Pregenerated sensors for ZNF417 (Homo sapiens)
Ensembl gene IDs: ENSG00000173480Ensembl transcript IDs: ENST00000594396.1, ENST00000597515.5, ENST00000598526.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TACAACAAAGACATTCCCCTTTCTATATTACTCATATaGGAGCACATACTAACCTCCCTGGTCCTTTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: YNKDIPLSILLI*EHILTSLVLLT Trigger: AGTTAAAAGGACCAGGGAGGTTAGTATGTGCTCTCATATGAGTAATATAGAAAGGGGAATGTCTTTGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS-3UTR CCA 90 bp | ACAACAAGCAGTACAACAAAGACATTCCCCTTTCTATATTACTCATATGAGAGCAAAGGGCGGATGCACTaGTTTCTGCAGCTTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTSSTTKTFPFLYYSYESKGRMH*FLQLLP Trigger: CGGCAAAAGCTGCAGAAACCAGTGCATCCGCCCTTT...GCTCTCATATGAGTAATATAGAAAGGGGAATGTCTTTGTTGTACTGCTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS-3UTR CCA 90 bp | ACAAGCAGTACAACAAAGACATTCCCCTTTCTATATTACTCATATGAGAGCACAGCAGACCCTCCAACATaGGGACAAATCAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSTTKTFPFLYYSYESTADPPT*GQIRKL Trigger: CAGTTTCCTGATTTGTCCCCATGTTGGAGGGTCTGC...TGTGCTCTCATATGAGTAATATAGAAAGGGGAATGTCTTTGTTGTACTGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS-3UTR CCA 90 bp | ACAAGCAGTACAACAAAGACATTCCCCTTTCTATATTACTCATATGAGAGCACAGACAAATCAGGAAACTaGCACAGATGCAGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSTTKTFPFLYYSYESTDKSGN*HRCRGQ Trigger: TTGTCCTCTGCATCTGTGCCAGTTTCCTGATTTGTC...TGTGCTCTCATATGAGTAATATAGAAAGGGGAATGTCTTTGTTGTACTGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS CCA 90 bp | GGCTTATCCAGGCAGACCCTCCAACATGGGGACAAATCAGGAAACTaGCACAGATGCAGAGGACAATCCAGCGAGGATATGAGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSRQTLQHGDKSGN*HRCRGQSSEDMRAR Trigger: CCTGGCTCTCATATCCTCGCTGGATTGTCCTCTGCATCTGTGCCAGTTTCCTGATTTGTCCCCATGTTGGAGGGTCTGCCTGGATAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS CCA 90 bp | AGGCCTCAGAAAAAGATACGGCTTATCCAGGCAGACCCTCCAACATaGGGACAAATCAGGAAACTGGCACAGATGCAGAGGACAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPQKKIRLIQADPPT*GQIRKLAQMQRTIQ Trigger: CTGGATTGTCCTCTGCATCTGTGCCAGTTTCCTGATTTGTCCCCATGTTGGAGGGTCTGCCTGGATAAGCCGTATCTTTTTCTGAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS TCA 90 bp | TGCTTCCAACCTTTCAGCTGTCCTTGTTCATTCCTGGGTATAGGCTaGATTAACTTAGGGAAGGAATTCAGTTCATGGTTTCACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFQPFSCPCSFLGIG*INLGKEFSSWFHSE Trigger: CTCAGAGTGAAACCATGAACTGAATTCCTTCCCTAAGTTAATTCAGCCTATACCCAGGAATGAACAAGGACAGCTGAAAGGTTGGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597515.5 ENST00000598526.5 |
||
| CDS GCA 72 bp | TCAAAGGTCACAGTGCCCTGCTTACTGACTCCGTCTTaGTTCCAACCTTTCAGCTGTCCTTGTTCATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKVTVPCLLTPS*FQPFSCPCSFL Trigger: CAGGAATGAACAAGGACAGCTGAAAGGTTGGAAGCAAGACGGAGTCAGTAAGCAGGGCACTGTGACCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598526.5 |
||
| CDS GCA 72 bp | TCTTCAAAGGTCACAGTGCCCTTACTGACTCCGTCTTaGTTCCAACCTTTCAGCTGTCCTTGTTCATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSKVTVPLLTPS*FQPFSCPCSFL Trigger: CAGGAATGAACAAGGACAGCTGAAAGGTTGGAAGCAAGACGGAGTCAGTAAGGGCACTGTGACCTTTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597515.5 |
||
| CDS CCA 72 bp | CCTGGTCCTTTTAACTTAATCAAAGGGCGGATGCACTaGTTTCTGCAGCTTTTGCCGATGCACAAACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGPFNLIKGRMH*FLQLLPMHKRS Trigger: GGAACGTTTGTGCATCGGCAAAAGCTGCAGAAACCAGTGCATCCGCCCTTTGATTAAGTTAAAAGGACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594396.1 |
||
| CDS CAA 72 bp | TTCAAAGGTCACAGTGCCCTGCTTACTGACTCCGTCTaGCTTCCAACCTTTCAGCTGTCCTTGTTCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FKGHSALLTDSV*LPTFQLSLFIP Trigger: AGGAATGAACAAGGACAGCTGAAAGGTTGGAAGCAAGACGGAGTCAGTAAGCAGGGCACTGTGACCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598526.5 |
||
| CDS CAA 72 bp | ATCTTCAAAGGTCACAGTGCCCTTACTGACTCCGTCTaGCTTCCAACCTTTCAGCTGTCCTTGTTCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IFKGHSALTDSV*LPTFQLSLFIP Trigger: AGGAATGAACAAGGACAGCTGAAAGGTTGGAAGCAAGACGGAGTCAGTAAGGGCACTGTGACCTTTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597515.5 |
||
| CDS TCA 72 bp | CCTTTCAGCTGTCCTTGTTCATTCCTGGGTATAGGCTaGATTAACTTAGGGAAGGAATTCAGTTCATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFSCPCSFLGIG*INLGKEFSSWF Trigger: AAACCATGAACTGAATTCCTTCCCTAAGTTAATTCAGCCTATACCCAGGAATGAACAAGGACAGCTGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597515.5 ENST00000598526.5 |
||