RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF410 (Homo sapiens)

Ensembl gene IDs: ENSG00000119725

Ensembl transcript IDs: ENST00000324593.10, ENST00000334521.8, ENST00000398139.7, ENST00000412490.7, ENST00000442160.7, ENST00000540593.5, ENST00000541357.6, ENST00000554582.5, ENST00000554797.3, ENST00000555044.6, ENST00000555602.6, ENST00000555620.1, ENST00000555730.6, ENST00000556160.5, ENST00000556179.5, ENST00000556396.5, ENST00000556659.5, ENST00000556797.1, ENST00000557214.2, ENST00000557495.5, ENST00000557679.5, ENST00000615736.4, ENST00000639051.1

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTG +
Preference number: 1 (lower is better)
Translates to: SCARVAAIKLSWANS*TRRNHGMLLSVLSL
Trigger: CAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR GCA 90 bp GGGCCAACTCCTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAATCATTCCCTGAATCTTCTGCCTCAT +
Preference number: 1 (lower is better)
Translates to: GPTPEPGGTMECYCL*SHWRGNHSLNLLPH
Trigger: ATGAGGCAGAAGATTCAGGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR CCA 90 bp AGCAATCAAACTGTCATGGGCCAACTCCTGAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAAATCATTCCC +
Preference number: 1 (lower is better)
Translates to: SNQTVMGQLLNPEEP*NATVCALTGEEIIP
Trigger: GGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGACAGTTTGATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR GCA 90 bp TCAAACTGTCATGGGCCAACTCCTGAACCCGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCACTGGAGAGGAAATCATTCCCTGAAT +
Preference number: 1 (lower is better)
Translates to: SNCHGPTPEPGGTME*YCLCSHWRGNHSLN
Trigger: ATTCAGGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGACAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR CCA 90 bp CTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCACATCAGGCACTGAAGACAGGGAAC +
Preference number: 1 (lower is better)
Translates to: LQLRQKLHMIASLTA*SPGDVSHQALKTGN
Trigger: GTTCCCTGTCTTCAGTGCCTGATGTGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CCA 90 bp GAATTGGTATTTGGTAGGTTCAAGGACTCTCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGGTTTTTACTGGGTACTGAAGCCTCT +
Preference number: 1 (lower is better)
Translates to: ELVFGRFKDSPPRLG*EFIDTRFLLGTEAS
Trigger: AGAGGCTTCAGTACCCAGTAAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAACCTACCAAATACCAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CCA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATT +
Preference number: 1 (lower is better)
Translates to: GRVAKAESCAFKDSF*FCCGLRHPVPSIRI
Trigger: AATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR CCA 90 bp GGAGCGGTCATTTCGATGAGTCTTGAGGTGGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTCACAACCTTCAACTGTACACTTGAG +
Preference number: 1 (lower is better)
Translates to: GAVISMSLEVVFKVS*PYKCPVTTFNCTLE
Trigger: CTCAAGTGTACAGTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTCAAGACTCATCGAAATGACCGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR CCA 90 bp AAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGA +
Preference number: 1 (lower is better)
Translates to: KSRVLCLQRFILVLL*AKASCSQYTHFEIR
Trigger: TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR CCA 90 bp AGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTaGTCTATCCCAGAAATTTGCAGTGGGAAGAGAGGTAGGTACAGT +
Preference number: 1 (lower is better)
Translates to: SQNEELQPTHNQIHF*SIPEICSGKRGRYS
Trigger: ACTGTACCTACCTCTCTTCCCACTGCAAATTTCTGGGATAGACCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR CAA 90 bp GGGGATCCTTCAGCAAGCACCTCATCATCAACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAGGACTCTCCACCAAGGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GDPSASTSSSTPRIE*VFGRFKDSPPRLGW
Trigger: CCAGCCCAGCCTTGGTGGAGAGTCCTTGAACCTACCAAATACCAATTCTATCCTGGGAGTTGATGATGAGGTGCTTGCTGAAGGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR TCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 2 (lower is better)
Translates to: LVLLWAKASCSQYTHFEISWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR CAA 90 bp TGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCCACGCT +
Preference number: 2 (lower is better)
Translates to: WFCCGLRHPVPSIRI*RSDRVALPGVSTHA
Trigger: AGCGTGGGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR TCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 2 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR TCA 90 bp AGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGCTTCACAAAGGAAATGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 2 (lower is better)
Translates to: RLEYSAKERPHPWASQRKCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...TTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR TCA 90 bp GACATTTTCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 2 (lower is better)
Translates to: DIFSIAAGFCILCQLCTSSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...ACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR GCA 90 bp GTTGCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: VALPGVSTHAHVRLSVKSGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...AGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CCA 90 bp GTTTCCAGCTGTAGTAAACTGCTTACCACAGCCAGACTCATGGCACATAAAGGGGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VSSCSKLLTTARLMAHKGERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...CCCTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CCA 90 bp TCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: SPLLLVFAFFASCARVAANPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...TGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR TCA 90 bp CAGAAACTTCATATGATTGCCTCCCTGACTGCATGGTCACCAGGTGATGTGTCAAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 2 (lower is better)
Translates to: QKLHMIASLTAWSPGDVSNSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...TGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398139.7
3UTR-3UTR TCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 2 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VPSIRILRSDRVALPGVSERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR CCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR CAA 90 bp GGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATC +
Preference number: 2 (lower is better)
Translates to: GKSRVLCLQRFILVL*WAKASCSQYTHFEI
Trigger: GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR GCA 90 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SIAAGFCILCQLCTSSSNCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR GCA 90 bp CCAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: PESFDCPSPEPRWTFSPLECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...CAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR GCA 90 bp GAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 2 (lower is better)
Translates to: ESAPTLMSVFQLNLLGLVGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...TACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR TCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR TCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR TCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR CCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LLLRLLKGECNKRIDITPILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTACCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CCA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CCA 90 bp TGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 2 (lower is better)
Translates to: WQKQSLVPSKIHSGSVVGFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...GCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CCA 90 bp GTAACTCTTGTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VTLVDLLQLRQKLHMIASPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...GGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCACAAGAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: VTRELTSLPSSKQQGILKILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CCA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTAATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CCA 90 bp GACATTTTCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 2 (lower is better)
Translates to: DIFSIAAGFCILCQLCTSFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...ACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 2 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR TCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCACCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR TCA 90 bp AAAGGAAAACCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: KGKPPLNSQNEELQPTHNQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...ATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGTTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR TCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCACTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 2 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR TCA 90 bp AGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 2 (lower is better)
Translates to: RIDITPFFKATRHLENSTVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...AGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398139.7
3UTR-3UTR CCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 2 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGTCAGTTAAATCTCCTTaGTTTAGTAACTGTAGTAGC +
Preference number: 2 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRSVKSP*FSNCSS
Trigger: GCTACTACAGTTACTAAACCAAGGAGATTTAACTGA...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442160.7
3UTR TCA 72 bp CTGCATGGTCACCAGGTGATGTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGATCCTTCAGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: LHGHQVMCHIRH*RQGTWGSFSKH
Trigger: GTGCTTGCTGAAGGATCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACACATCACCTGGTGACCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CCA 72 bp ACTGTCATGGGCCAACTCCTGAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAA +
Preference number: 3 (lower is better)
Translates to: TVMGQLLNPEEP*NATVCALTGEE
Trigger: TTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR TCA 72 bp CGAGTAGCAGCAATCAAACTGTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGAATGCTACTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: RVAAIKLSWANS*TRRNHGMLLSV
Trigger: CACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGACAGTTTGATTGCTGCTACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR GCA 72 bp CGCCGGTGGTTCTTCAGGTTTCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCATGGCACATAAAGGGC +
Preference number: 3 (lower is better)
Translates to: RRWFFRFPAVVN*LPQPDSWHIKG
Trigger: GCCCTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGGAAACCTGAAGAACCACCGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CAA 90 bp AGGTTTCCAGCTGTAGTAAACTGCTTACCACAGCCAGACTCATGGCACATAAAGGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: RFPAVVNCLPQPDSWHIKGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...CTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR GCA 72 bp CCTGAATCTTCTGCCTCATCCTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGACCTGCTCTTGTTAGG +
Preference number: 3 (lower is better)
Translates to: PESSASSCTNTK*SAEEPRPALVR
Trigger: CCTAACAAGAGCAGGTCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACAGGATGAGGCAGAAGATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR CAA 90 bp GTTCAAGGACTCTCCACCAAGGCTGGGCTGGGAATTCATAGACACCAGGTTTTTTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: VQGLSTKAGLGIHRHQVFFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...AAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR CAA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 3 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CAA 90 bp AGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGCTTCACAAAGGAAACCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 3 (lower is better)
Translates to: RLEYSAKERPHPWASQRKPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...TTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CCA 72 bp TTTGGTAGGTTCAAGGACTCTCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGGTTTTTACTGGGTACT +
Preference number: 3 (lower is better)
Translates to: FGRFKDSPPRLG*EFIDTRFLLGT
Trigger: AGTACCCAGTAAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAACCTACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CCA 72 bp AGACAGAAACTTCATATGATTGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCACATCAGGCACTGAAG +
Preference number: 3 (lower is better)
Translates to: RQKLHMIASLTA*SPGDVSHQALK
Trigger: CTTCAGTGCCTGATGTGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR CAA 90 bp TTCAAGGACTCTCCACCAAGGCTGGGCTGGGAATTCATAGACACCAGGTTTTTATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: FKDSPPRLGWEFIDTRFLFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...TAAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR-3UTR CAA 90 bp GAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: ESAPTLMSVFQLNLLGLVFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...TACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
3UTR GCA 72 bp TTTTACTGGGTACTGAAGCCTCTTCAAGCAAACTACTaGCCATTAGTGGCTCAGCAGTTTGCTCCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: FYWVLKPLQANY*PLVAQQFAPAL
Trigger: AAGAGCAGGAGCAAACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR GCA 72 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAAACTGTCATGGGCCAA +
Preference number: 3 (lower is better)
Translates to: SIAAGFCILCQL*TSSSNQTVMGQ
Trigger: TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR CAA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 3 (lower is better)
Translates to: LVLLWAKASCSQYTHFEISLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398139.7
3UTR-3UTR CAA 90 bp TTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 3 (lower is better)
Translates to: FAFFASCARVAAIKLSWAKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...GGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
3UTR-3UTR CAA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCAGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 3 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CAA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: QRFILVLLWAKASCSQYTPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR CAA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCACCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: SRVLCLQRFILVLLWAKAPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR CAA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 3 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHSLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR CCA 72 bp GTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCCCAGTATACGCATTTT +
Preference number: 3 (lower is better)
Translates to: VLCLQRFILVLL*AKASCSQYTHF
Trigger: AAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR CAA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CAA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGACCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR-3UTR CAA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CAA 90 bp GATCCTTCAGCAAGCACCTCATCATCAACTCCCAGGATAGAATTGGTATTTGGTTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 3 (lower is better)
Translates to: DPSASTSSSTPRIELVFGWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...ACCAAATACCAATTCTATCCTGGGAGTTGATGATGAGGTGCTTGCTGAAGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR CCA 72 bp ATTTCGATGAGTCTTGAGGTGGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTCACAACCTTCAACTGT +
Preference number: 3 (lower is better)
Translates to: ISMSLEVVFKVS*PYKCPVTTFNC
Trigger: ACAGTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTCAAGACTCATCGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CAA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 3 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VPSIRILRSDRVALPGVSNVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp GTAACTCTTGTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 3 (lower is better)
Translates to: VTLVDLLQLRQKLHMIASCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...GGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCACAAGAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CAA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 3 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CAA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 3 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
3UTR-3UTR CAA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTAGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 3 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR-3UTR CAA 90 bp TTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 3 (lower is better)
Translates to: LFHPCEKTAESGMKTLQRGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...CCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCATCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 3 (lower is better)
Translates to: LLKGECNKRIDITPFFKASLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR-3UTR CAA 90 bp TTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGAAATCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 3 (lower is better)
Translates to: FHPCEKTAESGMKTLQRKSLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...TTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CACATTCCTGCTTCCACTCTGAGAGAAGGTCTTCCCACAGACTTGGCACTGATGGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: HIPASTLREGLPTDLALMGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...CATCAGTGCCAAGTCTGTGGGAAGACCTTCTCTCAGAGTGGAAGCAGGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATCAGTGTCGTGTGGCTaGCGCACTGCTCGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRSVSCG*RTARDP
Trigger: TGGGTCCCGAGCAGTGCGGCAGCCACACGACACTGA...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555730.6
CDS-3UTR TCA 90 bp TTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: FQESAPTLMSVFQLNLLGGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...ACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp AAGCCTCTTCAAGCAAACTACTGCCCATTAGTGGCTCAGCAGTTTGCTCCTGCTTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KPLQANYCPLVAQQFAPACHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...AGCAGGAGCAAACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR TCA 90 bp GCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ALPGVSTHAHVRLSVKSPCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...AGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR GCA 90 bp CCCAGCTGCTCCCAGCTGCAGGTGATGCTTTCTCATATGCACATTCCTGCTTCCCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PSCSQLQVMLSHMHIPASPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...GGAAGCAGGAATGTGCATATGAGAAAGCATCACCTGCAGCTGGGAGCAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp TTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: FAFFASCARVAAIKLSWARLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...GGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp CTGGGTACTGAAGCCTCTTCAAGCAAACTACTGCCCATTAGTGGCTCAGCAGTTCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LGTEASSSKLLPISGSAVPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...AACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTTCAGTACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp GCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTGATAGTACCTCAGCCTaGGCCAAGGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: ALPGVSTHAHVRLSVKSPDSTSA*AKGRFK
Trigger: CTTGAATCTCCCCTTGGCCCAGGCTGAGGTACTATC...AGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398139.7
CDS-3UTR TCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: VPSIRILRSDRVALPGVSSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: SPLLLVFAFFASCARVAAGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...TGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp CTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LPGVSTHAHVRLSVKSPWSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...CCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTAGGCAGAGGTTGCAGTaGGCCGAGAACGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVRQRLQ*AENAPL
Trigger: CAGTGGTGCGTTCTCGGCTCACTGCAACCTCTGCCT...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442160.7
CDS-3UTR GCA 90 bp TTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCTCGGGAGGTAGAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LCLQRFILVLLWAKASCSSGGRG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTCTACCTCCCGA...GGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000557214.2
CDS-3UTR CCA 90 bp TGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: WQKQSLVPSKIHSGSVVGRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...GCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFERLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: CAFKDSFWFCCGLRHPVPASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...GGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: QESAPTLMSVFQLNLLGLASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...TAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCACGCCTCAGTGTCGTGTaGCTGCCGCACTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPRLSVV*LPHCSG
Trigger: TCCCGAGCAGTGCGGCAGCCACACGACACTGAGGCG...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555730.6
CDS-3UTR TCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: LCLQRFILVLLWAKASCSGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...GGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: VPSIRILRSDRVALPGVSGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp CCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PVPSIRILRSDRVALPGVCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...GACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp GACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: DITPFFKATRHLENSTSWRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...CCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTTGCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VALPGVSTHAHVRLSVKSPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...AGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGACCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCGATAGTACCTCAGCCTaGGCCAAGGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIDSTSA*AKGRFK
Trigger: CTTGAATCTCCCCTTGGCCCAGGCTGAGGTACTATC...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCGGGATGGACGTATTCTaGACAAACTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIGMDVF*TNCTRS
Trigger: GCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCC...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AAGCCTCTTCAAGCAAACTACTGCCCATTAGTGGCTCAGCAGTTTGCTCCTGCTCAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: KPLQANYCPLVAQQFAPAQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...AGCAGGAGCAAACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR TCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLISFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: DITPFFKATRHLENSTSWCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...CCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAATTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CILCQLCTSSSNQTVMGQFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR CCA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEINPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTACTGTCTGTGCTCTCACTGGAGAGGAAATCATTCCCTGAATCTTCTGCCTCAAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLSVLSLERKSFPESSASNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...TGAGGCAGAAGATTCAGGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp CCAAGGCTGGGCTGGGAATTCATAGACACCAGGTTTTTACTGGGTACTGAAGCCTCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PRLGWEFIDTRFLLGTEASPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...GGCTTCAGTACCCAGTAAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GRVAKAESCAFKDSFWFCPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...ACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: GRVAKAESCAFKDSFWFCASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...ACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGGATAGTACCTCAGCCTaGGCCAAGGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEDSTSA*AKGRFK
Trigger: CTTGAATCTCCCCTTGGCCCAGGCTGAGGTACTATC...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR CAA 72 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRI*RSDRVALPGVS
Trigger: GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
3UTR CAA 72 bp GCTTCTTTTCCACTTGAGGAAGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAACCAAGGTGGACATTTT +
Preference number: 4 (lower is better)
Translates to: ASFPLEEGAQNL*TAHHQNQGGHF
Trigger: AAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCAGGGATGGACGTATTCTaGACAAACTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRVLCLQRFILVLLWAKAGMDVF*TNCTRS
Trigger: GCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCC...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ALPGVSTHAHVRLSVKSPNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...AGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp TGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAACAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: CILCQLCTSSSNQTVMGQQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTATCACTTTCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: EPRPALVRLRRIKEVLSLSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...AAGTGATAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp TTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATAGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: FKDSFWFCCGLRHPVPSIGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...TATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: FCILCQLCTSSSNQTVMGSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...GCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCAAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SRVLCLQRFILVLLWAKASFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: LFQESAPTLMSVFQLNLLERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...AAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: QRFILVLLWAKASCSQYTLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAATGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LLLVFAFFASCARVAAIKCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...TTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR TCA 90 bp CTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPGVSTHAHVRLSVKSPWPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...CCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp ACTCCTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGATCTAGTCATCTCTTCTaGACTCCAAACCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: TPEPGGTMECYCLCSHWRSSHLF*TPNLHF
Trigger: GAAATGAAGGTTTGGAGTTCAGAAGAGATGACTAGA...TCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554582.5
CDS-3UTR GCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ALPGVSTHAHVRLSVKSPIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...AGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR GCA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCCCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTACTGTCTGTGCTCTCACTGGAGAGGAAATCATTCCCTGAATCTTCTGCCTCACCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSVLSLERKSFPESSASPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...TGAGGCAGAAGATTCAGGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGCCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCAAGGACTCTCCACCAAGGCTGGGCTGGGAATTCATAGACACCAGGTTTTTACCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: FKDSPPRLGWEFIDTRFLPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...TAAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCGGGAGGTAGAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPSGGRG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTCTACCTCCCGA...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398139.7
CDS-3UTR CCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VPSIRILRSDRVALPGVSKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGAAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAATTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LNPEEPWNATVCALTGEEFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...TTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QRFILVLLWAKASCSQYTPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DSFWFCCGLRHPVPSIRIPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...AATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GAGGTGGTATTTAAAGTGAGCTGGCCATACAAATGTCCGGTCACAACCTTCAACCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVVFKVSWPYKCPVTTFNPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...GTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR CCA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATAGCCTCCCTGACTGCATaGTCACCAGGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: FKDSFWFCCGLRHPVPSIASLTA*SPGDVS
Trigger: TGACACATCACCTGGTGACCATGCAGTCAGGGAGGC...TATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGATAGTACCTCAGCCTaGGCCAAGGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVDSTSA*AKGRFK
Trigger: CTTGAATCTCCCCTTGGCCCAGGCTGAGGTACTATC...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GAAGGGGCCCAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: EGAQNLLTAHHQNQGGHFNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...AAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp GAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTACAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: ESAPTLMSVFQLNLLGLVQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...TACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTATCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLSWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCATCATGGGCCAACTCCTaGACCCGGAGGAACCATGGA +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKASWANS*TRRNHG
Trigger: TCCATGGTTCCTCCGGGTTCAGGAGTTGGCCCATGA...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGGGGCCCAGAATCTTTTaGCTGCCCATCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRGPRIF*LPITRT
Trigger: GGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCC...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTACTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCACTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PGVSTHAHVRLSVKSPWFVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...AAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR TCA 90 bp CTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LFQESAPTLMSVFQLNLLVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...AAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp AAAGGAAAACCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATTGTCACATCAGGCACTaGAGACAGGGAACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KGKPPLNSQNEELQPTHNCHIRH*RQGTWG
Trigger: TCCCCACGTTCCCTGTCTTCAGTGCCTGATGTGACA...ATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGTTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAATGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAATGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KRSSPTSIFYTRKEEEWQCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...TTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TGTTGTTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTTGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: CCFLRLLGSVLLVWNPKGCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...ACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR TCA 90 bp AGATGTTTTCGGAGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGCTCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RCFRRLEYSAKERPHPWAPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...AGCCCAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCTCCGAAAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR TCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGCAACAAGGCATCTTaGAAACTCAACTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEISNKAS*KLNFLV
Trigger: CACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCT...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGCTTCACAAAGGAAAGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RLEYSAKERPHPWASQRKGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...TTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp ACTCCTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGACATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPEPGGTMECYCLCSHWRHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...TCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp CTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAACATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LNPEEPWNATVCALTGEEHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...TTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGACCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTTTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGATTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: QRFILVLLWAKASCSQYTPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CAGAAACTTCATATGATTGCCTCCCTGACTGCATGGTCACCAGGTGATGTGTCATCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QKLHMIASLTAWSPGDVSSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...TGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR GCA 90 bp CAGAAACTTCATATGATTGCCTCCCTGACTGCATGGTCACCAGGTGATGTGTCAGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QKLHMIASLTAWSPGDVSETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...TGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLRLLSV*THIHPK
Trigger: CTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACG...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCTCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTTGCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: VALPGVSTHAHVRLSVKSVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...AGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCACCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DSFWFCCGLRHPVPSIRIILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...AATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QRFILVLLWAKASCSQYTILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LPGVSTHAHVRLSVKSPWFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...CCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTGATAGTACCTCAGCCTaGGCCAAGGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: LRHPVPSIRILRSDRVALDSTSA*AKGRFK
Trigger: CTTGAATCTCCCCTTGGCCCAGGCTGAGGTACTATC...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
3UTR CAA 72 bp TCAGCAAGCACCTCATCATCAACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAGGACTCTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SASTSSSTPRIE*VFGRFKDSPPR
Trigger: CCTTGGTGGAGAGTCCTTGAACCTACCAAATACCAATTCTATCCTGGGAGTTGATGATGAGGTGCTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
3UTR CAA 72 bp TTCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAATCAAACTGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: FSIAAGFCILCQ*CTSSSNQTVMG
Trigger: GCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCGGGATGGACGTATTCTaGACAAACTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPGMDVF*TNCTRS
Trigger: GCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCC...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCACAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATCAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTACAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TGTTGTTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: CCFLRLLGSVLLVWNPKGSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...ACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR TCA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLILQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: PSIRILRSDRVALPGVSTRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAACTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGTGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTTTCCAGCTGTAGTAAACTGCTTACCACAGCCAGACTCATGGCACATAAAGGGCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VSSCSKLLTTARLMAHKGPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...CCCTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR TCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYNSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GRVAKAESCAFKDSFWFCNSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...ACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: DITPFFKATRHLENSTSWNSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...CCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATAGCAACAAGGCATCTTaGAAACTCAACTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHSNKAS*KLNFLV
Trigger: CACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCT...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: DSFWFCCGLRHPVPSIRIVTLAD*ILRLQS
Trigger: TGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTAC...AATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SIAAGFCILCQLCTSSSNVTLAD*ILRLQS
Trigger: TGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTAC...ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp TTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCCTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FAFFASCARVAAIKLSWALGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...GGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFECTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VPSIRILRSDRVALPGVSCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: FCILCQLCTSSSNQTVMGECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...GCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp AAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KRSSPTSIFYTRKEEEWQGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...TTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VQFPSPQSLLHSLSDQMVGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...TACCATCTGATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SIAAGFCILCQLCTSSSNGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp GATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DSFWFCCGLRHPVPSIRIGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...AATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATCCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GATCCTTCAGCAAGCACCTCATCATCAACTCCCAGGATAGAATTGGTATTTGGTCCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: DPSASTSSSTPRIELVFGPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...ACCAAATACCAATTCTATCCTGGGAGTTGATGATGAGGTGCTTGCTGAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR GCA 90 bp GTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLCLQRFILVLLWAKASCSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR GCA 90 bp GAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: ESAPTLMSVFQLNLLGLVETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...TACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR GCA 90 bp GTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: VLCLQRFILVLLWAKASCETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCTGTCCCAATGGGATaGACGTATTCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: QRFILVLLWAKASCSQYTPVPMG*TYSEQT
Trigger: AGTTTGTTCAGAATACGTCCATCCCATTGGGACAGG...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGCCCTGTCCCAATGGGATaGACGTATTCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: QNLLTAHHQNQGGHFLHCPVPMG*TYSEQT
Trigger: AGTTTGTTCAGAATACGTCCATCCCATTGGGACAGG...GCAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp GCTGAAGAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTAAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: AEEPRPALVRLRRIKEVLKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...TAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTCTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp GTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCTGACTGCAAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VDLLQLRQKLHMIASLTANPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...TGCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCCCACAGCCAGACTCATaGCACATAAAGGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPPQPDS*HIKGFS
Trigger: AGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGG...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LRHPVPSIRILRSDRVALERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAAGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCACCAAGGCTGGGCTaGGAATTCATAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: SLLLRLLKGECNKRIDITPPRLG*EFIDTR
Trigger: CCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGG...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
CDS-3UTR CCA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCCCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: LVLLWAKASCSQYTHFEIPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTCAGTTAAATCTCCTTaGTTTAGTAACTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: FQESAPTLMSVFQLNLLGSVKSP*FSNCGP
Trigger: GGGACCACAGTTACTAAACCAAGGAGATTTAACTGA...ACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000557214.2
3UTR CAA 72 bp AGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGTTCCCAGTATACGCAT +
Preference number: 4 (lower is better)
Translates to: RVLCLQRFILVL*WAKASCSQYTH
Trigger: ATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp GAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTATCACTTGGGATGGACGTATTCTaGACAAACTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPRPALVRLRRIKEVLSLGMDVF*TNCTRS
Trigger: GCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCC...AAGTGATAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp TTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCLQRFILVLLWAKASCSNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...GGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SIAAGFCILCQLCTSSSNNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR TCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCCAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCAAGCTAGAAGACTCTaGAGTGGACAAAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: LRHPVPSIRILRSDRVALQARRL*SGQKLR
Trigger: CCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTG...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: WQKQSLVPSKIHSGSVVGLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...GCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: VPSIRILRSDRVALPGVSLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGACTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GACATTTTCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: DIFSIAAGFCILCQLCTSERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...ACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR TCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGCTTCTGCAGGACAGATaGAGGAGCGGTCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRLLQDR*RSGHFD
Trigger: ATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAG...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAATGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTTGCATGGTCACCAGGTaGTGTGTCACATCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLCMVTR*CVTSGT
Trigger: AGTGCCTGATGTGACACATCACCTGGTGACCATGCA...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVPSIRILRSDRVALPGVPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...GACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTCAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTAGCAACAAGGCATCTTaGAAACTCAACTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVSNKAS*KLNFLV
Trigger: CACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCT...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGCAACAAGGCATCTTaGAAACTCAACTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLSNKAS*KLNFLV
Trigger: CACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCT...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCAAGAGCCAAAGAACTaGCTGGGCTGTTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHQEPKN*LGCFVY
Trigger: ATAAACAAAACAGCCCAGTCAGTTCTTTGGCTCTTG...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR GCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDVTLAD*ILRLQS
Trigger: TGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTAC...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYVTLAD*ILRLQS
Trigger: TGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTAC...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGGTTTCCAGCTGTAGTAAACTGCTTACCACAGCCAGACTCATGGCACATAAAGCTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: RFPAVVNCLPQPDSWHIKLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...CTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTATCACTTGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: EPRPALVRLRRIKEVLSLGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...AAGTGATAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp TGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: WQKQSLVPSKIHSGSVVGILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...GCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CCAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: PESFDCPSPEPRWTFSPLILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...CAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGCATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QNLLTAHHQNQGGHFLHCIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...GCAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCAATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SRVLCLQRFILVLLWAKAIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTCCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGTTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATCCTGTCCCAATGGGATaGACGTATTCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDPVPMG*TYSEQT
Trigger: AGTTTGTTCAGAATACGTCCATCCCATTGGGACAGG...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCTTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CAFKDSFWFCCGLRHPVPFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...GGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGATCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGTCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCATCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAATCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLVFAFFASCARVAAIKSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...TTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCAGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SRVLCLQRFILVLLWAKAVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGAGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGACCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: SIAAGFCILCQLCTSSSNPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CCA 90 bp GTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTACCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: VQFPSPQSLLHSLSDQMVPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...TACCATCTGATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
3UTR CAA 72 bp GTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VQFPSPQSLLHS*SDQMVVRKEAL
Trigger: GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
3UTR CAA 72 bp TTTTGCAGCCCAGTGGCAGAGAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAACAAGAGAATTGACATC +
Preference number: 4 (lower is better)
Translates to: FCSPVAESLLLR*LKGECNKRIDI
Trigger: GATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACTCTCTGCCACTGGGCTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAGGGATGGACGTATTCTaGACAAACTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKAGMDVF*TNCTRS
Trigger: GCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCC...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATAGCTTCTTTTCCACTTaGGGAAGGGGCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LLHSLSDQMVVRKEALLHSFFST*GRGPES
Trigger: AGATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCT...ATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LQRFILVLLWAKASCSQYVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...ATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTTTTTACTGGGTACTaGAGCCTCTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGVFTGY*SLFKQT
Trigger: AGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAAAC...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGACCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR TCA 90 bp CATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGACAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HPVPSIRILRSDRVALPGQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...TCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAACTCAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAPTLMSVFQLNLLGLVTQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...AGTTACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398139.7
CDS-3UTR TCA 90 bp GCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTACAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AKAESCAFKDSFWFCCGLQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...TAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QMVVRKEALLHPSSIPGKNSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...CTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAATTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: CILCQLCTSSSNQTVMGQLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LLLRLLKGECNKRIDITPVTLAD*ILRLQS
Trigger: TGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTAC...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCACTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GCTGAAGAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTATGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEEPRPALVRLRRIKEVLCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...TAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTCTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR GCA 90 bp AAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KRSSPTSIFYTRKEEEWQECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...TTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAAGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TGTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCTGACTGCGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: CGFTAVKTETSYDCLPDCECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...GCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp GTAACTCTTGTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VTLVDLLQLRQKLHMIASGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...GGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCACAAGAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCATTTCCCACAACCTTCTaGAGGACAGATGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKAFPTTF*RTDEGA
Trigger: CGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAA...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LRHPVPSIRILRSDRVALSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAAAGCCCCTGTCCCAATaGGATGGACGTATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKAKPLSQ*DGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTT...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGAACCCGGAGGAACCATaGAATGCTACTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LFHPCEKTAESGMKTLQRNPEEP*NATVCA
Trigger: AGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTT...CCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATTTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTATTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VQFPSPQSLLHSLSDQMVFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...TACCATCTGATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTGAACGGCCACATCCTTaGGCTTCACAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLLLRLLKGECNKRIDITERPHP*ASQRKG
Trigger: ACCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTC...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp CACCAGATGTTTTCGGAGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGTCAGTTAAATCTCCTTaGTTTAGTAACTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HQMFSEARILSKGTATSLSVKSP*FSNSCG
Trigger: TCCACAAGAGTTACTAAACCAAGGAGATTTAACTGA...CAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCTCCGAAAACATCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR CCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTCCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCACCAGGAGCTCTGGTTTaGATTCTAACTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPPGALV*ILTHLI
Trigger: TATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGG...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGTCGGTTCAGTTTTACTaGTATGGAATCCTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ILVLLWAKASCSQYTHFESVQFY*YGILRV
Trigger: TACCCTTAGGATTCCATACCAGTAAAACTGAACCGA...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR TCA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAAAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKNIFSF*FYKPLS
Trigger: GGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATT...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATTGGAGGAGTTAGAATaGTTTGTAGTATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: VLLWAKASCSQYTHFEIRLEELE*FVVSSG
Trigger: ACCAGATGATACTACAAATCATTCTAACTCCTCCAA...TCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTTTGGAGGAGTTAGAATaGTTTGTAGTATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPLEELE*FVVSSG
Trigger: ACCAGATGATACTACAAATCATTCTAACTCCTCCAA...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAACTGTAGTAAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: PTLMSVFQLNLLGLVTVVRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...TACTACAGTTACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442160.7
CDS-3UTR TCA 90 bp AAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: KEALLHPSSIPGKRKSGKRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...TTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGAGCGGTCATTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPERSFR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAATGACCGCTC...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAAACTCAACTTCCTGGTaGAGCTCTGTTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKANSTSW*SSVVGS
Trigger: GCTACCAACAACAGAGCTTCACCAGGAAGTTGAGTT...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: WQKQSLVPSKIHSGSVVGLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...GCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCCCACAACCTTCGATaGGTCTTGAGGTGGTATTTA +
Preference number: 4 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSSHNLR*VLRWYL
Trigger: TAAATACCACCTCAAGACTCATCGAAGGTTGTGGGA...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398139.7
CDS-3UTR GCA 90 bp AAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAACTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: KEALLHPSSIPGKRKSGKLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...TTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGGGAGGAACCATGGAATaGTACTGTCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWGGTME*YCLCSH
Trigger: GTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCTGACTGCAATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VDLLQLRQKLHMIASLTAIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...TGCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR GCA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGACATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCCATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCACATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SRVLCLQRFILVLLWAKAHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAACCAGAATCTTTTGACTaGCCATCACCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKPESFD*PSPEPR
Trigger: CCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAACCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGTCATATGCACATTCCTaGTTCCACTCTGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKSYAHS*FHSERR
Trigger: CCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGA...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTCCTGTCCCAATGGGATaGACGTATTCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPPVPMG*TYSEQT
Trigger: AGTTTGTTCAGAATACGTCCATCCCATTGGGACAGG...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTTCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp AAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: KRSSPTSIFYTRKEEEWQVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...TTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATATTCTGGTTCTGTTGTaGGCTAAGGCATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLHSLSDQMVVRKEALLHILVLL*AKASCS
Trigger: GGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT...ATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCATTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CCA 90 bp TTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: LCLQRFILVLLWAKASCSRCCTR*VINVTF
Trigger: GAAGGTTACATTGATTACCCACCTAGTACAACATCT...GGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: ESCAFKDSFWFCCGLRHPRCCTR*VINVTF
Trigger: GAAGGTTACATTGATTACCCACCTAGTACAACATCT...AGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGATTGGAGGAGTTAGAATaGTTTGTAGTATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRLEELE*FVVSSG
Trigger: ACCAGATGATACTACAAATCATTCTAACTCCTCCAA...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: QMVVRKEALLHPSSIPGKLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...CTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR TCA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCATTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: RHPVPSIRILRSDRVALPLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTTTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR GCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAATGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKCTNTK*SAEEPR
Trigger: TCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SCAFKDSFWFCCGLRHPVHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...AACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGCCAGCTGTAGTAAACTaGTTACCACAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWPAVVN*LPQPDS
Trigger: TGAGTCTGGCTGTGGTAAGCAGTTTACTACAGCTGG...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTGAAACTTCATATGATTaGCTCCCTGACTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLETSYD*LPDCMV
Trigger: GACCATGCAGTCAGGGAGGCAATCATATGAAGTTTC...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGTATCATTCAAGTCACTaGAGCCTGACTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKYHSSH*SLTFHP
Trigger: AGGATGGAAAGTCAGGCTGCAGTGACTTGAATGATA...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442160.7
CDS-3UTR CCA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCTGTCCCAATGGGATaGACGTATTCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: SLLLRLLKGECNKRIDITPVPMG*TYSEQT
Trigger: AGTTTGTTCAGAATACGTCCATCCCATTGGGACAGG...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TGTGGATTTACTGCAGTTAAGACAGAAACTTCATATGATTGCCTCCCTGACTGCTTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CGFTAVKTETSYDCLPDCFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...GCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAAATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CCA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTTTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTTCACCAGAACCAAGGTaGACATTTTCTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLLRLLKGECNKRIDITSPEPR*TFSPLL
Trigger: CAGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGA...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCTCAGTTAAATCTCCTTaGTTTAGTAACTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRSVKSP*FSNSCG
Trigger: TCCACAAGAGTTACTAAACCAAGGAGATTTAACTGA...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVRCCTR*VINVTF
Trigger: GAAGGTTACATTGATTACCCACCTAGTACAACATCT...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDRCCTR*VINVTF
Trigger: GAAGGTTACATTGATTACCCACCTAGTACAACATCT...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTATCAGTTAAATCTCCTTaGTTTAGTAACTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: ESAPTLMSVFQLNLLGLVSVKSP*FSNCSS
Trigger: GCTACTACAGTTACTAAACCAAGGAGATTTAACTGA...TACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442160.7
CDS-3UTR TCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCTTCAACTGTACACTTaGGCTTCTTTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLLQLYT*ASFPLE
Trigger: CTCAAGTGGAAAAGAAGCTCAAGTGTACAGTTGAAG...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTAGGTGGTATTTAAAGTaGGCTGGCCATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLRWYLK*AGHTNV
Trigger: GACATTTGTATGGCCAGCTCACTTTAAATACCACCT...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCACCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKAPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCCAGTATACGCATTTTaGGATCAGATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLPVYAF*DQIELL
Trigger: GAGCAACTCTATCTGATCTCAAAATGCGTATACTGG...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCAGCTGAGTCTGGGATaGAAACTCTTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLLLRLLKGECNKRIDITQLSLG*KLFKGK
Trigger: TTTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTG...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp AAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAATTAATTCAGAGCCAATaGTACCTTCCTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: KEALLHPSSIPGKRKSGKLIQSQ*YLPVMF
Trigger: GAACATAACAGGAAGGTATCATTGGCTCTGAATTAA...TTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR TCA 90 bp CAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGCCTGGGCTTAAGAAATaGAGATGTTCTTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: QMVVRKEALLHPSSIPGKPGLKK*RCSCCF
Trigger: GAAACAACAAGAACATCTTCATTTCTTAAGCCCAGG...CTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR GCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLLGCRS*NKLEDS
Trigger: AGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAG...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGGAATGCTACTGTCTGTaGTCTCACTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWECYCL*SHWRGN
Trigger: ATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTC...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTAATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR GCA 90 bp TTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGAAAATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: FHPCEKTAESGMKTLQRKILCQL*TSSSNQ
Trigger: TTGATTGCTGCTACTCGTGCACAACTGGCAAAGAAT...TTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWGFCIL*QLCTSS
Trigger: GCTACTCGTGCACAACTGGCAAAGAATGCAAAAACC...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKAIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLIAAGF*ILCQLC
Trigger: GCACAACTGGCAAAGAATGCAAAAACCAGCAGCAAT...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp TTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: FKDSFWFCCGLRHPVPSIHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...TATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp AGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: RIDITPFFKATRHLENSTVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...AGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGAAAGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FHPCEKTAESGMKTLQRKVFKVS*PYKCPV
Trigger: GACCGGACATTTGTATGGCCAGCTCACTTTAAATAC...TTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR TCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGTTGGAGGAGTTAGAATaGTTTGTAGTATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKLEELE*FVVSSG
Trigger: ACCAGATGATACTACAAATCATTCTAACTCCTCCAA...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR GCA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTCATTTTCTCCATTGCTaGTGGTTTTTGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSHFLHC*WFLHSL
Trigger: CAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATG...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAATTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCAAAGGAAATTTCTCCATTGCTGCTaGTTTTTGCATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FHPCEKTAESGMKTLQRKFLHCC*FLHSLP
Trigger: TGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAA...TTTCCTTTGAAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp TTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATATCAGTTAAATCTCCTTaGTTTAGTAACTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FKDSFWFCCGLRHPVPSISVKSP*FSNSCG
Trigger: TCCACAAGAGTTACTAAACCAAGGAGATTTAACTGA...TATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTATTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCAAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPRCCTR*VINVTF
Trigger: GAAGGTTACATTGATTACCCACCTAGTACAACATCT...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CCA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAATCAGTTAAATCTCCTTaGTTTAGTAACTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VTRELTSLPSSKQQGILKSVKSP*FSNCGP
Trigger: GGGACCACAGTTACTAAACCAAGGAGATTTAACTGA...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398139.7
CDS-3UTR TCA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCATTGGAGGAGTTAGAATaGTTTGTAGTATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LLKGECNKRIDITPFFKALEELE*FVVSSG
Trigger: ACCAGATGATACTACAAATCATTCTAACTCCTCCAA...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGTCAGTTAAATCTCCTTaGTTTAGTAACTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKSVKSP*FSNSCG
Trigger: TCCACAAGAGTTACTAAACCAAGGAGATTTAACTGA...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CCA 90 bp CTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGTTCAAAGATTCATTCTaGTTCTGTTGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LNSQNEELQPTHNQIHFWFKDSF*FCCGLR
Trigger: CCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA...CCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CCA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTTCAGTTAAATCTCCTTaGTTTAGTAACTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QELFHPCEKTAESGMKTLSVKSP*FSNSCG
Trigger: TCCACAAGAGTTACTAAACCAAGGAGATTTAACTGA...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000555044.6
ENST00000555730.6
CDS GCA 90 bp ATGCCCACCCTCCTCACCAGTTTGCTCCTGCTCTTGACTCCCAGCTaGTCCCAGCTGCAGGTGATGCTTTCTCATATGCACATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: MPTLLTSLLLLLTPS*SQLQVMLSHMHIPA
Trigger: AGCAGGAATGTGCATATGAGAAAGCATCACCTGCAGCTGGGAGCAGCTGGGAGTCAAGAGCAGGAGCAAACTGGTGAGGAGGGTGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555620.1
CDS GCA 90 bp TCCTTCAGCAAGCACCTCAGTTTGCTCCTGCTCTTGACTCCCAGCTaGTCCCAGCTGCAGGTGATGCTTTCTCATATGCACATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SFSKHLSLLLLLTPS*SQLQVMLSHMHIPA
Trigger: AGCAGGAATGTGCATATGAGAAAGCATCACCTGCAGCTGGGAGCAGCTGGGAGTCAAGAGCAGGAGCAAACTGAGGTGCTTGCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324593.10
ENST00000541357.6
ENST00000555730.6
CDS CCA 90 bp CCTTTTCCCATTCCGCACCTTCCCAGCCTCTCAAACTTCAGTATATaGGGGAAGGCAGGAAGAGTACACCAGGAGGGCTTTAGCACACTC +
Preference number: 5 (lower is better)
Translates to: PFPIPHLPSLSNFSI*GKAGRVHQEGFSTL
Trigger: GAGTGTGCTAAAGCCCTCCTGGTGTACTCTTCCTGCCTTCCCCCATATACTGAAGTTTGAGAGGCTGGGAAGGTGCGGAATGGGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS-3UTR CAA 90 bp CCCAGCTGCTCCCAGCTGCAGGTGATGCTTTCTCATATGCACATTCCTGCTTCCCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: PSCSQLQVMLSHMHIPASPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...GGAAGCAGGAATGTGCATATGAGAAAGCATCACCTGCAGCTGGGAGCAGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CACCAGATGTTTTCGGAGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: HQMFSEARILSKGTATSLGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...CAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCTCCGAAAACATCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS GCA 90 bp GTGGCAAGGAAAATGCCGACGGGCCTCACCATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTC +
Preference number: 5 (lower is better)
Translates to: VARKMPTGLTIAAGF*ILCQLCTSSSNQTV
Trigger: GACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGGCATTTTCCTTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS-3UTR CAA 90 bp TTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: FAFFASCARVAAIKLSWAGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...GGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp CTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: LFQESAPTLMSVFQLNLLELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...AAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCAGCAAGCACCTCAGTTaGCTCCTGCTCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: PSIRILRSDRVALPGVSTSKHLS*LLLLTP
Trigger: GGGAGTCAAGAGCAGGAGCAAACTGAGGTGCTTGCT...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324593.10
ENST00000555730.6
CDS GCA 90 bp AAAATGCCGACGGGCCTCACCATTGCTGCTGGTTTTTGCATTCTTTaGCAGTTGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAA +
Preference number: 5 (lower is better)
Translates to: KMPTGLTIAAGFCIL*QLCTSSSNQTVMGQ
Trigger: TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS-3UTR CAA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: VPSIRILRSDRVALPGVSGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VPSIRILRSDRVALPGVSGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...GCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGAGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: FQESAPTLMSVFQLNLLGPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...ACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAAACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: LNPEEPWNATVCALTGEETRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...TTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp CTGAACCCGGAGGAACCATGGAATGCTACTGTCTGTGCTCTCACTGGAGAGGAAAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: LNPEEPWNATVCALTGEEKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...TTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCCGGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: FQESAPTLMSVFQLNLLGFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...ACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp TTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTAGCAAGCACCTCAGTTaGCTCCTGCTCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: FILVLLWAKASCSQYTHFSKHLS*LLLLTP
Trigger: GGGAGTCAAGAGCAGGAGCAAACTGAGGTGCTTGCT...AAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324593.10
ENST00000555730.6
CDS GCA 90 bp CCTAGATGGAGAAACCCAGAGAATGTTAAACTGAACATAAGCAGCTaGTCCTTTTCCCATTCCGCACCTTCCCAGCCTCTCAAACTTCAG +
Preference number: 5 (lower is better)
Translates to: PRWRNPENVKLNISS*SFSHSAPSQPLKLQ
Trigger: CTGAAGTTTGAGAGGCTGGGAAGGTGCGGAATGGGAAAAGGAGCAGCTGCTTATGTTCAGTTTAACATTCTCTGGGTTTCTCCATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS-3UTR CAA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: PSIRILRSDRVALPGVSTCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LVLLWAKASCSQYTHFEICILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...GATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATAGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: FKDSFWFCCGLRHPVPSIGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...TATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: RHPVPSIRILRSDRVALPELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: FCCGLRHPVPSIRILRSDELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...ATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAAAGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: KKLSYIHLLYQERGRVAKGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...TTTTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: QESAPTLMSVFQLNLLGLFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...TAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CAA 90 bp GCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: AESCAFKDSFWFCCGLRHPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...ATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS TCA 90 bp TTCAGTCACGGGAAGGAGGGACAAGCAAGTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCCCAATGGGATGGACGTATTCTGAAC +
Preference number: 5 (lower is better)
Translates to: FSHGKEGQASNIFSF*FYKPLSQWDGRILN
Trigger: GTTCAGAATACGTCCATCCCATTGGGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATTACTTGCTTGTCCCTCCTTCCCGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000540593.5
ENST00000541357.6
ENST00000554582.5
ENST00000554797.3
ENST00000555044.6
ENST00000555602.6
ENST00000555730.6
ENST00000556160.5
ENST00000556396.5
ENST00000556659.5
ENST00000556797.1
ENST00000557495.5
ENST00000615736.4
CDS-3UTR CAA 90 bp AAGCCTCTTCAAGCAAACTACTGCCCATTAGTGGCTCAGCAGTTTGCTCCTGCTAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: KPLQANYCPLVAQQFAPAKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...AGCAGGAGCAAACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CCAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: PESFDCPSPEPRWTFSPLCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...CAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: CAFKDSFWFCCGLRHPVPHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...GGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGATGTTTTCGGAGGCTAGAATACTCAGCAAAGGAACGGCCACATCCTTGGGCTTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: RCFRRLEYSAKERPHPWAWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...AGCCCAAGGATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCTCCGAAAACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp TTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: FQESAPTLMSVFQLNLLGWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...ACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
CDS-3UTR CAA 90 bp GAGCCCAGACCTGCTCTTGTTAGGTTAAGAAGAATAAAAGAAGTGCTATCACTTGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: EPRPALVRLRRIKEVLSLGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...AAGTGATAGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp ACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAACTCTTGTGGATGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: TLMSVFQLNLLGLVTLVDGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...ATCCACAAGAGTTACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556396.5
CDS-3UTR CAA 90 bp CTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: LFQESAPTLMSVFQLNLLTPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...AAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGTGCTGACTCCTGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398139.7
ENST00000442160.7
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp CTGGGTACTGAAGCCTCTTCAAGCAAACTACTGCCCATTAGTGGCTCAGCAGTTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LGTEASSSKLLPISGSAVPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...AACTGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTTCAGTACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: QRFILVLLWAKASCSQYTFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp CCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: PVPSIRILRSDRVALPGVFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...GACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp GTTCAAGGACTCTCCACCAAGGCTGGGCTGGGAATTCATAGACACCAGGTTTTTGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: VQGLSTKAGLGIHRHQVFGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...AAAAACCTGGTGTCTATGAATTCCCAGCCCAGCCTTGGTGGAGAGTCCTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp TGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: CGLRHPVPSIRILRSDRVPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...AACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS CCA 90 bp TTCCCACAACCTTCGATGAGTCTTGAGGTGGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTCACAACCTTCAACTGTACACTTGAG +
Preference number: 5 (lower is better)
Translates to: FPQPSMSLEVVFKVS*PYKCPVTTFNCTLE
Trigger: CTCAAGTGTACAGTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTCAAGACTCATCGAAGGTTGTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000639051.1
CDS-3UTR CAA 90 bp AGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SGKSRVLCLQRFILVLLWCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...CCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LCLQRFILVLLWAKASCSHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...GGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: RGRYSFPAHSHCFIPCLIWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...GATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: LLHSLSDQMVVRKEALLHGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...ATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTGGGGCCCAGAATCTTTaGACTGCCCATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLGAQNL*TAHHQN
Trigger: GTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCC...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp AAAGGAAAACCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KGKPPLNSQNEELQPTHNELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...ATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTAGGAACGGCCACATCCTaGGGCTTCACAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLGTATS*GFTKER
Trigger: CCTTTCCTTTGTGAAGCCCAAGGATGTGGCCGTTCC...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: KRGRYSFPAHSHCFIPCLTPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PSIRILRSDRVALPGVSTPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp ACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: TSLPSSKQQGILKTQLPGPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCCAGCCCACAGTCATaGCTTCATTCCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LRHPVPSIRILRSDRVALPSPQS*LHSLSD
Trigger: ATCAGACAAGGAATGAAGCAATGACTGTGGGCTGGG...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: ILVLLWAKASCSQYTHFETRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CCAGAATCTTTTGACTGCCCATCACCAGAACCAAGGTGGACATTTTCTCCATTGACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: PESFDCPSPEPRWTFSPLTRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...CAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS CCA 90 bp CAAGGAAGCCAAAAGGACAGGAAGAGAATGAACTCAAGACCTAGATaGAGAAACCCAGAGAATGTTAAACTGAACATAAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QGSQKDRKRMNSRPR*RNPENVKLNISSCS
Trigger: GGAGCAGCTGCTTATGTTCAGTTTAACATTCTCTGGGTTTCTCCATCTAGGTCTTGAGTTCATTCTCTTCCTGTCCTTTTGGCTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS-3UTR CAA 90 bp ATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: ILVLLWAKASCSQYTHFEKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...CTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GACATTTTCTCCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: DIFSIAAGFCILCQLCTSHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...ACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGAGAAAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GRVAKAESCAFKDSFWFCHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...ACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTGAGCTTCTTTTCCACTaGAGGAAGGGGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITELLFH*RKGPRI
Trigger: GATTCTGGGCCCCTTCCTCAAGTGGAAAAGAAGCTC...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp GTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: VLCLQRFILVLLWAKASCPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp TTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGACCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: FWFCCGLRHPVPSIRILRPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...TCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp CAGGTGATGCTTTCTCATATGCACATTCCTGCTTCCACTCTGAGAGAAGGTCTTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: QVMLSHMHIPASTLREGLPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...AAGACCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGAGAAAGCATCACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000556396.5
CDS-3UTR CAA 90 bp CAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: QRFILVLLWAKASCSQYTGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...CGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCACCTCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: PSIRILRSDRVALPGVSTSLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...GGTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCAAGCAACAAGGCATCTaGAAAACTCAACTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KDSFWFCCGLRHPVPSIRKQQGI*KTQLPG
Trigger: ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTT...GCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAAGCAACAAGGCATCTaGAAAACTCAACTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PVPSIRILRSDRVALPGVKQQGI*KTQLPG
Trigger: ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTT...GACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRTRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS TCA 90 bp ACCCAAAACAGAATCAGAAAATTTCCAGATAAGCAGGCAGGACAGTaGTTTGGCTCTTGGAACCCTAGAAGTAGTACAGCGTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: TQNRIRKFPDKQAGQ*FGSWNPRSSTAFHY
Trigger: ATAGTGGAACGCTGTACTACTTCTAGGGTTCCAAGAGCCAAATCACTGTCCTGCCTGCTTATCTGGAAATTTTCTGATTCTGTTTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555620.1
CDS-3UTR CAA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: RHPVPSIRILRSDRVALPKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAGTAGCAGCAATCAAATGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LLLVFAFFASCARVAAIKWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...TTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556396.5
CDS-3UTR CAA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCATGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: RHPVPSIRILRSDRVALPWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: RHPVPSIRILRSDRVALPTPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...TGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp TTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: FILVLLWAKASCSQYTHFTPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...AAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
ENST00000557214.2
CDS-3UTR CAA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATTCATTCTGGTTCTGTaGTGGGCTAAGGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: LHSLSDQMVVRKEALLHPFILVL*WAKASC
Trigger: ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAA...TGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: VLCLQRFILVLLWAKASCSLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...ACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: SRVLCLQRFILVLLWAKASLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp TGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAAAGCAACAAGGCATCTaGAAAACTCAACTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: CCGLRHPVPSIRILRSDRKQQGI*KTQLPG
Trigger: ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTT...TCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp GGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: GRVAKAESCAFKDSFWFCSLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...ACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVTRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGAGTGGCAAACCAGGAGCTCTGGTTaGGATTCTAACTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: KRSSPTSIFYTRKEEEWQTRSSG*DSNSSD
Trigger: ATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGT...TTGCCACTCTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QELFHPCEKTAESGMKTLCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTATGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SLLHSLSDQMVVRKEALLCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...TAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITCILCQ*CTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCA...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp AAAGGAAAACCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: KGKPPLNSQNEELQPTHNHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...ATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGTTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp GAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: EEWQKQSLVPSKIHSGSVSLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...AACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCCACTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTCATTGCTGCTGGTTTTaGCATTCTTTGCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: QELFHPCEKTAESGMKTLHCCWF*HSLPVV
Trigger: CACAACTGGCAAAGAATGCAAAAACCAGCAGCAATG...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAAGCCCAGTATACGCATTTaGAGATCAGATAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: VVRKEALLHPSSIPGKRKPSIRI*RSDRVA
Trigger: AGCAACTCTATCTGATCTCAAAATGCGTATACTGGG...CTTCCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: QMVVRKEALLHPSSIPGKGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...CTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTTCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LRHPVPSIRILRSDRVALSLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp CAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCAAGCAACAAGGCATCTaGAAAACTCAACTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: QSLLHSLSDQMVVRKEALKQQGI*KTQLPG
Trigger: ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTT...GAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: LTSLPSSKQQGILKTQLPSLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...AGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TGTTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAAATGAAGATGTTCTTGTaGTTTCCTAAGACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: CFLRLLGSVLLVWNPKGKMKMFL*FPKTPR
Trigger: CCGAGGAGTCTTAGGAAACAACAAGAACATCTTCAT...TTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR CAA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTAAGAAGTGCTATCACTaGGCTGTAGATCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: QELFHPCEKTAESGMKTLKKCYH*AVDLAT
Trigger: TGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTT...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTTGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCATGGACATTTTCTCCATaGCTGCTGGTTTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LLKGECNKRIDITPFFKAWTFSP*LLVFAF
Trigger: GAATGCAAAAACCAGCAGCAATGGAGAAAATGTCCA...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITTPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
CDS-3UTR CAA 90 bp GAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: ELTSLPSSKQQGILKTQLGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...AAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: LLHSLSDQMVVRKEALLHGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...ATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000442160.7
ENST00000555044.6
ENST00000555730.6
ENST00000556396.5
CDS-3UTR CAA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAGGCAAAAGCAGAGTCTaGTGCCTTCAAAGATTCATT +
Preference number: 5 (lower is better)
Translates to: VTRELTSLPSSKQQGILKGKSRV*CLQRFI
Trigger: AATGAATCTTTGAAGGCACAAGACTCTGCTTTTGCC...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CAGGAATTATTTCATCCATGTGAAAAGACAGCTGAGTCTGGGATGAAAACTCTTAAGCAACAAGGCATCTaGAAAACTCAACTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: QELFHPCEKTAESGMKTLKQQGI*KTQLPG
Trigger: ACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTT...AAGAGTTTTCATCCCAGACTCAGCTGTCTTTTCACATGGATGAAATAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LRHPVPSIRILRSDRVALNVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...AAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLLRLLKGECNKRIDITPNVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...GGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp AGTCTCTTACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTAGTCTCTTACTCAGGTaGCTAAAGGGAGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: SLLLRLLKGECNKRIDITSLLLR*LKGECN
Trigger: GTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT...AGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAAGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS GCA 90 bp TTTTCTCTAGTCATCTCTTCTGAACTCCAAACCTTCATTTCTAACTaGTTGCTAGGTATCTCCACATGTATATCCAACAGCATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FSLVISSELQTFISN*LLGISTCISNSISN
Trigger: GTTTGAGATGCTGTTGGATATACATGTGGAGATACCTAGCAAGCAGTTAGAAATGAAGGTTTGGAGTTCAGAAGAGATGACTAGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556160.5
CDS-3UTR CAA 90 bp TCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATCAATACACTATTACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SSVQFYWYGILRVNQYTITPRIE*VFGRFK
Trigger: CTTGAACCTACCAAATACCAATTCTATCCTGGGAGT...AATAGTGTATTGATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555044.6
CDS-3UTR CAA 90 bp GTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAATCATTGCTTCATTCCTaGTCTGATCAGATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: VTRELTSLPSSKQQGILKSLLHS*SDQMVV
Trigger: AACTACCATCTGATCAGACAAGGAATGAAGCAATGA...TTTCAAGATGCCTTGTTGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp CATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: HSLSDQMVVRKEALLHPSNVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...AGATGGATGTAGGAGAGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp ATGGTAGTTAGAAAAGAAGCTCTCCTACATCCATCTTCTATACCAGGAAAGAGGAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: MVVRKEALLHPSSIPGKRNVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...CCTCTTTCCTGGTATAGAAGATGGATGTAGGAGAGCTTCTTTTCTAACTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS-3UTR CAA 90 bp TTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAAATGTAACAAGAGAATaGACATCACTCCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLKGECNKRIDITPFFKANVTRE*TSLPSS
Trigger: TGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATT...TGCTTTGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000555044.6
ENST00000555730.6
CDS CCA 90 bp ATAAATTTTAAAAGGTTGCAGATGATTCTACTGTATAGCTATGTTTaGAAACCATCAGCCCATCAAATGAGACCAGGTCTATCTACCCAA +
Preference number: 5 (lower is better)
Translates to: INFKRLQMILLYSYV*KPSAHQMRPGLSTQ
Trigger: TTGGGTAGATAGACCTGGTCTCATTTGATGGGCTGATGGTTTCCAAACATAGCTATACAGTAGAATCATCTGCAACCTTTTAAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555620.1
CDS GCA 72 bp CAGCTGAAGAGCCCAGACCTGGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCACGGGAAGGAGGGACA +
Preference number: 6 (lower is better)
Translates to: QLKSPDLVTLAD*ILRLQSREGGT
Trigger: TGTCCCTCCTTCCCGTGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTACCAGGTCTGGGCTCTTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540593.5
CDS CAA 90 bp CCGACGGGCCTCACCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAACTCCTG +
Preference number: 6 (lower is better)
Translates to: PTGLTIAAGFCILCQ*CTSSSNQTVMGQLL
Trigger: CAGGAGTTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS GCA 72 bp CTCTCCATGGAACAGGTTCTGGTAACATTAGCCGACTaGATTCTGAGGCTTCAGTCACGGGAAGGAGGGACA +
Preference number: 6 (lower is better)
Translates to: LSMEQVLVTLAD*ILRLQSREGGT
Trigger: TGTCCCTCCTTCCCGTGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTACCAGAACCTGTTCCATGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442160.7
ENST00000615736.4
CDS GCA 72 bp AGTGGCAAGGAAAATGCCGACGGGCCTCACCATTGCTaGTGGTTTTTGCATTCTTTGCCAGTTGTGCACGAG +
Preference number: 6 (lower is better)
Translates to: SGKENADGPHHC*WFLHSLPVVHE
Trigger: CTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGGCATTTTCCTTGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS CCA 72 bp TTTCTGTACAGTCTGAGCTCTCGTCTCCTCTCCGTCTaGACCCACATTCACCCGAAGGCTTCTCAAAACAGC +
Preference number: 6 (lower is better)
Translates to: FLYSLSSRLLSV*THIHPKASQNS
Trigger: GCTGTTTTGAGAAGCCTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACGAGAGCTCAGACTGTACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000541357.6
ENST00000554582.5
ENST00000555044.6
ENST00000555602.6
ENST00000555730.6
ENST00000556396.5
ENST00000556659.5
ENST00000556797.1
ENST00000557495.5
ENST00000615736.4
CDS TCA 72 bp TCTACAAGCCCCTGTCCCAATGGGATGGACGTATTCTaGACAAACTGTACCAGGAGCTTCCAGTTCCGGGAA +
Preference number: 6 (lower is better)
Translates to: STSPCPNGMDVF*TNCTRSFQFRE
Trigger: TTCCCGGAACTGGAAGCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCCATTGGGACAGGGGCTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555602.6
ENST00000555730.6
CDS GCA 72 bp AAAATGCCGACGGGCCTCACCATTGCTGCTGGTTTTTaGATTCTTTGCCAGTTGTGCACGAGTAGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: KMPTGLTIAAGF*ILCQLCTSSSN
Trigger: ATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS GCA 72 bp AATAGTGGCAAGGAAAATGCCGACGGGCCTCACCATTaGTGCTGGTTTTTGCATTCTTTGCCAGTTGTGCAC +
Preference number: 6 (lower is better)
Translates to: NSGKENADGPHH*CWFLHSLPVVH
Trigger: GTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAGGCCCGTCGGCATTTTCCTTGCCACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS CAA 90 bp AGGAGCGGTCATTTCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAATCAAACTGTCATGGGCCAACTCCTG +
Preference number: 6 (lower is better)
Translates to: RSGHFIAAGFCILCQ*CTSSSNQTVMGQLL
Trigger: CAGGAGTTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGAAATGACCGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541357.6
CDS TCA 72 bp GGGAAGGAGGGACAAGCAAGTAATATCTTTAGCTTCTaGTTCTACAAGCCCCTGTCCCAATGGGATGGACGT +
Preference number: 6 (lower is better)
Translates to: GKEGQASNIFSF*FYKPLSQWDGR
Trigger: ACGTCCATCCCATTGGGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATTACTTGCTTGTCCCTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000540593.5
ENST00000541357.6
ENST00000554582.5
ENST00000554797.3
ENST00000555044.6
ENST00000555602.6
ENST00000555730.6
ENST00000556160.5
ENST00000556396.5
ENST00000556659.5
ENST00000556797.1
ENST00000557495.5
ENST00000615736.4
CDS TCA 72 bp TCTACAAGCCCCTGTCCCAATGGGATGGACGTATTCTaGACAAACTGTACCAGGAGCTCTGGTTTGGATTCT +
Preference number: 6 (lower is better)
Translates to: STSPCPNGMDVF*TNCTRSSGLDS
Trigger: AGAATCCAAACCAGAGCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCCATTGGGACAGGGGCTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000540593.5
ENST00000554582.5
ENST00000554797.3
ENST00000555044.6
ENST00000556160.5
ENST00000556396.5
ENST00000556659.5
ENST00000615736.4
CDS GCA 72 bp CCTGAATCTTCTGCCTCATCCTGTACAAACACTAAGTaGTCAGCTGAAGAGCCCAGACCTGGTAACATTAGC +
Preference number: 6 (lower is better)
Translates to: PESSASSCTNTK*SAEEPRPGNIS
Trigger: GCTAATGTTACCAGGTCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACAGGATGAGGCAGAAGATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540593.5
CDS GCA 72 bp AGAAACCCAGAGAATGTTAAACTGAACATAAGCAGCTaGTCCTTTTCCCATTCCGCACCTTCCCAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: RNPENVKLNISS*SFSHSAPSQPL
Trigger: GAGAGGCTGGGAAGGTGCGGAATGGGAAAAGGAGCAGCTGCTTATGTTCAGTTTAACATTCTCTGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS CCA 72 bp AAATACTATGCTCTTCCCGTAAGATGTTGTACTAGGTaGGTAATCAATGTAACCGAGGAGGGGTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: KYYALPVRCCTR*VINVTEEGWPG
Trigger: GCCTGGCCACCCCTCCTCGGTTACATTGATTACCCACCTAGTACAACATCTTACGGGAAGAGCATAGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412490.7
CDS CAA 72 bp CTCACCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAATCAAACTGTCATGGGC +
Preference number: 6 (lower is better)
Translates to: LTIAAGFCILCQ*CTSSSNQTVMG
Trigger: GCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS TCA 72 bp TCTACAAGCCCCTGTCCCAATGGGATGGACGTATTCTaGACAAACTGTACCAGGAGCTTCCTGTTATGTTCA +
Preference number: 6 (lower is better)
Translates to: STSPCPNGMDVF*TNCTRSFLLCS
Trigger: TGAACATAACAGGAAGCTCCTGGTACAGTTTGTTCAGAATACGTCCATCCCATTGGGACAGGGGCTTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334521.8
ENST00000541357.6
CDS GCA 72 bp ACCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAAACTGTCATGGGCCAA +
Preference number: 6 (lower is better)
Translates to: TIAAGFCILCQL*TSSSNQTVMGQ
Trigger: TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS GCA 72 bp TTTTACTGGGTACTGAAGCCTCTTCAAGCAAACTACTaGCCATTAGTGGCTCAGCTGAGTGAACCACCAGAT +
Preference number: 6 (lower is better)
Translates to: FYWVLKPLQANY*PLVAQLSEPPD
Trigger: ATCTGGTGGTTCACTCAGCTGAGCCACTAATGGGCAGTAGTTTGCTTGAAGAGGCTTCAGTACCCAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557679.5
CDS CCA 72 bp ACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTaGTTTAGTAACTGTAGTAGCAGCTACTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: THAHVRLSVKSP*FSNCSSSYSGG
Trigger: GCCTCCTGAGTAGCTGCTACTACAGTTACTAAACCAAGGAGATTTAACTGAAAGACGGACATGAGCGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442160.7
CDS CAA 72 bp ACAACTCAAACCAGCCACTGCATTACCAAAATCTCTTaGCACAGAATAGTGGCAAGGAAAATGCCGACGGGC +
Preference number: 6 (lower is better)
Translates to: TTQTSHCITKIS*HRIVARKMPTG
Trigger: GCCCGTCGGCATTTTCCTTGCCACTATTCTGTGCAAAGAGATTTTGGTAATGCAGTGGCTGGTTTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS GCA 72 bp TTCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTTGTaGACGAGTAGCAGCAATCAAACTGTCATGGGCCAA +
Preference number: 6 (lower is better)
Translates to: FIAAGFCILCQL*TSSSNQTVMGQ
Trigger: TTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541357.6
CDS CCA 72 bp CCTTCGATGAGTCTTGAGGTGGTATTTAAAGTGAGCTaGCCATACAAATGTCCGGTCACAACCTTCAACTGT +
Preference number: 6 (lower is better)
Translates to: PSMSLEVVFKVS*PYKCPVTTFNC
Trigger: ACAGTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTCAAGACTCATCGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398139.7
ENST00000639051.1
CDS CAA 72 bp CATTTCATTGCTGCTGGTTTTTGCATTCTTTGCCAGTaGTGCACGAGTAGCAGCAATCAAACTGTCATGGGC +
Preference number: 6 (lower is better)
Translates to: HFIAAGFCILCQ*CTSSSNQTVMG
Trigger: GCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGCAGCAATGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541357.6
CDS CAA 72 bp CCTCAAGGATTTCAATCCTGTGTTCCTAATATCCCCTaGTCATATTCCCTGCCACCCTCTTTAGGGTCATCA +
Preference number: 6 (lower is better)
Translates to: PQGFQSCVPNIP*SYSLPPSLGSS
Trigger: TGATGACCCTAAAGAGGGTGGCAGGGAATATGACAAGGGGATATTAGGAACACAGGATTGAAATCCTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS GCA 72 bp GTGCTTCAACTGCCTACAGTATTCAGTACAGTAACATaGTGTATAGGTTTGCAGCCTAGGGGCAATAAGGTA +
Preference number: 6 (lower is better)
Translates to: VLQLPTVFSTVT*CIGLQPRGNKV
Trigger: TACCTTATTGCCCCTAGGCTGCAAACCTATACAGCATGTTACTGTACTGAATACTGTAGGCAGTTGAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS CCA 72 bp AAATACTATGCTCTTCCCGTAAGATGTTGTACTAGGTaGGTAATCAATGTAACCTTCCAGTTCCGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: KYYALPVRCCTR*VINVTFQFREA
Trigger: GGCTTCCCGGAACTGGAAGGTTACATTGATTACCCACCTAGTACAACATCTTACGGGAAGAGCATAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000442160.7
ENST00000540593.5
ENST00000541357.6
ENST00000555044.6
ENST00000556396.5
ENST00000557495.5
CDS CCA 72 bp AAATACTATGCTCTTCCCGTAAGATGTTGTACTAGGTaGGTAATCAATGTAACCTCGGAGCTCACCTTCCAG +
Preference number: 6 (lower is better)
Translates to: KYYALPVRCCTR*VINVTSELTFQ
Trigger: CTGGAAGGTGAGCTCCGAGGTTACATTGATTACCCACCTAGTACAACATCTTACGGGAAGAGCATAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556659.5
CDS CAA 72 bp CCTACAGTATTCAGTACAGTAACATGCTGTATAGGTTaGCAGCCTAGGGGCAATAAGGTATACCATACAGCC +
Preference number: 6 (lower is better)
Translates to: PTVFSTVTCCIG*QPRGNKVYHTA
Trigger: GGCTGTATGGTATACCTTATTGCCCCTAGGCTGCAAACCTATACAGCATGTTACTGTACTGAATACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS CAA 90 bp ATGTGCTTTCCTCAAGGATTTCAATCCTGTGTTCCTAATATCCCCTaGTCATATTCCCTGCCACCCTCTTTAGGGTCATCAACATTCACA +
Preference number: 6 (lower is better)
Translates to: MCFPQGFQSCVPNIP*SYSLPPSLGSSTFT
Trigger: TGTGAATGTTGATGACCCTAAAGAGGGTGGCAGGGAATATGACAAGGGGATATTAGGAACACAGGATTGAAATCCTTGAGGAAAGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556179.5
CDS CAA 72 bp GGAGCTCTGGTTTGGATTCTAACTCATCTGATAACATaGATTCAGCTTCCAAAACCTGTAGCTATTCAGGGG +
Preference number: 6 (lower is better)
Translates to: GALVWILTHLIT*IQLPKPVAIQG
Trigger: CCCCTGAATAGCTACAGGTTTTGGAAGCTGAATCAATGTTATCAGATGAGTTAGAATCCAAACCAGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000540593.5
ENST00000554582.5
ENST00000554797.3
ENST00000555044.6
ENST00000556160.5
ENST00000556396.5
ENST00000556659.5
CDS CAA 72 bp AGTTCTTCCATAACATCATCAACTCCCAGGATAGAATaGGTATTTGGTAGGTTCAAGGACTCTCCACCAAGG +
Preference number: 6 (lower is better)
Translates to: SSSITSSTPRIE*VFGRFKDSPPR
Trigger: CCTTGGTGGAGAGTCCTTGAACCTACCAAATACCAATTCTATCCTGGGAGTTGATGATGTTATGGAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557679.5
CDS CAA 90 bp ACTGTACCAGGAGCTCTGGTTTGGATTCTAACTCATCTGATAACATaGATTCAGCTTCCAAAACCTGTAGCTATTCAGGGGACAAGTTCA +
Preference number: 6 (lower is better)
Translates to: TVPGALVWILTHLIT*IQLPKPVAIQGTSS
Trigger: TGAACTTGTCCCCTGAATAGCTACAGGTTTTGGAAGCTGAATCAATGTTATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000324593.10
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000540593.5
ENST00000554582.5
ENST00000554797.3
ENST00000555044.6
ENST00000556160.5
ENST00000556396.5
ENST00000556659.5
CDS CAA 90 bp AAATTATATACAACTCAAACCAGCCACTGCATTACCAAAATCTCTTaGCACAGAATAGTGGCAAGGAAAATGCCGACGGGCCTCACCATT +
Preference number: 6 (lower is better)
Translates to: KLYTTQTSHCITKIS*HRIVARKMPTGLTI
Trigger: AATGGTGAGGCCCGTCGGCATTTTCCTTGCCACTATTCTGTGCAAAGAGATTTTGGTAATGCAGTGGCTGGTTTGAGTTGTATATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS TCA 72 bp TTCCTAAAATCTATGAATGGCAGAGGTTCTGATACCTaGGTGAACCACCAGATGTTTTCGGAGGCTAGAATA +
Preference number: 6 (lower is better)
Translates to: FLKSMNGRGSDT*VNHQMFSEARI
Trigger: TATTCTAGCCTCCGAAAACATCTGGTGGTTCACTCAGGTATCAGAACCTCTGCCATTCATAGATTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412490.7
CDS CAA 90 bp TCTCTAGTCATCTCTTCTGAACTCCAAACCTTCATTTCTAACTGCTaGCTAGGTATCTCCACATGTATATCCAACAGCATCTCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SLVISSELQTFISNC*LGISTCISNSISNR
Trigger: CCTGTTTGAGATGCTGTTGGATATACATGTGGAGATACCTAGCAAGCAGTTAGAAATGAAGGTTTGGAGTTCAGAAGAGATGACTAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556160.5
CDS CAA 90 bp TCTCTAGTCATCTCTTCTGAACTCCAAACCTTCATTTCTAACTGCTaGCTAGGTATCTCCACATGTATATCCAACAGCATCTCAAACCTA +
Preference number: 6 (lower is better)
Translates to: SLVISSELQTFISNC*LGISTCISNSISNL
Trigger: TAGGTTTGAGATGCTGTTGGATATACATGTGGAGATACCTAGCAAGCAGTTAGAAATGAAGGTTTGGAGTTCAGAAGAGATGACTAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554582.5
CDS CCA 72 bp AAAAGGTTGCAGATGATTCTACTGTATAGCTATGTTTaGAAACCATCAGCCCATCAAATGAGACCAGGTCTA +
Preference number: 6 (lower is better)
Translates to: KRLQMILLYSYV*KPSAHQMRPGL
Trigger: TAGACCTGGTCTCATTTGATGGGCTGATGGTTTCCAAACATAGCTATACAGTAGAATCATCTGCAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555620.1
CDS CAA 72 bp ATCTCTTCTGAACTCCAAACCTTCATTTCTAACTGCTaGCTAGGTATCTCCACATGTATATCCAACAGCATC +
Preference number: 6 (lower is better)
Translates to: ISSELQTFISNC*LGISTCISNSI
Trigger: GATGCTGTTGGATATACATGTGGAGATACCTAGCAAGCAGTTAGAAATGAAGGTTTGGAGTTCAGAAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554582.5
ENST00000556160.5
CDS CAA 72 bp AACACTCTGGTTTGGATTCTAACTCATCTGATAACATaGATTCAGCTTCCAAAACCTGTAGCTATTCAGGGG +
Preference number: 6 (lower is better)
Translates to: NTLVWILTHLIT*IQLPKPVAIQG
Trigger: CCCCTGAATAGCTACAGGTTTTGGAAGCTGAATCAATGTTATCAGATGAGTTAGAATCCAAACCAGAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557495.5
CDS CAA 90 bp GGTATACCATACAGCCTAGAGTGTAGCAGGCTAAACCATACAGGTTaGTGTAAGTATACTCTACCATGTTCGCATAATAATGATATCAAC +
Preference number: 6 (lower is better)
Translates to: GIPYSLECSRLNHTG*CKYTLPCSHNNDIN
Trigger: GTTGATATCATTATTATGCGAACATGGTAGAGTATACTTACACAAACCTGTATGGTTTAGCCTGCTACACTCTAGGCTGTATGGTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS TCA 72 bp AGAGAGCCCTTTCTTTTCTCCAGAAGATATGGCTTTTaGAGGTATGGAGAAATTGCTTTATATCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: REPFLFSRRYGF*RYGEIALYLLC
Trigger: ACAGAGGAGATATAAAGCAATTTCTCCATACCTTCAAAAGCCATATCTTCTGGAGAAAAGAAAGGGCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557679.5
CDS GCA 72 bp AGAATAAAAGAAGTGCTATCACTTGGCTGTAGATCTTaGAACAAGCTAGAAGACTCTGAAGTGGACAAAAAC +
Preference number: 6 (lower is better)
Translates to: RIKEVLSLGCRS*NKLEDSEVDKN
Trigger: GTTTTTGTCCACTTCAGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAGTGATAGCACTTCTTTTATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000324593.10
ENST00000334521.8
ENST00000398139.7
ENST00000412490.7
ENST00000442160.7
ENST00000541357.6
ENST00000554582.5
ENST00000555044.6
ENST00000555602.6
ENST00000555730.6
ENST00000556396.5
ENST00000556659.5
ENST00000556797.1
ENST00000615736.4
CDS CAA 72 bp TACAGCCTAGAGTGTAGCAGGCTAAACCATACAGGTTaGTGTAAGTATACTCTACCATGTTCGCATAATAAT +
Preference number: 6 (lower is better)
Translates to: YSLECSRLNHTG*CKYTLPCSHNN
Trigger: ATTATTATGCGAACATGGTAGAGTATACTTACACAAACCTGTATGGTTTAGCCTGCTACACTCTAGGCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556797.1
CDS CAA 72 bp TTCACAATTGACAAACACATGGTACAGCAATCATCATaGCTGATTGTATTTTGCTGGGAATGCAAAATACAA +
Preference number: 6 (lower is better)
Translates to: FTIDKHMVQQSS*LIVFCWECKIQ
Trigger: TTGTATTTTGCATTCCCAGCAAAATACAATCAGCAATGATGATTGCTGTACCATGTGTTTGTCAATTGTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556179.5