RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF418 (Homo sapiens)

Ensembl gene IDs: ENSG00000196724

Ensembl transcript IDs: ENST00000396147.6, ENST00000425570.7, ENST00000595569.1, ENST00000595830.5, ENST00000599852.1, ENST00000600989.5

Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTaGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGG +
Preference number: 1 (lower is better)
Translates to: SCHSSLGRQTDIQFL*PTKDNQGLLPEHHG
Trigger: CCCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR CCA 90 bp GGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTaGAACGCTGAACCAACACTCTTCTTAGACCACAGGGTCATTCTT +
Preference number: 1 (lower is better)
Translates to: GVQKPPGWPLLDFFV*NAEPTLFLDHRVIL
Trigger: AAGAATGACCCTGTGGTCTAAGAAGAGTGTTGGTTCAGCGTTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR TCA 90 bp AAAGACAACCAAGGTTTACTTCCAGAACATCATGGGGTGAATGAATaGTGCACAGTGAACACCTGCCTCGTGGCCGACATAAAATGGCTT +
Preference number: 1 (lower is better)
Translates to: KDNQGLLPEHHGVNE*CTVNTCLVADIKWL
Trigger: AAGCCATTTTATGTCGGCCACGAGGCAGGTGTTCACTGTGCATCATTCATTCACCCCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR TCA 90 bp AACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGGGTGAATaGATGATGCACAGTGAACACCTGCCTCGTGGCCGACATAAAATG +
Preference number: 1 (lower is better)
Translates to: NERQPRFTSRTSWGE*MMHSEHLPRGRHKM
Trigger: CATTTTATGTCGGCCACGAGGCAGGTGTTCACTGTGCATCATTCATTCACCCCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR GCA 90 bp GCTGAACCAACACTCTTCTTAGACCACAGGGTCATTCTTAGGGTGTaGTTGAGTTACTGCTGTCAGATATATCTGTTATACAGTGTCGAA +
Preference number: 1 (lower is better)
Translates to: AEPTLFLDHRVILRV*LSYCCQIYLLYSVE
Trigger: TTCGACACTGTATAACAGATATATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAAGAGTGTTGGTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR GCA 90 bp CACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAACATGCAGATCATAATCAGTTCATA +
Preference number: 1 (lower is better)
Translates to: HIFTHDFHGGSSVRK*LNPKREHADHNQFI
Trigger: TATGAACTGATTATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
3UTR TCA 90 bp TTAGTCTCCCAAAACACTGGAATTAAAGGCATGAGTCCCTGTACATaGCGAGATGGGCTTTTATTAACCTCTTTGTTAGTTTCATCAATC +
Preference number: 1 (lower is better)
Translates to: LVSQNTGIKGMSPCT*RDGLLLTSLLVSSI
Trigger: GATTGATGAAACTAACAAAGAGGTTAATAAAAGCCCATCTCGTCATGTACAGGGACTCATGCCTTTAATTCCAGTGTTTTGGGAGACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR TCA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGGGGAACCCGGCAGGGTaGAAAATGCCACACAGCTCC +
Preference number: 2 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWGNPAG*KMPHSS
Trigger: GGAGCTGTGTGGCATTTTTCACCCTGCCGGGTTCCC...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR GCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGACTCAAGAGGCCCTTCTaGAGTGGGAGCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: RATPAWADRRTFNSSGQRLKRPF*SGSSSV
Trigger: TACAGAAGAGCTCCCACTGCAGAAGGGCCTCTTGAG...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGAGGCTGCAGTGAGCTaGGATCGTGCCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAEAAVS*DRATPA
Trigger: GGCTGGAGTGGCACGATCTCAGCTCACTGCAGCCTC...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGCCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 2 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR TCA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATGAGGCTGCAGTGAGCTaGGATCGTGCCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDEAAVS*DRATPA
Trigger: GGCTGGAGTGGCACGATCTCAGCTCACTGCAGCCTC...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR GCA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAATGCACAGTGAACACCTaGCTCGTGGCCGACATAAAA +
Preference number: 2 (lower is better)
Translates to: ARGSETSRLATPGFLRLECTVNT*LVADIK
Trigger: TTTTATGTCGGCCACGAGGCAGGTGTTCACTGTGCA...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR GCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCACCTGGAGGTGGAGGCTaGAGTGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAPGGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAGCCTCCACCTCCAGG...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR CCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCACGTGCCACTCCAGCCTaGGCAGACAGACGGACATTC +
Preference number: 2 (lower is better)
Translates to: FHGGSSVRKCLNPKREHARATPA*ADRRTF
Trigger: GAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGACAGCTCCAACATAATTaGGTTTATGCAGATGCTGAA +
Preference number: 2 (lower is better)
Translates to: RATPAWADRRTFNSSGQRQLQHN*VYADAE
Trigger: TTCAGCATCTGCATAAACTCAATTATGTTGGAGCTG...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGCCAAATATGAAAAGGTaGGGTGGGCAAAGGGAAATG +
Preference number: 2 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWPNMKR*GGQREM
Trigger: CATTTCCCTTTGCCCACCTCACCTTTTCATATTTGG...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR CCA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGTATGAAAAGGTGAGGTaGGCAAAGGGAAATGCCCTT +
Preference number: 2 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWYEKVR*AKGNAL
Trigger: AAGGGCATTTCCCTTTGCCCACCTCACCTTTTCATA...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR TCA 90 bp ATCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 2 (lower is better)
Translates to: IVPLQPGQTDGHSIPLANSLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...GTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR CCA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR CCA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SIPLANERQPRFTSRTSWNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR CCA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATCGTGCCACTCCAGCCTaGGCAGACAGACGGACATTC +
Preference number: 2 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNRATPA*ADRRTF
Trigger: GAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp TTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGATGAATGATGCACAGTaGACACCTGCCTCGTGGCCG +
Preference number: 2 (lower is better)
Translates to: FNSSGQRKTTKVYFQNIMMNDAQ*TPASWP
Trigger: CGGCCACGAGGCAGGTGTTCACTGTGCATCATTCAT...CATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR GCA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGCTCAAGAGGCCCTTCTaGAGTGGGAGCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: SIPLANERQPRFTSRTSWLKRPF*SGSSSV
Trigger: TACAGAAGAGCTCCCACTGCAGAAGGGCCTCTTGAG...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATGGGAACCCGGCAGGGTaGAAAATGCCACACAGCTCC +
Preference number: 2 (lower is better)
Translates to: HADHNQFIFIILGWRQMHGNPAG*KMPHSS
Trigger: GGAGCTGTGTGGCATTTTTCACCCTGCCGGGTTCCC...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR GCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCACTCAAGAGGCCCTTCTaGAGTGGGAGCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSLKRPF*SGSSSV
Trigger: TACAGAAGAGCTCCCACTGCAGAAGGGCCTCTTGAG...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
3UTR-3UTR CCA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAACTGTACATGACGAGATaGGCTTTTATTAACCTCTTT +
Preference number: 2 (lower is better)
Translates to: ARGSETSRLATPGFLRLELYMTR*AFINLF
Trigger: AAAGAGGTTAATAAAAGCCCATCTCGTCATGTACAG...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR TCA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATAAAGGGAAATGCCCTTaGGATCCCCGGGAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: HADHNQFIFIILGWRQMHKGKCP*DPREAE
Trigger: CTCAGCCTCCCGGGGATCTCAAGGGCATTTCCCTTT...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCACCAAATATGAAAAGGTaGGGTGGGCAAAGGGAAATG +
Preference number: 2 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAPNMKR*GGQREM
Trigger: CATTTCCCTTTGCCCACCTCACCTTTTCATATTTGG...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR GCA 90 bp ATTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATCTCAAGAGGCCCTTCTaGAGTGGGAGCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: IQFLWPTKDNQGLLPEHHLKRPF*SGSSSV
Trigger: TACAGAAGAGCTCCCACTGCAGAAGGGCCTCTTGAG...ATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR CCA 90 bp ACAAGAAATTCTCCAAGAGGGAGTTACCAATTCAACACATATTTACCCATGACTAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TRNSPRGSYQFNTYLPMTNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...AGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTGGAGAATTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCACCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 2 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
3UTR CAA 90 bp GAACCAACACTCTTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTaGAGTTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTC +
Preference number: 2 (lower is better)
Translates to: EPTLFLDHRVILRVC*SYCCQIYLLYSVEL
Trigger: GAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAAGAGTGTTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 2 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
3UTR-3UTR TCA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATCCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 2 (lower is better)
Translates to: HADHNQFIFIILGWRQMHPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAATCTGTTATCCAATaGCAGAAGGCAGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRQSVIQ*QKAEGF
Trigger: AAAGCCTTCTGCCTTCTGTCATTGGATAACAGATTG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
3UTR-3UTR TCA 90 bp ATTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 2 (lower is better)
Translates to: IQFLWPTKDNQGLLPEHHSLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...ATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR TCA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATCAGCTCCAACATAATTaGGTTTATGCAGATGCTGAA +
Preference number: 2 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNQLQHN*VYADAE
Trigger: TTCAGCATCTGCATAAACTCAATTATGTTGGAGCTG...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR GCA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATTCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNSSVRK*LNPKRE
Trigger: TTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGA...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR CCA 72 bp GGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTaGATTTCTTCGTTTGGAACGCTGAACCAACACTCT +
Preference number: 3 (lower is better)
Translates to: GQGFRNLQVGHS*ISSFGTLNQHS
Trigger: AGAGTGTTGGTTCAGCGTTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR TCA 72 bp CAACCAAGGTTTACTTCCAGAACATCATGGGGTGAATaGATGATGCACAGTGAACACCTGCCTCGTGGCCGA +
Preference number: 3 (lower is better)
Translates to: QPRFTSRTSWGE*MMHSEHLPRGR
Trigger: TCGGCCACGAGGCAGGTGTTCACTGTGCATCATTCATTCACCCCATGATGTTCTGGAAGTAAACCTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR CCA 72 bp AAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTaGAACGCTGAACCAACACTCTTCTTAGACCACAGG +
Preference number: 3 (lower is better)
Translates to: KPPGWPLLDFFV*NAEPTLFLDHR
Trigger: CCTGTGGTCTAAGAAGAGTGTTGGTTCAGCGTTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR TCA 72 bp CAAGGTTTACTTCCAGAACATCATGGGGTGAATGAATaGTGCACAGTGAACACCTGCCTCGTGGCCGACATA +
Preference number: 3 (lower is better)
Translates to: QGLLPEHHGVNE*CTVNTCLVADI
Trigger: TATGTCGGCCACGAGGCAGGTGTTCACTGTGCATCATTCATTCACCCCATGATGTTCTGGAAGTAAACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR-3UTR CAA 90 bp ACAAGAAATTCTCCAAGAGGGAGTTACCAATTCAACACATATTTACCCATGACTAGGCAGGAGAATCGCTaGAACCCTGGAGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: TRNSPRGSYQFNTYLPMTRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAGCGATTCTCCTGCCT...AGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTGGAGAATTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR GCA 72 bp ACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAACATGCAGATCATAAT +
Preference number: 3 (lower is better)
Translates to: THDFHGGSSVRK*LNPKREHADHN
Trigger: ATTATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
3UTR-3UTR CAA 90 bp TATACAGTGTCGAACTCCTGGCCTCCAGGATGTTCTTGCCTTAGTCTCCCAAAAGCCACACTTTACAAATaGAGATTATGTCTCCAGTTA +
Preference number: 3 (lower is better)
Translates to: YTVSNSWPPGCSCLSLPKATLYK*RLCLQL
Trigger: TAACTGGAGACATAATCTCAATTTGTAAAGTGTGGC...TTTTGGGAGACTAAGGCAAGAACATCCTGGAGGCCAGGAGTTCGACACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
3UTR TCA 72 bp CAAGAGGGAGTTACCAATTCAACACATATTTACCCATaGCTTCCACGGTGGCTCTTCTGTAAGGAAATGCTT +
Preference number: 3 (lower is better)
Translates to: QEGVTNSTHIYP*LPRWLFCKEML
Trigger: AAGCATTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
3UTR GCA 72 bp ACACTCTTCTTAGACCACAGGGTCATTCTTAGGGTGTaGTTGAGTTACTGCTGTCAGATATATCTGTTATAC +
Preference number: 3 (lower is better)
Translates to: TLFLDHRVILRV*LSYCCQIYLLY
Trigger: GTATAACAGATATATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAAGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAAAGGGAAATGCCCTTaGGATCCCCGGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRKGKCP*DPREAE
Trigger: CTCAGCCTCCCGGGGATCTCAAGGGCATTTCCCTTT...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAACGGGGCCTAAGATCTaGCTCTGTGCAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRTGPKI*LCAARR
Trigger: CCTTCTTGCTGCACAGAGGCAGATCTTAGGCCCCGT...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000425570.7
CDS-3UTR CCA 90 bp ATCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IVPLQPGQTDGHSIPLANNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...GTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAAGATTCTTTGCAGCCAGATaGTGCCTGAGCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLQPGQTDGHSIPLANERFFAAR*CLSREP
Trigger: AGGCTCCCGGCTCAGGCATCATCTGGCTGCAAAGAA...TCTTTCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000425570.7
CDS-3UTR TCA 90 bp CCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAAGAATGAATGATGCACAGTaGACACCTGCCTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PLQPGQTDGHSIPLANERMNDAQ*TPASWP
Trigger: CGGCCACGAGGCAGGTGTTCACTGTGCATCATTCAT...TCTTTCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACCTGTGTTGCACTTGGTaGCCCCTCTACAATGACGAC +
Preference number: 4 (lower is better)
Translates to: IVPLQPGQTDGHSIPLANLCCTW*PLYNDD
Trigger: GTCGTCATTGTAGAGGGGTCACCAAGTGCAACACAG...GTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR CCA 90 bp ATCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAGGCCTTCTTGCATaGCTCCACATCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: IVPLQPGQTDGHSIPLANEGLLA*LHIPTE
Trigger: TTCTGTGGGGATGTGGAGCCATGCAAGAAGGCCTTC...GTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR TCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCGAGGCTGCAGTGAGCTaGGATCGTGCCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCEAAVS*DRATPA
Trigger: GGCTGGAGTGGCACGATCTCAGCTCACTGCAGCCTC...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCGGGAACCCGGCAGGGTaGAAAATGCCACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCGNPAG*KMPHSS
Trigger: GGAGCTGTGTGGCATTTTTCACCCTGCCGGGTTCCC...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGACTTCGTTTGGAACGCTaGACCAACACTCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRLRLER*TNTLLR
Trigger: TCTAAGAAGAGTGTTGGTTCAGCGTTCCAAACGAAG...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGACCTGGAGGTGGAGGCTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRPGGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAGCCTCCACCTCCAGG...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp ATCGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGTGTGTTCTCTTCTTTaGAGCCAGATGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IVPLQPGQTDGHSIPLANVCSLL*SQMMPA
Trigger: TGCAGGCATCATCTGGCTGCAAAGAAGAGAACACAC...GTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595830.5
CDS-3UTR CCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAGTGGCCGACATAAAATaGCTTTTGCCAGATAACCGA +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRVADIK*LLPDNR
Trigger: TCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCAC...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCTTCTTTGCAGCCAGATaGTGCCTGAGCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCFFAAR*CLSREP
Trigger: AGGCTCCCGGCTCAGGCATCATCTGGCTGCAAAGAA...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000600989.5
CDS-3UTR TCA 90 bp CTCGTGGCCGACATAAAATGGCTTTTGCCAGATAACCGACATCATGTCTGGCAAAAAGGGAAATGCCCTTaGGATCCCCGGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVADIKWLLPDNRHHVWQKGKCP*DPREAE
Trigger: CTCAGCCTCCCGGGGATCTCAAGGGCATTTCCCTTT...TTGCCAGACATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCATCCACACCAACAACCTaGGCCGGGAGCCTCAGCGCG +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSSTPTT*AGSLSA
Trigger: CGCGCTGAGGCTCCCGGCTCAGGTTGTTGGTGTGGA...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599852.1
CDS-3UTR GCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGAAGTGAGCTGAGATCGTaGCACTCCAGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRSELRS*HSSLGR
Trigger: TCTGCCCAGGCTGGAGTGGCACGATCTCAGCTCACT...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATTCTTTGCAGCCAGATaGTGCCTGAGCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSFFAAR*CLSREP
Trigger: AGGCTCCCGGCTCAGGCATCATCTGGCTGCAAAGAA...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000600989.5
CDS-3UTR TCA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAACCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ARGSETSRLATPGFLRLEPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp TTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTTGAGTTACTGCTGTCAGATAGGGAACCCGGCAGGGTaGAAAATGCCACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLDHRVILRVCLSYCCQIGNPAG*KMPHSS
Trigger: GGAGCTGTGTGGCATTTTTCACCCTGCCGGGTTCCC...TATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGAATGAATGATGCACAGTaGACACCTGCCTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRMNDAQ*TPASWP
Trigger: CGGCCACGAGGCAGGTGTTCACTGTGCATCATTCAT...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAGAGGCTGCAGTGAGCTaGGATCGTGCCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKEAAVS*DRATPA
Trigger: GGCTGGAGTGGCACGATCTCAGCTCACTGCAGCCTC...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGGAGGCTGCAGTGAGCTaGGATCGTGCCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVREAAVS*DRATPA
Trigger: GGCTGGAGTGGCACGATCTCAGCTCACTGCAGCCTC...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAAAAGGGAAATGCCCTTaGGATCCCCGGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAKGKCP*DPREAE
Trigger: CTCAGCCTCCCGGGGATCTCAAGGGCATTTCCCTTT...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATCCTGGAGGTGGAGGCTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDPGGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAGCCTCCACCTCCAGG...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGATGGGCTGGAGGCAAATaGATACAGTTTACCAAATAT +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRWAGGK*IQFTKY
Trigger: ATATTTGGTAAACTGTATGCATTTGCCTCCAGCCCA...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp ATAGTATTTTCACTTATCACCCTCCGCCTAGCTCAAAACAAAGGGCCTCATTCCCGTGCCACTCCAGCCTaGGCAGACAGACGGACATTC +
Preference number: 4 (lower is better)
Translates to: IVFSLITLRLAQNKGPHSRATPA*ADRRTF
Trigger: GAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG...GGAATGAGGCCCTTTGTTTTGAGCTAGGCGGAGGGTGATAAGTGAAAATACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CCA 90 bp GGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATCGTGCCACTCCAGCCTaGGCAGACAGACGGACATTC +
Preference number: 4 (lower is better)
Translates to: GGSSVRKCLNPKREHADHRATPA*ADRRTF
Trigger: GAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG...ATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
3UTR CAA 72 bp GTGAACACCTGCCTCGTGGCCGACATAAAATGGCTTTaGCCAGATAACCGACATCATGTCTGGCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VNTCLVADIKWL*PDNRHHVWQGN
Trigger: GTTCCCTTGCCAGACATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCACGAGGCAGGTGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCACTGCCCCAGGAGTGCTaGCCTGAGACACTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSLPQEC*PETLFV
Trigger: TACAAAGAGTGTCTCAGGTCAGCACTCCTGGGGCAG...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAGGGAACCCGGCAGGGTaGAAAATGCCACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKGNPAG*KMPHSS
Trigger: GGAGCTGTGTGGCATTTTTCACCCTGCCGGGTTCCC...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCCTCAAGAGGCCCTTCTaGAGTGGGAGCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCLKRPF*SGSSSV
Trigger: TACAGAAGAGCTCCCACTGCAGAAGGGCCTCTTGAG...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGATCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRSSVRK*LNPKRE
Trigger: TTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGA...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGACTGTACATGACGAGATaGGCTTTTATTAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RATPAWADRRTFNSSGQRLYMTR*AFINLF
Trigger: AAAGAGGTTAATAAAAGCCCATCTCGTCATGTACAG...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGCTGGTGCGGACGGTTTaGACTATCATACAATTTATT +
Preference number: 4 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWLVRTV*TIIQFI
Trigger: AATAAATTGTATGATAGTTCAAACCGTCCGCACCAG...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAACAATCTGTTATCCAATaGCAGAAGGCAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ARGSETSRLATPGFLRLEQSVIQ*QKAEGF
Trigger: AAAGCCTTCTGCCTTCTGTCATTGGATAACAGATTG...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp CCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAAGAACAGTTTACCAAATATaGAAAGGTGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PLQPGQTDGHSIPLANERTVYQI*KGEVGK
Trigger: TTTGCCCACCTCACCTTTTCATATTTGGTAAACTGT...TCTTTCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAAAGACATAGGGTTTATTaGGGACTTAGATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARGSETSRLATPGFLRLERHRVY*GLRYRA
Trigger: TGCCCTGTATCTAAGTCCTCAATAAACCCTATGTCT...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCCTTCAAATGCCACAGTaGCCTGCATTATGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCLQMPQ*PALWQE
Trigger: CTCCTGCCATAATGCAGGGCACTGTGGCATTTGAAG...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCAAGTGAGCTGAGATCGTaGCACTCCAGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSSELRS*HSSLGR
Trigger: TCTGCCCAGGCTGGAGTGGCACGATCTCAGCTCACT...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAGTGAGCTGAGATCGTaGCACTCCAGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRSELRS*HSSLGR
Trigger: TCTGCCCAGGCTGGAGTGGCACGATCTCAGCTCACT...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATCCTGGAGGTGGAGGCTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNPGGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAGCCTCCACCTCCAGG...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAACCGACATCATGTCTaGCAAGGGAACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRNRHHV*QGNPAG
Trigger: CCCTGCCGGGTTCCCTTGCCAGACATGATGTCGGTT...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCACTGCCCCAGGAGTGCTaGCCTGAGACACTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSLPQEC*PETLFV
Trigger: TACAAAGAGTGTCTCAGGTCAGCACTCCTGGGGCAG...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCATTCTTTGCAGCCAGATaGTGCCTGCAGACAAATGGG +
Preference number: 4 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAFFAAR*CLQTNG
Trigger: CCCATTTGTCTGCAGGCATCATCTGGCTGCAAAGAA...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595830.5
CDS-3UTR GCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAACGGGGCCTAAGATCTaGCTCTGTGCAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKTGPKI*LCAARR
Trigger: CCTTCTTGCTGCACAGAGGCAGATCTTAGGCCCCGT...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000425570.7
CDS-3UTR GCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCAACGGGGCCTAAGATCTaGCTCTGTGCAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSTGPKI*LCAARR
Trigger: CCTTCTTGCTGCACAGAGGCAGATCTTAGGCCCCGT...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000599852.1
CDS-3UTR GCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCACTTCAAATGCCACAGTaGCCTGCATTATGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FHGGSSVRKCLNPKREHALQMPQ*PALWQE
Trigger: CTCCTGCCATAATGCAGGGCACTGTGGCATTTGAAG...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCACTTCAAATGCCACAGTaGCCTGCATTATGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSLQMPQ*PALWQE
Trigger: CTCCTGCCATAATGCAGGGCACTGTGGCATTTGAAG...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATGCACAGTGAACACCTaGCTCGTGGCCGACATAAAA +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSCTVNT*LVADIK
Trigger: TTTTATGTCGGCCACGAGGCAGGTGTTCACTGTGCA...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCACAGAAACCTCCAGGTTaGCCACTCCTGGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSQKPPG*PLLDFF
Trigger: GAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTG...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CCA 90 bp CTCGTGGCCGACATAAAATGGCTTTTGCCAGATAACCGACATCATGTCTGGCAAATGCCTGCAGACAAATaGGACTGTGGTAACATCACC +
Preference number: 4 (lower is better)
Translates to: LVADIKWLLPDNRHHVWQMPADK*DCGNIT
Trigger: GGTGATGTTACCACAGTCCCATTTGTCTGCAGGCAT...TTGCCAGACATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595830.5
CDS-3UTR TCA 90 bp GGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATCAGGAGTTTAAACTCTaGTCCTCCTTCCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGSSVRKCLNPKREHADHQEFKL*SSFLLP
Trigger: AGGGAGGAGGAAGGAGGATCAGAGTTTAAACTCCTG...ATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp ATTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATCTGCCCCAGGAGTGCTaGCCTGAGACACTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: IQFLWPTKDNQGLLPEHHLPQEC*PETLFV
Trigger: TACAAAGAGTGTCTCAGGTCAGCACTCCTGGGGCAG...ATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp GGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATTTCTCTCCAAGGTACTaGTTCTGGTGCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: GGSSVRKCLNPKREHADHFSPRY*FWCGRF
Trigger: AAACCGTCCGCACCAGAATCAGTACCTTGGAGAGAA...ATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCACCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCCCAAATATGAAAAGGTaGGGTGGGCAAAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCPNMKR*GGQREM
Trigger: CATTTCCCTTTGCCCACCTCACCTTTTCATATTTGG...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CCA 90 bp ACAAGAAATTCTCCAAGAGGGAGTTACCAATTCAACACATATTTACCCATGACTCGTGCCACTCCAGCCTaGGCAGACAGACGGACATTC +
Preference number: 4 (lower is better)
Translates to: TRNSPRGSYQFNTYLPMTRATPA*ADRRTF
Trigger: GAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG...AGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTGGAGAATTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCTATGAAAAGGTGAGGTaGGCAAAGGGAAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCYEKVR*AKGNAL
Trigger: AAGGGCATTTCCCTTTGCCCACCTCACCTTTTCATA...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CCA 90 bp TTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTTGAGTTACTGCTGTCAGATACAGAAACCTCCAGGTTaGCCACTCCTGGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLDHRVILRVCLSYCCQIQKPPG*PLLDFF
Trigger: GAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTG...TATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAATTCTCTCCAAGGTACTaGTTCTGGTGCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKFSPRY*FWCGRF
Trigger: AAACCGTCCGCACCAGAATCAGTACCTTGGAGAGAA...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCATTCTCTCCAAGGTACTaGTTCTGGTGCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSFSPRY*FWCGRF
Trigger: AAACCGTCCGCACCAGAATCAGTACCTTGGAGAGAA...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGAAACCCAGAGCTGTCTTaGAATGATTTCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRNPELS*NDFPHS
Trigger: TGAATGTGGGAAATCATTTCAAGACAGCTCTGGGTT...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGAATGAGTCCCTGTACATaGCGAGATGGGCTTTTATTA +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRMSPCT*RDGLLL
Trigger: TAATAAAAGCCCATCTCGTCATGTACAGGGACTCAT...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGGTGTGTTCTCTTCTTTaGAGCCAGATGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SIPLANERQPRFTSRTSWVCSLL*SQMMPE
Trigger: CTCAGGCATCATCTGGCTGCAAAGAAGAGAACACAC...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000425570.7
CDS-3UTR GCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGTGCACAGTGAACACCTaGCTCGTGGCCGACATAAAA +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRCTVNT*LVADIK
Trigger: TTTTATGTCGGCCACGAGGCAGGTGTTCACTGTGCA...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATCCTCCAGGATGTTCTTaGCTTAGTCTCCCAAAACAC +
Preference number: 4 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDPPGCS*LSLPKH
Trigger: GTGTTTTGGGAGACTAAGGCAAGAACATCCTGGAGG...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp TTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTTGAGTTACTGCTGTCAGATACCTCCAGGATGTTCTTaGCTTAGTCTCCCAAAACAC +
Preference number: 4 (lower is better)
Translates to: FLDHRVILRVCLSYCCQIPPGCS*LSLPKH
Trigger: GTGTTTTGGGAGACTAAGGCAAGAACATCCTGGAGG...TATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCAGTGGCCGACATAAAATaGCTTTTGCCAGATAACCGA +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSVADIK*LLPDNR
Trigger: TCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCAC...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATATGAAAAGGTGAGGTaGGCAAAGGGAAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSYEKVR*AKGNAL
Trigger: AAGGGCATTTCCCTTTGCCCACCTCACCTTTTCATA...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCATATGAAAAGGTGAGGTaGGCAAAGGGAAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: FHGGSSVRKCLNPKREHAYEKVR*AKGNAL
Trigger: AAGGGCATTTCCCTTTGCCCACCTCACCTTTTCATA...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGACTGGTGCGGACGGTTTaGACTATCATACAATTTATT +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRLVRTV*TIIQFI
Trigger: AATAAATTGTATGATAGTTCAAACCGTCCGCACCAG...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp TTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGCCAGTAAGAACCCTCTaGTCAAGAAGATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FNSSGQRKTTKVYFQNIMPVRTL*SRRCTE
Trigger: CTCTGTGCATCTTCTTGATCAGAGGGTTCTTACTGG...CATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CTCGTGGCCGACATAAAATGGCTTTTGCCAGATAACCGACATCATGTCTGGCAAAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 4 (lower is better)
Translates to: LVADIKWLLPDNRHHVWQSLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...TTGCCAGACATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAATCCCAAGTCATTCTATaGAGGCCTTCTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKSQVIL*RPSCMA
Trigger: AGCCATGCAAGAAGGCCTTCATAGAATGACTTGGGA...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR CCA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGTGCACAGAATTCTCATaGCTCCCAATAGCAATGCAG +
Preference number: 4 (lower is better)
Translates to: SIPLANERQPRFTSRTSWCTEFS*LPIAMQ
Trigger: CTGCATTGCTATTGGGAGCCATGAGAATTCTGTGCA...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGGAGTTTAAACTCTaGTCCTCCTTCCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRQEFKL*SSFLLP
Trigger: AGGGAGGAGGAAGGAGGATCAGAGTTTAAACTCCTG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGTTCTCTCCAAGGTACTaGTTCTGGTGCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRFSPRY*FWCGRF
Trigger: AAACCGTCCGCACCAGAATCAGTACCTTGGAGAGAA...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp ATAGTATTTTCACTTATCACCCTCCGCCTAGCTCAAAACAAAGGGCCTCATTCCCAATCTGTTATCCAATaGCAGAAGGCAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IVFSLITLRLAQNKGPHSQSVIQ*QKAEGF
Trigger: AAAGCCTTCTGCCTTCTGTCATTGGATAACAGATTG...GGAATGAGGCCCTTTGTTTTGAGCTAGGCGGAGGGTGATAAGTGAAAATACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGCCAAATATGAAAAGGTaGGGTGGGCAAAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRPNMKR*GGQREM
Trigger: CATTTCCCTTTGCCCACCTCACCTTTTCATATTTGG...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp TTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAACAGTTTACCAAATATaGAAAGGTGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: FHGGSSVRKCLNPKREHATVYQI*KGEVGK
Trigger: TTTGCCCACCTCACCTTTTCATATTTGGTAAACTGT...TGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATAGACATAGGGTTTATTaGGGACTTAGATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDRHRVY*GLRYRA
Trigger: TGCCCTGTATCTAAGTCCTCAATAAACCCTATGTCT...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATGGGCTGGAGGCAAATaGATACAGTTTACCAAATAT +
Preference number: 4 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSWAGGK*IQFTKY
Trigger: ATATTTGGTAAACTGTATGCATTTGCCTCCAGCCCA...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRSSVRK*LNPKRE
Trigger: TTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGA...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR GCA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCTCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCSSVRK*LNPKRE
Trigger: TTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGA...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGTATGAAAAGGTGAGGTaGGCAAAGGGAAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRYEKVR*AKGNAL
Trigger: AAGGGCATTTCCCTTTGCCCACCTCACCTTTTCATA...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR TCA 90 bp TTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGAAGTCCTTTCCACTCTaGATGAAGATAGATGACTCC +
Preference number: 4 (lower is better)
Translates to: FNSSGQRKTTKVYFQNIMKSFPL*MKIDDS
Trigger: GGAGTCATCTATCTTCATTCAGAGTGGAAAGGACTT...CATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAAAGTCCTTTCCACTCTaGATGAAGATAGATGACTCC +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKKSFPL*MKIDDS
Trigger: GGAGTCATCTATCTTCATTCAGAGTGGAAAGGACTT...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAAACCCAGAGCTGTCTTaGAATGATTTCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKNPELS*NDFPHS
Trigger: TGAATGTGGGAAATCATTTCAAGACAGCTCTGGGTT...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCAAACCCAGAGCTGTCTTaGAATGATTTCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSNPELS*NDFPHS
Trigger: TGAATGTGGGAAATCATTTCAAGACAGCTCTGGGTT...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp TTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTTGAGTTACTGCTGTCAGATAAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 4 (lower is better)
Translates to: FLDHRVILRVCLSYCCQISLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...TATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGACAGTTTACCAAATATaGAAAGGTGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SIPLANERQPRFTSRTSWTVYQI*KGEVGK
Trigger: TTTGCCCACCTCACCTTTTCATATTTGGTAAACTGT...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGATGAGTCCCTGTACATaGCGAGATGGGCTTTTATTA +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRMSPCT*RDGLLL
Trigger: TAATAAAAGCCCATCTCGTCATGTACAGGGACTCAT...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR TCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGGACAGACGGACATTCTaGGACACTCTTTGTATAGAA +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRDRRTF*DTLCIE
Trigger: TTCTATACAAAGAGTGTCTCAGAATGTCCGTCTGTC...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600989.5
CDS-3UTR GCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGGTGTGTTCTCTTCTTTaGAGCCAGATGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRVCSLL*SQMMPE
Trigger: CTCAGGCATCATCTGGCTGCAAAGAAGAGAACACAC...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000425570.7
CDS-3UTR GCA 90 bp ATAGTATTTTCACTTATCACCCTCCGCCTAGCTCAAAACAAAGGGCCTCATTCCTGGGCTGGAGGCAAATaGATACAGTTTACCAAATAT +
Preference number: 4 (lower is better)
Translates to: IVFSLITLRLAQNKGPHSWAGGK*IQFTKY
Trigger: ATATTTGGTAAACTGTATGCATTTGCCTCCAGCCCA...GGAATGAGGCCCTTTGTTTTGAGCTAGGCGGAGGGTGATAAGTGAAAATACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR GCA 90 bp ATTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATCTTCAAATGCCACAGTaGCCTGCACAGAATTCTCAT +
Preference number: 4 (lower is better)
Translates to: IQFLWPTKDNQGLLPEHHLQMPQ*PAQNSH
Trigger: ATGAGAATTCTGTGCAGGGCACTGTGGCATTTGAAG...ATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR TCA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGCTGGTGCGGACGGTTTaGACTATCATACAATTTATT +
Preference number: 4 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRLVRTV*TIIQFI
Trigger: AATAAATTGTATGATAGTTCAAACCGTCCGCACCAG...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCACTGGTGCGGACGGTTTaGACTATCATACAATTTATT +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSLVRTV*TIIQFI
Trigger: AATAAATTGTATGATAGTTCAAACCGTCCGCACCAG...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp ATTCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATCAATCTGTTATCCAATaGCAGAAGGCAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IQFLWPTKDNQGLLPEHHQSVIQ*QKAEGF
Trigger: AAAGCCTTCTGCCTTCTGTCATTGGATAACAGATTG...ATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCACAGCTCCAACATAATTaGGTTTATGCAGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSQLQHN*VYADAE
Trigger: TTCAGCATCTGCATAAACTCAATTATGTTGGAGCTG...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCTTCGTTTGGAACGCTaGACCAACACTCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRLRLER*TNTLLR
Trigger: TCTAAGAAGAGTGTTGGTTCAGCGTTCCAAACGAAG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CCA 90 bp GGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATCTGTACATGACGAGATaGGCTTTTATTAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: GGSSVRKCLNPKREHADHLYMTR*AFINLF
Trigger: AAAGAGGTTAATAAAAGCCCATCTCGTCATGTACAG...ATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCCCACTCCCTTGTTATaGAGAATGGTCTGCATTATG +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRPTPLL*RMVCIM
Trigger: CATAATGCAGACCATTCTCCATAACAAGGGAGTGGG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGAAGTCCTTTCCACTCTaGATGAAGATAGATGACTCC +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRKSFPL*MKIDDS
Trigger: GGAGTCATCTATCTTCATTCAGAGTGGAAAGGACTT...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR GCA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATTGGGCTGGAGGCAAATaGATACAGTTTACCAAATAT +
Preference number: 4 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNWAGGK*IQFTKY
Trigger: ATATTTGGTAAACTGTATGCATTTGCCTCCAGCCCA...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp ACAAGAAATTCTCCAAGAGGGAGTTACCAATTCAACACATATTTACCCATGACTAAGTCCTTTCCACTCTaGATGAAGATAGATGACTCC +
Preference number: 4 (lower is better)
Translates to: TRNSPRGSYQFNTYLPMTKSFPL*MKIDDS
Trigger: GGAGTCATCTATCTTCATTCAGAGTGGAAAGGACTT...AGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTGGAGAATTTCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRSLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGCTCCAACATAATTaGGTTTATGCAGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRQLQHN*VYADAE
Trigger: TTCAGCATCTGCATAAACTCAATTATGTTGGAGCTG...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR TCA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATAGTTTATGCAGATGCTaGAGGTATGTCAATTTAGGC +
Preference number: 4 (lower is better)
Translates to: HADHNQFIFIILGWRQMHSLCRC*RYVNLG
Trigger: GCCTAAATTGACATACCTTCAGCATCTGCATAAACT...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR TCA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATACAGTTTACCAAATATaGAAAGGTGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: HADHNQFIFIILGWRQMHTVYQI*KGEVGK
Trigger: TTTGCCCACCTCACCTTTTCATATTTGGTAAACTGT...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR GCA 90 bp ACAAGAAATTCTCCAAGAGGGAGTTACCAATTCAACACATATTTACCCATGACTTCTTCTGTAAGGAAATaGTTGAACCCAAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TRNSPRGSYQFNTYLPMTSSVRK*LNPKRE
Trigger: TTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGA...AGTCATGGGTAAATATGTGTTGAATTGGTAACTCCCTCTTGGAGAATTTCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
3UTR CAA 72 bp GAACATGCAGATCATAATCAGTTCATATTTATAATCTaGGGCTGGAGGCAAATGCATACAGTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: EHADHNQFIFII*GWRQMHTVYQI
Trigger: TATTTGGTAAACTGTATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATGTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CGTGCCACTCCAGCCTGGGCAGACAGACGGACATTCAATTCCTCTGGCCAACGAAGGCAGGAGAATCGCTaGAACCCTGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: RATPAWADRRTFNSSGQRRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAGCGATTCTCCTGCCT...TCGTTGGCCAGAGGAATTGAATGTCCGTCTGTCTGCCCAGGCTGGAGTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGGCAGGAGAATCGCTaGAACCCTGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAGCGATTCTCCTGCCT...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGTCAGAAACCTCCAGGTaGGCCACTCCTGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWSETSR*ATPGFL
Trigger: AAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGA...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAGGCAGGAGAATCGCTaGAACCCTGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAGCGATTCTCCTGCCT...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp AGGCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGTCTGGTGCGGACGGTTaGAACTATCATACAATTTAT +
Preference number: 5 (lower is better)
Translates to: RPGVQKPPGWPLLDFFVWSGADG*NYHTIY
Trigger: ATAAATTGTATGATAGTTCAAACCGTCCGCACCAGA...CCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATAGGCAGGAGAATCGCTaGAACCCTGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAGCGATTCTCCTGCCT...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CTCGTGGCCGACATAAAATGGCTTTTGCCAGATAACCGACATCATGTCTGGCAATCAGAAACCTCCAGGTaGGCCACTCCTGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LVADIKWLLPDNRHHVWQSETSR*ATPGFL
Trigger: AAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGA...TTGCCAGACATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTCGGCCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp GCCAGGGGTTCAGAAACCTCCAGGTTGGCCACTCCTGGATTTCTTCGTTTGGAAGCCACACTTTACAAATaGAGATTATGTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: ARGSETSRLATPGFLRLEATLYK*RLCLQL
Trigger: TAACTGGAGACATAATCTCAATTTGTAAAGTGTGGC...TTCCAAACGAAGAAATCCAGGAGTGGCCAACCTGGAGGTTTCTGAACCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCAGGGAAGTCTCTGCTGTaGAACAAATACGTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSGKSLL*NKYVFG
Trigger: ACCAAACACGTATTTGTTCAACAGCAGAGACTTCCC...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATTCTATGAAGGCCTTCTaGCATGGCTCCACATCCCCA +
Preference number: 5 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNSMKAF*HGSTSP
Trigger: TGGGGATGTGGAGCCATGCAAGAAGGCCTTCATAGA...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR CAA 90 bp CTTCCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCTCTGGTGCGGACGGTTaGAACTATCATACAATTTAT +
Preference number: 5 (lower is better)
Translates to: LPRWLFCKEMLEPKERTCSGADG*NYHTIY
Trigger: ATAAATTGTATGATAGTTCAAACCGTCCGCACCAGA...GCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp TCAATTCCTCTGGCCAACGAAAGACAACCAAGGTTTACTTCCAGAACATCATGGTTAAATCCCACTCCCTaGTTATGGAGAATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: SIPLANERQPRFTSRTSWLNPTP*LWRMVC
Trigger: GCAGACCATTCTCCATAACAAGGGAGTGGGATTTAA...CCATGATGTTCTGGAAGTAAACCTTGGTTGTCTTTCGTTGGCCAGAGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425570.7
CDS-3UTR CAA 90 bp TATACAGTGTCGAACTCCTGGCCTCCAGGATGTTCTTGCCTTAGTCTCCCAAAATTCATATTTATAATCTaGGGCTGGAGGCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: YTVSNSWPPGCSCLSLPKFIFII*GWRQMH
Trigger: ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAA...TTTTGGGAGACTAAGGCAAGAACATCCTGGAGGCCAGGAGTTCGACACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp CCACGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATTCATATTTATAATCTaGGGCTGGAGGCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: PRWLFCKEMLEPKERTCRFIFII*GWRQMH
Trigger: ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAA...TCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp TTACTGCTGTCAGATATATCTGTTATACAGTGTCGAACTCCTGGCCTCCAGGATTCTGGTGCGGACGGTTaGAACTATCATACAATTTAT +
Preference number: 5 (lower is better)
Translates to: LLLSDISVIQCRTPGLQDSGADG*NYHTIY
Trigger: ATAAATTGTATGATAGTTCAAACCGTCCGCACCAGA...ATCCTGGAGGCCAGGAGTTCGACACTGTATAACAGATATATCTGACAGCAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp GGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATGACATAAAATGGCTTTaGCCAGATAACCGACATCAT +
Preference number: 5 (lower is better)
Translates to: GGSSVRKCLNPKREHADHDIKWL*PDNRHH
Trigger: ATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTC...ATGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CGGTGGCTCTTCTGTAAGGAAATGCTTGAACCCAAAGAGAGAACATGCAGATCATTCATATTTATAATCTaGGGCTGGAGGCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: RWLFCKEMLEPKERTCRSFIFII*GWRQMH
Trigger: ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAA...TGATCTGCATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGAAGAGCCACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAGACATAAAATGGCTTTaGCCAGATAACCGACATCAT +
Preference number: 5 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKDIKWL*PDNRHH
Trigger: ATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTC...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAATCTGTAAGGAAATGCTaGAACCCAAAGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKSVRKC*NPKREH
Trigger: ATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGA...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp ATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGCAGATGGCTCCGTCATCTGTAAGGAAATGCTaGAACCCAAAGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: IEFMQMLKVCQFRQMAPSSVRKC*NPKREH
Trigger: ATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGA...TGACGGAGCCATCTGCCTAAATTGACATACCTTCAGCATCTGCATAAACTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp TTACCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGTCTGTAAGGAAATGCTaGAACCCAAAGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: LPIQHIFTHDFHGGSSVRSVRKC*NPKREH
Trigger: ATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGA...CCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000600989.5
CDS-3UTR CAA 90 bp TTCTTAGACCACAGGGTCATTCTTAGGGTGTGCTTGAGTTACTGCTGTCAGATAGCCACACTTTACAAATaGAGATTATGTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: FLDHRVILRVCLSYCCQIATLYK*RLCLQL
Trigger: TAACTGGAGACATAATCTCAATTTGTAAAGTGTGGC...TATCTGACAGCAGTAACTCAAGCACACCCTAAGAATGACCCTGTGGTCTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396147.6
ENST00000595830.5
CDS-3UTR CAA 90 bp CCAATTCAACACATATTTACCCATGACTTCCACGGTGGCTCTTCTGTAAGGAAAGCCACACTTTACAAATaGAGATTATGTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: PIQHIFTHDFHGGSSVRKATLYK*RLCLQL
Trigger: TAACTGGAGACATAATCTCAATTTGTAAAGTGTGGC...TTTCCTTACAGAAGAGCCACCGTGGAAGTCATGGGTAAATATGTGTTGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CACAGCTCCAACATAATTGAGTTTATGCAGATGCTGAAGGTATGTCAATTTAGGTCTGGTGCGGACGGTTaGAACTATCATACAATTTAT +
Preference number: 5 (lower is better)
Translates to: HSSNIIEFMQMLKVCQFRSGADG*NYHTIY
Trigger: ATAAATTGTATGATAGTTCAAACCGTCCGCACCAGA...CCTAAATTGACATACCTTCAGCATCTGCATAAACTCAATTATGTTGGAGCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
ENST00000599852.1
CDS-3UTR CAA 90 bp GTTCCCCTATTGCTGTGTAATTCACAAGAAATTCTCCAAGAGGGAGTTACCAATTTCATATTTATAATCTaGGGCTGGAGGCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: VPLLLCNSQEILQEGVTNFIFII*GWRQMH
Trigger: ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAA...ATTGGTAACTCCCTCTTGGAGAATTTCTTGTGAATTACACAGCAATAGGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATGACATAAAATGGCTTTaGCCAGATAACCGACATCAT +
Preference number: 5 (lower is better)
Translates to: HADHNQFIFIILGWRQMHDIKWL*PDNRHH
Trigger: ATGATGTCGGTTATCTGGCAAAAGCCATTTTATGTC...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS-3UTR CAA 90 bp CATGCAGATCATAATCAGTTCATATTTATAATCTTGGGCTGGAGGCAAATGCATTCTGTAAGGAAATGCTaGAACCCAAAGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: HADHNQFIFIILGWRQMHSVRKC*NPKREH
Trigger: ATGTTCTCTCTTTGGGTTCAAGCATTTCCTTACAGA...ATGCATTTGCCTCCAGCCCAAGATTATAAATATGAACTGATTATGATCTGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396147.6
ENST00000425570.7
ENST00000595830.5
CDS CCA 72 bp TCTCTTCTTTGCAGCCAGATGATGCCTGCAGACAAATaGGACTGTGGTAACATCACCTCCTCGCCGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SLLCSQMMPADK*DCGNITSSPPS
Trigger: AGAGGGCGGCGAGGAGGTGATGTTACCACAGTCCCATTTGTCTGCAGGCATCATCTGGCTGCAAAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595830.5
CDS CCA 72 bp TGCAGTCCCAAGTCATTCTATGAAGGCCTTCTTGCATaGCTCCACATCCCCACAGAACCAGGTGGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: CSPKSFYEGLLA*LHIPTEPGGAL
Trigger: TAAAGCCCCACCTGGTTCTGTGGGGATGTGGAGCCATGCAAGAAGGCCTTCATAGAATGACTTGGGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425570.7
ENST00000595569.1