCTGCGTGGCCTTGGGAAAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: EGKAKKTSQSAW*PTCCVALGKLH
Trigger: GTGCAGCTTTCCCAAGGCCACGCAGCAGGTTGGTCACCATGCTGATTGTGAAGTCTTCTTGGCTTTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp GGGTCTTCCCCCAAAACTGCCAGGTCTCCAGGAGGCTaGAAATTGGCATTCACAGCCTTCAGTTTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GSSPKTARSPGG*KLAFTAFSFQE
Trigger: CTCCTGGAAACTGAAGGCTGTGAATGCCAATTTTCAGCCTCCTGGAGACCTGGCAGTTTTGGGGGAAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp ACTTCTGGCTCGTTTCCAGCTCACGGCTTCTGCATTTaGAGTGTTCTCTTCCCACTGCTCTTGGACTGCCCA +
Preference number: 3 (lower is better)
Translates to: TSGSFPAHGFCI*SVLFPLLLDCP
Trigger: TGGGCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAAACGAGCCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp GTCTCAATGCTCTCACATCCTACTGATCTCTATGACTaGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: VSMLSHPTDLYD*EPAAPTWLCSA
Trigger: TGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGTAGGATGTGAGAGCATTGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp AGGCAAGTGTCTCATCCCAGCTCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCTCCGAGGCACAGGTTT +
Preference number: 3 (lower is better)
Translates to: RQVSHPSSRPFL*KGLVSSPRHRF
Trigger: AAACCTGTGCCTCGGAGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGAGCTGGGATGAGACACTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp TTCTGGCTTTGCCATCACGGCACTCATGACCAGGTGTaGCTATGCATTTACTGGCATGCTTGCCTGTGCCAC +
Preference number: 3 (lower is better)
Translates to: FWLCHHGTHDQV*LCIYWHACLCH
Trigger: GTGGCACAGGCAAGCATGCCAGTAAATGCATAGCCACACCTGGTCATGAGTGCCGTGATGGCAAAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR GCA 72 bp AAGGGTACTTCTGGCTCGTTTCCAGCTCACGGCTTCTaGATTTGCAGTGTTCTCTTCCCACTGCTCTTGGAC +
Preference number: 3 (lower is better)
Translates to: KGTSGSFPAHGF*ICSVLFPLLLD
Trigger: GTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAAACGAGCCAGAAGTACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACATGGATTCCCTTTATaGAACTGTACTAGTTACTGC +
Preference number: 3 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILHGFPL*NCTSYC
Trigger: GCAGTAACTAGTACAGTTCAATAAAGGGAATCCATG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTCTGTGTGCAGCCCTTaGTCAGGCATCACTTCATAC +
Preference number: 3 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSVCSP*SGITSY
Trigger: GTATGAAGTGATGCCTGACAAAGGGCTGCACACAGA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp TGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTaGAGGGAAAGCCAAGAAGACTTCACAATCAGCATG +
Preference number: 3 (lower is better)
Translates to: CLPVSNKGESQP*RESQEDFTISM
Trigger: CATGCTGATTGTGAAGTCTTCTTGGCTTTCCCTTCAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp ACGTTACCCTTGGGCCTCTGTTTCCCCATCCAAGAGTaGGAAGATCAGGGTATTCCATCATTAAGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: TLPLGLCFPIQE*EDQGIPSLRGL
Trigger: AAGACCCCTTAATGATGGAATACCCTGATCTTCCCACTCTTGGATGGGGAAACAGAGGCCCAAGGGTAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAA +
Preference number: 3 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGRATH*PACIQQ
Trigger: TTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp TCTGCAGAGGGTAATAACCAATTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGGTTTCCCCGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: SAEGNNQFPCPL*KVSKEGFPRAS
Trigger: ACTTGCACGGGGAAACCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAATTGGTTATTACCCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp GGGCAAAATTCCTCTGCCCAGAGAGCCGCTAGAAACTaGCAATTTGTACATCTAAATACAGCAGCAATGAAC +
Preference number: 3 (lower is better)
Translates to: GQNSSAQRAARN*QFVHLNTAAMN
Trigger: GTTCATTGCTGCTGTATTTAGATGTACAAATTGTCAGTTTCTAGCGGCTCTCTGGGCAGAGGAATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp ATAATAAAATTAACAATGGAGTCAGACACCCCAGGCTaGAAGGTGAGGCACCCAAGTTATAGTCGCAAGTCT +
Preference number: 3 (lower is better)
Translates to: IIKLTMESDTPG*KVRHPSYSRKS
Trigger: AGACTTGCGACTATAACTTGGGTGCCTCACCTTCCAGCCTGGGGTGTCTGACTCCATTGTTAATTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR TCA 72 bp AGAAAGGGGAACTCTTATAGGTCACCAGAAGCCCCTTaGTATGGGAGTCTTCTAGAAGATGATGGGTATAAT +
Preference number: 3 (lower is better)
Translates to: RKGNSYRSPEAP*YGSLLEDDGYN
Trigger: ATTATACCCATCATCTTCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGACCTATAAGAGTTCCCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCATGGATTCCCTTTATaGAACTGTACTAGTTACTGC +
Preference number: 3 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNHGFPL*NCTSYC
Trigger: GCAGTAACTAGTACAGTTCAATAAAGGGAATCCATG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CCA 72 bp GAATGGTATGATCTTGGACAAGATTCTGAACTTCTCTaGGATTGTTTTAAGCCACCTAGAATTGAAACTCCA +
Preference number: 3 (lower is better)
Translates to: EWYDLGQDSELL*DCFKPPRIETP
Trigger: TGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAAGATCATACCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGCTGCGGGTGGCGGGTaGGCACGTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVAAGGG*ARASPA
Trigger: AGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGGGRR*AARQLL
Trigger: CAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCGGTGCGTCTGCAGGTaGTCCCGTAGCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVRCVCR*SRSPFS
Trigger: GGAGAACGGGCTACGGGAGCACCTGCAGACGCACCG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCCTGTCCGTTGGCGCTaGGGGCCATGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEPVRWR*GPCSRR
Trigger: GCGCCGGCTGCATGGCCCGCAGCGCCAACGGACAGG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTCGGACAGCTGCGGGTaGCGGGTGAGCACGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVSDSCG*RVSTCF
Trigger: GAAGCACGTGCTCACCCGCCACCCGCAGCTGTCCGA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGGGRR*AARQLL
Trigger: CAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVLAESR*RFGEDT
Trigger: GGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCCAGGTGGCTGTGTTTaGCGTGCACCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVPGGCV*RAPAGQ
Trigger: CTGACCTGCAGGTGCACGTCAAACACAGCCACCTGG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCACACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPHWSPA*GHGGPP
Trigger: AGGTGGACCACCGTGACCTCACGCCGGAGACCAGTG...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGCGGAAGTCCCAGTTaGAGGCCGTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVCGSPS*RPCSGT
Trigger: TGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGGGCCCCGGTGCGTCTaGAGGTGCTCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLGPRCV*RCSRSP
Trigger: CGGGCTACGGGAGCACCTGCAGACGCACCGGGGCCC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCCAGTGCCCTGTGCAGTaGCTGGCACCTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESQCPVQ*LAPGGS
Trigger: GCTGCCCCCAGGTGCCAGGCACTGCACAGGGCACTG...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGGCTCTGCAGCGAGCTaGTGGAGGAGAAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPGSAAS*WRRSRA
Trigger: AGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGCAGCGGCTTCAAGGTaGAGTCCGGGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPAAASR*SPGWSH
Trigger: GTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACAGAGGGGTTGGCGTTaGGGCCGCAGTGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILQRGWR*GRSGRR
Trigger: GCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCAGCCCCTGGCCATTaGGGGAGGACGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAAPGH*GRTPLS
Trigger: GCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGGCTGCGGGTGGCGGGTaGGCACGTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVAAGGG*ARASPA
Trigger: AGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGC...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTGCGGGTGGCGGGTaGGCACGTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAAGGG*ARASPA
Trigger: AGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGTGACGCAACATCCTTaGTGGAGGGAGACGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVVTQHP*WRETRP
Trigger: TGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCAC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCTGCGGGAGAAGGCTaGCTCGCACTCGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEAAGEG*LALVAV
Trigger: CACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCCTTCTCGGACAGCTaGGGGTGGCGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAAFSDS*GWRVST
Trigger: CGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVTRMCS*RLLMSA
Trigger: CGCCGACATCAATAGCCTGCAGGAGCACATCCGCGT...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGCTTCACCGCCAGGTaGACCTGGATGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVCFTAR*TWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGGCTGTGTTTGACGTaGACCTGCAGGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVWLCLT*TCRSAS
Trigger: GGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCGGTGCGTCTGCAGGTaGTCCCGTAGCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGERCVCR*SRSPFS
Trigger: GGAGAACGGGCTACGGGAGCACCTGCAGACGCACCG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGGGCCCCGGTGCGTCTaGAGGTGCTCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCGPRCV*RCSRSP
Trigger: CGGGCTACGGGAGCACCTGCAGACGCACCGGGGCCC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGGCCCCGGTGCGTCTaGAGGTGCTCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGPRCV*RCSRSP
Trigger: CGGGCTACGGGAGCACCTGCAGACGCACCGGGGCCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTGGCGCTGCGGGCCATaGAGCCGGCGCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLWRCGP*SRRRGR
Trigger: ACGGCCTCTGCGCCGGCTGCATGGCCCGCAGCGCCA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVVVRQV*QRLEVL
Trigger: CAGGACTTCGAGTCTCTGGCAGACCTGACGGACCAC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCCCCAGGCCCCTGCCTaGCTCACTCCAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHPQAPA*LTPDLA
Trigger: GGCCAGGTCTGGAGTGAGGCAGGCAGGGGCCTGGGG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGCTCTGCAGCGAGCTaGTGGAGGAGAAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGSAAS*WRRSRA
Trigger: AGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGERWSRV*RCSWRP
Trigger: TGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAPQRR*SRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCAGCGGCTTCAAGGTaGAGTCCGGGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEAAASR*SPGWSH
Trigger: GTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCGTTGGGGCCGCAGTaGGAGACGCGGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRALGPQ*ETRMCS
Trigger: GGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWLQWAC*MCSVRE
Trigger: CTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACACCCACCTGTCCGTTaGCGCTGCGGGCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRHPPVR*RCGPCS
Trigger: GCTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCAGCGGTGGGCCCGGTaGTCCGTCAGGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVQRWAR*SVRSAR
Trigger: TCTGGCAGACCTGACGGACCACCGGGCCCACCGCTG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACAGCGGTGGGCCCGGTaGTCCGTCAGGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRQRWAR*SVRSAR
Trigger: TCTGGCAGACCTGACGGACCACCGGGCCCACCGCTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGGCTCCTCTTGTGCTTaGAGAGGCGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPGSSCA*RGGCSR
Trigger: CCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGTCCCGCAGCCGGTaGTTCTGCAGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWSRSR*FCSSTS
Trigger: GGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGELSLLA*AIILAR
Trigger: CCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCGGAAGCCCGTGAGTaGGTTGCGCAGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAEARE*VAQVRV
Trigger: CACCCTGACCTGCGCAACTCACTCACGGGCTTCCGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACACAGCGGAAGCCCGTaGGTGAGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILHSGSP*VSCAGQ
Trigger: CTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRHWSPA*GHGGPP
Trigger: AGGTGGACCACCGTGACCTCACGCCGGAGACCAGTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCGGGGAAAGCCAACCCTaGAGGGAAAGCCAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVGESQP*RESQED
Trigger: GTCTTCTTGGCTTTCCCTTCAGGGTTGGCTTTCCCC...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTGCGGGAGAAGGCTaGCTCGCACTCGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAAGEG*LALVAV
Trigger: CACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCTGCGGGAGAAGGCTaGCTCGCACTCGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAAAGEG*LALVAV
Trigger: CACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTGGCACTGCCCACACTaGAGTGGGCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWWHCPH*SGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGGTGCGTCTGCAGGTaGTCCCGTAGCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRRCVCR*SRSPFS
Trigger: GGAGAACGGGCTACGGGAGCACCTGCAGACGCACCG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTTGGCAGGGCCCCGGTaGGTCTGCAGGTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHLAGPR*VCRCSR
Trigger: ACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGGGGCATCTTGCAGATaGGACAGGTGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPGASCR*DRCPCP
Trigger: TGGACACGGGCACCTGTCGCATCTGCAAGATGCCCC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCCTGTCCGTTGGCGCTaGGGGCCATGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDPVRWR*GPCSRR
Trigger: GCGCCGGCTGCATGGCCCGCAGCGCCAACGGACAGG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTGGCGATGTCTGGGTaGCTTTCCGGGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLAMSG*LSGAHW
Trigger: CCAGTGGGCCCCGGAAAGGCACCCAGACATCGCCAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCTGGCGATGTCTGGGTaGCTTTCCGGGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVLAMSG*LSGAHW
Trigger: CCAGTGGGCCCCGGAAAGGCACCCAGACATCGCCAG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCCCTGCCTGTTGCAATaGGGCAGTCCGGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTPCLLQ*GSPGLP
Trigger: CGGGAGCCCCGGACTGCCGCATTGCAACAGGCAGGG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGGCGCGCCGGGGCCCTaGCTGTTGCAATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCGAPGP*LLQCGS
Trigger: ACTGCCGCATTGCAACAGGCAGGGCCCCGGCGCGCC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCTGCAGCGAGCTGGTaGAGGAGAAGCCGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESAASW*RRSRAC
Trigger: GCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATCTGCAGCGAGCTGGTaGAGGAGAAGCCGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILSAASW*RRSRAC
Trigger: GCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTCGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLARWSRV*RCSWRP
Trigger: TGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCG...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRRWSRV*RCSWRP
Trigger: TGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSRWSPG*SHAPQR
Trigger: CCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSYRQRG*RWGRSG
Trigger: CCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVYRQRG*RWGRSG
Trigger: CCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGELPTLQ*ACWMCS
Trigger: CGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCCTGGATGGACACCTTaGAGTCGAAGACCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVPGWTP*SRRPPD
Trigger: GTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCACTGGCGATGTCTaGGTGCCTTTCCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGTGDV*VPFRGP
Trigger: TGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCCATGACAGGGGCCTGTaGCCCAAGGGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESHDRGL*PKGPGP
Trigger: TGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATG...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGCTCCTCTTGTGCTTaGAGAGGCGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGSSCA*RGGCSR
Trigger: CCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCGCCCGTATGCAGCTTaGTGTGCCGGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTRPYAA*CAGHGS
Trigger: GGAGCCGTGACCGGCACATCAAGCTGCATACGGGCG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCTCCTCCGTCTGGCTaGAGGTGTCCTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEAPPSG*RCPRSS
Trigger: ACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEKTSGQ*MHCRSA
Trigger: GGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCTTCTCCAGCAGGATaGTGGCGTGGAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEASPAG*WRGRPC
Trigger: GCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSLSLLA*AIILAR
Trigger: CCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAG...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACACAGCGGAAGCCCGTaGGTGAGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRHSGSP*VSCAGQ
Trigger: CTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAACACACGGGGCATTTaGAGGTGCCGCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGENTRGI*RCRPCP
Trigger: AGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGGGCCAGCGAGAAGTCTaGGGCCTCCCCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVGQREV*GLPLFN
Trigger: GTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCC...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACAGCTGGAGAGGGCCCTaGGACGGAGATGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHSWRGP*DGDVAG
Trigger: GCCTGCCACATCTCCGTCTCAGGGCCCTCTCCAGCT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGAGCTGGAGAGGGCCCTaGGACGGAGATGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLSWRGP*DGDVAG
Trigger: GCCTGCCACATCTCCGTCTCAGGGCCCTCTCCAGCT...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATCACGGCTCCTCTTGTaGTTGAAGAGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPSRLLL*LKRRLQ
Trigger: CTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTGGCGGGTGAGCACGTaGTTCTCCAGCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSWRVST*FSSSSV
Trigger: GACGGAGGAGCTGGAGAAGCACGTGCTCACCCGCCA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCATGGAGGCCACGCTaGCCAGTACAGGGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSWRPR*PVQGRD
Trigger: GTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCACCTTGGTCCAGCCCTaGCCGTCATCCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESTLVQP*PSSRIF
Trigger: GAAGATGCGGGATGACGGGCAGGGCTGGACCAAGGT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGETLQWA*WMCSVR
Trigger: CCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGACGAGACTGGGCTCTaGTCGGCCTTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWDETGL*SALDFL
Trigger: CAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGGGCATCTTGCAGATaGGACAGGTGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGASCR*DRCPCP
Trigger: TGGACACGGGCACCTGTCGCATCTGCAAGATGCCCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAGGACGCCGCTGAGCTaGCCGCCAGCTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRRTPLS*PPASAC
Trigger: ACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTGGCGCTGCGGGCCATaGAGCCGGCGCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTWRCGP*SRRRGR
Trigger: ACGGCCTCTGCGCCGGCTGCATGGCCCGCAGCGCCA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGAGCGCGGCTTCGCCTaGTTCCGCCTGGACATGTCC +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLERGFA*FRLDMS
Trigger: GGACATGTCCAGGCGGAAGCAGGCGAAGCCGCGCTC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGACTCCTGTGGCCACTaGCAGCCTGTCCAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEDSCGH*QPVQSA
Trigger: TGCAGACTGGACAGGCTGGCAGTGGCCACAGGAGTC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGCTCCTACCTGGCTCTaGTCTGCAGTCCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILAPTWL*SAVPSH
Trigger: GTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACATCCCCAGTGCCCTGTaGAGTGCCTGGCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHIPSAL*SAWHLG
Trigger: CCCCAGGTGCCAGGCACTGCACAGGGCACTGGGGAT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCTGCAGCGAGCTGGTaGAGGAGAAGCCGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSAASW*RRSRAC
Trigger: GCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESGLTL*LLESGC
Trigger: GCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGTGGCGCTGCTCATaGAGGCCACGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRVWRCS*RPRCPV
Trigger: TACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACAC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLAPQRR*SRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCAGAGGGGTTGGCGTTaGGGCCGCAGTGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLQRGWR*GRSGRR
Trigger: GCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLQWAC*MCSVRE
Trigger: CTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSLPTLQ*ACWMCS
Trigger: CGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAG...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLPTLQ*ACWMCS
Trigger: CGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGGCTCTGCTCGGCCTTaGACTTCTTGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILGSARP*TSCCGP
Trigger: TGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCAGGTGCAGCTTCAGGTaGGTCTGGAAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVRCSFR*VWKLSK
Trigger: CTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACCT...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCACTTGTGAGCCTTaGCCGGGTTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCTCEP*PGCPGG
Trigger: GCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLGVPH*PCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGTTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVLGVPH*PCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAA...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCGCAGCAGCACCTCCATaGTGTAGGCCGCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSAAAPP*CRPPHR
Trigger: TCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCACGCGGCCCTAGGCTaGGGAGGAGAGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTHAALG*GGENQA
Trigger: TGCCTGGTTCTCTCCTCCCCAGCCTAGGGCCGCGTG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCGGTGGGGTTCCCTaGCTGCCTTGTCACCGCCAT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRVGGVP*LPCHRH
Trigger: ATGGCGGTGACAAGGCAGCCAGGGAACCCCACCGAC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATCCATCGCGCCCTCCTaGCTGAAAAGGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILSIAPS*LKRCPP
Trigger: AGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATCCCCGCTGCAACAGTaGTCCTCTTCAGGGGGACAT +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPSPLQQ*SSSGGH
Trigger: ATGTCCCCCTGAAGAGGACCACTGTTGCAGCGGGGA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCTCCTCTTGTGCTTaGAGAGGCGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGSSCA*RGGCSR
Trigger: CCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESSGGS*GGRCGR
Trigger: TCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWVDTFH*GELLRA
Trigger: TGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTAC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGAGTCCAGGCAGATCTaGCATGTGTGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILESRQI*HVWLCW
Trigger: CCAGCAGAGCCACACATGTCAGATCTGCCTGGACTC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGAGTCCAGGCAGATCTaGCATGTGTGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEESRQI*HVWLCW
Trigger: CCAGCAGAGCCACACATGTCAGATCTGCCTGGACTC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGECERAR*GCRGWA
Trigger: TGCCCACCCTCTACAACCTCAACGAGCACGTTCGCA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACCAGGTGGCTGTGTTTaGCGTGCACCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRPGGCV*RAPAGQ
Trigger: CTGACCTGCAGGTGCACGTCAAACACAGCCACCTGG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCAGAAGATGCACTTGTaGGCCTTGGCCGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVQKMHL*ALAGLP
Trigger: GGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCTG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATGGTCCCGCAGCCGGTaGTTCTGCAGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGWSRSR*FCSSTS
Trigger: GGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESPCVR*ASAAKG
Trigger: TCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCGGAAGCCCGTGAGTaGGTTGCGCAGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLAEARE*VAQVRV
Trigger: CACCCTGACCTGCGCAACTCACTCACGGGCTTCCGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLACCGTP*GTGRTC
Trigger: ACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCCGTP*GTGRTC
Trigger: ACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGATGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRCCGTP*GTGRTC
Trigger: ACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCA...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLHWSPA*GHGGPP
Trigger: AGGTGGACCACCGTGACCTCACGCCGGAGACCAGTG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPHWSPA*GHGGPP
Trigger: AGGTGGACCACCGTGACCTCACGCCGGAGACCAGTG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCATCTCCGATCATCTaGGTGGGTGACGCAACATCC +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWPSPII*VGDATS
Trigger: GGATGTTGCGTCACCCACGCAGATGATCGGAGATGG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGTATGCAGCTTGATGTaGCGGTCACGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPVCSLM*RSRLLL
Trigger: CAAGAGGAGCCGTGACCGGCACATCAAGCTGCATAC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGTCGGGTGTGGCGCTaGTCATGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSRVWR*SWRPRC
Trigger: GCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLASRIFF*PRSGFK
Trigger: CTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRTLQWA*WMCSVR
Trigger: CCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGGCACTGCCCACACTaGAGTGGGCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAWHCPH*SGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGCACTGCCCACACTaGAGTGGGCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWHCPH*SGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTACCTCCATGAAGGACTaGGTGGGCTGCACCACCGGA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLATSMKD*VGCTTG
Trigger: TCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTGTTTGACGTGCACCTaGAGGTCAGCCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESCLTCT*RSASLR
Trigger: CCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACA...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATTAAGCAGCATGCCCTaGAGGTCAGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPLSSMP*RSAGSA
Trigger: AGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCAGATGCGACAGGTaGCCGTGTCCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCRCDR*PCPGSC
Trigger: GCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESSRWST*MWLSRS
Trigger: AGACCTGGAGAGCCACATGCAGGTGGACCACCGTGA...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILSRWST*MWLSRS
Trigger: AGACCTGGAGAGCCACATGCAGGTGGACCACCGTGA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTGGCGATGTCTGGGTaGCTTTCCGGGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLAMSG*LSGAHW
Trigger: CCAGTGGGCCCCGGAAAGGCACCCAGACATCGCCAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESDPSL*VLAHRV
Trigger: CACACGATGAGCCAGCACGCACAGTGAGGGATCGCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEVVRQV*QRLEVL
Trigger: CAGGACTTCGAGTCTCTGGCAGACCTGACGGACCAC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCGTCCCCAAGGGCGTGTaGAAGCCCACAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESVPKGV*KPTGTC
Trigger: ACAAGTTCCTGTGGGCTTGCACACGCCCTTGGGGAC...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGACTCCTGTGGCCACTaGCAGCCTGTCCAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLADSCGH*QPVQSA
Trigger: TGCAGACTGGACAGGCTGGCAGTGGCCACAGGAGTC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGAAACCCTTACCTGCCTaGTTCTGGGCACTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWKPLPA*FWALWA
Trigger: TGCCCAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCATCCCCAGTGCCCTGTaGAGTGCCTGGCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCIPSAL*SAWHLG
Trigger: CCCCAGGTGCCAGGCACTGCACAGGGCACTGGGGAT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGGTGGATCTTGAGGTaGTCGCTGCGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGERWILR*SLREKA
Trigger: AGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGGCTTGCTGGAGCTGTaGGTCTTCAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWGLLEL*VFRWIL
Trigger: CAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLRWSPG*SHAPQR
Trigger: CCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCAGCGGCTTCAAGGTaGAGTCCGGGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLAAASR*SPGWSH
Trigger: GTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTGGGGCTTGTCCGCGTaGATGGTCTTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESWGLSA*MVFRWI
Trigger: GATCCACCTGAAGACCATCCACGCGGACAAGCCCCA...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGGGGCTTGTCCGCGTaGATGGTCTTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEWGLSA*MVFRWI
Trigger: GATCCACCTGAAGACCATCCACGCGGACAAGCCCCA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACACATCGGACGAGACTaGGCTCTGCTCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRHIGRD*ALLGLG
Trigger: TCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWHWRWS*RLLRAA
Trigger: AGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCACCGCCAGGTGCACCTaGATGGACACCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSTARCT*MDTLES
Trigger: CGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAACCGCCAGGTGCACCTaGATGGACACCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRTARCT*MDTLES
Trigger: CGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCACCCACCTGTCCGTTaGCGCTGCGGGCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDHPPVR*RCGPCS
Trigger: GCTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTGVRSR*STCMWL
Trigger: GAGCCACATGCAGGTGGACCACCGTGACCTCACGCC...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGCACTGGCGATGTCTaGGTGCCTTTCCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGTGDV*VPFRGP
Trigger: TGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGTGACAGAGGAGCTTaGCCGGGGAGTCGAACATCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGDRGA*PGSRTS
Trigger: AGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCCTCACTGTGCGTGCTaGCTCATCGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEPHCAC*LIVWFC
Trigger: GCAGAACCACACGATGAGCCAGCACGCACAGTGAGG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATCTCCAGGACAGCGGTaGGCCCGGTGGTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRSPGQR*ARWSVR
Trigger: CCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGTGCCACCTGGAGTCCTaGCAAGGGAAGGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVCHLES*QGKGYP
Trigger: TGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGCA...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGATCCCTGGCAGCTTCTaGCTTTGCCATCACGGCACT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWIPGSF*LCHHGT
Trigger: AGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGGGAT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp GCCACCTGGAGTCCTGGCAAGGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACC +
Preference number: 4 (lower is better)
Translates to: ATWSPGKGRATH*PACIQQRGKPT
Trigger: GGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGGCTCCTCTTGTGCTTaGAGAGGCGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLGSSCA*RGGCSR
Trigger: CCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGECTQCT*RACWSC
Trigger: ACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRVQGRD*HCGCWS
Trigger: ACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTAC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGTGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVCERAR*GCRGWA
Trigger: TGCCCACCCTCTACAACCTCAACGAGCACGTTCGCA...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILRNRPP*RTAWAA
Trigger: TGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCT...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGERNRPP*RTAWAA
Trigger: TGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGTCGAAGACCTCCTaGCACAGGGTGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRESKTS*HRVQWY
Trigger: GTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGGCTTCTCCAGCAGGATaGTGGCGTGGAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTASPAG*WRGRPC
Trigger: GCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGC...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLSLLA*AIILAR
Trigger: CCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCACAGCGGAAGCCCGTaGGTGAGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPHSGSP*VSCAGQ
Trigger: CTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCGGCACTCTCAAACTTaGCACTGCACTCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVRHSQT*HCTRGN
Trigger: GTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGCTGTGCTCAATGAGGTaGCAGAGGAGCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLLCSMR*QRSLAG
Trigger: CCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGAACACACGGGGCATTTaGAGGTGCCGCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTNTRGI*RCRPCP
Trigger: AGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTT...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCACGGCTGGTTTTCTaGTCGCACTCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRARLVF*SHSGSP
Trigger: AGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTAGGGGTCTTCTGCTTTaGCTCCTGTGGCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLARGLLL*LLWPLP
Trigger: TGGCAGTGGCCACAGGAGTCAAAGCAGAAGACCCCT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGCAAGTTCTGGCCTCTaGTTGGCAAGTCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILASSGL*LASQLS
Trigger: GCTCAGCTGACTTGCCAATCAGAGGCCAGAACTTGC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATCGCGCCCTCCTGGCTaGAAAGGTGCCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRSRPPG*KGALLQ
Trigger: CTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCATCCAAATGAGAGGCTaGTTCCATCGCGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESIQMRG*FHRALL
Trigger: CAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGAT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTGGGCAGGTGTTCCATaGCAGGGGCCTGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPWAGVP*QGPVAQ
Trigger: TTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCACGGCTCCTCTTGTaGTTGAAGAGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSRLLL*LKRRLQ
Trigger: CTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATTCTTGTCGCCCGTATaGAGCTTGATGTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPFLSPV*SLMCRS
Trigger: TGACCGGCACATCAAGCTGCATACGGGCGACAAGAA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLACMWL*SELVEE
Trigger: CTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTGGCGGGTGAGCACGTaGTTCTCCAGCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCWRVST*FSSSSV
Trigger: GACGGAGGAGCTGGAGAAGCACGTGCTCACCCGCCA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHTLQWA*WMCSVR
Trigger: CCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACTCTAGTTTGGCACTaGCCACACTGCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGETLVWH*PHCSGP
Trigger: AGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAAGGACTGCGTGGGCTaGACCACCGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRKDCVG*TTGDSS
Trigger: ACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGAAAGGACTGCGTGGGCTaGACCACCGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRKDCVG*TTGDSS
Trigger: ACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTAAGGACTGCGTGGGCTaGACCACCGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAKDCVG*TTGDSS
Trigger: ACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGACCTCCATGAAGGACTaGGTGGGCTGCACCACCGGA +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLTSMKD*VGCTTG
Trigger: TCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACGGCCTTGGACTTCTTaGTGTGGGCCAGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILRPWTS*CGPVEC
Trigger: ACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLAESR*RFGEDT
Trigger: GGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCTTCACCGCCAGGTaGACCTGGATGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCFTAR*TWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGATGCTTCACCGCCAGGTaGACCTGGATGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRCFTAR*TWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCA...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGTTTGACGTGCACCTaGAGGTCAGCCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCLTCT*RSASLR
Trigger: CCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHVPHWP*RSRSQH
Trigger: ATGCTGCGACCGAGAACGGCACGGCCAATGGGGTAC...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTTAAGCAGCATGCCCTaGAGGTCAGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGELSSMP*RSAGSA
Trigger: AGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCCGTGTCCAGGCTCTTaGTGTGGGTCACCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEPCPGS*CGSPCV
Trigger: AACACAAGGTGACCCACAGCAAGAGCCTGGACACGG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGTGCAGATGCGACAGGTaGCCGTGTCCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLCRCDR*PCPGSC
Trigger: GCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCA...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGCTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLLPASF*MWKVPW
Trigger: CCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAG...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAAGCTTCACCAGGTCCTaGTTGCTGCGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILSFTRS*LLRNSL
Trigger: CAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCT...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGCTTCACCAGGTCCTaGTTGCTGCGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESFTRS*LLRNSL
Trigger: CAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGATCCCTCACTGTGCGTaGTGGCTCATCGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEIPHCA*WLIVWF
Trigger: GAACCACACGATGAGCCAGCACGCACAGTGAGGGAT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVSDPSL*VLAHRV
Trigger: CACACGATGAGCCAGCACGCACAGTGAGGGATCGCT...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCGACAGTCCCAGCACTaGCCAAAAGGTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTRQSQH*PKGRPG
Trigger: GCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCTGATGGTAAAGAATaGCAGTCCCAGGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWPDGKE*QSQEGP
Trigger: AGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGGAAAAGGTGCCCTCCTaGAGGATGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVEKVPS*RMPGTI
Trigger: GATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTC...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTCCTGGCTGAAAAGGTaGCCTCCTGCAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLASWLKR*PPAGCL
Trigger: CAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACAGGTCTCAAGCCCCTaGCTCAGCAAGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRQVSSP*LSKAFL
Trigger: AAGGAAGGCCTTGCTGAGGCAGGGGCTTGAGACCTG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGELRSSA*VTQHPC
Trigger: GCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGAACTGGCAAGGGTATaGCAGGCCCGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLELARV*QARAPF
Trigger: GAAGGGGGCACGGGCCTGCCATACCCTTGCCAGTTC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCGACTTGTCGCAGAACTaGCAAGGGTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSDLSQN*QGYGRP
Trigger: GGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTC...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACTTGTCGCAGAACTaGCAAGGGTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRDLSQN*QGYGRP
Trigger: GGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILWAWWI*ASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLAWAW*IWASSV
Trigger: CACACTGCTCGCCCATATCCACCAAGCCCACGCCAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAWLAWA*WIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGECFWLA*AWWIWA
Trigger: CGCCCATATCCACCAAGCCCACGCCAACCAGAAACA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGTAGAGGGTGGGCATaGAGTCCAGGCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGECRGWA*SPGRSD
Trigger: GTCAGATCTGCCTGGACTCCATGCCCACCCTCTACA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPLPTLQ*ACWMCS
Trigger: CGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGGATGGAGCCAAAGATaGGGGAGTTGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILGWSQR*GSWCSR
Trigger: CCTACTGCACCAACTCCCCCATCTTTGGCTCCATCC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEHWRWS*RLLRAA
Trigger: AGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAAGTCCTCTTTGCACTaGGGGCACGCTTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRKSSLH*GHACFR
Trigger: GCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGAAGTCCTCTTTGCACTaGGGGCACGCTTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVKSSLH*GHACFR
Trigger: GCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTT...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGAAAGTCCTCTTTGCACTaGGGGCACGCTTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRKSSLH*GHACFR
Trigger: GCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTT...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACACCGCCAGGTGCACCTaGATGGACACCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHTARCT*MDTLES
Trigger: CGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTGCACTTGTGAGCCTTaGCCGGGTTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLCTCEP*PGCPGG
Trigger: GCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLGVPH*PCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILFLGGH*GYPIGR
Trigger: ACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTCAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAQAQLS*WPLGVP
Trigger: GGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGCAGCAGCACCTCCATaGTGTAGGCCGCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCAAAPP*CRPPHR
Trigger: TCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCAGCAGCACCTCCATaGTGTAGGCCGCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLAAAPP*CRPPHR
Trigger: TCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPASFCM*KVPWIL
Trigger: CAAGATCCATGGCACCTTCCACATGCAGAAGCTGGC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGTCCACCTGCATGTaGCTCTCCAGGTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWSTCM*LSRSSA
Trigger: TGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGVRSR*STCMWL
Trigger: GAGCCACATGCAGGTGGACCACCGTGACCTCACGCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCACAGCTTACACTCGTaGTTGATGCCTTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVHSLHS*LMPSSI
Trigger: GATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCTGGCTCATCGTGTaGTTCTGCAGCTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCWLIV*FCSSVW
Trigger: CCAGACCGAGCTGCAGAACCACACGATGAGCCAGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACCTCACTGTGCGTGCTaGCTCATCGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRPHCAC*LIVWFC
Trigger: GCAGAACCACACGATGAGCCAGCACGCACAGTGAGG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCTCACTGTGCGTGCTaGCTCATCGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVPHCAC*LIVWFC
Trigger: GCAGAACCACACGATGAGCCAGCACGCACAGTGAGG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTGCACGTTACCCTTaGGCCTCTGTTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAARYP*ASVSPS
Trigger: GGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCAACCCAAGTGCCACCTaGAGTCCTGGCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSNPSAT*SPGKGR
Trigger: CCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCACTGGCTGTGGATGTGTaGCAGCCTCACTCAGACATA +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPLAVDV*QPHSDI
Trigger: TATGTCTGAGTGAGGCTGCCACACATCCACAGCCAG...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGGGCTCCATGGGGTTTaGGATAAATCCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPGLHGV*DKSRAG
Trigger: TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGTCGGTGGGGTTCCCTaGCTGCCTTGTCACCGCCAT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGVGGVP*LPCHRH
Trigger: ATGGCGGTGACAAGGCAGCCAGGGAACCCCACCGAC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGTGGCCCAAGGGTCCTaGTCCATTTCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGVAQGS*SISQPG
Trigger: CCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCAC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGACATGACAGGGGCCTGTaGCCCAAGGGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGHDRGL*PKGPGP
Trigger: TGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATG...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGCTCCTCTTGTGCTTaGAGAGGCGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGSSCA*RGGCSR
Trigger: CCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCTCCTCCGTCTGGCTaGAGGTGTCCTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLAPPSG*RCPRSS
Trigger: ACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGKTSGQ*MHCRSA
Trigger: GGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCCAGGTGGCTGTGTTTaGCGTGCACCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPPGGCV*RAPAGQ
Trigger: CTGACCTGCAGGTGCACGTCAAACACAGCCACCTGG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGTCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLSPCVR*ASAAKG
Trigger: TCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGA...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGGAAGCCCGTGAGTaGGTTGCGCAGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTAEARE*VAQVRV
Trigger: CACCCTGACCTGCGCAACTCACTCACGGGCTTCCGC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTCAAGCGTGGAAGTaGCTGTCTGCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAQAWK*LSACRP
Trigger: TGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGCGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLRRAAH*RQASPG
Trigger: ACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACG...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTGTGCTCAATGAGGTaGCAGAGGAGCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLCSMR*QRSLAG
Trigger: CCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTGGAAGAAGAACTTCTaGGGGCACTGTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEWKKNF*GHCEQS
Trigger: CGACTGCTCACAGTGCCCTCAGAAGTTCTTCTTCCA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGCACGGCTGGTTTTCTaGTCGCACTCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLARLVF*SHSGSP
Trigger: AGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTATCTATTGGTAGTTACTaGGGGCTCACCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILSIGSY*GLTWAP
Trigger: TGGAGCCCAGGTGAGCCCTCAGTAACTACCAATAGA...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCATCACGGCACTCATaGCCAGGTGTGGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVPSRHS*PGVAMH
Trigger: ATGCATAGCCACACCTGGTCATGAGTGCCGTGATGG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACCATCTCCGATCATCTaGGTGGGTGACGCAACATCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRPSPII*VGDATS
Trigger: GGATGTTGCGTCACCCACGCAGATGATCGGAGATGG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGTCCACTGAGGAGAACTaGTCAGGGCACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTSTEEN*SGHMGH
Trigger: GTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPSRIFF*PRSGFK
Trigger: CTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWETRM*SCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGTLQWA*WMCSVR
Trigger: CCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTGGCACTGCCCACACTaGAGTGGGCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLWHCPH*SGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTACTCTAGTTTGGCACTaGCCACACTGCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLATLVWH*PHCSGP
Trigger: AGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGACCTCCATGAAGGACTaGGTGGGCTGCACCACCGGA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLTSMKD*VGCTTG
Trigger: TCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGGTTCTCCTTGATGTaGTTGGTGAGTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVWFSLM*LVSFRM
Trigger: CATCCTGAAACTCACCAAGCACATCAAGGAGAACCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGGACGAGACTGGGCTCTaGTCGGCCTTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTDETGL*SALDFL
Trigger: CAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTC...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGCAGCAGCTCCAGGTaGAGCTTCAGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGSSSSR*SFRWVW
Trigger: CCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCCCTCCTGACACAGGGTaGAGTGGTACAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESPPDTG*SGTTQR
Trigger: CCTTTGTGTTGTACCACTGCACCCTGTGTCAGGAGG...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTCCCAGTTGCAGGCCGTaGAGCGGTACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAPSCRP*SGTSSS
Trigger: AGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGG...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCTTCTCCCGCAGGTaGTTCTCCAGCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCFSRR*FSSRMM
Trigger: CATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEASNTQ*FSRRCF
Trigger: GAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLVPHWP*RSRSQH
Trigger: ATGCTGCGACCGAGAACGGCACGGCCAATGGGGTAC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGGTGCATCTGGCAGTaGTCAATAAACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGCIWQ*SINSSS
Trigger: CGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCAGCTTCACCAGGTCCTaGTTGCTGCGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSSFTRS*LLRNSL
Trigger: CAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACGGCAAAGATGTGCTaGTGCAACTTGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGETAKMC*CNLLAW
Trigger: CCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAATCCCTCACTGTGCGTaGTGGCTCATCGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRIPHCA*WLIVWF
Trigger: GAACCACACGATGAGCCAGCACGCACAGTGAGGGAT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTATCCCTCACTGTGCGTaGTGGCTCATCGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAIPHCA*WLIVWF
Trigger: GAACCACACGATGAGCCAGCACGCACAGTGAGGGAT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACGCAGGGTCTATTGTGTaGAGGTCCCCAAGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHAGSIV*RSPRAC
Trigger: ACACGCCCTTGGGGACCTGCACACAATAGACCCTGC...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGAAAAGGTGCCCTCCTaGAGGATGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLEKVPS*RMPGTI
Trigger: GATGGTGCCAGGCATCCTGCAGGAGGGCACCTTTTC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAACTGAAACCCTTACCTaGCTGCTTCTGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILTETLT*LLLGTL
Trigger: CAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTTCAGT...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCAGTGCCCTGTGCAGTaGCTGGCACCTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAQCPVQ*LAPGGS
Trigger: GCTGCCCCCAGGTGCCAGGCACTGCACAGGGCACTG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTCCGATCATCTGCGTaGGTGACGCAACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLRSSA*VTQHPC
Trigger: GCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGAGGTGGATCTTGAGGTaGTCGCTGCGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTRWILR*SLREKA
Trigger: AGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCT...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGAGGTGGATCTTGAGGTaGTCGCTGCGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLRWILR*SLREKA
Trigger: AGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCT...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCTTGCTGGAGCTGTaGGTCTTCAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGLLEL*VFRWIL
Trigger: CAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATTGTGGGCCTGCATGTaGCTCTGCAGCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGLWACM*LCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTGTGGGCCTGCATGTaGCTCTGCAGCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLWACM*LCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTCCAGCTCCTCCGTCTaGCTGAAGGTGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSSSSV*LKVSSQ
Trigger: CTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCCAGCTCCTCCGTCTaGCTGAAGGTGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSSSSV*LKVSSQ
Trigger: CTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAWAWWI*ASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHWLAWA*WIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGATGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCG +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRCFWLA*AWWIWA
Trigger: CGCCCATATCCACCAAGCCCACGCCAACCAGAAACA...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSGLTL*LLESGC
Trigger: GCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAAPQRR*SRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTTGTCCGCGTGGATaGTCTTCAGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRACPRG*SSGGSP
Trigger: TGGAGATCCACCTGAAGACCATCCACGCGGACAAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCTTGTCCGCGTGGATaGTCTTCAGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAACPRG*SSGGSP
Trigger: TGGAGATCCACCTGAAGACCATCCACGCGGACAAGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRLQWAC*MCSVRE
Trigger: CTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCAAAGATGGGGGAGTTaGTGCAGTAGGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEQRWGS*CSRGRN
Trigger: ATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRHWRWS*RLLRAA
Trigger: AGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESTPHWR*SWRLLR
Trigger: TCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACCTGGATGGACACCTTaGAGTCGAAGACCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRPGWTP*SRRPPD
Trigger: GTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACCAGGTGCACCTGGATaGACACCTTGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRPGAPG*TPWSRR
Trigger: TCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGACCGCCAGGTGCACCTaGATGGACACCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLTARCT*MDTLES
Trigger: CGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGATGTGGAAGGTGCCATaGATCTTGAGCTCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWMWKVP*ILSSSV
Trigger: CACGCTTGAGCTCAAGATCCATGGCACCTTCCACAT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEASFCM*KVPWIL
Trigger: CAAGATCCATGGCACCTTCCACATGCAGAAGCTGGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGGCACTGGCGATGTCTaGGTGCCTTTCCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTGTGDV*VPFRGP
Trigger: TGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACACCCAGGAGAGTTGTaGGTCGTCATCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRHPGEL*VVITIS
Trigger: GGAGATGGTGATGACGACCCACAACTCTCCTGGGTG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCACTGATCTCTATGACTaGGAACCTGCGGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESTDLYD*EPAAPT
Trigger: GGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAATCCCTGGCAGCTTCTaGCTTTGCCATCACGGCACT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRIPGSF*LCHHGT
Trigger: AGTGCCGTGATGGCAAAGCCAGAAGCTGCCAGGGAT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp CCTGCTGCGTGGCCTTGGGAAAGCTGCACGTTACCCTaGGGCCTCTGTTTCCCCATCCAAGAGTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PAAWPWESCTLP*GLCFPIQEWED
Trigger: ATCTTCCCACTCTTGGATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCTTTCCCAAGGCCACGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCGCCCGTATGCAGCTTaGTGTGCCGGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVARPYAA*CAGHGS
Trigger: GGAGCCGTGACCGGCACATCAAGCTGCATACGGGCG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGAGTCCAGGCAGATCTaGCATGTGTGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLESRQI*HVWLCW
Trigger: CCAGCAGAGCCACACATGTCAGATCTGCCTGGACTC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGAGTCCAGGCAGATCTaGCATGTGTGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCESRQI*HVWLCW
Trigger: CCAGCAGAGCCACACATGTCAGATCTGCCTGGACTC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGAPAGY*CRRTSR
Trigger: CCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLRRAAH*RQASPG
Trigger: ACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTTCTGAGGGCACTGTaGGCAGTCGTAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRLLRAL*AVVDLV
Trigger: GACAAGATCTACGACTGCTCACAGTGCCCTCAGAAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGAAGAAGAACTTCTaGGGGCACTGTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWKKNF*GHCEQS
Trigger: CGACTGCTCACAGTGCCCTCAGAAGTTCTTCTTCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGCACGGCTGGTTTTCTaGTCGCACTCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCARLVF*SHSGSP
Trigger: AGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTCATTTCTCTCCTCTTaGCTTGTCACGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWSFLSS*LVTLFL
Trigger: CAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGGGGAAAGCCAACCCTaGAGGGAAAGCCAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLGESQP*RESQED
Trigger: GTCTTCTTGGCTTTCCCTTCAGGGTTGGCTTTCCCC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPFPCPL*KVSKEG
Trigger: CCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTCACCAGAAGCCCCTTaGTATGGGAGTCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWSPEAP*YGSLLE
Trigger: TTCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCCATCTCCGATCATCTaGGTGGGTGACGCAACATCC +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHPSPII*VGDATS
Trigger: GGATGTTGCGTCACCCACGCAGATGATCGGAGATGG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTCACGGCTCCTCTTGTaGTTGAAGAGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSRLLL*LKRRLQ
Trigger: CTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTCCACTGAGGAGAACTaGTCAGGGCACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSTEEN*SGHMGH
Trigger: GTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCAGTCGGGTGTGGCGCTaGTCATGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVASRVWR*SWRPRC
Trigger: GCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACT...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLTRMCS*RLLMSA
Trigger: CGCCGACATCAATAGCCTGCAGGAGCACATCCGCGT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAAGGACTGCGTGGGCTaGACCACCGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLKDCVG*TTGDSS
Trigger: ACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCAGTCAAAGTCCTCTTTaGACTGGGGGCACGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSSQSPL*TGGTLA
Trigger: AGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCCACCGAGGAAAATTaGTTGTCGCAGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSTEEN*LSQLSH
Trigger: GTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATGCGGAAGTCCCAGTTaGAGGCCGTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRCGSPS*RPCSGT
Trigger: TGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATGGCTGTGTTTGACGTaGACCTGCAGGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGWLCLT*TCRSAS
Trigger: GGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTGGCTGTGTTTGACGTaGACCTGCAGGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLWLCLT*TCRSAS
Trigger: GGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTGCTTCTCCCGCAGGTaGTTCTCCAGCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHCFSRR*FSSRMM
Trigger: CATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAASNTQ*FSRRCF
Trigger: GAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDVPHWP*RSRSQH
Trigger: ATGCTGCGACCGAGAACGGCACGGCCAATGGGGTAC...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCCGTGTCCAGGCTCTTaGTGTGGGTCACCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTPCPGS*CGSPCV
Trigger: AACACAAGGTGACCCACAGCAAGAGCCTGGACACGG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGTGCATCTGGCAGTaGTCAATAAACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGCIWQ*SINSSS
Trigger: CGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSRWST*MWLSRS
Trigger: AGACCTGGAGAGCCACATGCAGGTGGACCACCGTGA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAAKMCC*NLLAWT
Trigger: CGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCACGGCAAAGATGTaGTGCTGCAACTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCTAKM*CCNLLA
Trigger: GGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLVVRQV*QRLEVL
Trigger: CAGGACTTCGAGTCTCTGGCAGACCTGACGGACCAC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGCAGGGTCTATTGTGTaGAGGTCCCCAAGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGAGSIV*RSPRAC
Trigger: ACACGCCCTTGGGGACCTGCACACAATAGACCCTGC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGGAAGGGTTTCCCCGTaGAAGTTCTGGCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAGRVSP*KFWPLI
Trigger: AATCAGAGGCCAGAACTTGCACGGGGAAACCCTTCC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTTACAGGTCTCTGTGTaGAGCCCTTTGTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESLQVSV*SPLSGI
Trigger: GATGCCTGACAAAGGGCTGCACACAGAGACCTGTAA...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTLRSSA*VTQHPC
Trigger: GCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGCAGCTTGTCGCTGTaGATCTGCTCGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGSLSL*ICSCLF
Trigger: GAAGAGGCACGAGCAGATCCACAGCGACAAGCTGCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTTCCTTCTCCGACTTaGCCAGATGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGELPSPT*PDAPCS
Trigger: AGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTCGGACAGCTGCGGGTaGCGGGTGAGCACGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVASDSCG*RVSTCF
Trigger: GAAGCACGTGCTCACCCGCCACCCGCAGCTGTCCGA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCGHLCF*LAWAWW
Trigger: CCACCAAGCCCACGCCAACCAGAAACACAAGTGCCC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTPETLV*HCPHCS
Trigger: ACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACAAAGATGGGGGAGTTaGTGCAGTAGGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRQRWGS*CSRGRN
Trigger: ATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGGATGGAGCCAAAGATaGGGGAGTTGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLGWSQR*GSWCSR
Trigger: CCTACTGCACCAACTCCCCCATCTTTGGCTCCATCC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTACTTGCTGTGGGCCAGTaGAATGTTCTTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILLAVGQ*NVLVVL
Trigger: GAGAACCACAAGAACATTCCACTGGCCCACAGCAAG...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGCTTCAGGTGGGTCTaGAAGCTCTCAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESFRWV*KLSKLE
Trigger: CTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLQAQLS*WPLGVP
Trigger: GGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVASFCM*KVPWIL
Trigger: CAAGATCCATGGCACCTTCCACATGCAGAAGCTGGC...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCTTTTTCCGGGGCACTaGCGATGTCTGGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHLFPGH*RCLGAF
Trigger: AAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGTGACAGAGGAGCTTaGCCGGGGAGTCGAACATCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGDRGA*PGSRTS
Trigger: AGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCTCACTGTGCGTGCTaGCTCATCGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLPHCAC*LIVWFC
Trigger: GCAGAACCACACGATGAGCCAGCACGCACAGTGAGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTAACCCAAGTGCCACCTaGAGTCCTGGCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPNPSAT*SPGKGR
Trigger: CCTTCCCTTGCCAGGACTCCAGGTGGCACTTGGGTT...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCACTTAGAGGAACACTaGTGTCTACCCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEHLEEH*CLPWGL
Trigger: AAGACCCCAGGGTAGACACCAGTGTTCCTCTAAGTG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACTGGCTGTGGATGTGTaGCAGCCTCACTCAGACATA +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRLAVDV*QPHSDI
Trigger: TATGTCTGAGTGAGGCTGCCACACATCCACAGCCAG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGAGGGACCACATCTGCTaGTCATCTCCTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVRDHIC*SSPYPQ
Trigger: CTGGGGATAAGGAGATGACCAGCAGATGTGGTCCCT...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGATCATCTGCGTGGGTaGCGCAACATCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPDHLRG*RNILAG
Trigger: TCCAGCAAGGATGTTGCGTCACCCACGCAGATGATC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGATCATCTGCGTGGGTaGCGCAACATCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGDHLRG*RNILAG
Trigger: TCCAGCAAGGATGTTGCGTCACCCACGCAGATGATC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPCTQCT*RACWSC
Trigger: ACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCCTCCGTCTGGCTaGAGGTGTCCTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTAPPSG*RCPRSS
Trigger: ACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAACTTGAGGTCGCATTaGTTGCAAGGATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGENLRSH*LQGYSP
Trigger: TGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTCTCCAGCAGGATaGTGGCGTGGAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTASPAG*WRGRPC
Trigger: GCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGGAGAGGTGTCCTGTTaGGCGATCCCTCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTGEVSC*AIPHCA
Trigger: CGCACAGTGAGGGATCGCTCAACAGGACACCTCTCC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAGGGGTCTTCTGCTTTaGCTCCTGTGGCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDRGLLL*LLWPLP
Trigger: TGGCAGTGGCCACAGGAGTCAAAGCAGAAGACCCCT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGCAAGTTCTGGCCTCTaGTTGGCAAGTCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPASSGL*LASQLS
Trigger: GCTCAGCTGACTTGCCAATCAGAGGCCAGAACTTGC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCACGTGAGAACATTACATaGGGTGACAGAAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPRENIT*GDRKKG
Trigger: CCCTTTCTTTCTGTCACCTCATGTAATGTTCTCACG...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCATCTCCGATCATCTaGGTGGGTGACGCAACATCC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLPSPII*VGDATS
Trigger: GGATGTTGCGTCACCCACGCAGATGATCGGAGATGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTGCTGCGGGAGAAGGCTaGCTCGCACTCGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLAAGEG*LALVAV
Trigger: CACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGC...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCCTTCTCGGACAGCTaGGGGTGGCGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAFSDS*GWRVST
Trigger: CGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTCATGGAGGCCACGCTaGCCAGTACAGGGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVASWRPR*PVQGRD
Trigger: GTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRGRQRC*QTASQG
Trigger: ACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRTRMCS*RLLMSA
Trigger: CGCCGACATCAATAGCCTGCAGGAGCACATCCGCGT...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGACTCTAGTTTGGCACTaGCCACACTGCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLTLVWH*PHCSGP
Trigger: AGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTGGTTCTCCTTGATGTaGTTGGTGAGTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWWFSLM*LVSFRM
Trigger: CATCCTGAAACTCACCAAGCACATCAAGGAGAACCA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTAGCAGCAGCTCCAGGTaGAGCTTCAGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSSSSR*SFRWVW
Trigger: CCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCT...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATGCTTCTCCCGCAGGTaGTTCTCCAGCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGCFSRR*FSSRMM
Trigger: CATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGGCAGGGCCCCGGTaGGTCTGCAGGTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLAGPR*VCRCSR
Trigger: ACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCVEVTV*MQTTQR
Trigger: CCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCAC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPVEVTV*MQTTQR
Trigger: CCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCAC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCTGTCCGTTGGCGCTaGGGGCCATGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPVRWR*GPCSRR
Trigger: GCGCCGGCTGCATGGCCCGCAGCGCCAACGGACAGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCGCCACCAGTCTCAATaGTCTCACATCCTACTGATC +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVRHQSQ*SHILLI
Trigger: GATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGGAAGGGTTTCCCCGTaGAAGTTCTGGCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLGRVSP*KFWPLI
Trigger: AATCAGAGGCCAGAACTTGCACGGGGAAACCCTTCC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAGTGGGGTTCCCTGGCTaGCTTGTCACCGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRVGFPG*LVTAIN
Trigger: GTTTATGGCGGTGACAAGGCAGCCAGGGAACCCCAC...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTCCTGGCTGAAAAGGTaGCCTCCTGCAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDSWLKR*PPAGCL
Trigger: CAGGCATCCTGCAGGAGGGCACCTTTTCAGCCAGGA...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGAACTGGCAAGGGTATaGCAGGCCCGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAELARV*QARAPF
Trigger: GAAGGGGGCACGGGCCTGCCATACCCTTGCCAGTTC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGCTTGCTGGAGCTGTaGGTCTTCAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGLLEL*VFRWIL
Trigger: CAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCTTCCTTCTCCGACTTaGCCAGATGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSLPSPT*PDAPCS
Trigger: AGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAG...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGETCVSG*RGLGGY
Trigger: ATATCCACCAAGCCCACGCCAACCAGAAACACAAGT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSGLTL*LLESGC
Trigger: GCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLRWSPG*SHAPQR
Trigger: CCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCT...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGCTTGTCCGCGTGGATaGTCTTCAGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLACPRG*SSGGSP
Trigger: TGGAGATCCACCTGAAGACCATCCACGCGGACAAGC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTAAGGATACTCCCCATTaGAGATGGAGTTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAKDTPH*RWSWRL
Trigger: CAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAAGGATACTCCCCATTaGAGATGGAGTTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRKDTPH*RWSWRL
Trigger: CAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCAGGTGCACCTGGATaGACACCTTGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLPGAPG*TPWSRR
Trigger: TCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGCAGGATGATGGCGTaGAAGGCCTTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSRMMA*KALLQN
Trigger: GTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLFLGGH*GYPIGR
Trigger: ACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCATGTGGAAGGTGCCATaGATCTTGAGCTCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSMWKVP*ILSSSV
Trigger: CACGCTTGAGCTCAAGATCCATGGCACCTTCCACAT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGCACTTGATGCACTaGTATGTCTTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWHLMH*YVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCTCAATCATGTGGTTaGCAACGTGGATTTGGATCT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWPQSCG*QRGFGS
Trigger: AGATCCAAATCCACGTTGCCAACCACATGATTGAGG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATGCTGGCTCATCGTGTaGTTCTGCAGCTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRCWLIV*FCSSVW
Trigger: CCAGACCGAGCTGCAGAACCACACGATGAGCCAGCA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCTCCAGGACAGCGGTaGGCCCGGTGGTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSPGQR*ARWSVR
Trigger: CCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCCTGAGACGGAGATGTaGCAGGCCCCGGGACATACT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTPETEM*QAPGHT
Trigger: AGTATGTCCCGGGGCCTGCCACATCTCCGTCTCAGG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACAGGGACCACATCTGCTaGTCATCTCCTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHRDHIC*SSPYPQ
Trigger: CTGGGGATAAGGAGATGACCAGCAGATGTGGTCCCT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHSSSSG*RTCRRT
Trigger: AGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLSSSSG*RTCRRT
Trigger: AGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACT...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCGCCCGTATGCAGCTTaGTGTGCCGGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRPYAA*CAGHGS
Trigger: GGAGCCGTGACCGGCACATCAAGCTGCATACGGGCG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEQSWRT*GRIDCK
Trigger: CTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGTCCCGCAGCCGGTaGTTCTGCAGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWSRSR*FCSSTS
Trigger: GGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGAGAAGAAAGTCCGTaGACAAACGTTGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRREESP*TNVALV
Trigger: CACAAGTGCAACGTTTGTTCACGGACTTTCTTCTCG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGGGRR*AARQLL
Trigger: CAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCTTACACTCGTGGTTaGTGCCTTCCTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRAYTRG*CLPQSC
Trigger: ACATGATTGAGGAAGGCATCAACCACGAGTGTAAGC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGGAACATTACATGAGGTaGCAGAAAGAAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWEHYMR*QKERGT
Trigger: AGTTCCCCTTTCTTTCTGTCACCTCATGTAATGTTC...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTCTATTGGTAGTTACTaGGGGCTCACCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSIGSY*GLTWAP
Trigger: TGGAGCCCAGGTGAGCCCTCAGTAACTACCAATAGA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCGGGGGCCTCACATaGCGGGCTCGGCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPGGLT*RARQTG
Trigger: TCCCGTCTGCCGAGCCCGTCATGTGAGGCCCCCGGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTCTTGTCGCCCGTATaGAGCTTGATGTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCFLSPV*SLMCRS
Trigger: TGACCGGCACATCAAGCTGCATACGGGCGACAAGAA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTCTTTTTGTGGGCCTaGATGTGGCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLFFLWA*MWLCSE
Trigger: CTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGCTGGAGTCGGGCTaGCGGTGGCTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLLESG*RWLSRW
Trigger: CCACCTGGACAGCCACCGGCAGCCCGACTCCAGCAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGTCGGGTGTGGCGCTaGTCATGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSRVWR*SWRPRC
Trigger: GCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDWETRM*SCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCA...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGATGGGGGAGTTGGTaGAGTAGGGGCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGRWGSW*SRGRNR
Trigger: TCTATTCCTGCCCCTACTGCACCAACTCCCCCATCT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGTCAAAGTCCTCTTTaGACTGGGGGCACGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSQSPL*TGGTLA
Trigger: AGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGCGTGGAAGGCCTTaGTGCAGAACTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWRGRP*CRTYSY
Trigger: ATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATTAAGCAGCATGCCCTaGAGGTCAGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRLSSMP*RSAGSA
Trigger: AGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCGGTGCGTCTGCAGGTaGTCCCGTAGCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRCVCR*SRSPFS
Trigger: GGAGAACGGGCTACGGGAGCACCTGCAGACGCACCG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGCCCCGGTGCGTCTaGAGGTGCTCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGPRCV*RCSRSP
Trigger: CGGGCTACGGGAGCACCTGCAGACGCACCGGGGCCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLRRSG*IWQCSI
Trigger: TATTGAGCACTGCCAGATGCACCCTGACCTGCGCAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPLRRSG*IWQCSI
Trigger: TATTGAGCACTGCCAGATGCACCCTGACCTGCGCAA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVALPASF*MWKVPW
Trigger: CCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAGTCGAACATCTGGTTaGACAGCTTACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSRTSG*TAYTRG
Trigger: ACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAACGGCAAAGATGTGCTaGTGCAACTTGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGTAKMC*CNLLAW
Trigger: CCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTGCACGGCAAAGATGTaGTGCTGCAACTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCCTAKM*CCNLLA
Trigger: GGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTGCACGGCAAAGATGTaGTGCTGCAACTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLCTAKM*CCNLLA
Trigger: GGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGAAGGGCTACCCACTTaGCTGCCTGTATCCAACAAA +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLEGLPT*LPVSNK
Trigger: TTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGTCACACATCTCCGTaGCTCAGAACCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSHTSP*LRTQVP
Trigger: TGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGCTCCTACCTGGCTCTaGTCTGCAGTCCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAAPTWL*SAVPSH
Trigger: GTGACTGGGGACTGCAGAGCAGAGCCAGGTAGGAGC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAAAACCCTTACCTGCCTaGTTCTGGGCACTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRKPLPA*FWALWA
Trigger: TGCCCAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTT...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAATTTACTGGCATGCTTaGCTGTGCCACTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGIYWHA*LCHCGL
Trigger: GAGGCCACAGTGGCACAGGCAAGCATGCCAGTAAAT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCCAGCTCACGGCTTCTaGATTTGCAGTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QAPASARPSLMHPCVSYTPAHGF*ICSVLF
Trigger: GAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGGGCAGGCGAGGGCTaGAGAGGCGCTTCCCACCGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRAGEG*RGASHR
Trigger: CCGGTGGGAAGCGCCTCTCCAGCCCTCGCCTGCCCT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACGGCTTGCTGGAGCTGTaGGTCTTCAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDGLLEL*VFRWIL
Trigger: CAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCC...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGCTCTGCAGCGAGCTaGTGGAGGAGAAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGSAAS*WRRSRA
Trigger: AGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCTTCCTTCTCCGACTTaGCCAGATGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHLPSPT*PDAPCS
Trigger: AGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTGTAGAGGGTGGGCATaGAGTCCAGGCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDCRGWA*SPGRSD
Trigger: GTCAGATCTGCCTGGACTCCATGCCCACCCTCTACA...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPKPMEH*LQKKAL
Trigger: TAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTT...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCAAAGATGGGGGAGTTaGTGCAGTAGGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLQRWGS*CSRGRN
Trigger: ATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCTTGCTGTGGGCCAGTaGAATGTTCTTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHLAVGQ*NVLVVL
Trigger: GAGAACCACAAGAACATTCCACTGGCCCACAGCAAG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCTPHWR*SWRLLR
Trigger: TCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCAGGTGCACCTGGATaGACACCTTGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRPGAPG*TPWSRR
Trigger: TCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTGCACTTGTGAGCCTTaGCCGGGTTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLCTCEP*PGCPGG
Trigger: GCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLLGVPH*PCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTQAQLS*WPLGVP
Trigger: GGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCAGCCCCTGGCCATTaGGGGAGGACGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAAPGH*GRTPLS
Trigger: GCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGAATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRMWLAT*IWISLS
Trigger: CGAGAGAGAGATCCAAATCCACGTTGCCAACCACAT...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACCTTCCTCAATCATGTaGTTGGCAACGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRPSSIM*LATWIW
Trigger: CCAAATCCACGTTGCCAACCACATGATTGAGGAAGG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGGGGAGTCGAACATCTaGTTGCACAGCTTACACTCG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCGESNI*LHSLHS
Trigger: CGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGGGAGTCGAACATCTaGTTGCACAGCTTACACTCG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGESNI*LHSLHS
Trigger: CGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGCAACTTGTTGGCCTaGACGAAGACTGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRCNLLA*TKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTTCCAGCGCACGGCTaGTTTTCTGATCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRLPAHG*FSDRTL
Trigger: CAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCGCAACAGCCCACTACTaGCAGGGTCTGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCATAHY*QGLLYD
Trigger: ATCATAGAGCAGACCCTGCCAGTAGTGGGCTGTTGC...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGCAACAGCCCACTACTaGCAGGGTCTGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPATAHY*QGLLYD
Trigger: ATCATAGAGCAGACCCTGCCAGTAGTGGGCTGTTGC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCCAGGAGGCTGAAAATTaGCATTCACAGCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESQEAEN*HSQPSV
Trigger: AACTGAAGGCTGTGAATGCCAATTTTCAGCCTCCTG...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACACTGGTGTCTACCCTaGGGTCTTCCCCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRHWCLP*GLPPKL
Trigger: CAGTTTTGGGGGAAGACCCCAGGGTAGACACCAGTG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTCCATCGCGCCCTCCTaGCTGAAAAGGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVASIAPS*LKRCPP
Trigger: AGGAGGGCACCTTTTCAGCCAGGAGGGCGCGATGGA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATCTTCCCACTGCTCTTaGACTGCCCACCTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGSSHCS*TAHLPY
Trigger: ATAAGGGAGGTGGGCAGTCCAAGAGCAGTGGGAAGA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp AGCCCTACGCCACCAACCGTCAAATCGAATCTTCTATaGGTAGTTACTGAGGGCTCACCTGGGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: SPTPPTVKSNLL*VVTEGSPGLHG
Trigger: CCCATGGAGCCCAGGTGAGCCCTCAGTAACTACCAATAGAAGATTCGATTTGACGGTTGGTGGCGTAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp TACTTCTGGCTCGTTTCCAGCTCACGGCTTCTGCATTaGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: YFWLVSSSRLLH*QCSLPTALGLP
Trigger: GGGCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAAACGAGCCAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCTGCGGGTGGCGGGTaGGCACGTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAAGGG*ARASPA
Trigger: AGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAVQGRD*HCGCWS
Trigger: ACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTAC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACAAACGTTGCACTTGTaGCTGCCCTTGATAAACTCA +
Preference number: 4 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRQTLHL*LPLINS
Trigger: TGAGTTTATCAAGGGCAGTCACAAGTGCAACGTTTG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGGGRR*AARQLL
Trigger: CAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSRSSGT*CTGMSF
Trigger: AAAAGACATACCAGTGCATCAAGTGCCAGATGACCT...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACGCTTACACTCGTGGTTaGTGCCTTCCTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHAYTRG*CLPQSC
Trigger: ACATGATTGAGGAAGGCATCAACCACGAGTGTAAGC...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTTTCCTTGCCCCTTGTaGAAAGTTAGCAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHFPCPL*KVSKEG
Trigger: CCCTTCCTTGCTAACTTTTCACAAGGGGCAAGGAAA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAAGGCCCCTCACAGTTaGAAGGCAAGTGTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDKAPHS*KASVSS
Trigger: GGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGAGGAAGGGATGGATTTaGGTTTTGGTCCTATTTACT +
Preference number: 4 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWRKGWI*VLVLFT
Trigger: AGTAAATAGGACCAAAACTCAAATCCATCCCTTCCT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTACTTGCTGAATGGATaGGTAGAGGAAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSYLLNG*VEEGMD
Trigger: ATCCATCCCTTCCTCTACTCATCCATTCAGCAAGTA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHSDLAR*SLFFLW
Trigger: CCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGCGGGTGAGCACGTaGTTCTCCAGCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWRVST*FSSSSV
Trigger: GACGGAGGAGCTGGAGAAGCACGTGCTCACCCGCCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPGRQRC*QTASQG
Trigger: ACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLGRQRC*QTASQG
Trigger: ACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGTTCTCCTTGATGTaGTTGGTGAGTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRWFSLM*LVSFRM
Trigger: CATCCTGAAACTCACCAAGCACATCAAGGAGAACCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLAESR*RFGEDT
Trigger: GGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATCCACCGAGGAAAATTaGTTGTCGCAGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRSTEEN*LSQLSH
Trigger: GTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCCCAGTTGCAGGCCGTaGAGCGGTACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTPSCRP*SGTSSS
Trigger: AGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGTGGAAGGCCTTGCTaGAGAACTTACAGTTATACT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRRGRPC*RTYSYT
Trigger: AGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATTGGCAGGGCCCCGGTaGGTCTGCAGGTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLAGPR*VCRCSR
Trigger: ACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTGCAGATGCGACAGGTaGCCGTGTCCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLCRCDR*PCPGSC
Trigger: GCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGGACGCCGCTGAGCTaGCCGCCAGCTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRTPLS*PPASAC
Trigger: ACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGGCGCTGCGGGCCATaGAGCCGGCGCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIWRCGP*SRRRGR
Trigger: ACGGCCTCTGCGCCGGCTGCATGGCCCGCAGCGCCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCAACTGTACTAGTTACTaGAGTCAGATTAAGTCACAT +
Preference number: 4 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVNCTSY*SQIKSH
Trigger: ATGTGACTTAATCTGACTGCAGTAACTAGTACAGTT...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAGTCACACATCTCCGTaGCTCAGAACCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDSHTSP*LRTQVP
Trigger: TGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCCAGGCCCCTGCCTaGCTCACTCCAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPQAPA*LTPDLA
Trigger: GGCCAGGTCTGGAGTGAGGCAGGCAGGGGCCTGGGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGTCTTCCCCCAAAACTaGCAGGTCTCCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAVFPQN*QVSRRL
Trigger: CAGCCTCCTGGAGACCTGGCAGTTTTGGGGGAAGAC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTACAGGTCTCTGTGTaGAGCCCTTTGTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCLQVSV*SPLSGI
Trigger: GATGCCTGACAAAGGGCTGCACACAGAGACCTGTAA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTGCCCTCCTGCAGGATaGCTGGCACCATCATTGATG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTCPPAG*LAPSLM
Trigger: CATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTACGCAACATCCTTGCTaGAGGGAGACGAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLTQHPC*RETRPP
Trigger: GGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGT...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCTGCAGCGAGCTGGTaGAGGAGAAGCCGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSAASW*RRSRAC
Trigger: GCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTTGTGGGCCTGCATGTaGCTCTGCAGCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLLWACM*LCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTTCCTTCTCCGACTTaGCCAGATGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLPSPT*PDAPCS
Trigger: AGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHTCVSG*RGLGGY
Trigger: ATATCCACCAAGCCCACGCCAACCAGAAACACAAGT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTGTGGCGCTGCTCATaGAGGCCACGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVWRCS*RPRCPV
Trigger: TACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCGTTGGGGCCGCAGTaGGAGACGCGGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVALGPQ*ETRMCS
Trigger: GGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESKPMEH*LQKKAL
Trigger: TAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCAGTGGAATGTTCTTGTaGTTCTCCTTGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESSGMFL*FSLMCL
Trigger: CAAGCACATCAAGGAGAACCACAAGAACATTCCACT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTTGCTGTGGGCCAGTaGAATGTTCTTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLLAVGQ*NVLVVL
Trigger: GAGAACCACAAGAACATTCCACTGGCCCACAGCAAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGCTTCAGGTGGGTCTaGAAGCTCTCAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGSFRWV*KLSKLE
Trigger: CTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGCTTCAGGTGGGTCTaGAAGCTCTCAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSFRWV*KLSKLE
Trigger: CTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGCTTCAGGTGGGTCTaGAAGCTCTCAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSFRWV*KLSKLE
Trigger: CTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAGGTGCAGCTTCAGGTaGGTCTGGAAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDRCSFR*VWKLSK
Trigger: CTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACCT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCATAGTGGGTCGACGTaGTCATGTAATGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHHSGST*SCNALS
Trigger: TGACAGTGCATTACATGACCACGTCGACCCACTATG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGCATAGTGGGTCGACGTaGTCATGTAATGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GRATHLPACIQQRGKPTLHSGST*SCNALS
Trigger: TGACAGTGCATTACATGACCACGTCGACCCACTATG...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCAGCCCCTGGCCATTaGGGGAGGACGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLAAPGH*GRTPLS
Trigger: GCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTTCTCGAAGGTCATCTaGCACTTGATGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSFSKVI*HLMHWY
Trigger: ATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCACTGTCCGGTGAACTaGCAAATCCAATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LISMTGNLRLLPGSALQSHCPVN*QIQSKH
Trigger: ATGCTTTGATTGGATTTGCCAGTTCACCGGACAGTG...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCCACTTAGAGGAACACTaGTGTCTACCCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCHLEEH*CLPWGL
Trigger: AAGACCCCAGGGTAGACACCAGTGTTCCTCTAAGTG...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTGCCCCAGTCCACGGGTaGGCACACTTAGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLAPVHG*AHLEEH
Trigger: GTGTTCCTCTAAGTGTGCCCACCCGTGGACTGGGGC...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCCTGAGACGGAGATGTaGCAGGCCCCGGGACATACT +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLPETEM*QAPGHT
Trigger: AGTATGTCCCGGGGCCTGCCACATCTCCGTCTCAGG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp AGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTaGACTCCTGTGGCCACTGCCAGCCTGTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RSGYSIIKGSSA*TPVATASLSSL
Trigger: CAGACTGGACAGGCTGGCAGTGGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAAGAGGGCCAGAACCTaGGCCCGGGTTCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVKRART*ARVPST
Trigger: GGTGCTGGGAACCCGGGCTCAGGTTCTGGCCCTCTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR TCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVACTQCT*RACWSC
Trigger: ACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCTGCGGGTGGCGGGTaGGCACGTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKAAGGG*ARASPA
Trigger: AGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGAGTTGGCGCTTGCTaGGAGCCGCTGCCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGVGAC*EPLPLR
Trigger: CCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGAGTTGGCGCTTGCTaGGAGCCGCTGCCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGVGAC*EPLPLR
Trigger: CCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGAGTTGGCGCTTGCTaGGAGCCGCTGCCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGVGAC*EPLPLR
Trigger: CCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHQSWRT*GRIDCK
Trigger: CTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCCAGGTGGCTGTGTTTaGCGTGCACCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTPGGCV*RAPAGQ
Trigger: CTGACCTGCAGGTGCACGTCAAACACAGCCACCTGG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCAGAAGATGCACTTGTaGGCCTTGGCCGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTQKMHL*ALAGLP
Trigger: GGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCTG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCCGTP*GTGRTC
Trigger: ACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLRRAAH*RQASPG
Trigger: ACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCGGCACTCTCAAACTTaGCACTGCACTCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLRHSQT*HCTRGN
Trigger: GTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAACACACGGGGCATTTaGAGGTGCCGCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTNTRGI*RCRPCP
Trigger: AGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGAGAGGTGTCCTGTTaGGCGATCCCTCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGEVSC*AIPHCA
Trigger: CGCACAGTGAGGGATCGCTCAACAGGACACCTCTCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCTCCAGTCACCACCTaGCGATTTCTGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAPVTT*RFLRPP
Trigger: AGGGGGCCTCAGAAATCGTCAGGTGGTGACTGGAGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562871.5
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAATCGCAGGTGTAAATTaGTTCATCCTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRIAGVN*FILHVF
Trigger: GAAGACATGGAGGATGAATCAATTTACACCTGCGAT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTTAATCACTGTCCGGTaGACTGGCAAATCCAATCAA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLALITVR*TGKSNQ
Trigger: TTGATTGGATTTGCCAGTTCACCGGACAGTGATTAA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAACATTACATGAGGTaGCAGAAAGAAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRREHYMR*QKERGT
Trigger: AGTTCCCCTTTCTTTCTGTCACCTCATGTAATGTTC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTAAAGCCAAATCCAAATaGGAGGCTGATTCCATCGCG +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPKAKSK*EADSIA
Trigger: CGCGATGGAATCAGCCTCTCATTTGGATTTGGCTTT...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCAGGAAGGGATGGATTTaGGTTTTGGTCCTATTTACT +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESRKGWI*VLVLFT
Trigger: AGTAAATAGGACCAAAACTCAAATCCATCCCTTCCT...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCTCTTGGACAAGATTCTaGACTTCTCTGGGATTGTTT +
Preference number: 4 (lower is better)
Translates to: QSPVTHLRASEPKCHLESSWTRF*TSLGLF
Trigger: AAACAATCCCAGAGAAGTTCAGAATCTTGTCCAAGA...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATTTCTCTCTGACCTTTaGAAAGGCCACTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGFLSDL*KGHWGR
Trigger: TCTTCCCCAGTGGCCTTTTCAAAGGTCAGAGAGAAA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCCTTCTCGGACAGCTaGGGGTGGCGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALAFSDS*GWRVST
Trigger: CGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCCTTCTCGGACAGCTaGGGGTGGCGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKAFSDS*GWRVST
Trigger: CGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCCTTCTCGGACAGCTaGGGGTGGCGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLAFSDS*GWRVST
Trigger: CGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGACCTTGGTCCAGCCCTaGCCGTCATCCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTTLVQP*PSSRIF
Trigger: GAAGATGCGGGATGACGGGCAGGGCTGGACCAAGGT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGCAGCAGCTCCAGGTaGAGCTTCAGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSSSSR*SFRWVW
Trigger: CCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGCGGAAGTCCCAGTTaGAGGCCGTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCGSPS*RPCSGT
Trigger: TGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTGTTTGACGTGCACCTaGAGGTCAGCCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLCLTCT*RSASLR
Trigger: CCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTGGCAGGGCCCCGGTaGGTCTGCAGGTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLAGPR*VCRCSR
Trigger: ACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCCGTGTCCAGGCTCTTaGTGTGGGTCACCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAPCPGS*CGSPCV
Trigger: AACACAAGGTGACCCACAGCAAGAGCCTGGACACGG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGCAGATGCGACAGGTaGCCGTGTCCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCRCDR*PCPGSC
Trigger: GCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCTGCAGGGGCATCTTaGAGATGCGACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSAGAS*RCDRCP
Trigger: CGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACTGGCGATGTCTGGGTaGCTTTCCGGGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLAMSG*LSGAHW
Trigger: CCAGTGGGCCCCGGAAAGGCACCCAGACATCGCCAG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGTCGAACATCTGGTTaGACAGCTTACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGSRTSG*TAYTRG
Trigger: ACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLASRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGCAGACCATCCAGTTaGACTGAAACCGATTATATT +
Preference number: 4 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESRPSS*TETDYI
Trigger: AATATAATCGGTTTCAGTGCAACTGGATGGTCTGCT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGCGGGGCCCTGCCTGTTaGAATGCGGCAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRRGPAC*NAAVRG
Trigger: GCCCCGGACTGCCGCATTGCAACAGGCAGGGCCCCG...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCGACAGTCCCAGCACTaGCCAAAAGGTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRQSQH*PKGRPG
Trigger: GCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACACGGCTTCTGCATTTaGAGTGTTCTCTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRHGFCI*SVLFPL
Trigger: CAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCCAGCTCCTCCGTCTaGCTGAAGGTGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSSSSV*LKVSSQ
Trigger: CTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLTCVSG*RGLGGY
Trigger: ATATCCACCAAGCCCACGCCAACCAGAAACACAAGT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRWSRV*RCSWRP
Trigger: TGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRWSPG*SHAPQR
Trigger: CCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTGTAGAGGGTGGGCATaGAGTCCAGGCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVACRGWA*SPGRSD
Trigger: GTCAGATCTGCCTGGACTCCATGCCCACCCTCTACA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCGTTGGGGCCGCAGTaGGAGACGCGGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLALGPQ*ETRMCS
Trigger: GGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACAGAGGGGTTGGCGTTaGGGCCGCAGTGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLQRGWR*GRSGRR
Trigger: GCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAPETLV*HCPHCS
Trigger: ACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAGTGGAATGTTCTTGTaGTTCTCCTTGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CNVQMALPTASPASLLRRSGMFL*FSLMCL
Trigger: CAAGCACATCAAGGAGAACCACAAGAACATTCCACT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAAGGATACTCCCCATTaGAGATGGAGTTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDKDTPH*RWSWRL
Trigger: CAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGCAGCCCCTGGCCATTaGGGGAGGACGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIAAPGH*GRTPLS
Trigger: GCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCACCCACCTGTCCGTTaGCGCTGCGGGCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALHPPVR*RCGPCS
Trigger: GCTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGCACTGGCGATGTCTaGGTGCCTTTCCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGTGDV*VPFRGP
Trigger: TGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTGCAACTTGTTGGCCTaGACGAAGACTGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPCNLLA*TKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCAGCGGTGGGCCCGGTaGTCCGTCAGGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALQRWAR*SVRSAR
Trigger: TCTGGCAGACCTGACGGACCACCGGGCCCACCGCTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCTCCAGGACAGCGGTaGGCCCGGTGGTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSPGQR*ARWSVR
Trigger: CCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACCCGGTTGGCGGCTGTaGGGAGCGGACCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKPGWRL*GADRRS
Trigger: GGACCTGCGGTCCGCTCCCCACAGCCGCCAACCGGG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCGCCTGCTTCCGCCTaGACATGTCCGGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSPASA*TCPGLR
Trigger: CCGGAGCCCCGGACATGTCCAGGCGGAAGCAGGCGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCGGATGCTAATCGCATaGATTCCCTTTATTGAACTG +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVRMLIA*IPFIEL
Trigger: CAGTTCAATAAAGGGAATCCATGCGATTAGCATCCG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACGCCCGTATGCAGCTTaGTGTGCCGGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKRPYAA*CAGHGS
Trigger: GGAGCCGTGACCGGCACATCAAGCTGCATACGGGCG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVQGRD*HCGCWS
Trigger: ACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAPAGY*CRRTSR
Trigger: CCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCAGAAGATGCACTTGTaGGCCTTGGCCGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNQKMHL*ALAGLP
Trigger: GGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCTG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGTCCCGCAGCCGGTaGTTCTGCAGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWSRSR*FCSSTS
Trigger: GGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGGTCCCGCAGCCGGTaGTTCTGCAGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLWSRSR*FCSSTS
Trigger: GGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCCAAACGTTGCACTTGTaGCTGCCCTTGATAAACTCA +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCQTLHL*LPLINS
Trigger: TGAGTTTATCAAGGGCAGTCACAAGTGCAACGTTTG...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCGGCACTCTCAAACTTaGCACTGCACTCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRHSQT*HCTRGN
Trigger: GTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALHWSPA*GHGGPP
Trigger: AGGTGGACCACCGTGACCTCACGCCGGAGACCAGTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCRSSGT*CTGMSF
Trigger: AAAAGACATACCAGTGCATCAAGTGCCAGATGACCT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGAGAGGTGTCCTGTTaGGCGATCCCTCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGEVSC*AIPHCA
Trigger: CGCACAGTGAGGGATCGCTCAACAGGACACCTCTCC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGCCAGCGAGAAGTCTaGGGCCTCCCCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGQREV*GLPLFN
Trigger: GTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTACTTGCTGAATGGATaGGTAGAGGAAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLYLLNG*VEEGMD
Trigger: ATCCATCCCTTCCTCTACTCATCCATTCAGCAAGTA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCTGCGGGAGAAGGCTaGCTCGCACTCGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKAAGEG*LALVAV
Trigger: CACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVACMWL*SELVEE
Trigger: CTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGCTGGAGTCGGGCTaGCGGTGGCTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLLESG*RWLSRW
Trigger: CCACCTGGACAGCCACCGGCAGCCCGACTCCAGCAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTGCTGGAGTCGGGCTaGCGGTGGCTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLLESG*RWLSRW
Trigger: CCACCTGGACAGCCACCGGCAGCCCGACTCCAGCAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATTGCTGGAGTCGGGCTaGCGGTGGCTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLLESG*RWLSRW
Trigger: CCACCTGGACAGCCACCGGCAGCCCGACTCCAGCAA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGTCGGGTGTGGCGCTaGTCATGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSRVWR*SWRPRC
Trigger: GCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTTRMCS*RLLMSA
Trigger: CGCCGACATCAATAGCCTGCAGGAGCACATCCGCGT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGCTTCACCGCCAGGTaGACCTGGATGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCFTAR*TWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTTCTTCTCATTGCTGTaGTTCACCGCCAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAFFSLL*FTARCT
Trigger: GGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGTTTGACGTGCACCTaGAGGTCAGCCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCLTCT*RSASLR
Trigger: CCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGCTGTGTTTGACGTaGACCTGCAGGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWLCLT*TCRSAS
Trigger: GGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATGGCGTGGAAGGCCTTaGTGCAGAACTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRWRGRP*CRTYSY
Trigger: ATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTGGCAGGGCCCCGGTaGGTCTGCAGGTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILAGPR*VCRCSR
Trigger: ACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGTCCTCCTGCCCGTaGACGGCAAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLSSCP*TAKMCC
Trigger: GCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCCCTGTCCAGTCTGCATaGATTAGGTTACTACGATTC +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCPVQSA*IRLLRF
Trigger: GAATCGTAGTAACCTAATGCATGCAGACTGGACAGG...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTCTTCCCCCAAAACTaGCAGGTCTCCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVFPQN*QVSRRL
Trigger: CAGCCTCCTGGAGACCTGGCAGTTTTGGGGGAAGAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTGCCAGGGACCACATCTaGTGGTCATCTCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLARDHI*WSSPYP
Trigger: GGGATAAGGAGATGACCAGCAGATGTGGTCCCTGGC...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCACGGCTTCTGCATTTaGAGTGTTCTCTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTHGFCI*SVLFPL
Trigger: CAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGACTTGTCGCAGAACTaGCAAGGGTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTDLSQN*QGYGRP
Trigger: GGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGGTGGATCTTGAGGTaGTCGCTGCGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRWILR*SLREKA
Trigger: AGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGCTCTGCAGCGAGCTaGTGGAGGAGAAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGSAAS*WRRSRA
Trigger: AGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCGGACAGCTGCGGGTaGCGGGTGAGCACGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSDSCG*RVSTCF
Trigger: GAAGCACGTGCTCACCCGCCACCCGCAGCTGTCCGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCGGACAGCTGCGGGTaGCGGGTGAGCACGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSDSCG*RVSTCF
Trigger: GAAGCACGTGCTCACCCGCCACCCGCAGCTGTCCGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGHLCF*LAWAWW
Trigger: CCACCAAGCCCACGCCAACCAGAAACACAAGTGCCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRWSRV*RCSWRP
Trigger: TGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAAPQRR*SRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIAPQRR*SRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRWSPG*SHAPQR
Trigger: CCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCAGCGGCTTCAAGGTaGAGTCCGGGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALAAASR*SPGWSH
Trigger: GTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCAGCGGCTTCAAGGTaGAGTCCGGGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLAAASR*SPGWSH
Trigger: GTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACAGAGGGGTTGGCGTTaGGGCCGCAGTGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAQRGWR*GRSGRR
Trigger: GCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLYRQRG*RWGRSG
Trigger: CCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALYRQRG*RWGRSG
Trigger: CCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCACTTGTGAGCCTTaGCCGGGTTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCTCEP*PGCPGG
Trigger: GCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTAGCAGGATGATGGCGTaGAAGGCCTTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLSRMMA*KALLQN
Trigger: GTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCT...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGCTTCTGCAGCCCCTaGCCATTGGGGGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSFCSP*PLGEDA
Trigger: GGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGCTTCTGCAGCCCCTaGCCATTGGGGGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSFCSP*PLGEDA
Trigger: GGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACACCCACCTGTCCGTTaGCGCTGCGGGCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAHPPVR*RCGPCS
Trigger: GCTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGTCCACCTGCATGTaGCTCTCCAGGTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWSTCM*LSRSSA
Trigger: TGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGCACTGGCGATGTCTaGGTGCCTTTCCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGTGDV*VPFRGP
Trigger: TGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGTTCTCGAAGGTCATCTaGCACTTGATGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLFSKVI*HLMHWY
Trigger: ATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAA...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRMWLAT*IWISLS
Trigger: CGAGAGAGAGATCCAAATCCACGTTGCCAACCACAT...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCTCAATCATGTGGTTaGCAACGTGGATTTGGATCT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLPQSCG*QRGFGS
Trigger: AGATCCAAATCCACGTTGCCAACCACATGATTGAGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCCTTCCTCAATCATGTaGTTGGCAACGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDPSSIM*LATWIW
Trigger: CCAAATCCACGTTGCCAACCACATGATTGAGGAAGG...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCACTGTCCGGTGAACTaGCAAATCCAATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLHCPVN*QIQSKH
Trigger: ATGCTTTGATTGGATTTGCCAGTTCACCGGACAGTG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTGATTCTGAACTTCTCTaGGATTGTTTTAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLADSELL*DCFKPP
Trigger: AGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATC...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGATCATCTGCGTGGGTaGCGCAACATCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTDHLRG*RNILAG
Trigger: TCCAGCAAGGATGTTGCGTCACCCACGCAGATGATC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCTCCTCCGTCTGGCTaGAGGTGTCCTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAPPSG*RCPRSS
Trigger: ACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVDTFH*GELLRA
Trigger: TGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATTGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNCERAR*GCRGWA
Trigger: TGCCCACCCTCTACAACCTCAACGAGCACGTTCGCA...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGAGTCGAAGACCTCCTaGCACAGGGTGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNESKTS*HRVQWY
Trigger: GTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCAGGTGGCTGTGTTTaGCGTGCACCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPGGCV*RAPAGQ
Trigger: CTGACCTGCAGGTGCACGTCAAACACAGCCACCTGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLSLLA*AIILAR
Trigger: CCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACACAGCGGAAGCCCGTaGGTGAGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHSGSP*VSCAGQ
Trigger: CTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACACAGCGGAAGCCCGTaGGTGAGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHSGSP*VSCAGQ
Trigger: CTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCTCAAGCGTGGAAGTaGCTGTCTGCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAQAWK*LSACRP
Trigger: TGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACTGTGCTCAATGAGGTaGCAGAGGAGCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLCSMR*QRSLAG
Trigger: CCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAACACACGGGGCATTTaGAGGTGCCGCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVNTRGI*RCRPCP
Trigger: AGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCTTCTGAGGGCACTGTaGGCAGTCGTAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLLLRAL*AVVDLV
Trigger: GACAAGATCTACGACTGCTCACAGTGCCCTCAGAAG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCATCGCAGGTGTAAATTaGTTCATCCTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCIAGVN*FILHVF
Trigger: GAAGACATGGAGGATGAATCAATTTACACCTGCGAT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGATCGCAGGTGTAAATTaGTTCATCCTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLIAGVN*FILHVF
Trigger: GAAGACATGGAGGATGAATCAATTTACACCTGCGAT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTACCATCCAGTTGCACTaGAACCGATTATATTCATTA +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLATIQLH*NRLYSL
Trigger: TAATGAATATAATCGGTTTCAGTGCAACTGGATGGT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGATGGATTCCCTTTATTaGACTGTACTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVMDSLY*TVLVTA
Trigger: TGCAGTAACTAGTACAGTTCAATAAAGGGAATCCAT...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTCGCGCCCTCCTGGCTaGAAAGGTGCCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRSRPPG*KGALLQ
Trigger: CTGCAGGAGGGCACCTTTTCAGCCAGGAGGGCGCGA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGGCAGGTGTTCCATaGCAGGGGCCTGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWAGVP*QGPVAQ
Trigger: TTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALACMWL*SELVEE
Trigger: CTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGGCGGGTGAGCACGTaGTTCTCCAGCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKWRVST*FSSSSV
Trigger: GACGGAGGAGCTGGAGAAGCACGTGCTCACCCGCCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCATGGAGGCCACGCTaGCCAGTACAGGGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSWRPR*PVQGRD
Trigger: GTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCATGGAGGCCACGCTaGCCAGTACAGGGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSWRPR*PVQGRD
Trigger: GTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWETRM*SCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCCATGGAGCACTGGTTaGAGAAGAAAGCATTATTAC +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPPWSTG*RRKHYY
Trigger: GTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAACCTCCATGAAGGACTaGGTGGGCTGCACCACCGGA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVTSMKD*VGCTTG
Trigger: TCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLAESR*RFGEDT
Trigger: GGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVVPHWP*RSRSQH
Trigger: ATGCTGCGACCGAGAACGGCACGGCCAATGGGGTAC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACGGTGCGTCTGCAGGTaGTCCCGTAGCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIARCVCR*SRSPFS
Trigger: GGAGAACGGGCTACGGGAGCACCTGCAGACGCACCG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGGGCATCTTGCAGATaGGACAGGTGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGASCR*DRCPCP
Trigger: TGGACACGGGCACCTGTCGCATCTGCAAGATGCCCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCTGCAGGGGCATCTTaGAGATGCGACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSAGAS*RCDRCP
Trigger: CGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGGACGCCGCTGAGCTaGCCGCCAGCTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKRTPLS*PPASAC
Trigger: ACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGTGGGGTTCCCTGGCTaGCTTGTCACCGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNVGFPG*LVTAIN
Trigger: GTTTATGGCGGTGACAAGGCAGCCAGGGAACCCCAC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTTTATAACCCTACACTaGTCCCCAACCCTAATACCA +
Preference number: 4 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPFITLH*SPTLIP
Trigger: TGGTATTAGGGTTGGGGAGCAGTGTAGGGTTATAAA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTACTGAAACCCTTACCTaGCTGCTTCTGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLTETLT*LLLGTL
Trigger: CAGAGTGCCCAGAAGCAGGCAGGTAAGGGTTTCAGT...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCCCACTGCTCTTGGACTaGCCACCTCCCTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAPLLLD*PPPLFL
Trigger: AAGAAATAAGGGAGGTGGGCAGTCCAAGAGCAGTGG...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLRSSA*VTQHPC
Trigger: GCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGAACTGGCAAGGGTATaGCAGGCCCGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLELARV*QARAPF
Trigger: GAAGGGGGCACGGGCCTGCCATACCCTTGCCAGTTC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCCAGCTCCTCCGTCTaGCTGAAGGTGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSSSSV*LKVSSQ
Trigger: CTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWAWWI*ASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSGLTL*LLESGC
Trigger: GCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGTGTGGCGCTGCTCATaGAGGCCACGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALVWRCS*RPRCPV
Trigger: TACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACAC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACATGTGTGGCTCTGCTaGGGCTTGTCCGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVHVWLC*GLSAWM
Trigger: CATCCACGCGGACAAGCCCCAGCAGAGCCACACATG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIYRQRG*RWGRSG
Trigger: CCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLQWAC*MCSVRE
Trigger: CTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLQWAC*MCSVRE
Trigger: CTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLPTLQ*ACWMCS
Trigger: CGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGATGGAGCCAAAGATaGGGGAGTTGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGWSQR*GSWCSR
Trigger: CCTACTGCACCAACTCCCCCATCTTTGGCTCCATCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGTGGAATGTTCTTGTaGTTCTCCTTGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLSGMFL*FSLMCL
Trigger: CAAGCACATCAAGGAGAACCACAAGAACATTCCACT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGTGGAATGTTCTTGTaGTTCTCCTTGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSGMFL*FSLMCL
Trigger: CAAGCACATCAAGGAGAACCACAAGAACATTCCACT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGCTCTGCTCGGCCTTaGACTTCTTGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGSARP*TSCCGP
Trigger: TGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACACATCGGACGAGACTaGGCTCTGCTCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVHIGRD*ALLGLG
Trigger: TCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGCACTTGTGAGCCTTaGCCGGGTTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLCTCEP*PGCPGG
Trigger: GCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLGVPH*PCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTFLGGH*GYPIGR
Trigger: ACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCAGCAGCACCTCCATaGTGTAGGCCGCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKAAAPP*CRPPHR
Trigger: TCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSRLLL*VTLCSV
Trigger: CACCGAACACAAGGTGACCCACAGCAAGAGCCTGGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGAGCTTCTGCAGCCCCTaGCCATTGGGGGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRSFCSP*PLGEDA
Trigger: GGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCT...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGVRSR*STCMWL
Trigger: GAGCCACATGCAGGTGGACCACCGTGACCTCACGCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGVRSR*STCMWL
Trigger: GAGCCACATGCAGGTGGACCACCGTGACCTCACGCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTGGGGAGTCGAACATCTaGTTGCACAGCTTACACTCG +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLGESNI*LHSLHS
Trigger: CGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGTGACAGAGGAGCTTaGCCGGGGAGTCGAACATCT +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGDRGA*PGSRTS
Trigger: AGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCCCCAGTCCACGGGTaGGCACACTTAGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAPVHG*AHLEEH
Trigger: GTGTTCCTCTAAGTGTGCCCACCCGTGGACTGGGGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGCCCCGGGACATACTaGTCCCATCGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGPGTY*SHRQSQ
Trigger: CTGGGACTGTCGATGGGACCAGTATGTCCCGGGGCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGCCCCGGGACATACTaGTCCCATCGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGPGTY*SHRQSQ
Trigger: CTGGGACTGTCGATGGGACCAGTATGTCCCGGGGCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSRPFL*KGLVSS
Trigger: AGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGTGGCCCAAGGGTCCTaGTCCATTTCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKVAQGS*SISQPG
Trigger: CCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCAC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCTCAAGGGGCCTCCTaGAACACCCTCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALAQGAS*NTLPEH
Trigger: GTGCTCTGGGAGGGTGTTCCAGGAGGCCCCTTGAGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSSGGS*GGRCGR
Trigger: TCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCTCCTCCGTCTGGCTaGAGGTGTCCTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALAPPSG*RCPRSS
Trigger: ACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKKTSGQ*MHCRSA
Trigger: GGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLKTSGQ*MHCRSA
Trigger: GGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCERAR*GCRGWA
Trigger: TGCCCACCCTCTACAACCTCAACGAGCACGTTCGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAPAGY*CRRTSR
Trigger: CCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNRNRPP*RTAWAA
Trigger: TGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCT...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGAGTCGAAGACCTCCTaGCACAGGGTGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVESKTS*HRVQWY
Trigger: GTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACAGAAGATGCACTTGTaGGCCTTGGCCGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKQKMHL*ALAGLP
Trigger: GGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCTTCTCCAGCAGGATaGTGGCGTGGAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLASPAG*WRGRPC
Trigger: GCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCTTCTCCAGCAGGATaGTGGCGTGGAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKASPAG*WRGRPC
Trigger: GCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILSLLA*AIILAR
Trigger: CCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLCCGTP*GTGRTC
Trigger: ACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRRAAH*RQASPG
Trigger: ACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCTTCTGAGGGCACTGTaGGCAGTCGTAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLLRAL*AVVDLV
Trigger: GACAAGATCTACGACTGCTCACAGTGCCCTCAGAAG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGAGAGGTGTCCTGTTaGGCGATCCCTCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGEVSC*AIPHCA
Trigger: CGCACAGTGAGGGATCGCTCAACAGGACACCTCTCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATTAATCACTGTCCGGTaGACTGGCAAATCCAATCAA +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRLITVR*TGKSNQ
Trigger: TTGATTGGATTTGCCAGTTCACCGGACAGTGATTAA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATATCCAAATGAGAGGCTaGTTCCATCGCGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNIQMRG*FHRALL
Trigger: CAGGAGGGCGCGATGGAATCAGCCTCTCATTTGGAT...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAAAATTAGTCACCTGTaGTACTCAAGTAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCKISHL*YSSRGL
Trigger: CAAACCCCTACTTGAGTATCACAGGTGACTAATTTT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGCAAACTGGCCGATaGCAAGAGGGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGQTGR*QEGQNL
Trigger: CAGGTTCTGGCCCTCTTGGCATCGGCCAGTTTGCCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCACCATCTTTCCCCCTaGTCACCAGGGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHHLSP*SPGRPR
Trigger: CCTGGGACGCCCTGGTGAGCAGGGGGAAAGATGGTG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCACGGCTCCTCTTGTaGTTGAAGAGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSRLLL*LKRRLQ
Trigger: CTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRACMWL*SELVEE
Trigger: CTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCCACTGAGGAGAACTaGTCAGGGCACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSTEEN*SGHMGH
Trigger: GTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSRIFF*PRSGFK
Trigger: CTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSRIFF*PRSGFK
Trigger: CTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACCTTGGTCCAGCCCTaGCCGTCATCCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTLVQP*PSSRIF
Trigger: GAAGATGCGGGATGACGGGCAGGGCTGGACCAAGGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALTLQWA*WMCSVR
Trigger: CCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACCTCCATGAAGGACTaGGTGGGCTGCACCACCGGA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTSMKD*VGCTTG
Trigger: TCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCGGCCTTGGACTTCTTaGTGTGGGCCAGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNRPWTS*CGPVEC
Trigger: ACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCTTCACCGCCAGGTaGACCTGGATGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCFTAR*TWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGCGGAAGTCCCAGTTaGAGGCCGTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCGSPS*RPCSGT
Trigger: TGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGCTGTGTTTGACGTaGACCTGCAGGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWLCLT*TCRSAS
Trigger: GGAGGCTGACCTGCAGGTGCACGTCAAACACAGCCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTASNTQ*FSRRCF
Trigger: GAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGCAGATGCGACAGGTaGCCGTGTCCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKCRCDR*PCPGSC
Trigger: GCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGGCATCTTGCAGATaGGACAGGTGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGASCR*DRCPCP
Trigger: TGGACACGGGCACCTGTCGCATCTGCAAGATGCCCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCTGCAGGGGCATCTTaGAGATGCGACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSAGAS*RCDRCP
Trigger: CGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGGTGCATCTGGCAGTaGTCAATAAACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGCIWQ*SINSSS
Trigger: CGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLRRSG*IWQCSI
Trigger: TATTGAGCACTGCCAGATGCACCCTGACCTGCGCAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLPASF*MWKVPW
Trigger: CCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLPASF*MWKVPW
Trigger: CCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGGACGCCGCTGAGCTaGCCGCCAGCTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIRTPLS*PPASAC
Trigger: ACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAKMCC*NLLAWT
Trigger: CGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGCAGACCATCCAGTTaGACTGAAACCGATTATATT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSRPSS*TETDYI
Trigger: AATATAATCGGTTTCAGTGCAACTGGATGGTCTGCT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTAACTGTACTAGTTACTaGAGTCAGATTAAGTCACAT +
Preference number: 4 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLANCTSY*SQIKSH
Trigger: ATGTGACTTAATCTGACTGCAGTAACTAGTACAGTT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCCTGTCCAGTCTGCATaGATTAGGTTACTACGATTC +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTPVQSA*IRLLRF
Trigger: GAATCGTAGTAACCTAATGCATGCAGACTGGACAGG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGCTACCCACTTGCCTaGCTGTATCCAACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGYPLA*LYPTKG
Trigger: CCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTGAAGGGCTACCCACTTaGCTGCCTGTATCCAACAAA +
Preference number: 4 (lower is better)
Translates to: DFSHDSFSTETETLTCLLEGLPT*LPVSNK
Trigger: TTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTC...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCCTCAGAACCCAAGTaGCACCTGGAGTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVASEPK*HLESWQ
Trigger: TTGCCAGGACTCCAGGTGGCACTTGGGTTCTGAGGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCGTCCCAGGGCAAACTaGCCGATGCCAAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIRPRAN*PMPRGP
Trigger: TGGCCCTCTTGGCATCGGCCAGTTTGCCCTGGGACG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACGCAACATCCTTGCTaGAGGGAGACGAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTQHPC*RETRPP
Trigger: GGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGAACTGGCAAGGGTATaGCAGGCCCGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIELARV*QARAPF
Trigger: GAAGGGGGCACGGGCCTGCCATACCCTTGCCAGTTC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGACTTGTCGCAGAACTaGCAAGGGTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVDLSQN*QGYGRP
Trigger: GGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGCAGCTTGTCGCTGTaGATCTGCTCGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGSLSL*ICSCLF
Trigger: GAAGAGGCACGAGCAGATCCACAGCGACAAGCTGCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCTGTGGGTCTTCAGGTaGATCTTGAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNLWVFR*ILRWSL
Trigger: CAGCGACCACCTCAAGATCCACCTGAAGACCCACAG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGTGGGCCTGCATGTaGCTCTGCAGCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLWACM*LCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLAWAW*IWASSV
Trigger: CACACTGCTCGCCCATATCCACCAAGCCCACGCCAA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWLAWA*WIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSGLTL*LLESGC
Trigger: GCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTGTGGCGCTGCTCATaGAGGCCACGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVWRCS*RPRCPV
Trigger: TACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGGGCTTGTCCGCGTaGATGGTCTTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWGLSA*MVFRWI
Trigger: GATCCACCTGAAGACCATCCACGCGGACAAGCCCCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATGTGTGGCTCTGCTaGGGCTTGTCCGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHVWLC*GLSAWM
Trigger: CATCCACGCGGACAAGCCCCAGCAGAGCCACACATG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGCTCTGCTCGGCCTTaGACTTCTTGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGSARP*TSCCGP
Trigger: TGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGCTCTGCTCGGCCTTaGACTTCTTGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGSARP*TSCCGP
Trigger: TGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACACATCGGACGAGACTaGGCTCTGCTCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHIGRD*ALLGLG
Trigger: TCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCACATCGGACGAGACTaGGCTCTGCTCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALHIGRD*ALLGLG
Trigger: TCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGGTGCAGCTTCAGGTaGGTCTGGAAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRCSFR*VWKLSK
Trigger: CTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACCT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAAGTCCTCTTTGCACTaGGGGCACGCTTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVKSSLH*GHACFR
Trigger: GCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCACCGCCAGGTGCACCTaGATGGACACCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALTARCT*MDTLES
Trigger: CGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGCAGCAGCACCTCCATaGTGTAGGCCGCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAAAAPP*CRPPHR
Trigger: TCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTASFCM*KVPWIL
Trigger: CAAGATCCATGGCACCTTCCACATGCAGAAGCTGGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGVRSR*STCMWL
Trigger: GAGCCACATGCAGGTGGACCACCGTGACCTCACGCC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCTTTTTCCGGGGCACTaGCGATGTCTGGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNLFPGH*RCLGAF
Trigger: AAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCACTGGTGTCTACCCTaGGGTCTTCCCCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNHWCLP*GLPPKL
Trigger: CAGTTTTGGGGGAAGACCCCAGGGTAGACACCAGTG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCTGCTGATTCCCACATaGCGTGAAAAGCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTLLIPT*REKLLN
Trigger: GTTTAAGAGCTTTTCACGCCATGTGGGAATCAGCAG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSSGGS*GGRCGR
Trigger: TCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSSGGS*GGRCGR
Trigger: TCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSSGGS*GGRCGR
Trigger: TCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCTQCT*RACWSC
Trigger: ACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVVDTFH*GELLRA
Trigger: TGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTAC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLVQGRD*HCGCWS
Trigger: ACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTAC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKAPAGY*CRRTSR
Trigger: CCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALAPAGY*CRRTSR
Trigger: CCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGAGTCGAAGACCTCCTaGCACAGGGTGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKESKTS*HRVQWY
Trigger: GTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSPCVR*ASAAKG
Trigger: TCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSPCVR*ASAAKG
Trigger: TCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCTCAAGCGTGGAAGTaGCTGTCTGCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVAQAWK*LSACRP
Trigger: TGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRRAAH*RQASPG
Trigger: ACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACGGCACTCTCAAACTTaGCACTGCACTCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKRHSQT*HCTRGN
Trigger: GTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCGGCACTCTCAAACTTaGCACTGCACTCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRHSQT*HCTRGN
Trigger: GTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACTGTGCTCAATGAGGTaGCAGAGGAGCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALCSMR*QRSLAG
Trigger: CCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCTGTGCTCAATGAGGTaGCAGAGGAGCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILCSMR*QRSLAG
Trigger: CCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAACACACGGGGCATTTaGAGGTGCCGCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIANTRGI*RCRPCP
Trigger: AGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGAGAGGTGTCCTGTTaGGCGATCCCTCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGEVSC*AIPHCA
Trigger: CGCACAGTGAGGGATCGCTCAACAGGACACCTCTCC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGCCGGCTTCGCTGCTaGTTCCCACATGGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSRLRC*FPHGVK
Trigger: TTTCACGCCATGTGGGAATCAGCAGCGAAGCCGGCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAGAGCCGCTAGAAACTaGCAATTTGTACATCTAAAT +
Preference number: 4 (lower is better)
Translates to: IGCNVQMALPTASPASLLRAARN*QFVHLN
Trigger: ATTTAGATGTACAAATTGTCAGTTTCTAGCGGCTCT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAGAGCCGCTAGAAACTaGCAATTTGTACATCTAAAT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGRAARN*QFVHLN
Trigger: ATTTAGATGTACAAATTGTCAGTTTCTAGCGGCTCT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCACGGCTCCTCTTGTaGTTGAAGAGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSRLLL*LKRRLQ
Trigger: CTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCCACTGAGGAGAACTaGTCAGGGCACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSTEEN*SGHMGH
Trigger: GTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCCACTGAGGAGAACTaGTCAGGGCACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSTEEN*SGHMGH
Trigger: GTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRIFF*PRSGFK
Trigger: CTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAACCTTGGTCCAGCCCTaGCCGTCATCCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIATLVQP*PSSRIF
Trigger: GAAGATGCGGGATGACGGGCAGGGCTGGACCAAGGT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGRQRC*QTASQG
Trigger: ACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKTRMCS*RLLMSA
Trigger: CGCCGACATCAATAGCCTGCAGGAGCACATCCGCGT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWETRM*SCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGCACTGCCCACACTaGAGTGGGCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWHCPH*SGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAAGGACTGCGTGGGCTaGACCACCGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKKDCVG*TTGDSS
Trigger: ACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATAGATGGGGGAGTTGGTaGAGTAGGGGCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNRWGSW*SRGRNR
Trigger: TCTATTCCTGCCCCTACTGCACCAACTCCCCCATCT...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACGGCCTTGGACTTCTTaGTGTGGGCCAGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRPWTS*CGPVEC
Trigger: ACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGACGAGACTGGGCTCTaGTCGGCCTTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLDETGL*SALDFL
Trigger: CAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGCAGCAGCTCCAGGTaGAGCTTCAGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISSSSR*SFRWVW
Trigger: CCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATTTCTTCTCATTGCTGTaGTTCACCGCCAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNFFSLL*FTARCT
Trigger: GGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAA...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCCAGTTGCAGGCCGTaGAGCGGTACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPSCRP*SGTSSS
Trigger: AGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGCGGAAGTCCCAGTTaGAGGCCGTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIACGSPS*RPCSGT
Trigger: TGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGTTTGACGTGCACCTaGAGGTCAGCCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCLTCT*RSASLR
Trigger: CCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAACA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVPHWP*RSRSQH
Trigger: ATGCTGCGACCGAGAACGGCACGGCCAATGGGGTAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATTAAGCAGCATGCCCTaGAGGTCAGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLSSMP*RSAGSA
Trigger: AGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCTGCAGGGGCATCTTaGAGATGCGACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASAGAS*RCDRCP
Trigger: CGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALPASF*MWKVPW
Trigger: CCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSRWST*MWLSRS
Trigger: AGACCTGGAGAGCCACATGCAGGTGGACCACCGTGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATTGTCCTCCTGCCCGTaGACGGCAAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLSSCP*TAKMCC
Trigger: GCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGTCCTCCTGCCCGTaGACGGCAAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLSSCP*TAKMCC
Trigger: GCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSDPSL*VLAHRV
Trigger: CACACGATGAGCCAGCACGCACAGTGAGGGATCGCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGATGATGGGTATAATTaGTCCAAATTCCACACCCGT +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTDDGYN*SKFHTR
Trigger: ACGGGTGTGGAATTTGGAGCAATTATACCCATCATC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCAGGTCTCAAGCCCCTaGCTCAGCAAGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALQVSSP*LSKAFL
Trigger: AAGGAAGGCCTTGCTGAGGCAGGGGCTTGAGACCTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGACTTGTCGCAGAACTaGCAAGGGTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKDLSQN*QGYGRP
Trigger: GGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGGTGGATCTTGAGGTaGTCGCTGCGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKRWILR*SLREKA
Trigger: AGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACTGTGGGTCTTCAGGTaGATCTTGAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLWVFR*ILRWSL
Trigger: CAGCGACCACCTCAAGATCCACCTGAAGACCCACAG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLAWAW*IWASSV
Trigger: CACACTGCTCGCCCATATCCACCAAGCCCACGCCAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLWLAWA*WIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGHLCF*LAWAWW
Trigger: CCACCAAGCCCACGCCAACCAGAAACACAAGTGCCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGHLCF*LAWAWW
Trigger: CCACCAAGCCCACGCCAACCAGAAACACAAGTGCCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGGGCTTGTCCGCGTaGATGGTCTTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWGLSA*MVFRWI
Trigger: GATCCACCTGAAGACCATCCACGCGGACAAGCCCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCATGTGTGGCTCTGCTaGGGCTTGTCCGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHVWLC*GLSAWM
Trigger: CATCCACGCGGACAAGCCCCAGCAGAGCCACACATG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACATGTGTGGCTCTGCTaGGGCTTGTCCGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAHVWLC*GLSAWM
Trigger: CATCCACGCGGACAAGCCCCAGCAGAGCCACACATG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGTAGAGGGTGGGCATaGAGTCCAGGCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCRGWA*SPGRSD
Trigger: GTCAGATCTGCCTGGACTCCATGCCCACCCTCTACA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPETLV*HCPHCS
Trigger: ACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAAGGATACTCCCCATTaGAGATGGAGTTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTKDTPH*RWSWRL
Trigger: CAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCAGGTGCACCTGGATaGACACCTTGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPGAPG*TPWSRR
Trigger: TCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKQAQLS*WPLGVP
Trigger: GGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGATGTGGAAGGTGCCATaGATCTTGAGCTCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTMWKVP*ILSSSV
Trigger: CACGCTTGAGCTCAAGATCCATGGCACCTTCCACAT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGTCCACCTGCATGTaGCTCTCCAGGTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWSTCM*LSRSSA
Trigger: TGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGCTGGCTCATCGTGTaGTTCTGCAGCTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCWLIV*FCSSVW
Trigger: CCAGACCGAGCTGCAGAACCACACGATGAGCCAGCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCTCACTGTGCGTGCTaGCTCATCGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPHCAC*LIVWFC
Trigger: GCAGAACCACACGATGAGCCAGCACGCACAGTGAGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTCGGATGCTAATCGCATaGATTCCCTTTATTGAACTG +
Preference number: 4 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTRMLIA*IPFIEL
Trigger: CAGTTCAATAAAGGGAATCCATGCGATTAGCATCCG...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTGCCACCTGGAGTCCTaGCAAGGGAAGGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRCHLES*QGKGYP
Trigger: TGGGTAGCCCTTCCCTTGCCAGGACTCCAGGTGGCA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGACAAGTCTATCCTGAATaGTATGATCTTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGQVYPE*YDLGQD
Trigger: ATCTTGTCCAAGATCATACCATTCAGGATAGACTTG...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCAGACACCCCAGGCTaGAAGGTGAGGCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSDTPG*KVRHPS
Trigger: ACTTGGGTGCCTCACCTTCCAGCCTGGGGTGTCTGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTTTCCAAAACTACCTaGACTCCAATTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCFSKTT*TPIPSS
Trigger: AGAACTTGGAATTGGAGTCCAGGTAGTTTTGGAAAA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGATCATCTGCGTGGGTaGCGCAACATCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALDHLRG*RNILAG
Trigger: TCCAGCAAGGATGTTGCGTCACCCACGCAGATGATC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCTQCT*RACWSC
Trigger: ACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKKTSGQ*MHCRSA
Trigger: GGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTT...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALVDTFH*GELLRA
Trigger: TGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTAC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAICERAR*GCRGWA
Trigger: TGCCCACCCTCTACAACCTCAACGAGCACGTTCGCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRNRPP*RTAWAA
Trigger: TGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRNRPP*RTAWAA
Trigger: TGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAACTTGAGGTCGCATTaGTTGCAAGGATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTNLRSH*LQGYSP
Trigger: TGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGAGTCGAAGACCTCCTaGCACAGGGTGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAESKTS*HRVQWY
Trigger: GTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISPCVR*ASAAKG
Trigger: TCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCTCAAGCGTGGAAGTaGCTGTCTGCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLAQAWK*LSACRP
Trigger: TGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCTTACACTCGTGGTTaGTGCCTTCCTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTAYTRG*CLPQSC
Trigger: ACATGATTGAGGAAGGCATCAACCACGAGTGTAAGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGGTCTCCAGGAGGCTaGAAATTGGCATTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRSPGG*KLAFTA
Trigger: GGCTGTGAATGCCAATTTTCAGCCTCCTGGAGACCT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGCCGGCTTCGCTGCTaGTTCCCACATGGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRLRC*FPHGVK
Trigger: TTTCACGCCATGTGGGAATCAGCAGCGAAGCCGGCT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACCATCACGGCACTCATaGCCAGGTGTGGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLPSRHS*PGVAMH
Trigger: ATGCATAGCCACACCTGGTCATGAGTGCCGTGATGG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTGACGCAACATCCTTaGTGGAGGGAGACGAGGCCA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVTQHP*WRETRP
Trigger: TGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTGACGCAACATCCTTaGTGGAGGGAGACGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVTQHP*WRETRP
Trigger: TGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCATCTCCGATCATCTaGGTGGGTGACGCAACATCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPSPII*VGDATS
Trigger: GGATGTTGCGTCACCCACGCAGATGATCGGAGATGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGTATGCAGCTTGATGTaGCGGTCACGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLVCSLM*RSRLLL
Trigger: CAAGAGGAGCCGTGACCGGCACATCAAGCTGCATAC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGTATGCAGCTTGATGTaGCGGTCACGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALVCSLM*RSRLLL
Trigger: CAAGAGGAGCCGTGACCGGCACATCAAGCTGCATAC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWETRM*SCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACGGCCTTGGACTTCTTaGTGTGGGCCAGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRPWTS*CGPVEC
Trigger: ACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCGGCCTTGGACTTCTTaGTGTGGGCCAGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRPWTS*CGPVEC
Trigger: ACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGACGAGACTGGGCTCTaGTCGGCCTTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIADETGL*SALDFL
Trigger: CAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGTCAAAGTCCTCTTTaGACTGGGGGCACGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSQSPL*TGGTLA
Trigger: AGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCCACCGAGGAAAATTaGTTGTCGCAGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSTEEN*LSQLSH
Trigger: GTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCTCCTGACACAGGGTaGAGTGGTACAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPPDTG*SGTTQR
Trigger: CCTTTGTGTTGTACCACTGCACCCTGTGTCAGGAGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATTCTTCTCATTGCTGTaGTTCACCGCCAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVFFSLL*FTARCT
Trigger: GGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCCAGTTGCAGGCCGTaGAGCGGTACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPSCRP*SGTSSS
Trigger: AGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGCGTGGAAGGCCTTaGTGCAGAACTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWRGRP*CRTYSY
Trigger: ATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGCTTCTCCCGCAGGTaGTTCTCCAGCAGGATGATG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKCFSRR*FSSRMM
Trigger: CATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVASNTQ*FSRRCF
Trigger: GAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACCGTGTCCAGGCTCTTaGTGTGGGTCACCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLPCPGS*CGSPCV
Trigger: AACACAAGGTGACCCACAGCAAGAGCCTGGACACGG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALVEVTV*MQTTQR
Trigger: CCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCAC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRWST*MWLSRS
Trigger: AGACCTGGAGAGCCACATGCAGGTGGACCACCGTGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCACGGCAAAGATGTaGTGCTGCAACTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCTAKM*CCNLLA
Trigger: GGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTGTCCTCCTGCCCGTaGACGGCAAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALSSCP*TAKMCC
Trigger: GCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTGTCCTCCTGCCCGTaGACGGCAAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILSSCP*TAKMCC
Trigger: GCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASDPSL*VLAHRV
Trigger: CACACGATGAGCCAGCACGCACAGTGAGGGATCGCT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTCCCCAAGGGCGTGTaGAAGCCCACAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVPKGV*KPTGTC
Trigger: ACAAGTTCCTGTGGGCTTGCACACGCCCTTGGGGAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGCCCTCCTGCAGGATaGCTGGCACCATCATTGATG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCPPAG*LAPSLM
Trigger: CATCAATGATGGTGCCAGGCATCCTGCAGGAGGGCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCCAGGGACCACATCTaGTGGTCATCTCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKARDHI*WSSPYP
Trigger: GGGATAAGGAGATGACCAGCAGATGTGGTCCCTGGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGCAGCTTGTCGCTGTaGATCTGCTCGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGSLSL*ICSCLF
Trigger: GAAGAGGCACGAGCAGATCCACAGCGACAAGCTGCC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTGTGGGTCTTCAGGTaGATCTTGAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLWVFR*ILRWSL
Trigger: CAGCGACCACCTCAAGATCCACCTGAAGACCCACAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCTGTGGGTCTTCAGGTaGATCTTGAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLWVFR*ILRWSL
Trigger: CAGCGACCACCTCAAGATCCACCTGAAGACCCACAG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGCTTGCTGGAGCTGTaGGTCTTCAGGTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGLLEL*VFRWIL
Trigger: CAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATCCAGCTCCTCCGTCTaGCTGAAGGTGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKSSSSV*LKVSSQ
Trigger: CTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWAWWI*ASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLWAWWI*ASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALAWAW*IWASSV
Trigger: CACACTGCTCGCCCATATCCACCAAGCCCACGCCAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWLAWA*WIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCFWLA*AWWIWA
Trigger: CGCCCATATCCACCAAGCCCACGCCAACCAGAAACA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLCFWLA*AWWIWA
Trigger: CGCCCATATCCACCAAGCCCACGCCAACCAGAAACA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGGGCTTGTCCGCGTaGATGGTCTTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWGLSA*MVFRWI
Trigger: GATCCACCTGAAGACCATCCACGCGGACAAGCCCCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPETLV*HCPHCS
Trigger: ACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPETLV*HCPHCS
Trigger: ACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGATGGAGCCAAAGATaGGGGAGTTGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGWSQR*GSWCSR
Trigger: CCTACTGCACCAACTCCCCCATCTTTGGCTCCATCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGATGGAGCCAAAGATaGGGGAGTTGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGWSQR*GSWCSR
Trigger: CCTACTGCACCAACTCCCCCATCTTTGGCTCCATCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHWRWS*RLLRAA
Trigger: AGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVTPHWR*SWRLLR
Trigger: TCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGGTGCAGCTTCAGGTaGGTCTGGAAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRCSFR*VWKLSK
Trigger: CTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACCT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCTGGATGGACACCTTaGAGTCGAAGACCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPGWTP*SRRPPD
Trigger: GTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACCAGGTGCACCTGGATaGACACCTTGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLPGAPG*TPWSRR
Trigger: TCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGCAGGATGATGGCGTaGAAGGCCTTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSRMMA*KALLQN
Trigger: GTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIQAQLS*WPLGVP
Trigger: GGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSRLLL*VTLCSV
Trigger: CACCGAACACAAGGTGACCCACAGCAAGAGCCTGGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSRLLL*VTLCSV
Trigger: CACCGAACACAAGGTGACCCACAGCAAGAGCCTGGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTTTTTCCGGGGCACTaGCGATGTCTGGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLFPGH*RCLGAF
Trigger: AAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACTTTTTCCGGGGCACTaGCGATGTCTGGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLFPGH*RCLGAF
Trigger: AAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCTTTTTCCGGGGCACTaGCGATGTCTGGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLFPGH*RCLGAF
Trigger: AAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCACAGCTTACACTCGTaGTTGATGCCTTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTHSLHS*LMPSSI
Trigger: GATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGGGGAGTCGAACATCTaGTTGCACAGCTTACACTCG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVGESNI*LHSLHS
Trigger: CGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGCAACTTGTTGGCCTaGACGAAGACTGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTCNLLA*TKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGCTGGCTCATCGTGTaGTTCTGCAGCTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIACWLIV*FCSSVW
Trigger: CCAGACCGAGCTGCAGAACCACACGATGAGCCAGCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACACCCAGGAGAGTTGTaGGTCGTCATCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHPGEL*VVITIS
Trigger: GGAGATGGTGATGACGACCCACAACTCTCCTGGGTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCAGACACCCCAGGCTaGAAGGTGAGGCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISDTPG*KVRHPS
Trigger: ACTTGGGTGCCTCACCTTCCAGCCTGGGGTGTCTGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSSSSG*RTCRRT
Trigger: AGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVDTFH*GELLRA
Trigger: TGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGCTCAAGCGTGGAAGTaGCTGTCTGCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIAQAWK*LSACRP
Trigger: TGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGCTTACACTCGTGGTTaGTGCCTTCCTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNAYTRG*CLPQSC
Trigger: ACATGATTGAGGAAGGCATCAACCACGAGTGTAAGC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCTTCTGAGGGCACTGTaGGCAGTCGTAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLLRAL*AVVDLV
Trigger: GACAAGATCTACGACTGCTCACAGTGCCCTCAGAAG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGGAAGAAGAACTTCTaGGGGCACTGTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLWKKNF*GHCEQS
Trigger: CGACTGCTCACAGTGCCCTCAGAAGTTCTTCTTCCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGGAAGAAGAACTTCTaGGGGCACTGTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKWKKNF*GHCEQS
Trigger: CGACTGCTCACAGTGCCCTCAGAAGTTCTTCTTCCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGGTCTCCAGGAGGCTaGAAATTGGCATTCACAGCC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRSPGG*KLAFTA
Trigger: GGCTGTGAATGCCAATTTTCAGCCTCCTGGAGACCT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTATGCAGCTTGATGTaGCGGTCACGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVCSLM*RSRLLL
Trigger: CAAGAGGAGCCGTGACCGGCACATCAAGCTGCATAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGTATGCAGCTTGATGTaGCGGTCACGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRVCSLM*RSRLLL
Trigger: CAAGAGGAGCCGTGACCGGCACATCAAGCTGCATAC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTCTTGTCGCCCGTATaGAGCTTGATGTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLFLSPV*SLMCRS
Trigger: TGACCGGCACATCAAGCTGCATACGGGCGACAAGAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATTCTTTTTGTGGGCCTaGATGTGGCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKFFLWA*MWLCSE
Trigger: CTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTCTTTTTGTGGGCCTaGATGTGGCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALFFLWA*MWLCSE
Trigger: CTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAACTCTAGTTTGGCACTaGCCACACTGCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIATLVWH*PHCSGP
Trigger: AGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGATGGGGGAGTTGGTaGAGTAGGGGCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKRWGSW*SRGRNR
Trigger: TCTATTCCTGCCCCTACTGCACCAACTCCCCCATCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGTTCTCCTTGATGTaGTTGGTGAGTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWFSLM*LVSFRM
Trigger: CATCCTGAAACTCACCAAGCACATCAAGGAGAACCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCCACCGAGGAAAATTaGTTGTCGCAGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSTEEN*LSQLSH
Trigger: GTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCTCCTGACACAGGGTaGAGTGGTACAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPPDTG*SGTTQR
Trigger: CCTTTGTGTTGTACCACTGCACCCTGTGTCAGGAGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTCTTCTCATTGCTGTaGTTCACCGCCAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLFFSLL*FTARCT
Trigger: GGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCCAGTTGCAGGCCGTaGAGCGGTACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPSCRP*SGTSSS
Trigger: AGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCGTGGAAGGCCTTGCTaGAGAACTTACAGTTATACT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTRGRPC*RTYSYT
Trigger: AGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLASNTQ*FSRRCF
Trigger: GAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTAAGCAGCATGCCCTaGAGGTCAGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILSSMP*RSAGSA
Trigger: AGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCGTGTCCAGGCTCTTaGTGTGGGTCACCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPCPGS*CGSPCV
Trigger: AACACAAGGTGACCCACAGCAAGAGCCTGGACACGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGGTGCATCTGGCAGTaGTCAATAAACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGCIWQ*SINSSS
Trigger: CGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGTGCATCTGGCAGTaGTCAATAAACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGCIWQ*SINSSS
Trigger: CGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVEVTV*MQTTQR
Trigger: CCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVEVTV*MQTTQR
Trigger: CCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGCTTCACCAGGTCCTaGTTGCTGCGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASFTRS*LLRNSL
Trigger: CAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGCTTCACCAGGTCCTaGTTGCTGCGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISFTRS*LLRNSL
Trigger: CAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLAKMCC*NLLAWT
Trigger: CGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACGGCAAAGATGTGCTaGTGCAACTTGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTAKMC*CNLLAW
Trigger: CCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCACGGCAAAGATGTGCTaGTGCAACTTGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALTAKMC*CNLLAW
Trigger: CCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATCCCTCACTGTGCGTaGTGGCTCATCGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAIPHCA*WLIVWF
Trigger: GAACCACACGATGAGCCAGCACGCACAGTGAGGGAT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGGCTACCCACTTGCCTaGCTGTATCCAACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRGYPLA*LYPTKG
Trigger: CCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAGCCTCAGAACCCAAGTaGCACCTGGAGTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKASEPK*HLESWQ
Trigger: TTGCCAGGACTCCAGGTGGCACTTGGGTTCTGAGGC...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATACATTATAATTAGGTaGAATCTGTCTGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRYIIIR*NLSACF
Trigger: GAAACAGGCAGACAGATTGCACCTAATTATAATGTA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAAAGGAGGGTCCCCGCTaGAACAGTGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKKEGPR*NSGPLQ
Trigger: CTGAAGAGGACCACTGTTGCAGCGGGGACCCTCCTT...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILRSSA*VTQHPC
Trigger: GCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACTGTGGGTCTTCAGGTaGATCTTGAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALWVFR*ILRWSL
Trigger: CAGCGACCACCTCAAGATCCACCTGAAGACCCACAG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGTAGAGGGTGGGCATaGAGTCCAGGCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIACRGWA*SPGRSD
Trigger: GTCAGATCTGCCTGGACTCCATGCCCACCCTCTACA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACAAAGATGGGGGAGTTaGTGCAGTAGGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKQRWGS*CSRGRN
Trigger: ATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHWRWS*RLLRAA
Trigger: AGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKTPHWR*SWRLLR
Trigger: TCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTPHWR*SWRLLR
Trigger: TCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGGTGCAGCTTCAGGTaGGTCTGGAAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRCSFR*VWKLSK
Trigger: CTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGCAGGATGATGGCGTaGAAGGCCTTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISRMMA*KALLQN
Trigger: GTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIFLGGH*GYPIGR
Trigger: ACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISRLLL*VTLCSV
Trigger: CACCGAACACAAGGTGACCCACAGCAAGAGCCTGGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRLLL*VTLCSV
Trigger: CACCGAACACAAGGTGACCCACAGCAAGAGCCTGGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGCACTTGATGCACTaGTATGTCTTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWHLMH*YVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTCTCGAAGGTCATCTaGCACTTGATGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTFSKVI*HLMHWY
Trigger: ATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGGGAGTCGAACATCTaGTTGCACAGCTTACACTCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGESNI*LHSLHS
Trigger: CGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAGGTGACAGAGGAGCTTaGCCGGGGAGTCGAACATCT +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKGDRGA*PGSRTS
Trigger: AGATGTTCGACTCCCCGGCCAAGCTCCTCTGTCACC...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCCATGGTAACAGAGTaGCCACCTCTCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSMVTE*PPLSSS
Trigger: ACTGGAGCTGAGAGGTGGCCACTCTGTTACCATGGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562871.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACTTCCAGCGCACGGCTaGTTTTCTGATCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALPAHG*FSDRTL
Trigger: CAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCACCCAGGAGAGTTGTaGGTCGTCATCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHPGEL*VVITIS
Trigger: GGAGATGGTGATGACGACCCACAACTCTCCTGGGTG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGGGCTCCATGGGGTTTaGGATAAATCCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALGLHGV*DKSRAG
Trigger: TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCTTCCCACTGCTCTTaGACTGCCCACCTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSSHCS*TAHLPY
Trigger: ATAAGGGAGGTGGGCAGTCCAAGAGCAGTGGGAAGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCACCCAGGAGAGTTGTaGGTCGTCATCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALHPGEL*VVITIS
Trigger: AGAGATGGTGATGACGACCCACAACTCTCCTGGGTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSSSSG*RTCRRT
Trigger: AGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACGAGAAGAAAGTCCGTaGACAAACGTTGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVREESP*TNVALV
Trigger: CACAAGTGCAACGTTTGTTCACGGACTTTCTTCTCG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGCAGGGTCTGCTCTATaGTTCACATATGTAAGATGC +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNAGSAL*FTYVRC
Trigger: GCATCTTACATATGTGAATCATAGAGCAGACCCTGC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAAGGCCCCTCACAGTTaGAAGGCAAGTGTCTCATCC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAKAPHS*KASVSS
Trigger: GGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTCTTGTCGCCCGTATaGAGCTTGATGTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIFLSPV*SLMCRS
Trigger: TGACCGGCACATCAAGCTGCATACGGGCGACAAGAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTTCTTTTTGTGGGCCTaGATGTGGCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRFFLWA*MWLCSE
Trigger: CTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCCATGGAGCACTGGTTaGAGAAGAAAGCATTATTAC +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTPWSTG*RRKHYY
Trigger: GTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGATGGGGGAGTTGGTaGAGTAGGGGCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIRWGSW*SRGRNR
Trigger: TCTATTCCTGCCCCTACTGCACCAACTCCCCCATCT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGTCAAAGTCCTCTTTaGACTGGGGGCACGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASQSPL*TGGTLA
Trigger: AGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCCACCGAGGAAAATTaGTTGTCGCAGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISTEEN*LSQLSH
Trigger: GTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCTCCTGACACAGGGTaGAGTGGTACAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPPDTG*SGTTQR
Trigger: CCTTTGTGTTGTACCACTGCACCCTGTGTCAGGAGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCGTGGAAGGCCTTGCTaGAGAACTTACAGTTATACT +
Preference number: 4 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNRGRPC*RTYSYT
Trigger: AGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILRRSG*IWQCSI
Trigger: TATTGAGCACTGCCAGATGCACCCTGACCTGCGCAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGTCGAACATCTGGTTaGACAGCTTACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSRTSG*TAYTRG
Trigger: ACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAAKMCC*NLLAWT
Trigger: CGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIAKMCC*NLLAWT
Trigger: CGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGCACGGCAAAGATGTaGTGCTGCAACTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAICTAKM*CCNLLA
Trigger: GGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCTGATGGTAAAGAATaGCAGTCCCAGGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPDGKE*QSQEGP
Trigger: AGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCACTGCTCTTGGACTaGCCACCTCCCTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPLLLD*PPPLFL
Trigger: AAGAAATAAGGGAGGTGGGCAGTCCAAGAGCAGTGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCAGCTCACGGCTTCTaGATTTGCAGTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPAHGF*ICSVLF
Trigger: GAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTTCCTTCTCCGACTTaGCCAGATGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLPSPT*PDAPCS
Trigger: AGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCG +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKCFWLA*AWWIWA
Trigger: CGCCCATATCCACCAAGCCCACGCCAACCAGAAACA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAGCTTGTCCGCGTGGATaGTCTTCAGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKACPRG*SSGGSP
Trigger: TGGAGATCCACCTGAAGACCATCCACGCGGACAAGC...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTKPMEH*LQKKAL
Trigger: TAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTTGCTGTGGGCCAGTaGAATGTTCTTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLAVGQ*NVLVVL
Trigger: GAGAACCACAAGAACATTCCACTGGCCCACAGCAAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAAGGATACTCCCCATTaGAGATGGAGTTGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALKDTPH*RWSWRL
Trigger: CAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACATAGTGGGTCGACGTaGTCATGTAATGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVHSGST*SCNALS
Trigger: TGACAGTGCATTACATGACCACGTCGACCCACTATG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCATGTGGAAGGTGCCATaGATCTTGAGCTCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALMWKVP*ILSSSV
Trigger: CACGCTTGAGCTCAAGATCCATGGCACCTTCCACAT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAATGTGGAAGGTGCCATaGATCTTGAGCTCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLMWKVP*ILSSSV
Trigger: CACGCTTGAGCTCAAGATCCATGGCACCTTCCACAT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGCACTTGATGCACTaGTATGTCTTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWHLMH*YVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGGCACTTGATGCACTaGTATGTCTTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLWHLMH*YVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGGCACTTGATGCACTaGTATGTCTTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKWHLMH*YVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVMWLAT*IWISLS
Trigger: CGAGAGAGAGATCCAAATCCACGTTGCCAACCACAT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGATGTAATGTTCAAATaGCCCTCCCCACGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIDVMFK*PSPRRL
Trigger: GAGACGCCGTGGGGAGGGCCATTTGAACATTACATC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGACTGATCTCTATGACTaGGAACCTGCGGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRTDLYD*EPAAPT
Trigger: GGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAGT...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASSSSG*RTCRRT
Trigger: AGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVQSWRT*GRIDCK
Trigger: CTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCGAGAAGAAAGTCCGTaGACAAACGTTGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALREESP*TNVALV
Trigger: CACAAGTGCAACGTTTGTTCACGGACTTTCTTCTCG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRSSGT*CTGMSF
Trigger: AAAAGACATACCAGTGCATCAAGTGCCAGATGACCT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCATTTCTCTCCTCTTaGCTTGTCACGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSFLSS*LVTLFL
Trigger: CAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAAAGCCAAATCCAAATaGGAGGCTGATTCCATCGCG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALKAKSK*EADSIA
Trigger: CGCGATGGAATCAGCCTCTCATTTGGATTTGGCTTT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSDLAR*SLFFLW
Trigger: CCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSDLAR*SLFFLW
Trigger: CCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGRQRC*QTASQG
Trigger: ACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGTTCTCCTTGATGTaGTTGGTGAGTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWFSLM*LVSFRM
Trigger: CATCCTGAAACTCACCAAGCACATCAAGGAGAACCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACGTGGAAGGCCTTGCTaGAGAACTTACAGTTATACT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVRGRPC*RTYSYT
Trigger: AGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGCGCCACCAGTCTCAATaGTCTCACATCCTACTGATC +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRRHQSQ*SHILLI
Trigger: GATCAGTAGGATGTGAGAGCATTGAGACTGGTGGCG...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACACCCAGGAGAGTTGTaGGTCGTCATCACCATCTTT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAHPGEL*VVITIF
Trigger: AAAGATGGTGATGACGACCCACAACTCTCCTGGGTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALTCVSG*RGLGGY
Trigger: ATATCCACCAAGCCCACGCCAACCAGAAACACAAGT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATAGTGGGTCGACGTaGTCATGTAATGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHSGST*SCNALS
Trigger: TGACAGTGCATTACATGACCACGTCGACCCACTATG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKMWLAT*IWISLS
Trigger: CGAGAGAGAGATCCAAATCCACGTTGCCAACCACAT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLMWLAT*IWISLS
Trigger: CGAGAGAGAGATCCAAATCCACGTTGCCAACCACAT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACCTCAATCATGTGGTTaGCAACGTGGATTTGGATCT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVPQSCG*QRGFGS
Trigger: AGATCCAAATCCACGTTGCCAACCACATGATTGAGG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCTTCCTCAATCATGTaGTTGGCAACGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPSSIM*LATWIW
Trigger: CCAAATCCACGTTGCCAACCACATGATTGAGGAAGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACACAGCTTACACTCGTaGTTGATGCCTTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHSLHS*LMPSSI
Trigger: GATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACACAGCTTACACTCGTaGTTGATGCCTTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHSLHS*LMPSSI
Trigger: GATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATGCAACTTGTTGGCCTaGACGAAGACTGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLCNLLA*TKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCCAGACCTTTCCTCTaGAAGGGGTTAGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSRPFL*KGLVSS
Trigger: AGAACTCACTAACCCCTTCCAGAGGAAAGGTCTGGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKQSWRT*GRIDCK
Trigger: CTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACAAACGTTGCACTTGTaGCTGCCCTTGATAAACTCA +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKQTLHL*LPLINS
Trigger: TGAGTTTATCAAGGGCAGTCACAAGTGCAACGTTTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRSSGT*CTGMSF
Trigger: AAAAGACATACCAGTGCATCAAGTGCCAGATGACCT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLRSSGT*CTGMSF
Trigger: AAAAGACATACCAGTGCATCAAGTGCCAGATGACCT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCATTTCTCTCCTCTTaGCTTGTCACGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISFLSS*LVTLFL
Trigger: CAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCACCAGAAGCCCCTTaGTATGGGAGTCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISPEAP*YGSLLE
Trigger: TTCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACTAAGCATTTCTCTCTaGCCTTTGAAAAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLSISL*PLKRPL
Trigger: CAGTGGCCTTTTCAAAGGTCAGAGAGAAATGCTTAG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASDLAR*SLFFLW
Trigger: CCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISDLAR*SLFFLW
Trigger: CCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCGTGGAAGGCCTTGCTaGAGAACTTACAGTTATACT +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRGRPC*RTYSYT
Trigger: AGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGGCGTGGAAGGCCTTaGTGCAGAACTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIWRGRP*CRTYSY
Trigger: ATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAGTCGAACATCTGGTTaGACAGCTTACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAISRTSG*TAYTRG
Trigger: ACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGTCGAACATCTGGTTaGACAGCTTACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRTSG*TAYTRG
Trigger: ACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVKPMEH*LQKKAL
Trigger: TAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAGTGGAATGTTCTTGTaGTTCTCCTTGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSGMFL*FSLMCL
Trigger: CAAGCACATCAAGGAGAACCACAAGAACATTCCACT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCATAGTGGGTCGACGTaGTCATGTAATGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHSGST*SCNALS
Trigger: TGACAGTGCATTACATGACCACGTCGACCCACTATG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTCTCGAAGGTCATCTaGCACTTGATGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLFSKVI*HLMHWY
Trigger: ATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACACAGCTTACACTCGTaGTTGATGCCTTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAHSLHS*LMPSSI
Trigger: GATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTGCAACTTGTTGGCCTaGACGAAGACTGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRCNLLA*TKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACACTGTCCGGTGAACTaGCAAATCCAATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHCPVN*QIQSKH
Trigger: ATGCTTTGATTGGATTTGCCAGTTCACCGGACAGTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACAGGAGGCTGAAAATTaGCATTCACAGCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLQEAEN*HSQPSV
Trigger: AACTGAAGGCTGTGAATGCCAATTTTCAGCCTCCTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCTGCTGATTCCCACATaGCGTGAAAAGCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLLIPT*REKLLN
Trigger: GTTTAAGAGCTTTTCACGCCATGTGGGAATCAGCAG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp TCATTAGAGTTTTACATCTGGGTTGCAAATGACACTTaGATTGGATGTAATGTTCAAATGGCCCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SLEFYIWVANDT*IGCNVQMALPT
Trigger: CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTAAAACTCTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR TCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAAACTTGAGGTCGCATTaGTTGCAAGGATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKNLRSH*LQGYSP
Trigger: TGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTT...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAQSWRT*GRIDCK
Trigger: CTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACAAACGTTGCACTTGTaGCTGCCCTTGATAAACTCA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAQTLHL*LPLINS
Trigger: TGAGTTTATCAAGGGCAGTCACAAGTGCAACGTTTG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACGAGAAGAAAGTCCGTaGACAAACGTTGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKREESP*TNVALV
Trigger: CACAAGTGCAACGTTTGTTCACGGACTTTCTTCTCG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAATGGCGTGGAAGGCCTTaGTGCAGAACTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKWRGRP*CRTYSY
Trigger: ATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCA...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR GCA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAACTGTACTAGTTACTaGAGTCAGATTAAGTCACAT +
Preference number: 4 (lower is better)
Translates to: WVANDTLIGCNVQMALPTNCTSY*SQIKSH
Trigger: ATGTGACTTAATCTGACTGCAGTAACTAGTACAGTT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGATGATGGGTATAATTaGTCCAAATTCCACACCCGT +
Preference number: 4 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKDDGYN*SKFHTR
Trigger: ACGGGTGTGGAATTTGGAGCAATTATACCCATCATC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALKPMEH*LQKKAL
Trigger: TAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCCTCAATCATGTGGTTaGCAACGTGGATTTGGATCT +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIPQSCG*QRGFGS
Trigger: AGATCCAAATCCACGTTGCCAACCACATGATTGAGG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTAATCACTGTCCGGTaGACTGGCAAATCCAATCAA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIALITVR*TGKSNQ
Trigger: TTGATTGGATTTGCCAGTTCACCGGACAGTGATTAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAAGCAGGGTCTGCTCTATaGTTCACATATGTAAGATGC +
Preference number: 4 (lower is better)
Translates to: LDKILNFSGIVLSHLELKAGSAL*FTYVRC
Trigger: GCATCTTACATATGTGAATCATAGAGCAGACCCTGC...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCATGGAGCACTGGTTaGAGAAGAAAGCATTATTAC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPWSTG*RRKHYY
Trigger: GTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCCATGGAGCACTGGTTaGAGAAGAAAGCATTATTAC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIPWSTG*RRKHYY
Trigger: GTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCTAGAAATGTAGTCTaGGGCGGAAAGTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASRNVV*GGKSKS
Trigger: GCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAGCAGACCATCCAGTTaGACTGAAACCGATTATATT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLSRPSS*TETDYI
Trigger: AATATAATCGGTTTCAGTGCAACTGGATGGTCTGCT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR GCA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTTATAACCCTACACTaGTCCCCAACCCTAATACCA +
Preference number: 4 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAFITLH*SPTLIP
Trigger: TGGTATTAGGGTTGGGGAGCAGTGTAGGGTTATAAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATCAACCCTCTTCTTATaGATCCATGTCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVSTLFL*IHVFLL
Trigger: AAGAAGAAAGACATGGATGCATAAGAAGAGGGTTGA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS-3UTR CCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGATTCTGAACTTCTCTaGGATTGTTTTAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLDSELL*DCFKPP
Trigger: AGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACCATCCAGTTGCACTaGAACCGATTATATTCATTA +
Preference number: 4 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTIQLH*NRLYSL
Trigger: TAATGAATATAATCGGTTTCAGTGCAACTGGATGGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCACCATCCAGTTGCACTaGAACCGATTATATTCATTA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALTIQLH*NRLYSL
Trigger: TAATGAATATAATCGGTTTCAGTGCAACTGGATGGT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCATGGATTCCCTTTATTaGACTGTACTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: YIWVANDTLIGCNVQMALMDSLY*TVLVTA
Trigger: TGCAGTAACTAGTACAGTTCAATAAAGGGAATCCAT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTCTTGGACAAGATTCTaGACTTCTCTGGGATTGTTT +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRSWTRF*TSLGLF
Trigger: AAACAATCCCAGAGAAGTTCAGAATCTTGTCCAAGA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR TCA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGATGGATTCCCTTTATTaGACTGTACTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRMDSLY*TVLVTA
Trigger: TGCAGTAACTAGTACAGTTCAATAAAGGGAATCCAT...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
3UTR CAA 72 bp AGTTATAGTCGCAAGTCTATCCTGAATGGTATGATCTaGGACAAGATTCTGAACTTCTCTGGGATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SYSRKSILNGMI*DKILNFSGIVL
Trigger: TAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAAGATCATACCATTCAGGATAGACTTGCGACTATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR GCA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTACATTATAATTAGGTaGAATCTGTCTGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIYIIIR*NLSACF
Trigger: GAAACAGGCAGACAGATTGCACCTAATTATAATGTA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS CCA 90 bp CCCCCTCTTCAACTTTCACCGAGCGCGGCTTCGCCTGCTTCCGCCTaGACATGTCCGGGGCTCCGGGCGCTCCGTCGCCCTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PPLQLSPSAASPASA*TCPGLRALRRPPQP
Trigger: CGGCTGCGGAGGGCGACGGAGCGCCCGGAGCCCCGGACATGTCCAGGCGGAAGCAGGCGAAGCCGCGCTCGGTGAAAGTTGAAGAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS GCA 90 bp TCTGAGGCCTCCCCCTCTTCAACTTTCACCGAGCGCGGCTTCGCCTaGTTCCGCCTGGACATGTCCGGGGCTCCGGGCGCTCCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SEASPSSTFTERGFA*FRLDMSGAPGAPSP
Trigger: GGGCGACGGAGCGCCCGGAGCCCCGGACATGTCCAGGCGGAAGCAGGCGAAGCCGCGCTCGGTGAAAGTTGAAGAGGGGGAGGCCTCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS CCA 90 bp GCATCTTCTTCTGCCCCCGCAGCGGCTTCAAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGGCGCTGGAGTCGGGTGTGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSSAPAAASRWSPG*SHAPQRRWSRVWRC
Trigger: GCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGCGGGGGCAGAAGAAGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp ATCTTTCCCCCTGCTCACCAGGGCGTCCCAGGGCAAACTGGCCGATaGCAAGAGGGCCAGAACCTGAGCCCGGGTTCCCAGCACCCGGCG +
Preference number: 5 (lower is better)
Translates to: IFPPAHQGVPGQTGR*QEGQNLSPGSQHPA
Trigger: CGCCGGGTGCTGGGAACCCGGGCTCAGGTTCTGGCCCTCTTGGCATCGGCCAGTTTGCCCTGGGACGCCCTGGTGAGCAGGGGGAAAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS CCA 90 bp GCTTCAAGGTGGAGTCCGGGGTGGAGCCACGCTCCACAGAGGCGCTaGAGTCGGGTGTGGCGCTGCTCATGGAGGCCACGCTGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: ASRWSPGWSHAPQRR*SRVWRCSWRPRCPV
Trigger: TACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCTTGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp TGGCGCTGCTCATGGAGGCCACGCTGCCCAGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGTCGGGCTGCCGGTGGCTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: WRCSWRPRCPVQGRD*HCGCWSRAAGGCPG
Trigger: ACCTGGACAGCCACCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGAGCAGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVLCRGI*QMRQVP
Trigger: GGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS CCA 90 bp CATCACCATCTTTCCCCCTGCTCACCAGGGCGTCCCAGGGCAAACTaGCCGATGCCAAGAGGGCCAGAACCTGAGCCCGGGTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: HHHLSPCSPGRPRAN*PMPRGPEPEPGFPA
Trigger: TGCTGGGAACCCGGGCTCAGGTTCTGGCCCTCTTGGCATCGGCCAGTTTGCCCTGGGACGCCCTGGTGAGCAGGGGGAAAGATGGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS CCA 90 bp CCTCCTCGCCGAGGCCGAGGTCACAACCATCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGCTGGAGGGAGACGAGGCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: PPRRGRGHNHLRSSA*VTQHPCWRETRPPR
Trigger: CCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TGGGTGCCTTTCCGGGGCCCACTGGTCTCCGGCGTGAGGTCACGGTaGTCCACCTGCATGTGGCTCTCCAGGTCTTCGGCACTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WVPFRGPLVSGVRSR*STCMWLSRSSALSN
Trigger: GTTTGAGAGTGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGCACTGGGGGCACGCTaGCTTCCGCAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEALGAR*LPQQQL
Trigger: GAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCCCAGGTGGCTGTGTTaGACGTGCACCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVPRWLC*TCTCRS
Trigger: TGACCTGCAGGTGCACGTCAAACACAGCCACCTGGG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS GCA 90 bp CCTTCCTCCTCGCCGAGGCCGAGGTCACAACCATCTCCGATCATCTaGGTGGGTGACGCAACATCCTTGCTGGAGGGAGACGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: PSSSPRPRSQPSPII*VGDATSLLEGDEAT
Trigger: GGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp CCCTGGCCATTGGGGGAGGACGCCGCTGAGCTGCCCGCCAGCTTCTaGATGTGGAAGGTGCCATGGATCTTGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: PWPLGEDAAELPASF*MWKVPWILSSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GTAGCTCAAGCGGATGAAGGACTTGTCGCAGAACTGGCAAGGGTATaGCAGGCCCGTGCCCCCTTCCTCCTCGCCGAGGCCGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: VAQADEGLVAELARV*QARAPFLLAEAEVT
Trigger: TGTGACCTCGGCCTCGGCGAGGAGGAAGGGGGCACGGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACCCACCCACCTGTCCGTaGGCGCTGCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHPPTCP*ALRAMQ
Trigger: CTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGG...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp ATATGGGCGAGCAGTGTGTTCTCGTCGACGAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCCTTCTCGGACAGCTGCGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: IWASSVFSSTKTSGQ*MHCRSAFSDSCGWR
Trigger: CCGCCACCCGCAGCTGTCCGAGAAGGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp CGTTGGGGCCGCAGTGGGAGACGCGGATGTGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGGGGCAGTAGTTGCAGTGGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RWGRSGRRGCAPAGY*CRRTSRGSSCSGRQ
Trigger: CTGCCTTCCACTGCAACTACTGCCCCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp CTTGTAGAGCTTCTGCAGCCCCTGGCCATTGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTGCATGTGGAAGGTGCCATGGATCTT +
Preference number: 5 (lower is better)
Translates to: LVELLQPLAIGGGRR*AARQLLHVEGAMDL
Trigger: AAGATCCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCTCTACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp GGATACTCCCCATTGGAGATGGAGTTGGCGCTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACCTCCACATCGGACGAGACTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GYSPLEMELALAESR*RFGEDTSTSDETGL
Trigger: GAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp AGGGACTCCTGGGAGTCAAAGTCCTCTTTGCACTGGGGGCACGCTTaGTTCCGCAGCAGCAGCTCCAGGTGCAGCTTCAGGTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RDSWESKSSLHWGHA*FRSSSSRCSFRWVW
Trigger: CCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTCCCAGGAGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp CTCCGACGCGTCCACGTCATCCTCGCTGGCCTCATGGCTGTTAGGTaGCTCAGGGTTCTTAAGCAGCATGCCCTGCAGGTCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LRRVHVILAGLMAVR*LRVLKQHALQVSRL
Trigger: GAGCCTGCTGACCTGCAGGGCATGCTGCTTAAGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGTGGACGCGTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp TTCCGGGGCCCACTGGTCTCCGGCGTGAGGTCACGGTGGTCCACCTaGATGTGGCTCTCCAGGTCTTCGGCACTCTCAAACTTGACACTG +
Preference number: 5 (lower is better)
Translates to: FRGPLVSGVRSRWST*MWLSRSSALSNLTL
Trigger: CAGTGTCAAGTTTGAGAGTGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CCGTACATGGGCTCCGACGCGTCCACGTCATCCTCGCTGGCCTCATaGCTGTTAGGTGCCTCAGGGTTCTTAAGCAGCATGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PYMGSDASTSSSLAS*LLGASGFLSSMPCR
Trigger: CCTGCAGGGCATGCTGCTTAAGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGTGGACGCGTCGGAGCCCATGTACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GGCCCACTGGTCTCCGGCGTGAGGTCACGGTGGTCCACCTGCATGTaGCTCTCCAGGTCTTCGGCACTCTCAAACTTGACACTGCACTCG +
Preference number: 5 (lower is better)
Translates to: GPLVSGVRSRWSTCM*LSRSSALSNLTLHS
Trigger: CGAGTGCAGTGTCAAGTTTGAGAGTGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGACCAGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CTGTCAGAGTCCTGGGGCTGTTTTGCATTACCTCCAGGACAGCGGTaGGCCCGGTGGTCCGTCAGGTCTGCCAGAGACTCGAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSESWGCFALPPGQR*ARWSVRSARDSKSC
Trigger: GCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGACTCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCGGTCACGGCTCCTCTaGTGCTTGAAGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGERSRLL*CLKRRL
Trigger: CAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGACCG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGACTGACACTGTGGTaGCTGGAGTCGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRGLTLW*LESGCR
Trigger: CCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCTGCTCCTGCAGGCTATaGATGTCGGCGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVCSCRL*MSANIS
Trigger: CGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCA...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCGGGCTCTGCTCGGCCTaGGACTTCTTGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LISMTGNLRLLPGSALQSGLCSA*DFLLWA
Trigger: GGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCC...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCATTGGAGATGGAGTaGGCGCTTGCTGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWPLEME*ALAESR
Trigger: GCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp AGGTGCCCGTGTCCAGGCTCTTGCTGTGGGTCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGAAGCGCTCACCACAGATGGGACACA +
Preference number: 5 (lower is better)
Translates to: RCPCPGSCCGSPCVR*ASAAKGSAHHRWDT
Trigger: TGTGTCCCATCTGTGGTGAGCGCTTCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACACGGGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp CAGACCACACAGCGGAAGCCCGTGAGTGAGTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATAAACTCCTCCTCGCTCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QTTQRKPVSELRRSG*IWQCSINSSSLCRG
Trigger: GCCCCTGCAGAGCGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCCTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTGTGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CAGCATGCCCTGCAGGTCAGCAGGCTCAGCTTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGTGCCGTTCTCGGTCGCAGCATCAAA +
Preference number: 5 (lower is better)
Translates to: QHALQVSRLSFLGGH*GYPIGRAVLGRSIK
Trigger: TTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CCATTGGGGGAGGACGCCGCTGAGCTGCCCGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTGAGCTCAAGCGTGGAAGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: PLGEDAAELPASFCM*KVPWILSSSVEVTV
Trigger: GACAGTCACTTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGGCCACCCAGGAGAGTaGTGGGTCGTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEGHPGE*WVVITI
Trigger: GATGGTGATGACGACCCACAACTCTCCTGGGTGGCC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGGTCACGGCTCCTCTaGTGCTTGAAGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRRSRLL*CLKRRL
Trigger: CAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGACCG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCGGTCACGGCTCCTCTaGTGCTTGAAGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVRSRLL*CLKRRL
Trigger: CAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGACCG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCGCCCGTATGCAGCTaGATGTGCCGGTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRSPVCS*MCRSRL
Trigger: GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGGCTCTGCTGGGGCTaGTCCGCGTGGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAWLCWG*SAWMVF
Trigger: GAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAGCACTGGGGGCACGCTaGCTTCCGCAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGALGAR*LPQQQL
Trigger: GAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGC...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRIGGTP*AVPFSV
Trigger: GACCGAGAACGGCACGGCCAATGGGGTACCCCCAAT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRLCRGI*QMRQVP
Trigger: GGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRLCRGI*QMRQVP
Trigger: GGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAAGCCCGTGAGTGAGTaGCGCAGGTCAGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEKPVSE*RRSGCI
Trigger: GATGCACCCTGACCTGCGCAACTCACTCACGGGCTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCACCCACCTGTCCGTaGGCGCTGCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRPPTCP*ALRAMQ
Trigger: CTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp GTCGGGCTGCCGGTGGCTGTCCAGGTGGCAGTAGACACCTTCCACTaGGGAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VGLPVAVQVAVDTFH*GELLRAHGALVFLV
Trigger: AACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTACTGCCACCTGGACAGCCACCGGCAGCCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp ACCCCATTGGCCGTGCCGTTCTCGGTCGCAGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTCTCCAGCAGGATGATGGCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TPLAVPFSVAASNTQ*FSRRCFSSRMMAWK
Trigger: CTTCCACGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp CAGGCTCAGCTTTCTTGGTGGCCATTGGGGGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCATCAAACACACAGTGCTTCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: QAQLSWWPLGVPHWP*RSRSQHQTHSASPA
Trigger: TGCGGGAGAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TGGAGCACTGGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGGAGACGCGGATGTGCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: WSTGCRRKHYYRQRG*RWGRSGRRGCAPAG
Trigger: GCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GGCTGCACCACCGGAGACTCTAGTTTGGCACTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCGGTGAGGGAGGACTCAGTAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GCTTGDSSLALPTLQ*ACWMCSVREDSVRK
Trigger: TTTCCTTACTGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGTCGCCCGTATGCAGCTaGATGTGCCGGTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: GRATHLPACIQQRGKPTLSPVCS*MCRSRL
Trigger: GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGA...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCTTCAGGTGGATCTaGAGGTGGTCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRVFRWI*RWSLRE
Trigger: CTCCCGCAGCGACCACCTCAAGATCCACCTGAAGAC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILVHLKG*LELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCAC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEEEKPR*HTVHLK
Trigger: CTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGETGDSS*ALPTLQ
Trigger: CTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGGCTCTGCTCGGCCTaGGACTTCTTGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLGLCSA*DFLLWA
Trigger: GGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGAGTCAAAGTCCTCTTaGCACTGGGGGCACGCTTGC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEESKSS*HWGHAC
Trigger: GCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTC...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTIGGTP*AVPFSV
Trigger: GACCGAGAACGGCACGGCCAATGGGGTACCCCCAAT...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRLSWWP*GVPHWP
Trigger: CGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTTGCTGCGGAACTCCTaGAGGCACAGGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: LISMTGNLRLLPGSALQSLLRNS*RHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTGCTGCGGAACTCCTaGAGGCACAGGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRLLRNS*RHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATCGGCACTCTCAAACTaGACACTGCACTCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPSALSN*TLHSGQ
Trigger: TTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACGGAGAGGTGTCCTGTaGAGCGATCCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRRRGVL*SDPSLC
Trigger: GCACAGTGAGGGATCGCTCAACAGGACACCTCTCCG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp TTGGCCAGATGCTCCTTGTTCTTTTTGTGGGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAGAAGCCGCGCTTGCACACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LARCSLFFLWACMWL*SELVEEKPRLHTVH
Trigger: GTGCACTGTGTGCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp TCCTTCTCCGACTTGGCCAGATGCTCCTTGTTCTTTTTGTGGGCCTaGATGTGGCTCTGCAGCGAGCTGGTGGAGGAGAAGCCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SFSDLARCSLFFLWA*MWLCSELVEEKPRL
Trigger: CAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp GACTCTAGTTTGGCACTGCCCACACTGCAGTGGGCCTGCTGGATGTaGTCGGTGAGGGAGGACTCAGTAAGGAAACCCATGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: DSSLALPTLQWACWM*SVREDSVRKPMEHW
Trigger: CCAGTGCTCCATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp ACCACCGGAGACTCTAGTTTGGCACTGCCCACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGGGAGGACTCAGTAAGGAAACCCATG +
Preference number: 5 (lower is better)
Translates to: TTGDSSLALPTLQWA*WMCSVREDSVRKPM
Trigger: CATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp GCAAGCCTTCTGCGGAGAGGTGTCCTGTTGAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTGGTTCTGCAGCTCGGTCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: ASLLRRGVLLSDPSL*VLAHRVVLQLGLEE
Trigger: TTCTTCCAGACCGAGCTGCAGAACCACACGATGAGCCAGCACGCACAGTGAGGGATCGCTCAACAGGACACCTCTCCGCAGAAGGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp ATCACCATCTCCAGGACAGCGGTGGGCCCGGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTGCTGACAGTGATCGCAGGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: ITISRTAVGPVVRQV*QRLEVLLTVIAGVN
Trigger: ATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
CDS GCA 90 bp TGCATTACCTCCAGGACAGCGGTGGGCCCGGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTGCTGACAGTGATCGCAGGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: CITSRTAVGPVVRQV*QRLEVLLTVIAGVN
Trigger: ATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CCA 90 bp CACAACCATCTCCGATCATCTGCGTGGGTGACGCAACATCCTTGCTaGAGGGAGACGAGGCCACCCAGGAGAGTTGTGGGTCGTCATCAC +
Preference number: 5 (lower is better)
Translates to: HNHLRSSAWVTQHPC*RETRPPRRVVGRHH
Trigger: GTGATGACGACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TCAGGGCACATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTGTTCTCGTCGACGAAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SGHMGHLCFWLAWAW*IWASSVFSSTKTSG
Trigger: CCCTGAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CATGTGTGGCTCTGCTGGGGCTTGTCCGCGTGGATGGTCTTCAGGTaGATCTCCAGCACGGCCAGGCTGTTAAAGTCCCGCTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: HVWLCWGLSAWMVFR*ISSTARLLKSRLEQ
Trigger: TTGTTCCAAGCGGGACTTTAACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCACACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp ACCGGAGACTCTAGTTTGGCACTGCCCACACTGCAGTGGGCCTGCTaGATGTGCTCGGTGAGGGAGGACTCAGTAAGGAAACCCATGGAG +
Preference number: 5 (lower is better)
Translates to: TGDSSLALPTLQWAC*MCSVREDSVRKPME
Trigger: CTCCATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GGTCAGCAGGCTCAGCTTTCTTGGTGGCCATTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCGCAGCATCAAACACACAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GQQAQLSWWPLGVPH*PCRSRSQHQTHSAS
Trigger: AGAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAAGCGGATGAAGGACTaGTCGCAGAACTGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEKRMKD*SQNWQG
Trigger: CCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGACTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGLVGVG*VDMGEQ
Trigger: CTGCTCGCCCATATCCACCAAGCCCACGCCAACCAG...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLLVGVG*VDMGEQ
Trigger: CTGCTCGCCCATATCCACCAAGCCCACGCCAACCAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRTGDSS*ALPTLQ
Trigger: CTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAGTCAAAGTCCTCTTaGCACTGGGGGCACGCTTGC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRESKSS*HWGHAC
Trigger: GCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGACCGAGGAAAATTGCTaGTCGCAGCTCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWTEENC*SQLSHT
Trigger: TGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGT...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLIGGTP*AVPFSV
Trigger: GACCGAGAACGGCACGGCCAATGGGGTACCCCCAAT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCCCGTGTCCAGGCTCTaGCTGTGGGTCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTPVSRL*LWVTLC
Trigger: ACACAAGGTGACCCACAGCAAGAGCCTGGACACGGG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLLCRGI*QMRQVP
Trigger: GGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRFTRSC*LRNSLR
Trigger: CCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCGGCACTCTCAAACTaGACACTGCACTCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESALSN*TLHSGQ
Trigger: TTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCGGAGAGGTGTCCTGTaGAGCGATCCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTRRGVL*SDPSLC
Trigger: GCACAGTGAGGGATCGCTCAACAGGACACCTCTCCG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCTCTTCCCACTGCTCTaGGACTGCCCACCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVLFPLL*DCPPPL
Trigger: TAAGGGAGGTGGGCAGTCCAAGAGCAGTGGGAAGAG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp TGTCGCTGTGGATCTGCTCGTGCCTCTTCAAGTAGCTCAAGCGGATaGAGGACTTGTCGCAGAACTGGCAAGGGTATGGCAGGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: CRCGSARASSSSSSG*RTCRRTGKGMAGPC
Trigger: GCACGGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACTTGAAGAGGCACGAGCAGATCCACAGCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp CAAAGATGGGGGAGTTGGTGCAGTAGGGGCAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCACCACCGGAGACTCTAGTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QRWGSWCSRGRNRPP*RTAWAAPPETLVWH
Trigger: GTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp TTGATTGCAAGGATACTCCCCATTGGAGATGGAGTTGGCGCTTGCTaGGAGCCGCTGCCGCTTCGGGGAAGACACCTCCACATCGGACGA +
Preference number: 5 (lower is better)
Translates to: LIARILPIGDGVGAC*EPLPLRGRHLHIGR
Trigger: TCGTCCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp TGGAAGGTGCCATGGATCTTGAGCTCAAGCGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGGAAGCCCGTGAGTGAGTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: WKVPWILSSSVEVTV*MQTTQRKPVSELRR
Trigger: CCTGCGCAACTCACTCACGGGCTTCCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGTGTGTTCTCGTCGACGAAGACCTCA +
Preference number: 5 (lower is better)
Translates to: CSGHMGHLCFWLAWA*WIWASSVFSSTKTS
Trigger: TGAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCGAGCAGTGTGTTCTCGTCGACGAAG +
Preference number: 5 (lower is better)
Translates to: ENCSGHMGHLCFWLA*AWWIWASSVFSSTK
Trigger: CTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CTGAGGAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATATGGGCGAGCAGTGTGTTCTCGTCGA +
Preference number: 5 (lower is better)
Translates to: LRRTAQGTWGTCVSG*RGLGGYGRAVCSRR
Trigger: TCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TCCACTGAGGAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGGATATGGGCGAGCAGTGTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: STEENCSGHMGHLCF*LAWAWWIWASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp AAGAAAGCATTATTACCGTCAGAGGGGTTGGCGTTGGGGCCGCAGTaGGAGACGCGGATGTGCTCCTGCAGGCTATTGATGTCGGCGAAC +
Preference number: 5 (lower is better)
Translates to: KKALLPSEGLALGPQ*ETRMCSCRLLMSAN
Trigger: GTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GGGAAGACACCTCCACATCGGACGAGACTGGGCTCTGCTCGGCCTTaGACTTCTTGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GKTPPHRTRLGSARP*TSCCGPVECSCGSP
Trigger: AGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp GCTGTTGCTATGTCCAATTACCCGTGTAACCACCTGTCAGAGTCCTaGGGCTGTTTTGCATTACCTCCAGGACAGCGGTGGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: AVAMSNYPCNHLSES*GCFALPPGQRWARW
Trigger: CCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGACTCTGACAGGTGGTTACACGGGTAATTGGACATAGCAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTGTCTTCAGGTGGATCTaGAGGTGGTCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPVFRWI*RWSLRE
Trigger: CTCCCGCAGCGACCACCTCAAGATCCACCTGAAGAC...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTEEKPR*HTVHLK
Trigger: CTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTC...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEHLCFW*AWAWWI
Trigger: TATCCACCAAGCCCACGCCAACCAGAAACACAAGTG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGGGCACATGGGGCACTaGTGTTTCTGGTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLGHMGH*CFWLAW
Trigger: CCACGCCAACCAGAAACACAAGTGCCCCATGTGCCC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCTGGTTCTTGTGCAGCTaGCGAACGTGCTCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LISMTGNLRLLPGSALQSWFLCS*RTCSLR
Trigger: CCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTTGCTCCTGCAGGCTATaGATGTCGGCGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLACSCRL*MSANIS
Trigger: CGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCA...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHTGDSS*ALPTLQ
Trigger: CTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGCAAGGATACTCCCCATaGGAGATGGAGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEQGYSP*EMELAL
Trigger: AAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTG...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGACTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCG +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGLSWWP*GVPHWP
Trigger: CGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGTTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: GRATHLPACIQQRGKPTLLLWVT*CSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAA...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCCGTGTCCAGGCTCTaGCTGTGGGTCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLPVSRL*LWVTLC
Trigger: ACACAAGGTGACCCACAGCAAGAGCCTGGACACGGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGAAAGCCCGTGAGTGAGTaGCGCAGGTCAGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGKPVSE*RRSGCI
Trigger: GATGCACCCTGACCTGCGCAACTCACTCACGGGCTT...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATCGGCACTCTCAAACTaGACACTGCACTCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRSALSN*TLHSGQ
Trigger: TTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCCACCTGGAGTCCGAGTCGAACATCTGGTaGCACAGCTTACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: QSPVTHLRASEPKCHLESESNIW*HSLHSW
Trigger: CCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTC...GGACTCCAGGTGGCACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGAAACACACGGGGCATTaGAAGGTGCCGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLKHTGH*KVPPMP
Trigger: GGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCGGAGAGGTGTCCTGTaGAGCGATCCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPRRGVL*SDPSLC
Trigger: GCACAGTGAGGGATCGCTCAACAGGACACCTCTCCG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGAGCTGCACGTTACCCTaGGGCCTCTGTTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: GRATHLPACIQQRGKPTLSCTLP*GLCFPI
Trigger: GATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCT...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAA +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRGRATH*PACIQQ
Trigger: TTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCCATTTACTGGCATGCTaGCCTGTGCCACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LISMTGNLRLLPGSALQSHLLAC*PVPLWP
Trigger: AGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATG...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGCTCTTCCCACTGCTCTaGGACTGCCCACCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTLFPLL*DCPPPL
Trigger: TAAGGGAGGTGGGCAGTCCAAGAGCAGTGGGAAGAG...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS CCA 90 bp TCTCCTCTTGACTTGTCACGCTGTTCCTGTCTTCCAGCGCACGGCTaGTTTTCTGATCGCACTCTGGCTCTCCTTCTAGGCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SPLDLSRCSCLPAHG*FSDRTLALLLGLLL
Trigger: CAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561648.5
ENST00000562520.1
ENST00000563137.7
ENST00000568094.2
CDS-3UTR CAA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACGGCCACCCAGGAGAGTaGTGGGTCGTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDGHPGE*WVVITI
Trigger: GATGGTGATGACGACCCACAACTCTCCTGGGTGGCC...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTCACTTGAACGGCAGCTaGTCGCTGTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPHLNGS*SLWICS
Trigger: CGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTG...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTCGCCCGTATGCAGCTaGATGTGCCGGTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSPVCS*MCRSRL
Trigger: GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGATTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRLARCS*FFLWAC
Trigger: GCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATACCACCTGATGGTAAAGAATGCCAGTCCCAGGAAGGGCCTCAGGGTCCCCACTGGTTCTTGTGCAGCTaGCGAACGTGCTCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: IPPDGKECQSQEGPQGPHWFLCS*RTCSLR
Trigger: CCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA...GTGGGGACCCTGAGGCCCTTCCTGGGACTGGCATTCTTTACCATCAGGTGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACAAGGATACTCCCCATaGGAGATGGAGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRQGYSP*EMELAL
Trigger: AAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTGGAAGCTCTCAAAGTaGGAGAACTTGAGGTCGCAT +
Preference number: 5 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWWKLSK*ENLRSH
Trigger: ATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGGAGTCAAAGTCCTCTTaGCACTGGGGGCACGCTTGC +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLESKSS*HWGHAC
Trigger: GCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTC...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACCCAGGTGGCTGTGTTaGACGTGCACCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRPRWLC*TCTCRS
Trigger: TGACCTGCAGGTGCACGTCAAACACAGCCACCTGGG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAAGGTGCCATGGATCTaGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRKVPWI*SSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCTTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCFTRSC*LRNSLR
Trigger: CCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAA...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGFTRSC*LRNSLR
Trigger: CCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCCACCCACCTGTCCGTaGGCGCTGCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTPPTCP*ALRAMQ
Trigger: CTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CTGCCTCACTCCAGACCTGGCCCCCGCCACCAGTCTCAATGCTCTCACATCCTAGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: LPHSRPGPRHQSQCSHILVGNVD*DLSLVL
Trigger: GAGAACGAGAGAGAGATCCAAATCCACGTTGCCAAC...TAGGATGTGAGAGCATTGAGACTGGTGGCGGGGGCCAGGTCTGGAGTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAAACACACGGGGCATTaGAAGGTGCCGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDKHTGH*KVPPMP
Trigger: GGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGAAAACACACGGGGCATTaGAAGGTGCCGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRKHTGH*KVPPMP
Trigger: GGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTT...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGGGGAGCAGGGTCTATaGTGTGCAGGTCCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTGEQGL*CAGPQG
Trigger: CCCTTGGGGACCTGCACACAATAGACCCTGCTCCCC...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp TCACAGGGTAGGCATGGTTCTTGTGCAGCTTGCGAACGTGCTCGTTaGGGTTGTAGAGGGTGGGCATGGAGTCCAGGCAGATCTGACATG +
Preference number: 5 (lower is better)
Translates to: SQGRHGSCAACERAR*GCRGWAWSPGRSDM
Trigger: CATGTCAGATCTGCCTGGACTCCATGCCCACCCTCTACAACCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCATGCCTACCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 90 bp CGGCGAACATCTCGGGGCAGTAGTTGCAGTGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGTAGGCATGGTTCTTGTGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: RRTSRGSSCSGRQRC*QTASQGRHGSCAAC
Trigger: GCAAGCTGCACAAGAACCATGCCTACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCCACTGCAACTACTGCCCCGAGATGTTCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp AGGAAAATTGCTTGTCGCAGCTCTCGCACACATAGTGGGTCGACGTaGTCATGTAATGCACTGTCAGGTGCTGCAGGAGGGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RKIACRSSRTHSGST*SCNALSGAAGGTPG
Trigger: CCCAGGAGTCCCTCCTGCAGCACCTGACAGTGCATTACATGACCACGTCGACCCACTATGTGTGCGAGAGCTGCGACAAGCAATTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TCTCCTCTTGACTTGTCACGCTGTTCCTGTCTTCCAGCGCACGGCTaGTTTTCTGATCGCACTCTGGCTCTCCTTCTAGGCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: SPLDLSRCSCLPAHG*FSDRTLALLLGLHG
Trigger: ACCATGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562871.5
CDS-3UTR CAA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAAGCGGATGAAGGACTaGTCGCAGAACTGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCKRMKD*SQNWQG
Trigger: CCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWPMEHW*QKKALL
Trigger: TAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGG...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACCTGCCTGCTTCTGGGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGTTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: YLPASGHSGQVFHDRGLWFLWFS*MCLVSF
Trigger: GAAACTCACCAAGCACATCAAGGAGAACCACAAGAA...CCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCCCAGAAGCAGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCACTGGGGGCACGCTaGCTTCCGCAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTALGAR*LPQQQL
Trigger: GAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAATAAACTCAGCCTTCTaGCGTGAGCCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRINSAF*REPSSS
Trigger: CGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTAT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTTGCTGCGGAACTCCTaGAGGCACAGGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTLLRNS*RHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTCCTCAATCATGTGGTaGGCAACGTGGATTTGGATC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGESSIMW*ATWIWI
Trigger: GATCCAAATCCACGTTGCCAACCACATGATTGAGGA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTTCTCTCCTCTTGACTaGTCACGCTGTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEFSPLD*SRCSCL
Trigger: AAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGCACTCTGGGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATGGATTCCCTTTATaGAACTGTACTAGTTACTGC +
Preference number: 5 (lower is better)
Translates to: GTLGRCSMTGACGPRVLVHGFPL*NCTSYC
Trigger: GCAGTAACTAGTACAGTTCAATAAAGGGAATCCATG...GACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCCCAGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS GCA 90 bp CACATGAAGTCGTCCTTCTTGGCTTCCTTCTCCGACTTGGCCAGATaGTCCTTGTTCTTTTTGTGGGCCTGCATGTGGCTCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: HMKSSFLASFSDLAR*SLFFLWACMWLCSE
Trigger: CTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp CGAGACTGGGCTCTGCTCGGCCTTGGACTTCTTGCTGTGGGCCAGTaGAATGTTCTTGTGGTTCTCCTTGATGTGCTTGGTGAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: RDWALLGLGLLAVGQ*NVLVVLLDVLGEFQ
Trigger: CTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTTACTGAGGGCTCACCTGGGCTCCATGGGGTTTGGGATAAATCCAGAGCTGGATTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VTEGSPGLHGVWDKSRAGLARCS*FFLWAC
Trigger: GCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA...TCCAGCTCTGGATTTATCCCAAACCCCATGGAGCCCAGGTGAGCCCTCAGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRFSLMC*VSFRME
Trigger: CTCCATCCTGAAACTCACCAAGCACATCAAGGAGAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGATTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRFSLMC*VSFRME
Trigger: CTCCATCCTGAAACTCACCAAGCACATCAAGGAGAA...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGTTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEFLWFS*MCLVSF
Trigger: GAAACTCACCAAGCACATCAAGGAGAACCACAAGAA...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATGGAAGCTCTCAAAGTaGGAGAACTTGAGGTCGCAT +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRWKLSK*ENLRSH
Trigger: ATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATCGGCACTCTCAAACTaGACACTGCACTCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRSALSN*TLHSGQ
Trigger: TTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAGAAGGTCATCTGGCACTaGATGCACTGGTATGTCTTT +
Preference number: 5 (lower is better)
Translates to: VMFKWPSPRRLRQAFCGEKVIWH*MHWYVF
Trigger: AAAGACATACCAGTGCATCAAGTGCCAGATGACCTT...CTCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGAAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRSLHSW*MPSSIM
Trigger: CATGATTGAGGAAGGCATCAACCACGAGTGTAAGCT...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGATGTGCTGCTGCAACTaGTTGGCCTGGACGAAGACT +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLMCCCN*LAWTKT
Trigger: AGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACAT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGCTCTGCTCTGCAGTCCCCAGTCACACATCTCCGTGCCTCAGAACCCAAGTGCTCATTTCTCTCCTCTaGACTTGTCACGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: WLCSAVPSHTSPCLRTQVLISLL*TCHAVP
Trigger: AGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAG...CACTTGGGTTCTGAGGCACGGAGATGTGTGACTGGGGACTGCAGAGCAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCAGAGGAAGGGATGGATTaGAGTTTTGGTCCTATTTAC +
Preference number: 5 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPEEGMD*SFGPIY
Trigger: GTAAATAGGACCAAAACTCAAATCCATCCCTTCCTC...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGCAGGTGTTCCATGACAGGGGCCTGTGGCCCAAGGGTCCTGGTCCATTTCCCATACTCAAGTAGGGGTTaGACTAAGCATTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRCSMTGACGPRVLVHFPYSSRG*TKHFSL
Trigger: CAGAGAGAAATGCTTAGTCAAACCCCTACTTGAGTA...TGGGAAATGGACCAGGACCCTTGGGCCACAGGCCCCTGTCATGGAACACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5
CDS TCA 90 bp CGTGGATTTGGATCTCTCTCTCGTTCTCGAAGGTCATCTGGCACTTaGTGCACTGGTATGTCTTTTTCCGGGGCACTGGCGATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: RGFGSLSRSRRSSGT*CTGMSFSGALAMSG
Trigger: CCCAGACATCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTCGCCCGTATGCAGCTaGATGTGCCGGTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSPVCS*MCRSRL
Trigger: GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRCSLFF*WACMWL
Trigger: GAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGGACTGACACTGTGGTaGCTGGAGTCGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNGLTLW*LESGCR
Trigger: CCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTCCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAPMEHW*QKKALL
Trigger: TAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGG...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGATTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRFLWFS*MCLVSF
Trigger: GAAACTCACCAAGCACATCAAGGAGAACCACAAGAA...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAAGGATACTCCCCATaGGAGATGGAGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: GLCVQPFVRHHFIQASQRQGYSP*EMELAL
Trigger: AAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTG...TCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTACATCTTCTTCTCATaGCTGTGCTTCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPYIFFS*LCFTAR
Trigger: CCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGATAAACTCAGCCTTCTaGCGTGAGCCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLINSAF*REPSSS
Trigger: CGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTAT...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCTTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: GRSGYSIIKGSSALTPVALLWVT*CSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAA...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACAAGGTGCCATGGATCTaGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDKVPWI*SSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCACCCACCTGTCCGTaGGCGCTGCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPPTCP*ALRAMQ
Trigger: CTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGACATACTGGTCCCATCGACAGTCCCAGCACTGCCCAAAAGGTAGGCCTGGCTAAGGTCATCTGGCACTaGATGCACTGGTATGTCTTT +
Preference number: 5 (lower is better)
Translates to: GHTGPIDSPSTAQKVGLAKVIWH*MHWYVF
Trigger: AAAGACATACCAGTGCATCAAGTGCCAGATGACCTT...AGCCAGGCCTACCTTTTGGGCAGTGCTGGGACTGTCGATGGGACCAGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAAGCCCCTGCCTCAGCAAGGCCTTCCTTAATGCACCCCTGTGTCTCATACACGTTCTCTCCTCTTGACTaGTCACGCTGTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: QAPASARPSLMHPCVSYTFSPLD*SRCSCL
Trigger: AAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAA...CGTGTATGAGACACAGGGGTGCATTAAGGAAGGCCTTGCTGAGGCAGGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCGGGGCCCTGCCTGTaGCAATGCGGCAGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPGPCL*QCGSPG
Trigger: CCCCGGACTGCCGCATTGCAACAGGCAGGGCCCCGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTCACGGCTTCTGCATTaGCAGTGTTCTCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPSRLLH*QCSLPT
Trigger: AGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS CCA 90 bp ATGTGCTCGGTGAGGGAGGACTCAGTAAGGAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGGTTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: MCSVREDSVRKPMEH*LQKKALLPSEGLAL
Trigger: CAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTCACTTGAACGGCAGCTaGTCGCTGTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: DFSHDSFSTETETLTCLLHLNGS*SLWICS
Trigger: CGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTG...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCGGTCACGGCTCCTCTaGTGCTTGAAGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNRSRLL*CLKRRL
Trigger: CAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGACCG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTCTTCAGGTGGATCTaGAGGTGGTCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVFRWI*RWSLRE
Trigger: CTCCCGCAGCGACCACCTCAAGATCCACCTGAAGAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACATGAAGTCGTCCTTCTaGGCTTCCTTCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDMKSSF*ASFSDL
Trigger: CAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCAT...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGGGCACATGGGGCACTaGTGTTTCTGGTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTGHMGH*CFWLAW
Trigger: CCACGCCAACCAGAAACACAAGTGCCCCATGTGCCC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCCATTGGAGATGGAGTaGGCGCTTGCTGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTPLEME*ALAESR
Trigger: GCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGCACTGGGGGCACGCTaGCTTCCGCAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKALGAR*LPQQQL
Trigger: GAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCCCAGGTGGCTGTGTTaGACGTGCACCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTPRWLC*TCTCRS
Trigger: TGACCTGCAGGTGCACGTCAAACACAGCCACCTGGG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCACCACCCACCTGTCCGTaGGCGCTGCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAPPTCP*ALRAMQ
Trigger: CTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGG...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTGCAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: PAHGFCICSVLFPLLLDCSLHSW*MPSSIM
Trigger: CATGATTGAGGAAGGCATCAACCACGAGTGTAAGCT...GCAGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CTGATCTCTATGACTGGGAACCTGCGGCTCCTACCTGGCTCTGCTCTGCAGTCCGAGGAAGGGATGGATTaGAGTTTTGGTCCTATTTAC +
Preference number: 5 (lower is better)
Translates to: LISMTGNLRLLPGSALQSEEGMD*SFGPIY
Trigger: GTAAATAGGACCAAAACTCAAATCCATCCCTTCCTC...GGACTGCAGAGCAGAGCCAGGTAGGAGCCGCAGGTTCCCAGTCATAGAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS TCA 90 bp AGGTGGGTCTGGAAGCTCTCAAAGTTGGAGAACTTGAGGTCGCATTaGTTGCAAGGATACTCCCCATTGGAGATGGAGTTGGCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: RWVWKLSKLENLRSH*LQGYSPLEMELALA
Trigger: AGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAGACCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 90 bp GGTGCAGCTTCAGGTGGGTCTGGAAGCTCTCAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAGGATACTCCCCATTGGAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: GAASGGSGSSQSWRT*GRIDCKDTPHWRWS
Trigger: ACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 90 bp TTGGCAACGTGGATTTGGATCTCTCTCTCGTTCTCGAAGGTCATCTaGCACTTGATGCACTGGTATGTCTTTTTCCGGGGCACTGGCGAT +
Preference number: 5 (lower is better)
Translates to: LATWIWISLSFSKVI*HLMHWYVFFRGTGD
Trigger: ATCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACGTTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCACTTGAACGGCAGCTaGTCGCTGTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTHLNGS*SLWICS
Trigger: CGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTVHLKG*LELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCAC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGACTGACACTGTGGTaGCTGGAGTCGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGLTLW*LESGCR
Trigger: CCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGCTCTGCTGGGGCTaGTCCGCGTGGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWLCWG*SAWMVF
Trigger: GAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTGGATGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: IGCNVQMALPTASPASLLPMEHW*QKKALL
Trigger: TAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGG...CAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CCTCTAAGGCCCCTCACAGTTGAAAGGCAAGTGTCTCATCCCAGCTCCAGACCTTTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: PLRPLTVERQVSHPSSRPFLWFS*MCLVSF
Trigger: GAAACTCACCAAGCACATCAAGGAGAACCACAAGAA...AGGTCTGGAGCTGGGATGAGACACTTGCCTTTCAACTGTGAGGGGCCTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGGCTCTGCTCGGCCTaGGACTTCTTGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGLCSA*DFLLWA
Trigger: GGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGGGCTCTGCTCGGCCTaGGACTTCTTGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKGLCSA*DFLLWA
Trigger: GGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTCTCTGTGTGCAGCCCTTTGTCAGGCATCACTTCATACAAGCCTCCCAGAGACTGGAAGCTCTCAAAGTaGGAGAACTTGAGGTCGCAT +
Preference number: 5 (lower is better)
Translates to: VSVCSPLSGITSYKPPRDWKLSK*ENLRSH
Trigger: ATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA...GTCTCTGGGAGGCTTGTATGAAGTGATGCCTGACAAAGGGCTGCACACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGCACTGGGGGCACGCTaGCTTCCGCAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIALGAR*LPQQQL
Trigger: GAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGAGTCAAAGTCCTCTTaGCACTGGGGGCACGCTTGC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTESKSS*HWGHAC
Trigger: GCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTATAAACTCAGCCTTCTaGCGTGAGCCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTINSAF*REPSSS
Trigger: CGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTAT...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLLWVT*CSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLCRGI*QMRQVP
Trigger: GGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGAAGGGCTACCCACTTGCCTGCCTGTATCCAACAAAGGGGAAAGCCAACCCTGGATCGCAGGTGTAAATaGATTCATCCTCCATGTCTT +
Preference number: 5 (lower is better)
Translates to: GRATHLPACIQQRGKPTLDRRCK*IHPPCL
Trigger: AAGACATGGAGGATGAATCAATTTACACCTGCGATC...CAGGGTTGGCTTTCCCCTTTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGCCCAAGGGTCCTGGTCCATTTCCCAGCCTGGGCAAAATTCCTCTGCCCAGACATGGATTCCCTTTATaGAACTGTACTAGTTACTGC +
Preference number: 5 (lower is better)
Translates to: WPKGPGPFPSLGKIPLPRHGFPL*NCTSYC
Trigger: GCAGTAACTAGTACAGTTCAATAAAGGGAATCCATG...TCTGGGCAGAGGAATTTTGCCCAGGCTGGGAAATGGACCAGGACCCTTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGTAATGTTCAAATGGCCCTCCCCACGGCGTCTCCGGCAAGCCTTCTGCGGAGACATGGATTCCCTTTATaGAACTGTACTAGTTACTGC +
Preference number: 5 (lower is better)
Translates to: CNVQMALPTASPASLLRRHGFPL*NCTSYC
Trigger: GCAGTAACTAGTACAGTTCAATAAAGGGAATCCATG...TCTCCGCAGAAGGCTTGCCGGAGACGCCGTGGGGAGGGCCATTTGAACATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLVGVG*VDMGEQ
Trigger: CTGCTCGCCCATATCCACCAAGCCCACGCCAACCAG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGGCTCTGCTGGGGCTaGTCCGCGTGGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALWLCWG*SAWMVF
Trigger: GAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTGGTTCTTGTGCAGCTaGCGAACGTGCTCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTWFLCS*RTCSLR
Trigger: CCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GGAAGATCAGGGTATTCCATCATTAAGGGGTCTTCTGCTTTGACTCCTGTGGCCGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCC +
Preference number: 5 (lower is better)
Translates to: GRSGYSIIKGSSALTPVAELEVA*IARILP
Trigger: GGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTC...GGCCACAGGAGTCAAAGCAGAAGACCCCTTAATGATGGAATACCCTGATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATTGCTGCGGAACTCCTaGAGGCACAGGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVLLRNS*RHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TTCCAGCTCACGGCTTCTGCATTTGCAGTGTTCTCTTCCCACTGCTCTTGGACTTCCTCAATCATGTGGTaGGCAACGTGGATTTGGATC +
Preference number: 5 (lower is better)
Translates to: FQLTASAFAVFSSHCSWTSSIMW*ATWIWI
Trigger: GATCCAAATCCACGTTGCCAACCACATGATTGAGGA...AGTCCAAGAGCAGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATAGCTGCACGTTACCCTaGGGCCTCTGTTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNSCTLP*GLCFPI
Trigger: GATGGGGAAACAGAGGCCCAAGGGTAACGTGCAGCT...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGCCACCCAGGAGAGTaGTGGGTCGTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGHPGE*WVVITI
Trigger: GATGGTGATGACGACCCACAACTCTCCTGGGTGGCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGGTGACGCAACATCCTaGCTGGAGGGAGACGAGGCC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAGDATS*LEGDEA
Trigger: GGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCGCCCGTATGCAGCTaGATGTGCCGGTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASPVCS*MCRSRL
Trigger: GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGTCTTCAGGTGGATCTaGAGGTGGTCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALVFRWI*RWSLRE
Trigger: CTCCCGCAGCGACCACCTCAAGATCCACCTGAAGAC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVEEKPR*HTVHLK
Trigger: CTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLARCS*FFLWAC
Trigger: GCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILVGVG*VDMGEQ
Trigger: CTGCTCGCCCATATCCACCAAGCCCACGCCAACCAG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGGGCACATGGGGCACTaGTGTTTCTGGTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLGHMGH*CFWLAW
Trigger: CCACGCCAACCAGAAACACAAGTGCCCCATGTGCCC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGCTCTGCTGGGGCTaGTCCGCGTGGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWLCWG*SAWMVF
Trigger: GAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCATTGGAGATGGAGTaGGCGCTTGCTGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPLEME*ALAESR
Trigger: GCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCATTGGAGATGGAGTaGGCGCTTGCTGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPLEME*ALAESR
Trigger: GCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGAGTCAAAGTCCTCTTaGCACTGGGGGCACGCTTGC +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVESKSS*HWGHAC
Trigger: GCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGACCGAGGAAAATTGCTaGTCGCAGCTCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTTEENC*SQLSHT
Trigger: TGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRIGGTP*AVPFSV
Trigger: GACCGAGAACGGCACGGCCAATGGGGTACCCCCAAT...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLSWWP*GVPHWP
Trigger: CGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLSWWP*GVPHWP
Trigger: CGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACCCGTGTCCAGGCTCTaGCTGTGGGTCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKPVSRL*LWVTLC
Trigger: ACACAAGGTGACCCACAGCAAGAGCCTGGACACGGG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCGTGTCCAGGCTCTaGCTGTGGGTCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPVSRL*LWVTLC
Trigger: ACACAAGGTGACCCACAGCAAGAGCCTGGACACGGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAAGCCCGTGAGTGAGTaGCGCAGGTCAGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKKPVSE*RRSGCI
Trigger: GATGCACCCTGACCTGCGCAACTCACTCACGGGCTT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAAGCCCGTGAGTGAGTaGCGCAGGTCAGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLKPVSE*RRSGCI
Trigger: GATGCACCCTGACCTGCGCAACTCACTCACGGGCTT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGCTGCGGAACTCCTaGAGGCACAGGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLLRNS*RHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGGAGTCGAACATCTGGTaGCACAGCTTACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTESNIW*HSLHSW
Trigger: CCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTC...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCGGAGAGGTGTCCTGTaGAGCGATCCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALRRGVL*SDPSLC
Trigger: GCACAGTGAGGGATCGCTCAACAGGACACCTCTCCG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGGGGAGCAGGGTCTATaGTGTGCAGGTCCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIGEQGL*CAGPQG
Trigger: CCCTTGGGGACCTGCACACAATAGACCCTGCTCCCC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GATTTCTCCCATGACAGTTTCTCCACTGAGACTGAAACCCTTACCTGCCTGCTTTCACGGCTTCTGCATTaGCAGTGTTCTCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: DFSHDSFSTETETLTCLLSRLLH*QCSLPT
Trigger: AGTGGGAAGAGAACACTGCAAATGCAGAAGCCGTGA...AAGCAGGCAGGTAAGGGTTTCAGTCTCAGTGGAGAAACTGTCATGGGAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGGCCACCCAGGAGAGTaGTGGGTCGTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRGHPGE*WVVITI
Trigger: GATGGTGATGACGACCCACAACTCTCCTGGGTGGCC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAAGCGGATGAAGGACTaGTCGCAGAACTGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVKRMKD*SQNWQG
Trigger: CCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCACTTGAACGGCAGCTaGTCGCTGTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALHLNGS*SLWICS
Trigger: CGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTCTTCAGGTGGATCTaGAGGTGGTCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVFRWI*RWSLRE
Trigger: CTCCCGCAGCGACCACCTCAAGATCCACCTGAAGAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKVHLKG*LELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCAC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLEEKPR*HTVHLK
Trigger: CTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALEEKPR*HTVHLK
Trigger: CTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGGGCACATGGGGCACTaGTGTTTCTGGTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIGHMGH*CFWLAW
Trigger: CCACGCCAACCAGAAACACAAGTGCCCCATGTGCCC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGGTTCTTGTGCAGCTaGCGAACGTGCTCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVWFLCS*RTCSLR
Trigger: CCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCTCCTGCAGGCTATaGATGTCGGCGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCSCRL*MSANIS
Trigger: CGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLTGDSS*ALPTLQ
Trigger: CTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATCAAGGATACTCCCCATaGGAGATGGAGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNQGYSP*EMELAL
Trigger: AAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTG...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGTACATCTTCTTCTCATaGCTGTGCTTCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTYIFFS*LCFTAR
Trigger: CCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTA...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCCCAGGTGGCTGTGTTaGACGTGCACCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIPRWLC*TCTCRS
Trigger: TGACCTGCAGGTGCACGTCAAACACAGCCACCTGGG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGATAAACTCAGCCTTCTaGCGTGAGCCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTINSAF*REPSSS
Trigger: CGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTAT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALLLWVT*CSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKLLWVT*CSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALFTRSC*LRNSLR
Trigger: CCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTAAACACACGGGGCATTaGAAGGTGCCGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIKHTGH*KVPPMP
Trigger: GGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTT...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAAACACACGGGGCATTaGAAGGTGCCGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAKHTGH*KVPPMP
Trigger: GGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAAGCGGATGAAGGACTaGTCGCAGAACTGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLKRMKD*SQNWQG
Trigger: CCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCACTTGAACGGCAGCTaGTCGCTGTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHLNGS*SLWICS
Trigger: CGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVHLKG*LELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVHLKG*LELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVCSLFF*WACMWL
Trigger: GAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGCTCCTGCAGGCTATaGATGTCGGCGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKCSCRL*MSANIS
Trigger: CGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTACAAGGATACTCCCCATaGGAGATGGAGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVQGYSP*EMELAL
Trigger: AAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTG...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAACCGAGGAAAATTGCTaGTCGCAGCTCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVTEENC*SQLSHT
Trigger: TGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TTGGACAAGATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCG +
Preference number: 5 (lower is better)
Translates to: LDKILNFSGIVLSHLELKLSWWP*GVPHWP
Trigger: CGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG...TTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAATCTTGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAAAGGTGCCATGGATCTaGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVKVPWI*SSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIFTRSC*LRNSLR
Trigger: CCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTCGGCACTCTCAAACTaGACACTGCACTCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALSALSN*TLHSGQ
Trigger: TTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTSLHSW*MPSSIM
Trigger: CATGATTGAGGAAGGCATCAACCACGAGTGTAAGCT...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCACGCTCATTTCTCTCCTCTaGACTTGTCACGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: WVANDTLIGCNVQMALPTLISLL*TCHAVP
Trigger: AGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAG...CGTGGGGAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKCSLFF*WACMWL
Trigger: GAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALCSLFF*WACMWL
Trigger: GAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLLARCS*FFLWAC
Trigger: GCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAATGAAGTCGTCCTTCTaGGCTTCCTTCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVMKSSF*ASFSDL
Trigger: CAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCAT...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLHLCFW*AWAWWI
Trigger: TATCCACCAAGCCCACGCCAACCAGAAACACAAGTG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAACACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKHLCFW*AWAWWI
Trigger: TATCCACCAAGCCCACGCCAACCAGAAACACAAGTG...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGTTCTTGTGCAGCTaGCGAACGTGCTCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWFLCS*RTCSLR
Trigger: CCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAAAGGTGCCATGGATCTaGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLKVPWI*SSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVVGNVD*DLSLVL
Trigger: GAGAACGAGAGAGAGATCCAAATCCACGTTGCCAAC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATTCCTCAATCATGTGGTaGGCAACGTGGATTTGGATC +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNSSIMW*ATWIWI
Trigger: GATCCAAATCCACGTTGCCAACCACATGATTGAGGA...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGAGTCGAACATCTGGTaGCACAGCTTACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKESNIW*HSLHSW
Trigger: CCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAATGTGCTGCTGCAACTaGTTGGCCTGGACGAAGACT +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLMCCCN*LAWTKT
Trigger: AGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACAT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAATGTGCTGCTGCAACTaGTTGGCCTGGACGAAGACT +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKMCCCN*LAWTKT
Trigger: AGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACAT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGGGAAGGGCTACCCACTaGCCTGCCTGTATCCAACAA +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRGRATH*PACIQQ
Trigger: TTGTTGGATACAGGCAGGCAAGTGGGTAGCCCTTCC...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGCATTTACTGGCATGCTaGCCTGTGCCACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRHLLAC*PVPLWP
Trigger: AGGCCACAGTGGCACAGGCAAGCATGCCAGTAAATG...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIACSLFF*WACMWL
Trigger: GAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAILARCS*FFLWAC
Trigger: GCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAATGAAGTCGTCCTTCTaGGCTTCCTTCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKMKSSF*ASFSDL
Trigger: CAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCAT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAATGAAGTCGTCCTTCTaGGCTTCCTTCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLMKSSF*ASFSDL
Trigger: CAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCAT...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTCACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIHLCFW*AWAWWI
Trigger: TATCCACCAAGCCCACGCCAACCAGAAACACAAGTG...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGCACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRHLCFW*AWAWWI
Trigger: TATCCACCAAGCCCACGCCAACCAGAAACACAAGTG...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCC +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALELEVA*IARILP
Trigger: GGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTC...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLELEVA*IARILP
Trigger: GGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKELEVA*IARILP
Trigger: GGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAACCGAGGAAAATTGCTaGTCGCAGCTCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIATEENC*SQLSHT
Trigger: TGTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTACATCTTCTTCTCATaGCTGTGCTTCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALYIFFS*LCFTAR
Trigger: CCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATACATCTTCTTCTCATaGCTGTGCTTCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKYIFFS*LCFTAR
Trigger: CCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAAGGTGCCATGGATCTaGAGCTCAAGCGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAKVPWI*SSSVEV
Trigger: CACTTCCACGCTTGAGCTCAAGATCCATGGCACCTT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKVGNVD*DLSLVL
Trigger: GAGAACGAGAGAGAGATCCAAATCCACGTTGCCAAC...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTAGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLVGNVD*DLSLVL
Trigger: GAGAACGAGAGAGAGATCCAAATCCACGTTGCCAAC...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGAGTCGAACATCTGGTaGCACAGCTTACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIESNIW*HSLHSW
Trigger: CCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGATGTGCTGCTGCAACTaGTTGGCCTGGACGAAGACT +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRMCCCN*LAWTKT
Trigger: AGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACAT...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAATCTGTGTGCAGCCCTTaGTCAGGCATCACTTCATAC +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSVCSP*SGITSY
Trigger: GTATGAAGTGATGCCTGACAAAGGGCTGCACACAGA...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCTTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALFSLMC*VSFRME
Trigger: CTCCATCCTGAAACTCACCAAGCACATCAAGGAGAA...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAELEVA*IARILP
Trigger: GGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTACATCTTCTTCTCATaGCTGTGCTTCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIYIFFS*LCFTAR
Trigger: CCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIVGNVD*DLSLVL
Trigger: GAGAACGAGAGAGAGATCCAAATCCACGTTGCCAAC...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACATCTGGGTTGCAAAAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: IIAAPHGQIIRVLHLGCKSLHSW*MPSSIM
Trigger: CATGATTGAGGAAGGCATCAACCACGAGTGTAAGCT...TTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTATTCTCTCCTCTTGACTaGTCACGCTGTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLFSPLD*SRCSCL
Trigger: AAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAA...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp GTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACGCCACCAACCGTCAAATGATCGCAGGTGTAAATaGATTCATCCTCCATGTCTT +
Preference number: 5 (lower is better)
Translates to: VFLMGAVTNLALRHQPSNDRRCK*IHPPCL
Trigger: AAGACATGGAGGATGAATCAATTTACACCTGCGATC...ATTTGACGGTTGGTGGCGTAGGGCTAAATTAGTCACTGCCCCCATTAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAGTCACCAGAAGCCCCTaGATATGGGAGTCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAVTRSP*IWESSR
Trigger: TCTAGAAGACTCCCATATCAAGGGGCTTCTGGTGAC...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCTGAACTTCTCTGGGATTGTTTTAAGCCACCTAGAATTGAAACTCCATAGGTCTGTGTGCAGCCCTTaGTCAGGCATCACTTCATAC +
Preference number: 5 (lower is better)
Translates to: ILNFSGIVLSHLELKLHRSVCSP*SGITSY
Trigger: GTATGAAGTGATGCCTGACAAAGGGCTGCACACAGA...CCTATGGAGTTTCAATTCTAGGTGGCTTAAAACAATCCCAGAGAAGTTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGCCTGGCACCATCATaGATGACCATGCTGCTTACA +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAICLAPS*MTMLLT
Trigger: TGTAAGCAGCATGGTCATCAATGATGGTGCCAGGCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561648.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CATTTCCAGCTGCTTATAATAGCAGCGCCTCATGGCCAAATCATTAGAGTTTTACCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: HFQLLIIAAPHGQIIRVLPMEHW*QKKALL
Trigger: TAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGG...TAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGCAGCTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCCCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALPMEHW*QKKALL
Trigger: TAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGG...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAFSLMC*VSFRME
Trigger: CTCCATCCTGAAACTCACCAAGCACATCAAGGAGAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATGGAAGCTCTCAAAGTaGGAGAACTTGAGGTCGCAT +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAWKLSK*ENLRSH
Trigger: ATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp CAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAATTTGGAAGCTCTCAAAGTaGGAGAACTTGAGGTCGCAT +
Preference number: 5 (lower is better)
Translates to: QTIAKQSHHDAQLPRIAIWKLSK*ENLRSH
Trigger: ATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA...AATTGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TACATCTGGGTTGCAAATGACACTTTGATTGGATGTAATGTTCAAATGGCCCTCAAGGTCATCTGGCACTaGATGCACTGGTATGTCTTT +
Preference number: 5 (lower is better)
Translates to: YIWVANDTLIGCNVQMALKVIWH*MHWYVF
Trigger: AAAGACATACCAGTGCATCAAGTGCCAGATGACCTT...GAGGGCCATTTGAACATTACATCCAATCAAAGTGTCATTTGCAACCCAGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATCCTCAATCATGTGGTaGGCAACGTGGATTTGGATC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASSIMW*ATWIWI
Trigger: GATCCAAATCCACGTTGCCAACCACATGATTGAGGA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIASLHSW*MPSSIM
Trigger: CATGATTGAGGAAGGCATCAACCACGAGTGTAAGCT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp TCTAACTCTAGAAATGTAGTCTGCGGCGGAAAGTCTAAAAGCACACTAGCTGTAGATCGCAGGTGTAAATaGATTCATCCTCCATGTCTT +
Preference number: 5 (lower is better)
Translates to: SNSRNVVCGGKSKSTLAVDRRCK*IHPPCL
Trigger: AAGACATGGAGGATGAATCAATTTACACCTGCGATC...TACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCTAGAGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCATTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAFLWFS*MCLVSF
Trigger: GAAACTCACCAAGCACATCAAGGAGAACCACAAGAA...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS-3UTR CAA 90 bp ATTCAGACAATAGCCAAGCAATCACATCACGATGCACAATTACCTAGAATTGCAAAGGTCATCTGGCACTaGATGCACTGGTATGTCTTT +
Preference number: 5 (lower is better)
Translates to: IQTIAKQSHHDAQLPRIAKVIWH*MHWYVF
Trigger: AAAGACATACCAGTGCATCAAGTGCCAGATGACCTT...TGCAATTCTAGGTAATTGTGCATCGTGATGTGATTGCTTGGCTATTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
CDS CCA 72 bp TCTGCCCCCGCAGCGGCTTCAAGGTGGAGTCCGGGGTaGAGCCACGCTCCACAGAGGCGCTGGAGTCGGGTG +
Preference number: 6 (lower is better)
Translates to: SAPAAASRWSPG*SHAPQRRWSRV
Trigger: CACCCGACTCCAGCGCCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGCGGGGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CACGCTCCACAGAGGCGCTGGAGTCGGGTGTGGCGCTaGTCATGGAGGCCACGCTGCCCAGTACAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: HAPQRRWSRVWR*SWRPRCPVQGR
Trigger: CCGACCCTGTACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GCGCGTCCCCCGCAGCTCCTGAACCGGCTGAGACTCTaGTCTCCGGGCAGGCCCGGGAAGGGTTCTGACTTG +
Preference number: 6 (lower is better)
Translates to: ARPPQLLNRLRL*SPGRPGKGSDL
Trigger: CAAGTCAGAACCCTTCCCGGGCCTGCCCGGAGACCAGAGTCTCAGCCGGTTCAGGAGCTGCGGGGGACGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562520.1
CDS TCA 72 bp CTTCTGCAGCCCCTGGCCATTGGGGGAGGACGCCGCTaGGCTGCCCGCCAGCTTCTGCATGTGGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: LLQPLAIGGGRR*AARQLLHVEGA
Trigger: GGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CCTGCTCACCAGGGCGTCCCAGGGCAAACTGGCCGATaGCAAGAGGGCCAGAACCTGAGCCCGGGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: PAHQGVPGQTGR*QEGQNLSPGSQ
Trigger: CTGGGAACCCGGGCTCAGGTTCTGGCCCTCTTGGCATCGGCCAGTTTGCCCTGGGACGCCCTGGTGAGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS GCA 72 bp TCCCCCTCTTCAACTTTCACCGAGCGCGGCTTCGCCTaGTTCCGCCTGGACATGTCCGGGGCTCCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: SPSSTFTERGFA*FRLDMSGAPGA
Trigger: AGCGCCCGGAGCCCCGGACATGTCCAGGCGGAAGCAGGCGAAGCCGCGCTCGGTGAAAGTTGAAGAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS CCA 72 bp CTTTCCCCCTGCTCACCAGGGCGTCCCAGGGCAAACTaGCCGATGCCAAGAGGGCCAGAACCTGAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: LSPCSPGRPRAN*PMPRGPEPEPG
Trigger: CCCGGGCTCAGGTTCTGGCCCTCTTGGCATCGGCCAGTTTGCCCTGGGACGCCCTGGTGAGCAGGGGGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535559.5
CDS CCA 72 bp GCCACGCTGCCCAGTACAGGGTCGGGACTGACACTGTaGTTGCTGGAGTCGGGCTGCCGGTGGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: ATLPSTGSGLTL*LLESGCRWLSR
Trigger: CCTGGACAGCCACCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TGGAGCCACGCTCCACAGAGGCGCTGGAGTCGGGTGTaGCGCTGCTCATGGAGGCCACGCTGCCCAGTACAG +
Preference number: 6 (lower is better)
Translates to: WSHAPQRRWSRV*RCSWRPRCPVQ
Trigger: CTGTACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGCGTGGCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GGGCGCACTTGTAGAGCTTCTGCAGCCCCTGGCCATTaGGGGAGGACGCCGCTGAGCTGCCCGCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GRTCRASAAPGH*GRTPLSCPPAS
Trigger: AGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCTCTACAAGTGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TCATGGAGGCCACGCTGCCCAGTACAGGGTCGGGACTaGCACTGTGGTTGCTGGAGTCGGGCTGCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: SWRPRCPVQGRD*HCGCWSRAAGG
Trigger: GCCACCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TCTGGGTGCCTTTCCGGGGCCCACTGGTCTCCGGCGTaGGGTCACGGTGGTCCACCTGCATGTGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SGCLSGAHWSPA*GHGGPPACGSP
Trigger: TGGAGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGGCACCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp TTGGTCCAGCCCTGCCCGTCATCCCGCATCTTCTTCTaGCCCCGCAGCGGCTTCAAGGTGGAGTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: LVQPCPSSRIFF*PRSGFKVESGV
Trigger: CACCCCGGACTCCACCTTGAAGCCGCTGCGGGGGCAGAAGAAGATGCGGGATGACGGGCAGGGCTGGACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp ACGCTGCCCAGTACAGGGTCGGGACTGACACTGTGGTaGCTGGAGTCGGGCTGCCGGTGGCTGTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: TLPSTGSGLTLW*LESGCRWLSRW
Trigger: CCACCTGGACAGCCACCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp CCATGCAGCCGGCGCAGAGGCCGTAGGGCAGCCCATTaGCGTCAAGCTTCACCAGGTCCTGCTTGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: PCSRRRGRRAAH*RQASPGPACCG
Trigger: TCCGCAGCAAGCAGGACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACGGCCTCTGCGCCGGCTGCATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GCGTTGGGGCCGCAGTGGGAGACGCGGATGTGCTCCTaGAGGCTATTGATGTCGGCGAACATCTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: ALGPQWETRMCS*RLLMSANISGQ
Trigger: CTGCCCCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GCGTGGGCTGCACCACCGGAGACTCTAGTTTGGCACTaGCCACACTGCAGTGGGCCTGCTGGATGTGCTCGG +
Preference number: 6 (lower is better)
Translates to: AWAAPPETLVWH*PHCSGPAGCAR
Trigger: CCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GGGTTGGCGTTGGGGCCGCAGTGGGAGACGCGGATGTaGTCCTGCAGGCTATTGATGTCGGCGAACATCTCG +
Preference number: 6 (lower is better)
Translates to: GLALGPQWETRM*SCRLLMSANIS
Trigger: CGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp TCCAGGACAGCGGTGGGCCCGGTGGTCCGTCAGGTCTaGCAGAGACTCGAAGTCCTGCTGACAGTGATCGCA +
Preference number: 6 (lower is better)
Translates to: SRTAVGPVVRQV*QRLEVLLTVIA
Trigger: TGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000568094.2
CDS CCA 72 bp CCGCTTCGGGGAAGACACCTCCACATCGGACGAGACTaGGCTCTGCTCGGCCTTGGACTTCTTGCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: PLRGRHLHIGRD*ALLGLGLLAVG
Trigger: GCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCCCGAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CTGCAGGTCAGCAGGCTCAGCTTTCTTGGTGGCCATTaGGGGTACCCCATTGGCCGTGCCGTTCTCGGTCGC +
Preference number: 6 (lower is better)
Translates to: LQVSRLSFLGGH*GYPIGRAVLGR
Trigger: GCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GCAGCATGCCCTGCAGGTCAGCAGGCTCAGCTTTCTTaGTGGCCATTGGGGGTACCCCATTGGCCGTGCCGT +
Preference number: 6 (lower is better)
Translates to: AACPAGQQAQLS*WPLGVPHWPCR
Trigger: ACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TCGTCATCACCATCTCCAGGACAGCGGTGGGCCCGGTaGTCCGTCAGGTCTGCCAGAGACTCGAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSSPSPGQRWAR*SVRSARDSKSC
Trigger: GCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATGGTGATGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
CDS CCA 72 bp TCCTGGGGCTGTTTTGCATTACCTCCAGGACAGCGGTaGGCCCGGTGGTCCGTCAGGTCTGCCAGAGACTCG +
Preference number: 6 (lower is better)
Translates to: SWGCFALPPGQR*ARWSVRSARDS
Trigger: CGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CAA 72 bp CCTGCAGGTCAGCAGGCTCAGCTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCGTGCCGTTCTCGGTCG +
Preference number: 6 (lower is better)
Translates to: PAGQQAQLSWWP*GVPHWPCRSRS
Trigger: CGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp GCCTGCATGTGGCTCTGCAGCGAGCTGGTGGAGGAGAAGCCGCGCTaGCACACAGTGCACTTGAAGGGCTTGCTGGAGCTGTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: ACMWLCSELVEEKPR*HTVHLKGLLELWVF
Trigger: GAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp ACCTCCATGAAGGACTGCGTGGGCTGCACCACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAGTGGGCCTGCTGGATGTGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: TSMKDCVGCTTGDSS*ALPTLQWACWMCSV
Trigger: CACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp GCAGCATGCCCTGCAGGTCAGCAGGCTCAGCTTTCTTGGTGGCCATaGGGGGTACCCCATTGGCCGTGCCGTTCTCGGTCGCAGCATCAA +
Preference number: 6 (lower is better)
Translates to: AACPAGQQAQLSWWP*GVPHWPCRSRSQHQ
Trigger: TTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp CAGATGCGACAGGTGCCCGTGTCCAGGCTCTTGCTGTGGGTCACCTaGTGTTCGGTGAGCGTCAGCAGCGAAGGGAAGCGCTCACCACAG +
Preference number: 6 (lower is better)
Translates to: QMRQVPVSRLLLWVT*CSVSVSSEGKRSPQ
Trigger: CTGTGGTGAGCGCTTCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp AGGGCTTGCTGGAGCTGTGGGTCTTCAGGTGGATCTTaGGGTGGTCGCTGCGGGAGAAGGCTGCCTCGCACT +
Preference number: 6 (lower is better)
Translates to: RACWSCGSSGGS*GGRCGRRLPRT
Trigger: AGTGCGAGGCAGCCTTCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TGCTGTCACGGAGGAATCCCAGGCCAGCGAGAAGTCTaGGGCCTCCCCCTCTTCAACTTTCACCGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: CCHGGIPGQREV*GLPLFNFHRAR
Trigger: CCGCGCTCGGTGAAAGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563137.7
CDS GCA 72 bp GGGGAAGACACCTCCACATCGGACGAGACTGGGCTCTaGTCGGCCTTGGACTTCTTGCTGTGGGCCAGTGGA +
Preference number: 6 (lower is better)
Translates to: GEDTSTSDETGL*SALDFLLWASG
Trigger: TCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CCATTGGAGATGGAGTTGGCGCTTGCTGAGAGCCGCTaGCGCTTCGGGGAAGACACCTCCACATCGGACGAG +
Preference number: 6 (lower is better)
Translates to: PLEMELALAESR*RFGEDTSTSDE
Trigger: CTCGTCCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GCTGCAGGAGGGACTCCTGGGAGTCAAAGTCCTCTTTaGACTGGGGGCACGCTTGCTTCCGCAGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: AAGGTPGSQSPL*TGGTLASAAAA
Trigger: AGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTCCCAGGAGTCCCTCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CTCTGCTGGGGCTTGTCCGCGTGGATGGTCTTCAGGTaGATCTCCAGCACGGCCAGGCTGTTAAAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LCWGLSAWMVFR*ISSTARLLKSR
Trigger: GCGGGACTTTAACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATCCACGCGGACAAGCCCCAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GACATGTGTGGCTCTGCTGGGGCTTGTCCGCGTGGATaGTCTTCAGGTGGATCTCCAGCACGGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: DMCGSAGACPRG*SSGGSPARPGC
Trigger: ACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCACACATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp AGGACTGCGTGGGCTGCACCACCGGAGACTCTAGTTTaGCACTGCCCACACTGCAGTGGGCCTGCTGGATGT +
Preference number: 6 (lower is better)
Translates to: RTAWAAPPETLV*HCPHCSGPAGC
Trigger: ACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GCATGCCCTGCAGGTCAGCAGGCTCAGCTTTCTTGGTaGCCATTGGGGGTACCCCATTGGCCGTGCCGTTCT +
Preference number: 6 (lower is better)
Translates to: ACPAGQQAQLSW*PLGVPHWPCRS
Trigger: AGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp AAGGACTGCGTGGGCTGCACCACCGGAGACTCTAGTTaGGCACTGCCCACACTGCAGTGGGCCTGCTGGATG +
Preference number: 6 (lower is better)
Translates to: KDCVGCTTGDSS*ALPTLQWACWM
Trigger: CATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp GGGTTCTTAAGCAGCATGCCCTGCAGGTCAGCAGGCTCAGCTTTCTaGGTGGCCATTGGGGGTACCCCATTGGCCGTGCCGTTCTCGGTC +
Preference number: 6 (lower is better)
Translates to: GFLSSMPCRSAGSAF*VAIGGTPLAVPFSV
Trigger: GACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTAAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp GCCGAGGTCACAACCATCTCCGATCATCTGCGTGGGTaGCGCAACATCCTTGCTGGAGGGAGACGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: AEVTTISDHLRG*RNILAGGRRGH
Trigger: GTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp AGGATACTCCCCATTGGAGATGGAGTTGGCGCTTGCTaGGAGCCGCTGCCGCTTCGGGGAAGACACCTCCAC +
Preference number: 6 (lower is better)
Translates to: RILPIGDGVGAC*EPLPLRGRHLH
Trigger: GTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TGCTGTCACGGAGGAATCCCAGGCCAGCGAGAAGTCTaGGGCCTCCCCCTCTTCAACCCTGAGACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: CCHGGIPGQREV*GLPLFNPETLQ
Trigger: CTGCAAGGTCTCAGGGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562520.1
CDS GCA 72 bp TCGCCGAGGCCGAGGTCACAACCATCTCCGATCATCTaGGTGGGTGACGCAACATCCTTGCTGGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SPRPRSQPSPII*VGDATSLLEGD
Trigger: GTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CTGCGGAGAGGTGTCCTGTTGAGCGATCCCTCACTGTaGGTGCTGGCTCATCGTGTGGTTCTGCAGCTCGGT +
Preference number: 6 (lower is better)
Translates to: LRRGVLLSDPSL*VLAHRVVLQLG
Trigger: ACCGAGCTGCAGAACCACACGATGAGCCAGCACGCACAGTGAGGGATCGCTCAACAGGACACCTCTCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CTCCGATCATCTGCGTGGGTGACGCAACATCCTTGCTaGAGGGAGACGAGGCCACCCAGGAGAGTTGTGGGT +
Preference number: 6 (lower is better)
Translates to: LRSSAWVTQHPC*RETRPPRRVVG
Trigger: ACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CGAGGCCGAGGTCACAACCATCTCCGATCATCTGCGTaGGTGACGCAACATCCTTGCTGGAGGGAGACGAGG +
Preference number: 6 (lower is better)
Translates to: RGRGHNHLRSSA*VTQHPCWRETR
Trigger: CCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp ACCGGAGACTCTAGTTTGGCACTGCCCACACTGCAGTaGGCCTGCTGGATGTGCTCGGTGAGGGAGGACTCA +
Preference number: 6 (lower is better)
Translates to: TGDSSLALPTLQ*ACWMCSVREDS
Trigger: TGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GGCTCCGACGCGTCCACGTCATCCTCGCTGGCCTCATaGCTGTTAGGTGCCTCAGGGTTCTTAAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: GSDASTSSSLAS*LLGASGFLSSM
Trigger: CATGCTGCTTAAGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGTGGACGCGTCGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CAGATGCGACAGGTGCCCGTGTCCAGGCTCTTGCTGTaGGTCACCTTGTGTTCGGTGAGCGTCAGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: QMRQVPVSRLLL*VTLCSVSVSSE
Trigger: TTCGCTGCTGACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GAGGACGCCGCTGAGCTGCCCGCCAGCTTCTGCATGTaGAAGGTGCCATGGATCTTGAGCTCAAGCGTGGAA +
Preference number: 6 (lower is better)
Translates to: EDAAELPASFCM*KVPWILSSSVE
Trigger: TTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TGTTTTGCATTACCTCCAGGACAGCGGTGGGCCCGGTaGTCCGTCAGGTCTGCCAGAGACTCGAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: CFALPPGQRWAR*SVRSARDSKSC
Trigger: GCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CAA 72 bp GGCAGCCCATTGACGTCAAGCTTCACCAGGTCCTGCTaGCTGCGGAACTCCTTGAGGCACAGGGCGCACTTG +
Preference number: 6 (lower is better)
Translates to: GSPLTSSFTRSC*LRNSLRHRAHL
Trigger: CAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCTTGACGTCAATGGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp ACCCGTGTAACCACCTGTCAGAGTCCTGGGGCTGTTTaGCATTACCTCCAGGACAGCGGTGGGCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: TRVTTCQSPGAV*HYLQDSGGPGG
Trigger: ACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGACTCTGACAGGTGGTTACACGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CAA 90 bp TGCAGCGAGCTGGTGGAGGAGAAGCCGCGCTTGCACACAGTGCACTaGAAGGGCTTGCTGGAGCTGTGGGTCTTCAGGTGGATCTTGAGG +
Preference number: 6 (lower is better)
Translates to: CSELVEEKPRLHTVH*KGLLELWVFRWILR
Trigger: CCTCAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TGGTGGAGGAGAAGCCGCGCTTGCACACAGTGCACTTaGAGGGCTTGCTGGAGCTGTGGGTCTTCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: WWRRSRACTQCT*RACWSCGSSGG
Trigger: TCCACCTGAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp AGCAGTGTGTTCTCGTCGACGAAGACCTCAGGGCAGTaGATGCACTGCAGGTCCGCCTTCTCGGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSVFSSTKTSGQ*MHCRSAFSDSC
Trigger: GCAGCTGTCCGAGAAGGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCTTCGTCGACGAGAACACACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp CGCAGTGGGAGACGCGGATGTGCTCCTGCAGGCTATTaGTGTCGGCGAACATCTCGGGGCAGTAGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: RSGRRGCAPAGY*CRRTSRGSSCS
Trigger: ACTGCAACTACTGCCCCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp GGGAGTTGGTGCAGTAGGGGCAGGAATAGACCTCCATaGAGGACTGCGTGGGCTGCACCACCGGAGACTCTA +
Preference number: 6 (lower is better)
Translates to: GSWCSRGRNRPP*RTAWAAPPETL
Trigger: TAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCTGCCCCTACTGCACCAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TGTCCAGGCTCTTGCTGTGGGTCACCTTGTGTTCGGTaGGCGTCAGCAGCGAAGGGAAGCGCTCACCACAGA +
Preference number: 6 (lower is better)
Translates to: CPGSCCGSPCVR*ASAAKGSAHHR
Trigger: TCTGTGGTGAGCGCTTCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp CAAGCTTCACCAGGTCCTGCTTGCTGCGGAACTCCTTaGGGCACAGGGCGCACTTGTAGAGCTTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: QASPGPACCGTP*GTGRTCRASAA
Trigger: GGCTGCAGAAGCTCTACAAGTGCGCCCTGTGCCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp TGCTCCTTGTTCTTTTTGTGGGCCTGCATGTGGCTCTaGAGCGAGCTGGTGGAGGAGAAGCCGCGCTTGCAC +
Preference number: 6 (lower is better)
Translates to: CSLFFLWACMWL*SELVEEKPRLH
Trigger: GTGCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GACTCTAGTTTGGCACTGCCCACACTGCAGTGGGCCTaGTGGATGTGCTCGGTGAGGGAGGACTCAGTAAGG +
Preference number: 6 (lower is better)
Translates to: DSSLALPTLQWA*WMCSVREDSVR
Trigger: CCTTACTGAGTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GCCGTGCCGTTCTCGGTCGCAGCATCAAACACACAGTaGTTCTCCCGCAGGTGCTTCTCCAGCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: AVPFSVAASNTQ*FSRRCFSSRMM
Trigger: CATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GTCCACGTCATCCTCGCTGGCCTCATGGCTGTTAGGTaGCTCAGGGTTCTTAAGCAGCATGCCCTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: VHVILAGLMAVR*LRVLKQHALQV
Trigger: GACCTGCAGGGCATGCTGCTTAAGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CAGCGGAAGCCCGTGAGTGAGTTGCGCAGGTCAGGGTaGATCTGGCAGTGCTCAATAAACTCCTCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: QRKPVSELRRSG*IWQCSINSSSL
Trigger: GAGCGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCCTGACCTGCGCAACTCACTCACGGGCTTCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TTATTACCGTCAGAGGGGTTGGCGTTGGGGCCGCAGTaGGAGACGCGGATGTGCTCCTGCAGGCTATTGATG +
Preference number: 6 (lower is better)
Translates to: LLPSEGLALGPQ*ETRMCSCRLLM
Trigger: CATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TGTGCTTCACCGCCAGGTGCACCTGGATGGACACCTTaGAGTCGAAGACCTCCTGACACAGGGTGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: CASPPGAPGWTP*SRRPPDTGCSG
Trigger: ACCACTGCACCCTGTGTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GCTCAGCTTTCTTGGTGGCCATTGGGGGTACCCCATTaGCCGTGCCGTTCTCGGTCGCAGCATCAAACACAC +
Preference number: 6 (lower is better)
Translates to: AQLSWWPLGVPH*PCRSRSQHQTH
Trigger: GTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GTCTCCGGCGTGAGGTCACGGTGGTCCACCTGCATGTaGCTCTCCAGGTCTTCGGCACTCTCAAACTTGACA +
Preference number: 6 (lower is better)
Translates to: VSGVRSRWSTCM*LSRSSALSNLT
Trigger: TGTCAAGTTTGAGAGTGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GGCTCAGCTTTCTTGGTGGCCATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTCGCAGCATCAAACACA +
Preference number: 6 (lower is better)
Translates to: GSAFLVAIGGTP*AVPFSVAASNT
Trigger: TGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp ATCTTGCAGATGCGACAGGTGCCCGTGTCCAGGCTCTaGCTGTGGGTCACCTTGTGTTCGGTGAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: ILQMRQVPVSRL*LWVTLCSVSVS
Trigger: GCTGACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp CTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAGTGTGTTCTCGTCGACGAAGACCTC +
Preference number: 6 (lower is better)
Translates to: LLRAHGALVFLVGVG*VDMGEQCVLVDEDL
Trigger: GAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp ATGGAGCACTGGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGGTaGGCGTTGGGGCCGCAGTGGGAGACGCGGATGTGCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: MEHWLQKKALLPSEG*ALGPQWETRMCSCR
Trigger: CCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp GGGGAAGACACCTCCACATCGGACGAGACTGGGCTCTGCTCGGCCTaGGACTTCTTGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: GEDTSTSDETGLCSA*DFLLWASGMFLWFS
Trigger: GGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp CGCATTGATTGCAAGGATACTCCCCATTGGAGATGGAGTTGGCGCTaGCTGAGAGCCGCTGCCGCTTCGGGGAAGACACCTCCACATCGG +
Preference number: 6 (lower is better)
Translates to: RIDCKDTPHWRWSWR*LRAAAASGKTPPHR
Trigger: CCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp AGGTCAGCAGGCTCAGCTTTCTTGGTGGCCATTGGGGGTACCCCATaGGCCGTGCCGTTCTCGGTCGCAGCATCAAACACACAGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RSAGSAFLVAIGGTP*AVPFSVAASNTQCF
Trigger: GAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp ATCTGGCAGTGCTCAATAAACTCCTCCTCGCTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCCGTGTCCAGGCTCTTGCTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: IWQCSINSSSLCRGI*QMRQVPVSRLLLWV
Trigger: GACCCACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAGCGAGGAGGAGTTTATTGAGCACTGCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp TGTCCAATTACCCGTGTAACCACCTGTCAGAGTCCTGGGGCTGTTTaGCATTACCTCCAGGACAGCGGTGGGCCCGGTGGTCCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: CPITRVTTCQSPGAV*HYLQDSGGPGGPSG
Trigger: ACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGACTCTGACAGGTGGTTACACGGGTAATTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CAA 90 bp ACTGAGGAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATATGGGCGAGCAGTGTGTTCTCGTCG +
Preference number: 6 (lower is better)
Translates to: TEENCSGHMGHLCFW*AWAWWIWASSVFSS
Trigger: CGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp ACGCTGTTCCTGTCTTCCAGCGCACGGCTGGTTTTCTaGTCGCACTCTGGCTCTCCTTCTAGGCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: TLFLSSSARLVF*SHSGSPSRPPW
Trigger: CCATGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562871.5
CDS GCA 72 bp CAGGCCGTGCAGCGGTACATCTTCTTCTCATTGCTGTaGTTCACCGCCAGGTGCACCTGGATGGACACCTTG +
Preference number: 6 (lower is better)
Translates to: QAVQRYIFFSLL*FTARCTWMDTL
Trigger: CAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTACCGCTGCACGGCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CTTTCTTGGTGGCCATTGGGGGTACCCCATTGGCCGTaGCGTTCTCGGTCGCAGCATCAAACACACAGTGCT +
Preference number: 6 (lower is better)
Translates to: LSWWPLGVPHWP*RSRSQHQTHSA
Trigger: AGCACTGTGTGTTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp GCAGTTGTCAGAAGAAATAAACCAGCTGCTACTTTCTaGGAGGTTTTACCCAGCCGCCAGGGGGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: AVVRRNKPAATF*EVLPSRQGAPR
Trigger: GCGCGGCGCCCCCTGGCGGCTGGGTAAAACCTCGCAGAAAGTAGCAGCTGGTTTATTTCTTCTGACAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562520.1
CDS CCA 72 bp CACATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTTaGTGGATATGGGCGAGCAGTGTGTTCTCGTCGACG +
Preference number: 6 (lower is better)
Translates to: HMGHLCFWLAWA*WIWASSVFSST
Trigger: CGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TCAGGGCACATGGGGCACTTGTGTTTCTGGTTGGCGTaGGCTTGGTGGATATGGGCGAGCAGTGTGTTCTCG +
Preference number: 6 (lower is better)
Translates to: SGHMGHLCFWLA*AWWIWASSVFS
Trigger: CGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp ACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTTaGCGTGGGCTTGGTGGATATGGGCGAGCAGTGTGT +
Preference number: 6 (lower is better)
Translates to: TAQGTWGTCVSG*RGLGGYGRAVC
Trigger: ACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GAGAACTGCTCAGGGCACATGGGGCACTTGTGTTTCTaGTTGGCGTGGGCTTGGTGGATATGGGCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: ENCSGHMGHLCF*LAWAWWIWASS
Trigger: ACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp AGAAGAAAGCATTATTACCGTCAGAGGGGTTGGCGTTaGGGCCGCAGTGGGAGACGCGGATGTGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: RRKHYYRQRGWR*GRSGRRGCAPA
Trigger: TGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGGTTaGCGTTGGGGCCGCAGTGGGAGACGCGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: GCRRKHYYRQRG*RWGRSGRRGCA
Trigger: AGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GGTCGCATTGATTGCAAGGATACTCCCCATTGGAGATaGAGTTGGCGCTTGCTGAGAGCCGCTGCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: GRIDCKDTPHWR*SWRLLRAAAAS
Trigger: CGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GCTTGTCGCAGCTCTCGCACACATAGTGGGTCGACGTaGTCATGTAATGCACTGTCAGGTGCTGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: ACRSSRTHSGST*SCNALSGAAGG
Trigger: CCCTCCTGCAGCACCTGACAGTGCATTACATGACCACGTCGACCCACTATGTGTGCGAGAGCTGCGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GAGAAGCCGCGCTTGCACACAGTGCACTTGAAGGGCTaGCTGGAGCTGTGGGTCTTCAGGTGGATCTTGAGG +
Preference number: 6 (lower is better)
Translates to: EKPRLHTVHLKG*LELWVFRWILR
Trigger: CCTCAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GCACATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTaGGTGGATATGGGCGAGCAGTGTGTTCTCGTCGAC +
Preference number: 6 (lower is better)
Translates to: AHGALVFLVGVG*VDMGEQCVLVD
Trigger: GTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp AACTGCTCAGGGCACATGGGGCACTTGTGTTTCTGGTaGGCGTGGGCTTGGTGGATATGGGCGAGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: NCSGHMGHLCFW*AWAWWIWASSV
Trigger: CACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp TGGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGGTaGGCGTTGGGGCCGCAGTGGGAGACGCGGATGTGC +
Preference number: 6 (lower is better)
Translates to: WLQKKALLPSEG*ALGPQWETRMC
Trigger: GCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp TGCTCAATAAACTCCTCCTCGCTCTGCAGGGGCATCTaGCAGATGCGACAGGTGCCCGTGTCCAGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: CSINSSSLCRGI*QMRQVPVSRLL
Trigger: CAAGAGCCTGGACACGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAGCGAGGAGGAGTTTATTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp ACCTCCACATCGGACGAGACTGGGCTCTGCTCGGCCTTGGACTTCTaGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCCTTGATGTGC +
Preference number: 6 (lower is better)
Translates to: TSTSDETGLCSALDF*LWASGMFLWFSLMC
Trigger: GCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp AGTTGCAGGCCGTGCAGCGGTACATCTTCTTCTCATTaGTGTGCTTCACCGCCAGGTGCACCTGGATGGACA +
Preference number: 6 (lower is better)
Translates to: SCRPCSGTSSSH*CASPPGAPGWT
Trigger: TGTCCATCCAGGTGCACCTGGCGGTGAAGCACAGCAATGAGAAGAAGATGTACCGCTGCACGGCCTGCAACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp CCATGGATCTTGAGCTCAAGCGTGGAAGTGACTGTCTaGATGCAGACCACACAGCGGAAGCCCGTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: PWILSSSVEVTV*MQTTQRKPVSE
Trigger: CTCACTCACGGGCTTCCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGCTCAAGATCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp ATGGGGCACTTGTGTTTCTGGTTGGCGTGGGCTTGGTaGATATGGGCGAGCAGTGTGTTCTCGTCGACGAAG +
Preference number: 6 (lower is better)
Translates to: MGHLCFWLAWAW*IWASSVFSSTK
Trigger: CTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp ATTGATTGCAAGGATACTCCCCATTGGAGATGGAGTTaGCGCTTGCTGAGAGCCGCTGCCGCTTCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: IDCKDTPHWRWS*RLLRAAAASGK
Trigger: CTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GACTTGTCACGCTGTTCCTGTCTTCCAGCGCACGGCTaGTTTTCTGATCGCACTCTGGCTCTCCTTCTAGGC +
Preference number: 6 (lower is better)
Translates to: DLSRCSCLPAHG*FSDRTLALLLG
Trigger: GCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000568094.2
CDS CAA 72 bp TCCTTCTCCGACTTGGCCAGATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTCTGCAGCGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SFSDLARCSLFF*WACMWLCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp TCCACTGAGGAGAACTGCTCAGGGCACATGGGGCACTaGTGTTTCTGGTTGGCGTGGGCTTGGTGGATATGG +
Preference number: 6 (lower is better)
Translates to: STEENCSGHMGH*CFWLAWAWWIW
Trigger: CCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp CCTGAGACCTTGCAGGAGCACCCCCTCCCCGCGCAGTaGTCAGAAGAAATAAACCAGCTGCTACTTTCTGCG +
Preference number: 6 (lower is better)
Translates to: PETLQEHPLPAQ*SEEINQLLLSA
Trigger: CGCAGAAAGTAGCAGCTGGTTTATTTCTTCTGACAACTGCGCGGGGAGGGGGTGCTCCTGCAAGGTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562520.1
CDS CAA 90 bp TTCTTGGCTTCCTTCTCCGACTTGGCCAGATGCTCCTTGTTCTTTTaGTGGGCCTGCATGTGGCTCTGCAGCGAGCTGGTGGAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: FLASFSDLARCSLFF*WACMWLCSELVEEK
Trigger: CTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAGCCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp AAGTCGTCCTTCTTGGCTTCCTTCTCCGACTTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGCATGTGGCTCTGCAGCGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: KSSFLASFSDLARCS*FFLWACMWLCSELV
Trigger: CACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAGCCAAGAAGGACGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp CTTGTGACTGCCCTTGATAAACTCAGCCTTCTTGCGTaGGCCATCATCCTCGCCCGGCCGGATATTGTGGTC +
Preference number: 6 (lower is better)
Translates to: LVTALDKLSLLA*AIILARPDIVV
Trigger: GACCACAATATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTATCAAGGGCAGTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp TTGTCCTCCTGCCCGTGCACGGCAAAGATGTGCTGCTaGAACTTGTTGGCCTGGACGAAGACTGTGAAACAC +
Preference number: 6 (lower is better)
Translates to: LSSCPCTAKMCC*NLLAWTKTVKH
Trigger: GTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp CACTTGTGTTTCTGGTTGGCGTGGGCTTGGTGGATATaGGCGAGCAGTGTGTTCTCGTCGACGAAGACCTCA +
Preference number: 6 (lower is better)
Translates to: HLCFWLAWAWWI*ASSVFSSTKTS
Trigger: TGAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp TGCTCGGTGAGGGAGGACTCAGTAAGGAAACCCATGGAGCACTGGTaGCAGAAGAAAGCATTATTACCGTCAGAGGGGTTGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CSVREDSVRKPMEHW*QKKALLPSEGLALG
Trigger: CCCCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp ATGTCCAATTACCCGTGTAACCACCTGTCAGAGTCCTaGGGCTGTTTTGCATTACCTCCAGGACAGCGGTGG +
Preference number: 6 (lower is better)
Translates to: MSNYPCNHLSES*GCFALPPGQRW
Trigger: CCACCGCTGTCCTGGAGGTAATGCAAAACAGCCCCAGGACTCTGACAGGTGGTTACACGGGTAATTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568094.2
CDS CAA 72 bp TTCTTGGCTTCCTTCTCCGACTTGGCCAGATGCTCCTaGTTCTTTTTGTGGGCCTGCATGTGGCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FLASFSDLARCS*FFLWACMWLCS
Trigger: GCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGAAGCCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS GCA 72 bp TCTCGGGGCAGTAGTTGCAGTGGAAGGCAGAGATGTTaGCAAACTGCATCACAGGGTAGGCATGGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: SRGSSCSGRQRC*QTASQGRHGSC
Trigger: ACAAGAACCATGCCTACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCCACTGCAACTACTGCCCCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GGGGAGTCGAACATCTGGTTGCACAGCTTACACTCGTaGTTGATGCCTTCCTCAATCATGTGGTTGGCAACG +
Preference number: 6 (lower is better)
Translates to: GESNIWLHSLHS*LMPSSIMWLAT
Trigger: CGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp TTGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAGCCAAAGATGGGGGAGTTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: LLWASGMFLWFSLMC*VSFRMEPKMGELVQ
Trigger: CTGCACCAACTCCCCCATCTTTGGCTCCATCCTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp CAGGTGGGTCTGGAAGCTCTCAAAGTTGGAGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCCATTGGAGATGGAGTTGGCGCTTGC +
Preference number: 6 (lower is better)
Translates to: QVGLEALKVGELEVA*IARILPIGDGVGAC
Trigger: GCAAGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAGACCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp TTCTCCCGCAGGTGCTTCTCCAGCAGGATGATGGCGTGGAAGGCCTaGCTGCAGAACTTACAGTTATACTTCTTGCTGTGTGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: FSRRCFSSRMMAWKA*LQNLQLYFLLCVVM
Trigger: CATCACCACACACAGCAAGAAGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp ACGTGGATTTGGATCTCTCTCTCGTTCTCGAAGGTCATCTGGCACTaGATGCACTGGTATGTCTTTTTCCGGGGCACTGGCGATGTCTGG +
Preference number: 6 (lower is better)
Translates to: TWIWISLSFSKVIWH*MHWYVFFRGTGDVW
Trigger: CCAGACATCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 90 bp TTGGACTTCTTGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTCAGGATGGAGCCAAAGATGGGGGAG +
Preference number: 6 (lower is better)
Translates to: LDFLLWASGMFLWFS*MCLVSFRMEPKMGE
Trigger: CTCCCCCATCTTTGGCTCCATCCTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp GTGAGGGAGGACTCAGTAAGGAAACCCATGGAGCACTaGTTGCAGAAGAAAGCATTATTACCGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: VREDSVRKPMEH*LQKKALLPSEG
Trigger: CCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTTCCTTACTGAGTCCTCCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GCCAGTGGAATGTTCTTGTGGTTCTCCTTGATGTGCTaGGTGAGTTTCAGGATGGAGCCAAAGATGGGGGAG +
Preference number: 6 (lower is better)
Translates to: ASGMFLWFSLMC*VSFRMEPKMGE
Trigger: CTCCCCCATCTTTGGCTCCATCCTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GAGTCGAACATCTGGTTGCACAGCTTACACTCGTGGTaGATGCCTTCCTCAATCATGTGGTTGGCAACGTGG +
Preference number: 6 (lower is better)
Translates to: ESNIWLHSLHSW*MPSSIMWLATW
Trigger: CCACGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TCAGGTGGGTCTGGAAGCTCTCAAAGTTGGAGAACTTaGGGTCGCATTGATTGCAAGGATACTCCCCATTGG +
Preference number: 6 (lower is better)
Translates to: SGGSGSSQSWRT*GRIDCKDTPHW
Trigger: CCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAGACCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp AGTCGAACATCTGGTTGCACAGCTTACACTCGTGGTTaGTGCCTTCCTCAATCATGTGGTTGGCAACGTGGA +
Preference number: 6 (lower is better)
Translates to: SRTSGCTAYTRG*CLPQSCGWQRG
Trigger: TCCACGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TGGATTTGGATCTCTCTCTCGTTCTCGAAGGTCATCTaGCACTTGATGCACTGGTATGTCTTTTTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: WIWISLSFSKVI*HLMHWYVFFRG
Trigger: GCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp TTGCTGTGGGCCAGTGGAATGTTCTTGTGGTTCTCCTaGATGTGCTTGGTGAGTTTCAGGATGGAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: LLWASGMFLWFS*MCLVSFRMEPK
Trigger: CTTTGGCTCCATCCTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp AGGTGCTTCTCCAGCAGGATGATGGCGTGGAAGGCCTaGCTGCAGAACTTACAGTTATACTTCTTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: RCFSSRMMAWKA*LQNLQLYFLLC
Trigger: ACACAGCAAGAAGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGCACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp GATGCCTTCCTCAATCATGTGGTTGGCAACGTGGATTaGGATCTCTCTCTCGTTCTCGAAGGTCATCTGGCA +
Preference number: 6 (lower is better)
Translates to: DAFLNHVVGNVD*DLSLVLEGHLA
Trigger: TGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACGTTGCCAACCACATGATTGAGGAAGGCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CCA 72 bp TGGTTGATGCCTTCCTCAATCATGTGGTTGGCAACGTaGATTTGGATCTCTCTCTCGTTCTCGAAGGTCATC +
Preference number: 6 (lower is better)
Translates to: WLMPSSIMWLAT*IWISLSFSKVI
Trigger: GATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACGTTGCCAACCACATGATTGAGGAAGGCATCAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp TGGAAGCTCTCAAAGTTGGAGAACTTGAGGTCGCATTaGTTGCAAGGATACTCCCCATTGGAGATGGAGTTG +
Preference number: 6 (lower is better)
Translates to: WKLSKLENLRSH*LQGYSPLEMEL
Trigger: CAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS CAA 72 bp CTGGAAGCTCTCAAAGTTGGAGAACTTGAGGTCGCATaGATTGCAAGGATACTCCCCATTGGAGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: LEALKVGELEVA*IARILPIGDGV
Trigger: AACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535559.5
ENST00000561648.5
ENST00000562520.1
ENST00000562871.5
ENST00000563137.7
ENST00000567169.5
CDS TCA 72 bp ACCTCCTTAATCTTCGATCCCAAAATTAGTCACCTGTaGTACTCAAGTAGGGGTTTGACTAAGCATTTCTCT +
Preference number: 6 (lower is better)
Translates to: TSLIFDPKISHL*YSSRGLTKHFS
Trigger: AGAGAAATGCTTAGTCAAACCCCTACTTGAGTATCACAGGTGACTAATTTTGGGATCGAAGATTAAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561648.5