RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF415 (Homo sapiens)

Ensembl gene IDs: ENSG00000170954

Ensembl transcript IDs: ENST00000243643.8, ENST00000243643.9, ENST00000421033.5, ENST00000500065.8, ENST00000594011.5, ENST00000595174.5, ENST00000595193.5, ENST00000595359.5, ENST00000595813.5, ENST00000596051.1, ENST00000596106.5, ENST00000597503.5, ENST00000597748.5, ENST00000597877.1, ENST00000598024.5, ENST00000598578.5, ENST00000600098.1, ENST00000600120.5, ENST00000600574.5, ENST00000601110.5, ENST00000601215.5, ENST00000601493.5, ENST00000602024.5, ENST00000602110.5

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAAATATACAAAGATGTTTACACATTTTGATGTCTAGTGAGTTGTaGGACCTAAATGAAGCCTCTGCCACACAGTTAGGTGTATATGAT +
Preference number: 1 (lower is better)
Translates to: QNIQRCLHILMSSEL*DLNEASATQLGVYD
Trigger: ATCATATACACCTAACTGTGTGGCAGAGGCTTCATTTAGGTCTCACAACTCACTAGACATCAAAATGTGTAAACATCTTTGTATATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000243643.8
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
3UTR-3UTR CCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR GCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCGAATGGAACATGATGTaGTGTGGCTTTTCAAGAATC +
Preference number: 2 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLEWNMM*CGFSRI
Trigger: GATTCTTGAAAAGCCACAGCACATCATGTTCCATTC...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR GCA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCGAATGGAACATGATGTaGTGTGGCTTTTCAAGAATC +
Preference number: 2 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGEWNMM*CGFSRI
Trigger: GATTCTTGAAAAGCCACAGCACATCATGTTCCATTC...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: FFWGRSHFVAISFIISPLVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
3UTR-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACACTTGCTACTCGTACTTaGCTTTCTATGGTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: CCGASSLITQLRDRSVFTLATRT*LSMVQG
Trigger: GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAG...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR CAA 90 bp TGGAATACTTCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCTGTTTTCACACCTTTGATC +
Preference number: 2 (lower is better)
Translates to: WNTSPGLPSCCGASS*ITQLRDRSVFTPLI
Trigger: GATCAAAGGTGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGAAGTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR GCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGAATGGAACATGATGTaGTGTGGCTTTTCAAGAATC +
Preference number: 2 (lower is better)
Translates to: FFWGRSHFVAISFIISPLEWNMM*CGFSRI
Trigger: GATTCTTGAAAAGCCACAGCACATCATGTTCCATTC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACACCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: CCGASSLITQLRDRSVFTPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: PHINPWMCYSFDPWLIASVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCCTCTTCTATCGCGTTaGTCTCTCCTACAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSPLLSR*SLLQVR
Trigger: TCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: FFWGRSHFVAISFIISPLKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATCATCATCTCTCCACTaGCAGTCAAAGTCGTGTATT +
Preference number: 2 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSSSLH*QSKSCI
Trigger: AATACACGACTTTGACTGTCAGTGGAGAGATGATGA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTAAGAATGAAATTCTCTaGTGCTGTGTAGGAGTGAAT +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSKNEIL*CCVGVN
Trigger: ATTCACTCCTACACAGCATCAGAGAATTTCATTCTT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGATGTGTTACAGTTTTaGTCCTTGGTTAATAGCTTC +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSDVLQF*SLVNSF
Trigger: GAAGCTATTAACCAAGGATCAAAACTGTAACACATC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 2 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAAGAATGAAATTCTCTaGTGCTGTGTAGGAGTGAAT +
Preference number: 2 (lower is better)
Translates to: PHINPWMCYSFDPWLIASKNEIL*CCVGVN
Trigger: ATTCACTCCTACACAGCATCAGAGAATTTCATTCTT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000243643.8
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
3UTR-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: PHINPWMCYSFDPWLIASDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000243643.8
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
3UTR-3UTR CAA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGAC +
Preference number: 3 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRCGASS*ITQLRD
Trigger: GTCTCGTAACTGTGTAATCAAGGAACTAGCACCACA...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGAC +
Preference number: 3 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSCGASS*ITQLRD
Trigger: GTCTCGTAACTGTGTAATCAAGGAACTAGCACCACA...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGAC +
Preference number: 3 (lower is better)
Translates to: FFWGRSHFVAISFIISPLCGASS*ITQLRD
Trigger: GTCTCGTAACTGTGTAATCAAGGAACTAGCACCACA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGGGGCCGTAGTCACTTaGTTGCAATTTCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSGAVVT*LQFLSS
Trigger: TGATGAAAGAAATTGCAACAAAGTGACTACGGCCCC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAACCTCTTCTATCGCGTaGGTCTCTCCTACAAGTAAG +
Preference number: 3 (lower is better)
Translates to: PHINPWMCYSFDPWLIASTSSIA*VSPTSK
Trigger: CTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGGGGCCGTAGTCACTTaGTTGCAATTTCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: PHINPWMCYSFDPWLIASGAVVT*LQFLSS
Trigger: TGATGAAAGAAATTGCAACAAAGTGACTACGGCCCC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
3UTR TCA 72 bp CAAAGATGTTTACACATTTTGATGTCTAGTGAGTTGTaGGACCTAAATGAAGCCTCTGCCACACAGTTAGGT +
Preference number: 3 (lower is better)
Translates to: QRCLHILMSSEL*DLNEASATQLG
Trigger: ACCTAACTGTGTGGCAGAGGCTTCATTTAGGTCTCACAACTCACTAGACATCAAAATGTGTAAACATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000243643.8
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
3UTR-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 3 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
3UTR-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 3 (lower is better)
Translates to: PHINPWMCYSFDPWLIASAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCATCGGCTGTGGAAATaGGAAACAGGGAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRAHRLWK*ETGSAG
Trigger: ACCTGCGCTCCCTGTTTCCCATTTCCACAGCCGATG...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600120.5
CDS-3UTR CCA 90 bp TCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCGGACGCATGCTTGGCTaGAGCAGAGGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRISALCLDKKRGYHRWIGRMLG*SRGSEE
Trigger: CTCCTCGCTCCCTCTGCTCCAGCCAAGCATGCGTCC...GATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAAGGCACGGGTCAATGTaGGCAAACGCGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVRHGSM*ANASGR
Trigger: CCTGCCTGACGCGTTTGCTCACATTGACCCGTGCCT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595813.5
CDS-3UTR CCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTGTCTTTGGAAGTCAATaGCTCGACGCCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRAVFGSQ*LDAVTF
Trigger: GAAGGTGACGGCGTCGAGCCATTGACTTCCAAAGAC...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598024.5
ENST00000598578.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGGACGCATGCTTGGCTaGAGCAGAGGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLGRMLG*SRGSEE
Trigger: CTCCTCGCTCCCTCTGCTCCAGCCAAGCATGCGTCC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000597748.5
ENST00000601215.5
CDS-3UTR GCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACCGAGATTGCACCATTaGACTCCAGCCCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVPRLHH*TPAQGD
Trigger: GTCTCCCTGGGCTGGAGTGCAATGGTGCAATCTCGG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR GCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGCAGTGAGCCGAGATTaGACCATTGCACTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVAVSRD*TIALQP
Trigger: GGGCTGGAGTGCAATGGTGCAATCTCGGCTCACTGC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTAGAGGCTATCACAGATaGATCCAGGGAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRARGYHR*IQGDQV
Trigger: AACCTGGTCTCCCTGGATCCATCTGTGATAGCCTCT...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGTCACAGGGTCAGGGTaGGACGGAATCTCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVVTGSG*DGISVE
Trigger: CTCTACTGAGATTCCGTCTCACCCTGACCCTGTGAC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595813.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCACGATGGCCACGTCCCTaGATGTCAACCCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPRWPRP*MSTRLH
Trigger: ATGGAGACGGGTTGACATTCAGGGACGTGGCCATCG...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595813.5
CDS-3UTR GCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGCCGAGATTGCACCATTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRPRLHH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAATGGTGCAATCTCGG...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598024.5
CDS-3UTR GCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAAACAGGAAGGACGCATaGTTGGCTGGAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVNRKDA*LAGAEG
Trigger: TCCCTCTGCTCCAGCCAAGCATGCGTCCTTCCTGTT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGCAGTGAGCCGAGATTaGACCATTGCACTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPAVSRD*TIALQP
Trigger: GGGCTGGAGTGCAATGGTGCAATCTCGGCTCACTGC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCGTCTTTGGAAGTCAATaGCTCGACGCCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSVFGSQ*LDAVTF
Trigger: GAAGGTGACGGCGTCGAGCCATTGACTTCCAAAGAC...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598024.5
ENST00000598578.5
CDS-3UTR CCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGGGCCGTATCGACCCTaGACATCGGCTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPGPYRP*TSAVEM
Trigger: CATTTCCACAGCCGATGTCCAGGGTCGATACGGCCC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597503.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGGACGCATGCTTGGCTaGAGCAGAGGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSGRMLG*SRGSEE
Trigger: CTCCTCGCTCCCTCTGCTCCAGCCAAGCATGCGTCC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTTCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRASLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGACACAGGCAGGAGATaGGGTCAGAGAGGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSDTGRR*GQRGRS
Trigger: CGAGCGACCTCTCTGACCTCATCTCCTGCCTGTGTC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594011.5
CDS-3UTR GCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCAGAATCTCAGCCCTTTaGTTGGATAAGAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLRISAL*LDKKRG
Trigger: GCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTAGAATCTCAGCCCTTTaGTTGGATAAGAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRARISAL*LDKKRG
Trigger: GCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCT...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAAACAGGAAGGACGCATaGTTGGCTGGAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPNRKDA*LAGAEG
Trigger: TCCCTCTGCTCCAGCCAAGCATGCGTCCTTCCTGTT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR GCA 90 bp GCTTTTCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATAACAGGAAGGACGCATaGTTGGCTGGAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AFQESQPFAWIRREAITDNRKDA*LAGAEG
Trigger: TCCCTCTGCTCCAGCCAAGCATGCGTCCTTCCTGTT...ATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR GCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAACAGGAAGGACGCATaGTTGGCTGGAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLNRKDA*LAGAEG
Trigger: TCCCTCTGCTCCAGCCAAGCATGCGTCCTTCCTGTT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000597748.5
ENST00000601215.5
CDS-3UTR CCA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCCTTGCTACTCGTACTTaGCTTTCTATGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSLATRT*LSMVQG
Trigger: GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAG...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGCTTGCTACTCGTACTTaGCTTTCTATGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRLATRT*LSMVQG
Trigger: GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAG...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCCCATTCCCACCCTTTTaGTTTTCTTGCTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLPFPPF*FSCYSY
Trigger: GTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGG...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGAGGCTATCACAGATaGATCCAGGGAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSRGYHR*IQGDQV
Trigger: AACCTGGTCTCCCTGGATCCATCTGTGATAGCCTCT...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGAGAGGCTATCACAGATaGATCCAGGGAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRRGYHR*IQGDQV
Trigger: AACCTGGTCTCCCTGGATCCATCTGTGATAGCCTCT...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCTCAGCCCTTTGCTTaGATAAGAAGAGAGGCTATC +
Preference number: 4 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGSQPFA*IRREAI
Trigger: GATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGA...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTTCTCAGCCCTTTGCTTaGATAAGAAGAGAGGCTATC +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRASQPFA*IRREAI
Trigger: GATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGA...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp ATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCCAGGGAAGTAAAAGCCATTCCTaGCTCCTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ISALCLDKKRGYHRWIQGSKSHS*LLCSPL
Trigger: AAGAGGAGAGCAAAGGAGTCAGGAATGGCTTTTACT...TCCCTGGATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR TCA 90 bp ATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCCAGGGATCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ISALCLDKKRGYHRWIQGSLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...TCCCTGGATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR TCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTTCATCATCTCTCCACTaGCAGTCAAAGTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRASSSLH*QSKSCI
Trigger: AATACACGACTTTGACTGTCAGTGGAGAGATGATGA...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAGGCACGGGTCAATGTaGGCAAACGCGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASRHGSM*ANASGR
Trigger: CCTGCCTGACGCGTTTGCTCACATTGACCCGTGCCT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500065.8
CDS-3UTR TCA 90 bp TCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCCTGAGAGGTCTGAGTTaGGTGAGAAGGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SRISALCLDKKRGYHRWILRGLS*VRRRRC
Trigger: ACATCTCCTCCTTCTCACTCAACTCAGACCTCTCAG...GATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR GCA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCCCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCCCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp ATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCCAGGGAAGAATCTCAGCCCTTTaGTTGGATAAGAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ISALCLDKKRGYHRWIQGRISAL*LDKKRG
Trigger: GCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCT...TCCCTGGATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR GCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACCGAGATTGCACCATTaGACTCCAGCCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVPRLHH*TPACFH
Trigger: GTGAAAACAGGCTGGAGTGCAATGGTGCAATCTCGG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGTCTTTGGAAGTCAATaGCTCGACGCCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLVFGSQ*LDAVTF
Trigger: GAAGGTGACGGCGTCGAGCCATTGACTTCCAAAGAC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595193.5
ENST00000598578.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTGTGCCAGGAGTCTTTaGAAGTCAATGGCTCGACGC +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLCARSL*KSMARR
Trigger: GCGTCGAGCCATTGACTTCCAAAGACTCCTGGCACA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595193.5
ENST00000598578.5
CDS-3UTR CCA 90 bp TCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCAGAGGCTATCACAGATaGATCCAGGGAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SRISALCLDKKRGYHRWIRGYHR*IQGDQV
Trigger: AACCTGGTCTCCCTGGATCCATCTGTGATAGCCTCT...GATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR TCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGTAAAAGCCATTCCTaGCTCCTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSSKSHS*LLCSPL
Trigger: AAGAGGAGAGCAAAGGAGTCAGGAATGGCTTTTACT...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGGCATGAGTTGCGACTaGAACTTCTGTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRGMSCD*NFCHIH
Trigger: ATGAATGTGACAGAAGTTTCAGTCGCAACTCATGCC...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACGATGGCCACGTCCCTaGATGTCAACCCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASRWPRP*MSTRLH
Trigger: ATGGAGACGGGTTGACATTCAGGGACGTGGCCATCG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500065.8
CDS-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCACCGAGATTGCACCATTaGACTCCAGCCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPPRLHH*TPACFH
Trigger: GTGAAAACAGGCTGGAGTGCAATGGTGCAATCTCGG...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR GCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACCGAGATTGCACCATTaGACTCCAGCCCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASPRLHH*TPAQGD
Trigger: GTCTCCCTGGGCTGGAGTGCAATGGTGCAATCTCGG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000597748.5
CDS-3UTR GCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGCAGTGAGCCGAGATTaGACCATTGCACTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASAVSRD*TIALQP
Trigger: GGGCTGGAGTGCAATGGTGCAATCTCGGCTCACTGC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCATCGGCTGTGGAAATaGGAAACAGGGAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSHRLWK*ETGSAG
Trigger: ACCTGCGCTCCCTGTTTCCCATTTCCACAGCCGATG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGGGCCGTATCGACCCTaGACATCGGCTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASGPYRP*TSAVEM
Trigger: CATTTCCACAGCCGATGTCCAGGGTCGATACGGCCC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTTTGGAAGTCAATGCTaGGGTGGAGTGTACGGGGAT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLFGSQC*GGVYGD
Trigger: ATCCCCGTACACTCCACCCCAGCATTGACTTCCAAA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGCATTGTCTCCCACCTaGGGTGGAGTGTACGGGGAT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASALSPT*GGVYGD
Trigger: ATCCCCGTACACTCCACCCCAGGTGGGAGACAATGC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500065.8
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCACTTGCTACTCGTACTTaGCTTTCTATGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPLATRT*LSMVQG
Trigger: GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAG...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCTCTCAGCCCTTTGCTTaGATAAGAAGAGAGGCTATC +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSSQPFA*IRREAI
Trigger: GATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGA...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
3UTR CAA 72 bp TCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SPGLPSCCGASS*ITQLRDRSVIP
Trigger: TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTATCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVSLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGGCATGAGTTGCGACTaGAACTTCTGTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVGMSCD*NFCHIH
Trigger: ATGAATGTGACAGAAGTTTCAGTCGCAACTCATGCC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGTCACAGGGTCAGGGTaGGACGGAATCTCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASVTGSG*DGISVE
Trigger: CTCTACTGAGATTCCGTCTCACCCTGACCCTGTGAC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500065.8
CDS-3UTR TCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRAKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGCCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGTGGAATACTTCTCCTaGGTTACCTTCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPVEYFS*VTFLLW
Trigger: CCACAACAGGAAGGTAACCCAGGAGAAGTATTCCAC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRASKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACCTCTTCTATCGCGTTaGTCTCTCCTACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVPLLSR*SLLQVR
Trigger: TCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACATCGGCTGTGGAAATaGGAAACAGGGAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASHRLWK*ETGSAG
Trigger: ACCTGCGCTCCCTGTTTCCCATTTCCACAGCCGATG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCTCTCAGCCCTTTGCTTaGATAAGAAGAGAGGCTATC +
Preference number: 4 (lower is better)
Translates to: SRISALCLDKKRGYHRWISQPFA*IRREAI
Trigger: GATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGA...GATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
3UTR CAA 72 bp TCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCTGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SPGLPSCCGASS*ITQLRDRSVFT
Trigger: TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAGTAAAAGCCATTCCTaGCTCCTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSKSHS*LLCSPL
Trigger: AAGAGGAGAGCAAAGGAGTCAGGAATGGCTTTTACT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTATCATCATCTCTCCACTaGCAGTCAAAGTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVSSSLH*QSKSCI
Trigger: AATACACGACTTTGACTGTCAGTGGAGAGATGATGA...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGGCATGAGTTGCGACTaGAACTTCTGTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLGMSCD*NFCHIH
Trigger: ATGAATGTGACAGAAGTTTCAGTCGCAACTCATGCC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGTTACGAGACAGATCTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLVTRQI*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGATCTGTCTCGTAAC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601215.5
CDS-3UTR GCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGTCTTTGGAAGTCAATaGCTCGACGCCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASVFGSQ*LDAVTF
Trigger: GAAGGTGACGGCGTCGAGCCATTGACTTCCAAAGAC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595193.5
ENST00000601493.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGCCTCTTCTATCGCGTTaGTCTCTCCTACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLPLLSR*SLLQVR
Trigger: TCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGG...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTTTTGGAAGTCAATGCTaGGGTGGAGTGTACGGGGAT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSFGSQC*GGVYGD
Trigger: ATCCCCGTACACTCCACCCCAGCATTGACTTCCAAA...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCTTGCTACTCGTACTTaGCTTTCTATGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSLATRT*LSMVQG
Trigger: GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCACCATTCCCACCCTTTTaGTTTTCTTGCTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPPFPPF*FSCYSY
Trigger: GTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGG...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTCATCATCTCTCCACTaGCAGTCAAAGTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSSSLH*QSKSCI
Trigger: AATACACGACTTTGACTGTCAGTGGAGAGATGATGA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGATGGTTGGTAAGTGTTaGCCTCACACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLMVGKC*PHTKGF
Trigger: AAAGCCTTTAGTGTGAGGTCAACACTTACCAACCAT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAATGGTTGGTAAGTGTTaGCCTCACACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPMVGKC*PHTKGF
Trigger: AAAGCCTTTAGTGTGAGGTCAACACTTACCAACCAT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATGACTCGCAAGGTGTaGATTGTAACTGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVMTRKV*IVTENL
Trigger: AAGGTTTTCAGTTACAATTCACACCTTGCGAGTCAT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGAAGAATGAAATTCTCTaGTGCTGTGTAGGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRKNEIL*CCVGVN
Trigger: ATTCACTCCTACACAGCATCAGAGAATTTCATTCTT...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600120.5
CDS-3UTR TCA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCACCCTTTTGGTTTTCTTaGTACTCGTACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPPFWFS*YSYLAF
Trigger: GAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGG...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CCA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACACCTCTTCTATCGCGTTaGTCTCTCCTACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTPLLSR*SLLQVR
Trigger: TCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGG...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATTTGGAAGTCAATGCTaGGGTGGAGTGTACGGGGAT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASFGSQC*GGVYGD
Trigger: ATCCCCGTACACTCCACCCCAGCATTGACTTCCAAA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421033.5
ENST00000597503.5
ENST00000600120.5
CDS-3UTR CCA 90 bp GCTTTTCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGTCATTGAGGTTTTCTaGTCTAGTCCCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: AFQESQPFAWIRREAITDVIEVF*SSPLSL
Trigger: CAGAGATAAGGGACTAGACCAGAAAACCTCAATGAC...ATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGTCATTGAGGTTTTCTaGTCTAGTCCCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLVIEVF*SSPLSL
Trigger: CAGAGATAAGGGACTAGACCAGAAAACCTCAATGAC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601215.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTAGTAAAAGCCATTCCTaGCTCCTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSSKSHS*LLCSPL
Trigger: AAGAGGAGAGCAAAGGAGTCAGGAATGGCTTTTACT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTTCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSSLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGGCATGAGTTGCGACTaGAACTTCTGTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSGMSCD*NFCHIH
Trigger: ATGAATGTGACAGAAGTTTCAGTCGCAACTCATGCC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAATGGTTGGTAAGTGTTaGCCTCACACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTMVGKC*PHTKGF
Trigger: AAAGCCTTTAGTGTGAGGTCAACACTTACCAACCAT...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGATGACTCGCAAGGTGTaGATTGTAACTGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLMTRKV*IVTENL
Trigger: AAGGTTTTCAGTTACAATTCACACCTTGCGAGTCAT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAAAGAATGAAATTCTCTaGTGCTGTGTAGGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVKNEIL*CCVGVN
Trigger: ATTCACTCCTACACAGCATCAGAGAATTTCATTCTT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGATGTGTTACAGTTTTaGTCCTTGGTTAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVDVLQF*SLVNSF
Trigger: GAAGCTATTAACCAAGGATCAAAACTGTAACACATC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCCATTCCCACCCTTTTaGTTTTCTTGCTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSPFPPF*FSCYSY
Trigger: GTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAGTAAAAGCCATTCCTaGCTCCTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSKSHS*LLCSPL
Trigger: AAGAGGAGAGCAAAGGAGTCAGGAATGGCTTTTACT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421033.5
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATCCCTGAATGTCAACTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSLNVN*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGTTGACATTCAGGGA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421033.5
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTTCATCATCTCTCCACTaGCAGTCAAAGTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSSSSLH*QSKSCI
Trigger: AATACACGACTTTGACTGTCAGTGGAGAGATGATGA...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAACGTACAGTCATGTGTaGGCCATGATTCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASTYSHV*AMIQGF
Trigger: AAAGCCTTGAATCATGGCTCACACATGACTGTACGT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGGCATGAGTTGCGACTaGAACTTCTGTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASGMSCD*NFCHIH
Trigger: ATGAATGTGACAGAAGTTTCAGTCGCAACTCATGCC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTATGGTTGGTAAGTGTTaGCCTCACACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSMVGKC*PHTKGF
Trigger: AAAGCCTTTAGTGTGAGGTCAACACTTACCAACCAT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAATGACTCGCAAGGTGTaGATTGTAACTGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTMTRKV*IVTENL
Trigger: AAGGTTTTCAGTTACAATTCACACCTTGCGAGTCAT...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCATTAGTATGGATAATTTaGTGTCTGAAGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPLVWII*CLKRFG
Trigger: CCCAAACCTCTTCAGACATCAAATTATCCATACTAA...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTTAGTATGGATAATTTaGTGTCTGAAGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLLVWII*CLKRFG
Trigger: CCCAAACCTCTTCAGACATCAAATTATCCATACTAA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAAAGAATGAAATTCTCTaGTGCTGTGTAGGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPKNEIL*CCVGVN
Trigger: ATTCACTCCTACACAGCATCAGAGAATTTCATTCTT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGATGTTTACACATTTTaGTGTCTAGTGAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLDVYTF*CLVSCE
Trigger: CTCACAACTCACTAGACATCAAAATGTGTAAACATC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR TCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGATGTGTTACAGTTTTaGTCCTTGGTTAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLDVLQF*SLVNSF
Trigger: GAAGCTATTAACCAAGGATCAAAACTGTAACACATC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGTTACGAGACAGATCTaGGTAAAAGCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASVTRQI*VKAIPD
Trigger: GTCAGGAATGGCTTTTACTCAGATCTGTCTCGTAAC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601493.5
CDS-3UTR GCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAGAATGGAACATGATGTaGTGTGGCTTTTCAAGAATC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTEWNMM*CGFSRI
Trigger: GATTCTTGAAAAGCCACAGCACATCATGTTCCATTC...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVIPSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACCTCTTCTATCGCGTTaGTCTCTCCTACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASPLLSR*SLLQVR
Trigger: TCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAACTGCTGCAGTTCATaGGGATGTGGTAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASNCCSS*GCGRKL
Trigger: AAGCTTTCTACCACATCCCCATGAACTGCAGCAGTT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CCA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACCTCACATAAATCCTTaGATGTGTTACAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: PSCCGASSLITQLRDRSVPHINP*MCYSFD
Trigger: ATCAAAACTGTAACACATCCAAGGATTTATGTGAGG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACCATTCCCACCCTTTTaGTTTTCTTGCTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASPFPPF*FSCYSY
Trigger: GTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAATGGTTGGTAAGTGTTaGCCTCACACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASMVGKC*PHTKGF
Trigger: AAAGCCTTTAGTGTGAGGTCAACACTTACCAACCAT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAGATGTGTTACAGTTTTaGTCCTTGGTTAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTDVLQF*SLVNSF
Trigger: GAAGCTATTAACCAAGGATCAAAACTGTAACACATC...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600120.5
CDS-3UTR TCA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAAAAATGAATGGAACATaGTGTGCTGTGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CCGASSLITQLRDRSVFTKMNGT*CAVAFQ
Trigger: TTGAAAAGCCACAGCACATCATGTTCCATTCATTTT...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CCA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGCCTCACATAAATCCTTaGATGTGTTACAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: FFWGRSHFVAISFIISPLPHINP*MCYSFD
Trigger: ATCAAAACTGTAACACATCCAAGGATTTATGTGAGG...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAATGACTCGCAAGGTGTaGATTGTAACTGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASMTRKV*IVTENL
Trigger: AAGGTTTTCAGTTACAATTCACACCTTGCGAGTCAT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTTTAGTATGGATAATTTaGTGTCTGAAGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSLVWII*CLKRFG
Trigger: CCCAAACCTCTTCAGACATCAAATTATCCATACTAA...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATTAGTATGGATAATTTaGTGTCTGAAGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASLVWII*CLKRFG
Trigger: CCCAAACCTCTTCAGACATCAAATTATCCATACTAA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR TCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGATGTGTTACAGTTTTaGTCCTTGGTTAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASDVLQF*SLVNSF
Trigger: GAAGCTATTAACCAAGGATCAAAACTGTAACACATC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAGTAAGATTTTCTTTTaGGGCCGTAGTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSKIFF*GRSHFV
Trigger: AACAAAGTGACTACGGCCCCAAAAGAAAATCTTACT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CCA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCCTCACATAAATCCTTaGATGTGTTACAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSPHINP*MCYSFD
Trigger: ATCAAAACTGTAACACATCCAAGGATTTATGTGAGG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
CDS-3UTR CCA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACCTCACATAAATCCTTaGATGTGTTACAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: PHINPWMCYSFDPWLIASPHINP*MCYSFD
Trigger: ATCAAAACTGTAACACATCCAAGGATTTATGTGAGG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS CCA 90 bp AGGGAGCGAGGAGGACACAGGCAGGAGATGAGGTCAGAGAGGTCCTaGGAGGGCAGATCAGGCAGGGCAGATGCTGTCAAACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: RERGGHRQEMRSERS*EGRSGRADAVKHFS
Trigger: AGAAAAATGTTTGACAGCATCTGCCCTGCCTGATCTGCCCTCCCAGGACCTCTCTGACCTCATCTCCTGCCTGTGTCCTCCTCGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596051.1
CDS-3UTR CAA 90 bp GCTTTTCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGCCCACGTGAAGGCCTaGAGGCAGGAGCAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: AFQESQPFAWIRREAITDAHVKA*RQEQAR
Trigger: CCGAGCTTGCTCCTGCCTCAAGGCCTTCACGTGGGC...ATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGCCCACGTGAAGGCCTaGAGGCAGGAGCAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLAHVKA*RQEQAR
Trigger: CCGAGCTTGCTCCTGCCTCAAGGCCTTCACGTGGGC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000597748.5
ENST00000601215.5
CDS-3UTR CAA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCATGTGCCAGGAGTCTTaGGAAGTCAATGGCTCGACG +
Preference number: 5 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGMCQES*EVNGST
Trigger: CGTCGAGCCATTGACTTCCAAAGACTCCTGGCACAT...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598024.5
ENST00000598578.5
CDS-3UTR CAA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTTCTTGCTACTCGTACTaGGCTTTCTATGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRASCYSY*AFYGPG
Trigger: CCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGA...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCTTGCTACTCGTACTaGGCTTTCTATGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGSCYSY*AFYGPG
Trigger: CCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGA...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACATTGTCTCCCACCTTaGCTCGACGCCGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVHCLPP*LDAVTF
Trigger: GAAGGTGACGGCGTCGAGCAAAGGTGGGAGACAATG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595813.5
CDS-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTGCCCACGTGAAGGCCTaGAGGCAGGAGCAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSAHVKA*RQEQAR
Trigger: CCGAGCTTGCTCCTGCCTCAAGGCCTTCACGTGGGC...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGCCGAGATTGCACCATaGCACTCCAGCCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPAEIAP*HSSPGR
Trigger: TCTCCCTGGGCTGGAGTGCAATGGTGCAATCTCGGC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGATGTGCCAGGAGTCTTaGGAAGTCAATGGCTCGACG +
Preference number: 5 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRMCQES*EVNGST
Trigger: CGTCGAGCCATTGACTTCCAAAGACTCCTGGCACAT...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598024.5
ENST00000598578.5
CDS-3UTR CAA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCACCTCTTCTATCGCGTaGGTCTCTCCTACAAGTAAG +
Preference number: 5 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLTSSIA*VSPTSK
Trigger: CTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCAGTGCAAGGCATGAGTaGCGACTGAAACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGSARHE*RLKLLS
Trigger: TGACAGAAGTTTCAGTCGCAACTCATGCCTTGCACT...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTATGCAGCTCCAAGGCATaGTCTCCCACCTTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVCSSKA*SPTFAR
Trigger: TCGAGCAAAGGTGGGAGACAATGCCTTGGAGCTGCA...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595813.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATGTGCCAGGAGTCTTaGGAAGTCAATGGCTCGACG +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVMCQES*EVNGST
Trigger: CGTCGAGCCATTGACTTCCAAAGACTCCTGGCACAT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595193.5
CDS-3UTR CAA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCATCTCAGCCCTTTGCTaGGATAAGAAGAGAGGCTAT +
Preference number: 5 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLISALC*DKKRGY
Trigger: ATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTATCTCAGCCCTTTGCTaGGATAAGAAGAGAGGCTAT +
Preference number: 5 (lower is better)
Translates to: PTLLVFLLLVLGFLWSRAISALC*DKKRGY
Trigger: ATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT...AGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGCCGAGATTGCACCATaGCACTCCAGCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVAEIAP*HSSLFS
Trigger: TGAAAACAGGCTGGAGTGCAATGGTGCAATCTCGGC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS TCA 90 bp TCTTATATATTTGAAAGTCCCACGAAATACATGGTCCCGCTCATCTaGGATGTGCAGGACTGCAGGGGAATGCATCTAGGGAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SYIFESPTKYMVPLI*DVQDCRGMHLGSQE
Trigger: TTCCTGACTCCCTAGATGCATTCCCCTGCAGTCCTGCACATCTCAGATGAGCGGGACCATGTATTTCGTGGGACTTTCAAATATATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596051.1
ENST00000602110.5
CDS-3UTR CAA 90 bp TCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCACCCTTTTGGTTTTCTaGCTACTCGTACTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SHPFGFLATRTWLSMVQGTLLVF*LLVLGF
Trigger: AAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGT...GCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp ATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATGGATCCAGGGAATCTCAGCCCTTTGCTaGGATAAGAAGAGAGGCTAT +
Preference number: 5 (lower is better)
Translates to: ISALCLDKKRGYHRWIQGISALC*DKKRGY
Trigger: ATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT...TCCCTGGATCCATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATGTGCCAGGAGTCTTaGGAAGTCAATGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVMCQES*EVNAAA
Trigger: AGCTGCAGCATTGACTTCCAAAGACTCCTGGCACAT...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGCCGAGATTGCACCATaGCACTCCAGCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPAEIAP*HSSLFS
Trigger: TGAAAACAGGCTGGAGTGCAATGGTGCAATCTCGGC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAGCCGAGATTGCACCATaGCACTCCAGCCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASAEIAP*HSSPGR
Trigger: TCTCCCTGGGCTGGAGTGCAATGGTGCAATCTCGGC...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp CCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGGCTCGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: PPFWFSCYSYLAFYGPGLAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...GAGCCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCGGGGCCGTAGTCACTTaGTTGCAATTTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSGAVVT*LQFLSS
Trigger: TGATGAAAGAAATTGCAACAAAGTGACTACGGCCCC...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGTCTTGCTACTCGTACTaGGCTTTCTATGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSCYSY*AFYGPG
Trigger: CCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGA...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAATGTGCCAGGAGTCTTaGGAAGTCAATGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPMCQES*EVNAAA
Trigger: AGCTGCAGCATTGACTTCCAAAGACTCCTGGCACAT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000597748.5
CDS-3UTR CAA 90 bp GCTTTTCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATATGTGCCAGGAGTCTTaGGAAGTCAATGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: AFQESQPFAWIRREAITDMCQES*EVNAAA
Trigger: AGCTGCAGCATTGACTTCCAAAGACTCCTGGCACAT...ATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGATGTGCCAGGAGTCTTaGGAAGTCAATGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLMCQES*EVNAAA
Trigger: AGCTGCAGCATTGACTTCCAAAGACTCCTGGCACAT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000597748.5
ENST00000601215.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGACCTCTTCTATCGCGTaGGTCTCTCCTACAAGTAAG +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLTSSIA*VSPTSK
Trigger: CTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAAGTGCAAGGCATGAGTaGCGACTGAAACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPSARHE*RLKLLS
Trigger: TGACAGAAGTTTCAGTCGCAACTCATGCCTTGCACT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAGTGCAAGGCATGAGTaGCGACTGAAACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLSARHE*RLKLLS
Trigger: TGACAGAAGTTTCAGTCGCAACTCATGCCTTGCACT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGACCCTTTTGGTTTTCTaGCTACTCGTACTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRTLLVF*LLVLGF
Trigger: AAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGT...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000598024.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp GCTTTTCAAGAATCTCAGCCCTTTGCTTGGATAAGAAGAGAGGCTATCACAGATAGGTCAGAGAGGTCATaGAGGTTTTCTGGTCTAGTC +
Preference number: 5 (lower is better)
Translates to: AFQESQPFAWIRREAITDRSERS*RFSGLV
Trigger: GACTAGACCAGAAAACCTCAATGACCTCTCTGACCT...ATCTGTGATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGATTCTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597877.1
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGAGGTCAGAGAGGTCATaGAGGTTTTCTGGTCTAGTC +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLRSERS*RFSGLV
Trigger: GACTAGACCAGAAAACCTCAATGACCTCTCTGACCT...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601215.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAATGTGCCAGGAGTCTTaGGAAGTCAATGGCTCGACG +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASMCQES*EVNGST
Trigger: CGTCGAGCCATTGACTTCCAAAGACTCCTGGCACAT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595193.5
ENST00000601493.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAGGGGCCGTAGTCACTTaGTTGCAATTTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPGAVVT*LQFLSS
Trigger: TGATGAAAGAAATTGCAACAAAGTGACTACGGCCCC...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGGGGCCGTAGTCACTTaGTTGCAATTTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLGAVVT*LQFLSS
Trigger: TGATGAAAGAAATTGCAACAAAGTGACTACGGCCCC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAAGTGCAAGGCATGAGTaGCGACTGAAACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVFTSARHE*RLKLLS
Trigger: TGACAGAAGTTTCAGTCGCAACTCATGCCTTGCACT...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTACCTCTTCTATCGCGTaGGTCTCTCCTACAAGTAAG +
Preference number: 5 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSTSSIA*VSPTSK
Trigger: CTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TCCATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCCTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: SIPTLLVFLLLVLGFLWSLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...GGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp ATTCCCACCCTTTTGGTTTTCTTGCTACTCGTACTTGGCTTTCTATGGTCCAGGCTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: IPTLLVFLLLVLGFLWSRLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...CCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGTGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATCTTGCTACTCGTACTaGGCTTTCTATGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSCYSY*AFYGPG
Trigger: CCCTGGACCATAGAAAGCCAAGTACGAGTAGCAAGA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTAATCCCAACCCTTTTGGTTTTCTaGCTACTCGTACTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVIPTLLVF*LLVLGF
Trigger: AAAGCCAAGTACGAGTAGCAAGAAAACCAAAAGGGT...TGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594011.5
ENST00000595193.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
ENST00000601215.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCAAGTGCAAGGCATGAGTaGCGACTGAAACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASSARHE*RLKLLS
Trigger: TGACAGAAGTTTCAGTCGCAACTCATGCCTTGCACT...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CAA 90 bp CCTTCCTGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTACTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PSCCGASSLITQLRDRSVLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...TACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
CDS-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTATCTCAGCCCTTTGCTaGGATAAGAAGAGAGGCTAT +
Preference number: 5 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSISALC*DKKRGY
Trigger: ATAGCCTCTCTTCTTATCCAAGCAAAGGGCTGAGAT...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCATGTGGTGCTAGTTCCTaGATTACACAGTTACGAGAC +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASCGASS*ITQLRD
Trigger: GTCTCGTAACTGTGTAATCAAGGAACTAGCACCACA...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS-3UTR CAA 90 bp TGTTGTGGTGCTAGTTCCTTGATTACACAGTTACGAGACAGATCTGTTTTCACAGCCGTAGTCACTTTGTaGCAATTTCTTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: CCGASSLITQLRDRSVFTAVVTL*QFLSSS
Trigger: AGATGATGAAAGAAATTGCAACAAAGTGACTACGGC...TGTGAAAACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TTCTTTTGGGGCCGTAGTCACTTTGTTGCAATTTCTTTCATCATCTCTCCACTGCTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: FFWGRSHFVAISFIISPLLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...CAGTGGAGAGATGATGAAAGAAATTGCAACAAAGTGACTACGGCCCCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp TTGTTTCCTATACCTCTTCTATCGCGTTGGTCTCTCCTACAAGTAAGATTTTCTCTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LFPIPLLSRWSLLQVRFSLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...AGAAAATCTTACTTGTAGGAGAGACCAACGCGATAGAAGAGGTATAGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000598578.5
ENST00000600120.5
CDS-3UTR CAA 90 bp CCTCACATAAATCCTTGGATGTGTTACAGTTTTGATCCTTGGTTAATAGCTTCACTTAGTATGGATAATTaGATGTCTGAAGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PHINPWMCYSFDPWLIASLSMDN*MSEEVW
Trigger: CCAAACCTCTTCAGACATCAAATTATCCATACTAAG...TGAAGCTATTAACCAAGGATCAAAACTGTAACACATCCAAGGATTTATGTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000594011.5
ENST00000595193.5
ENST00000597503.5
ENST00000597748.5
ENST00000600120.5
ENST00000601493.5
CDS CCA 72 bp CAGGGGAATGCATCTAGGGAGTCAGGAAGTCACTTTTaGACACGCTCGACGCCGTCACCTTCACCCAACGCG +
Preference number: 6 (lower is better)
Translates to: QGNASRESGSHF*TRSTPSPSPNA
Trigger: CGCGTTGGGTGAAGGTGACGGCGTCGAGCGTGTCCAAAAGTGACTTCCTGACTCCCTAGATGCATTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596051.1
ENST00000602110.5
CDS CCA 72 bp GATTTTAAGGGCCGTATCGACCCTGGACATCGGCTGTaGAAATGGGAAACAGGGAGCGCAGGTTTAATCTAC +
Preference number: 6 (lower is better)
Translates to: DFKGRIDPGHRL*KWETGSAGLIY
Trigger: GTAGATTAAACCTGCGCTCCCTGTTTCCCATTTCCACAGCCGATGTCCAGGGTCGATACGGCCCTTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421033.5
ENST00000500065.8
ENST00000595359.5
ENST00000596106.5
ENST00000597503.5
ENST00000600098.1
ENST00000600120.5
ENST00000600574.5
CDS CAA 72 bp TCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCCAGGGAGACC +
Preference number: 6 (lower is better)
Translates to: SPGLPSCCGASS*ITQLRDRSRET
Trigger: GGTCTCCCTGGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243643.9
ENST00000421033.5
ENST00000500065.8
ENST00000595174.5
ENST00000601110.5
CDS CAA 90 bp TGGAATACTTCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCCAGGGAGACCAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: WNTSPGLPSCCGASS*ITQLRDRSRETRFL
Trigger: CAGGAACCTGGTCTCCCTGGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGAAGTATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243643.9
ENST00000421033.5
ENST00000500065.8
ENST00000595174.5
ENST00000601110.5
CDS CAA 72 bp TCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCCCGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SPGLPSCCGASS*ITQLRDRSRLH
Trigger: ATGGAGACGGGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602024.5
CDS CAA 90 bp TGGAATACTTCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCCCGTCTCCATCCATGTCTG +
Preference number: 6 (lower is better)
Translates to: WNTSPGLPSCCGASS*ITQLRDRSRLHPCL
Trigger: CAGACATGGATGGAGACGGGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGAAGTATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602024.5
CDS CAA 90 bp TGGAATACTTCTCCTGGGTTACCTTCCTGTTGTGGTGCTAGTTCCTaGATTACACAGTTACGAGACAGATCTGTAATCCCAGCTACTCGG +
Preference number: 6 (lower is better)
Translates to: WNTSPGLPSCCGASS*ITQLRDRSVIPATR
Trigger: CCGAGTAGCTGGGATTACAGATCTGTCTCGTAACTGTGTAATCAAGGAACTAGCACCACAACAGGAAGGTAACCCAGGAGAAGTATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594011.5
ENST00000595193.5
ENST00000595813.5
ENST00000597503.5
ENST00000597748.5