Pregenerated sensors for ZNF408 (Homo sapiens)
Ensembl gene IDs: ENSG00000175213Ensembl transcript IDs: ENST00000311764.3, ENST00000526410.1, ENST00000527008.1, ENST00000531866.1, ENST00000534481.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATGGGCAAGGGGCAGGGGCAGCTGGCACCTGGTGGGTCTTGCGATaGAGCCGCAGGGAGGGCCGGCGGGCAAAGGCCTTGCCACACTGG | + |
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Preference number: 5 (lower is better) Translates to: HGQGAGAAGTWWVLR*SRREGRRAKALPHW Trigger: CCAGTGTGGCAAGGCCTTTGCCCGCCGGCCCTCCCTGCGGCTGCATCGCAAGACCCACCAGGTGCCAGCTGCCCCTGCCCCTTGCCCATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 90 bp | GGTAAGGACGCTCCCCGGTGTGGAGCCGCAAATGCCCACGCAGGTTaGCCCGCTGACGAAACGCCCGGCCACAGTGCGGGCACAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GKDAPRCGAANAHAG*PADETPGHSAGTGK Trigger: CTTTCCTGTGCCCGCACTGTGGCCGGGCGTTTCGTCAGCGGGGCAACCTGCGTGGGCATTTGCGGCTCCACACCGGGGAGCGTCCTTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CTCTCCACACCGGTACCGTCGCCCCTGCTTTGGGGAGCTTCCTGCTaGGCCAGGAGGGCTCCGCGAGAGTGTAGGGAAGCCAGACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSTPVPSPLLWGASC*ARRAPRECREARLL Trigger: CAGCAGTCTGGCTTCCCTACACTCTCGCGGAGCCCTCCTGGCCCAGCAGGAAGCTCCCCAAAGCAGGGGCGACGGTACCGGTGTGGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 90 bp | ACACTCTCCACACCGGTACCGTCGCCCCTGCTTTGGGGAGCTTCCTaGTGGGCCAGGAGGGCTCCGCGAGAGTGTAGGGAAGCCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: TLSTPVPSPLLWGAS*WARRAPRECREARL Trigger: CAGTCTGGCTTCCCTACACTCTCGCGGAGCCCTCCTGGCCCAGCAGGAAGCTCCCCAAAGCAGGGGCGACGGTACCGGTGTGGAGAGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CCACACACCGGGCACAAGTGGGCCTCCCCGGTGTGTGAGATGAGATaGCGCCGCAGTTCAGGCAGCTGGGGGAAGGCATCGGCACAGTGT | + |
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Preference number: 5 (lower is better) Translates to: PHTGHKWASPVCEMR*RRSSGSWGKASAQC Trigger: ACACTGTGCCGATGCCTTCCCCCAGCTGCCTGAACTGCGGCGCCATCTCATCTCACACACCGGGGAGGCCCACTTGTGCCCGGTGTGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CAGGAGCACCACAGTGGGCTCAGAAGCAGCAGAAGGCACAGAGGGTaGGCTGCAGGGTGCCTCAGGCCGGTGACTGAGCTGATGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: QEHHSGLRSSRRHRG*AAGCLRPVTELMPP Trigger: AGGCGGCATCAGCTCAGTCACCGGCCTGAGGCACCCTGCAGCCCACCCTCTGTGCCTTCTGCTGCTTCTGAGCCCACTGTGGTGCTCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | TGCCACAGGTGGGGCAGCGGTAGGGCTTGTCCTCCAAGTGAGATTTaGGGTGGCGCCGCAGCTTGGTGGCCAGCGTGTAAGCACGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: CHRWGSGRACPPSEI*GGAAAWWPACKHGH Trigger: GTGGCCGTGCTTACACGCTGGCCACCAAGCTGCGGCGCCACCTCAAATCTCACTTGGAGGACAAGCCCTACCGCTGCCCCACCTGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 90 bp | GCGAGGATGTCTCGGGTCGGCTCGGGTGGGACGTCTTTGAGGCCCTaGGTACAGCCTTCTCCGGAAGGGTTCCATCCTAAGTCCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ARMSRVGSGGTSLRP*VQPSPEGFHPKSRP Trigger: GGGCCTGGACTTAGGATGGAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGACATCCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS CCA 90 bp | GTGCTCTTTGAGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATTGTaGACAGGGGAAGGGCCGCACCCCACGGTGGCCCAGCATATGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLFEVSLGAIGLVAL*TGEGPHPTVAQHMG Trigger: GCCCATATGCTGGGCCACCGTGGGGTGCGGCCCTTCCCCTGTCCACAATGCGACAAGGCCTATGGCACCCAGCGAGACCTCAAAGAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | GGGCTCCAGGCTCTGGGGTCTTTGCTCTGGGTGGGCACTGATCACTaGGGCTGTGTAACTTCTTGGCCAGGTAGCCATGCGGCTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GLQALGSLLWVGTDH*GCVTSWPGSHAAGC Trigger: GCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACAGCCCCAGTGATCAGTGCCCACCCAGAGCAAAGACCCCAGAGCCTGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CTGCCCAGGCGCCGAGGCCCATGTCCTTATGGATTAGCACCAGGCTaGGGGCGGCATCTGGCTCCTCTGGCACCACAAAGCACTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LPRRRGPCPYGLAPG*GRHLAPLAPQSTSP Trigger: AGGAGAAGTGCTTTGTGGTGCCAGAGGAGCCAGATGCCGCCCCCAGCCTGGTGCTAATCCATAAGGACATGGGCCTCGGCGCCTGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | AGCCTGGCAGCACCAGCTGGTACACTTGCAGATGAAGCCTCTCGCTaGTCCGCACTGGGGCCACATTTCCCTCACTCTCCAGCCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SLAAPAGTLADEASR*SALGPHFPHSPACP Trigger: GGGGCAGGCTGGAGAGTGAGGGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTGCTGCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CCA 90 bp | CAGTGCGGGCACAGGAAAGGCTTTTCTCCTGTATGGAGCCTCATATaGTTCCGCAGGGAGCCCTGGTTGGCCAGGGGCCGCCCACACACA | + |
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Preference number: 5 (lower is better) Translates to: QCGHRKGFSPVWSLI*FRREPWLARGRPHT Trigger: TGTGTGTGGGCGGCCCCTGGCCAACCAGGGCTCCCTGCGGAACCATATGAGGCTCCATACAGGAGAAAAGCCTTTCCTGTGCCCGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | CTGGCTCCACTGCCATCTGGGTCCTGCTGGGTAGCCGAATTGCTCTaGAGTTCAGGTGGCATCTGTGCCTGGGCCGGGCATTCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: LAPLPSGSCWVAELL*SSGGICAWAGHSSS Trigger: GGATGAGGAATGCCCGGCCCAGGCACAGATGCCACCTGAACTTCAGAGCAATTCGGCTACCCAGCAGGACCCAGATGGCAGTGGAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | GCCATCTGGGTCCTGCTGGGTAGCCGAATTGCTCTGAAGTTCAGGTaGCATCTGTGCCTGGGCCGGGCATTCCTCATCCACGTCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: AIWVLLGSRIALKFR*HLCLGRAFLIHVAI Trigger: GATGGCGACGTGGATGAGGAATGCCCGGCCCAGGCACAGATGCCACCTGAACTTCAGAGCAATTCGGCTACCCAGCAGGACCCAGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | GGCATCTGTGCCTGGGCCGGGCATTCCTCATCCACGTCGCCATCCTaGAGCAATGGGCCAAGTGGCTGGCTATCCTTGGAAATTCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GICAWAGHSSSTSPS*SNGPSGWLSLEIRS Trigger: GGACCGAATTTCCAAGGATAGCCAGCCACTTGGCCCATTGCTTCAGGATGGCGACGTGGATGAGGAATGCCCGGCCCAGGCACAGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS GCA 90 bp | CACTGGGGCTGTGTAACTTCTTGGCCAGGTAGCCATGCGGCTGGGTaGCCCTGGCAGAAGATGAGAAACTGGCTCCACTGCCATCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: HWGCVTSWPGSHAAG*PWQKMRNWLHCHLG Trigger: ACCCAGATGGCAGTGGAGCCAGTTTCTCATCTTCTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACAGCCCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | GGCTGTGTAACTTCTTGGCCAGGTAGCCATGCGGCTGGGTGCCCCTaGCAGAAGATGAGAAACTGGCTCCACTGCCATCTGGGTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GCVTSWPGSHAAGCP*QKMRNWLHCHLGPA Trigger: AGCAGGACCCAGATGGCAGTGGAGCCAGTTTCTCATCTTCTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CTGGGGGCGGCATCTGGCTCCTCTGGCACCACAAAGCACTTCTCCTaGCTTTCTGAAATGGTGACCTCAACAACATCCCTGGCGGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGAASGSSGTTKHFS*LSEMVTSTTSLAGE Trigger: CTCCCCCGCCAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTTTGTGGTGCCAGAGGAGCCAGATGCCGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | AGCAGCAGTTCAGAGCCTGGCAGCACCAGCTGGTACACTTGCAGATaGAGCCTCTCGCTGATCCGCACTGGGGCCACATTTCCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: SSSSEPGSTSWYTCR*SLSLIRTGATFPSL Trigger: GAGTGAGGGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTGCTGCCAGGCTCTGAACTGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS TCA 90 bp | GACAGGGGAAGGGCCGCACCCCACGGTGGCCCAGCATATGGGCTTTaGAGCTCTCCTCTGAGCTATAGCTCTTGCCACACTCAGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: DRGRAAPHGGPAYGL*SSPLSYSSCHTQCK Trigger: TTTGCACTGAGTGTGGCAAGAGCTATAGCTCAGAGGAGAGCTTCAAAGCCCATATGCTGGGCCACCGTGGGGTGCGGCCCTTCCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | CACAAGCAAAGGGCCGGGCACCTGAATGTACCACCTGGTGCTCTTTaGGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATTGTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: HKQRAGHLNVPPGAL*GLAGCHRPCRIVDR Trigger: CCTGTCCACAATGCGACAAGGCCTATGGCACCCAGCGAGACCTCAAAGAGCACCAGGTGGTACATTCAGGTGCCCGGCCCTTTGCTTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 90 bp | GCACAAATGCGTGCTTCTTTAGGTGGCACAGCTGTAGGAATGCCTTaGCACACTCTCCACACCGGTACCGTCGCCCCTGCTTTGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: AQMRASLGGTAVGMP*HTLHTGTVAPALGS Trigger: GCTCCCCAAAGCAGGGGCGACGGTACCGGTGTGGAGAGTGTGGCAAGGCATTCCTACAGCTGTGCCACCTAAAGAAGCACGCATTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | CACCAGCTGGTACACTTGCAGATGAAGCCTCTCGCTGATCCGCACTaGGGCCACATTTCCCTCACTCTCCAGCCTGCCCCGTTGTACCAA | + |
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Preference number: 5 (lower is better) Translates to: HQLVHLQMKPLADPH*GHISLTLQPAPLYQ Trigger: TTGGTACAACGGGGCAGGCTGGAGAGTGAGGGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CCA 90 bp | TCTTTGCTCTGGGTGGGCACTGATCACTGGGGCTGTGTAACTTCTTaGCCAGGTAGCCATGCGGCTGGGTGCCCCTGGCAGAAGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLLWVGTDHWGCVTS*PGSHAAGCPWQKMR Trigger: TCTCATCTTCTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACAGCCCCAGTGATCAGTGCCCACCCAGAGCAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | AGGGCGGAGGGAAGTCGCTCTATCCTTCAATACCTCCTCCTGCCGTaGCTTTACTCCCTCGCCCTTCTCCTTGGAGGCAGACTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RAEGSRSILQYLLLP*LYSLALLLGGRLLF Trigger: GAAGAGGAGTCTGCCTCCAAGGAGAAGGGCGAGGGAGTAAAGCCACGGCAGGAGGAGGTATTGAAGGATAGAGCGACTTCCCTCCGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531866.1 |
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| CDS TCA 90 bp | TCTTTAAAGCGAGGATGTCTCGGGTCGGCTCGGGTGGGACGTCTTTaGGGCCCTGCGTACAGCCTTCTCCGGAAGGGTTCCATCCTAAGT | + |
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Preference number: 5 (lower is better) Translates to: SLKRGCLGSARVGRL*GPAYSLLRKGSILS Trigger: ACTTAGGATGGAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGACATCCTCGCTTTAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS GCA 90 bp | TTCCTGCTGTACAGCAGACTCCACTTCTGTCACCACTGCTACAGCTaGCTCTTTGTCCAGCCCAGGCTGGGTGAGACTTGGGCCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: FLLYSRLHFCHHCYS*LFVQPRLGETWALR Trigger: TCTGAGGGCCCAAGTCTCACCCAGCCTGGGCTGGACAAAGAGGCAGCTGTAGCAGTGGTGACAGAAGTGGAGTCTGCTGTACAGCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS GCA 90 bp | TTTCAAGGGCGGAGGGAAGTCGCTCTATCCTTCAATACCTCCTCCTaGCGTGGCTTTACTCCCTCGCCCTTCTCCTTGGAGGCAGACTCC | + |
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Preference number: 5 (lower is better) Translates to: FQGRREVALSFNTSS*RGFTPSPFSLEADS Trigger: GGAGTCTGCCTCCAAGGAGAAGGGCGAGGGAGTAAAGCCACGGCAGGAGGAGGTATTGAAGGATAGAGCGACTTCCCTCCGCCCTTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531866.1 |
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| CDS TCA 90 bp | CCGCACCCCACGGTGGCCCAGCATATGGGCTTTGAAGCTCTCCTCTaGGCTATAGCTCTTGCCACACTCAGTGCAAAGAAAGGGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: PHPTVAQHMGFEALL*AIALATLSAKKGLV Trigger: CACAAGCCCTTTCTTTGCACTGAGTGTGGCAAGAGCTATAGCTCAGAGGAGAGCTTCAAAGCCCATATGCTGGGCCACCGTGGGGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 90 bp | GCTCCTCTGGCACCACAAAGCACTTCTCCTGGCTTTCTGAAATGGTaGCCTCAACAACATCCCTGGCGGGGGAGACTTCCTCCTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: APLAPQSTSPGFLKW*PQQHPWRGRLPPLC Trigger: ACAGAGAGGAGGAAGTCTCCCCCGCCAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTTTGTGGTGCCAGAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 90 bp | GGAACGACACACTCTCCTCTGACTTACCTAGTCCAGCCAGAACTCTaGTCACAGGCACACACGTCTCCCCATGGGCCTAATGACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GTTHSPLTYLVQPEL*SQAHTSPHGPNDRF Trigger: GAACCTGTCATTAGGCCCATGGGGAGACGTGTGTGCCTGTGAGCAGAGTTCTGGCTGGACTAGGTAAGTCAGAGGAGAGTGTGTCGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526410.1 |
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| CDS CCA 90 bp | CGGGCATTCCTCATCCACGTCGCCATCCTGAAGCAATGGGCCAAGTaGCTGGCTATCCTTGGAAATTCGGTCCTGGGTTGGGAACTTAAG | + |
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Preference number: 5 (lower is better) Translates to: RAFLIHVAILKQWAK*LAILGNSVLGWELK Trigger: CTTAAGTTCCCAACCCAGGACCGAATTTCCAAGGATAGCCAGCCACTTGGCCCATTGCTTCAGGATGGCGACGTGGATGAGGAATGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS GCA 90 bp | CACTCAGTGCAAAGAAAGGGCTTGTGGCCCGTGTGCACAAATGCGTaGTTCTTTAGGTGGCACAGCTGTAGGAATGCCTTGCCACACTCT | + |
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Preference number: 5 (lower is better) Translates to: HSVQRKGLWPVCTNA*FFRWHSCRNALPHS Trigger: AGAGTGTGGCAAGGCATTCCTACAGCTGTGCCACCTAAAGAAGCACGCATTTGTGCACACGGGCCACAAGCCCTTTCTTTGCACTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 90 bp | TCCTGGGTTGGGAACTTAAGTCCAGGGCTCACCATATTCTCTGCCTaGATGCCAGAGGGTGACTGGGAACCAGGATCTATGCAAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SWVGNLSPGLTIFSA*MPEGDWEPGSMQGS Trigger: AGAACCTTGCATAGATCCTGGTTCCCAGTCACCCTCTGGCATCCAGGCAGAGAATATGGTGAGCCCTGGACTTAAGTTCCCAACCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS TCA 90 bp | AGCTTTCAACAACTTTTCAAACCTCGATTCTTTAACTACTGCTGCTaGGAGGAGACAGTCCTGAAGAGAAGGGACAAGACTATCTCCTAT | + |
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Preference number: 5 (lower is better) Translates to: SFQQLFKPRFFNYCC*EETVLKRRDKTISY Trigger: ATAGGAGATAGTCTTGTCCCTTCTCTTCAGGACTGTCTCCTCTCAGCAGCAGTAGTTAAAGAATCGAGGTTTGAAAAGTTGTTGAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531866.1 |
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| CDS GCA 72 bp | GGGGCAGGGGCAGCTGGCACCTGGTGGGTCTTGCGATaGAGCCGCAGGGAGGGCCGGCGGGCAAAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GAGAAGTWWVLR*SRREGRRAKAL Trigger: CAAGGCCTTTGCCCGCCGGCCCTCCCTGCGGCTGCATCGCAAGACCCACCAGGTGCCAGCTGCCCCTGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | GCTCCCCGGTGTGGAGCCGCAAATGCCCACGCAGGTTaGCCCGCTGACGAAACGCCCGGCCACAGTGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: APRCGAANAHAG*PADETPGHSAG Trigger: GCCCGCACTGTGGCCGGGCGTTTCGTCAGCGGGGCAACCTGCGTGGGCATTTGCGGCTCCACACCGGGGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | CGTGAGCTCGGAGCGTGTGTGGGTCTCGGAGGGCCTTaGCACACACCGGGCACAAGTGGGCCTCCCCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RELGACVGLGGP*HTPGTSGPPRC Trigger: ACACCGGGGAGGCCCACTTGTGCCCGGTGTGTGGCAAGGCCCTCCGAGACCCACACACGCTCCGAGCTCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | CCGGTACCGTCGCCCCTGCTTTGGGGAGCTTCCTGCTaGGCCAGGAGGGCTCCGCGAGAGTGTAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVPSPLLWGASC*ARRAPRECREA Trigger: GGCTTCCCTACACTCTCGCGGAGCCCTCCTGGCCCAGCAGGAAGCTCCCCAAAGCAGGGGCGACGGTACCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | GCCACACACCGGGCACAAGTGGGCCTCCCCGGTGTGTaGGATGAGATGGCGCCGCAGTTCAGGCAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ATHRAQVGLPGV*DEMAPQFRQLG Trigger: CCCCAGCTGCCTGAACTGCGGCGCCATCTCATCTCACACACCGGGGAGGCCCACTTGTGCCCGGTGTGTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | GCCTTGCCACACTCTCCACACCGGTACCGTCGCCCCTaGTTTGGGGAGCTTCCTGCTGGGCCAGGAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ALPHSPHRYRRP*FGELPAGPGGL Trigger: GAGCCCTCCTGGCCCAGCAGGAAGCTCCCCAAAGCAGGGGCGACGGTACCGGTGTGGAGAGTGTGGCAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | GAGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATTGTaGACAGGGGAAGGGCCGCACCCCACGGTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: EVSLGAIGLVAL*TGEGPHPTVAQ Trigger: CTGGGCCACCGTGGGGTGCGGCCCTTCCCCTGTCCACAATGCGACAAGGCCTATGGCACCCAGCGAGACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | TCCGGAGTGCAGGCGCTCGTGAGCTCGGAGCGTGTGTaGGTCTCGGAGGGCCTTGCCACACACCGGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: SGVQALVSSERV*VSEGLATHRAQ Trigger: TTGTGCCCGGTGTGTGGCAAGGCCCTCCGAGACCCACACACGCTCCGAGCTCACGAGCGCCTGCACTCCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | GTGTGGAGCCGCAAATGCCCACGCAGGTTGCCCCGCTaGCGAAACGCCCGGCCACAGTGCGGGCACAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VWSRKCPRRLPR*RNARPQCGHRK Trigger: TTTCCTGTGCCCGCACTGTGGCCGGGCGTTTCGTCAGCGGGGCAACCTGCGTGGGCATTTGCGGCTCCACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | GGGCACAAGTGGGCCTCCCCGGTGTGTGAGATGAGATaGCGCCGCAGTTCAGGCAGCTGGGGGAAGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: GHKWASPVCEMR*RRSSGSWGKAS Trigger: CGATGCCTTCCCCCAGCTGCCTGAACTGCGGCGCCATCTCATCTCACACACCGGGGAGGCCCACTTGTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | CGAGGATGTCTCGGGTCGGCTCGGGTGGGACGTCTTTaGGGCCCTGCGTACAGCCTTCTCCGGAAGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RGCLGSARVGRL*GPAYSLLRKGS Trigger: GGAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGACATCCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS GCA 72 bp | CCAGGAGGGCTCCGCGAGAGTGTAGGGAAGCCAGACTaGTGGGCTCCAGGCTCTGGGGTCTTTGCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PGGLRESVGKPD*WAPGSGVFALG Trigger: ACCCAGAGCAAAGACCCCAGAGCCTGGAGCCCAGCAGTCTGGCTTCCCTACACTCTCGCGGAGCCCTCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CAA 72 bp | GCGAGGATGTCTCGGGTCGGCTCGGGTGGGACGTCTTaGAGGCCCTGCGTACAGCCTTCTCCGGAAGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ARMSRVGSGGTS*RPCVQPSPEGF Trigger: GAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGACATCCTCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS CAA 72 bp | TTTGAGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATaGTGGACAGGGGAAGGGCCGCACCCCACGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FEVSLGAIGLVA*WTGEGPHPTVA Trigger: GGCCACCGTGGGGTGCGGCCCTTCCCCTGTCCACAATGCGACAAGGCCTATGGCACCCAGCGAGACCTCAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | TGGGTGGGCACTGATCACTGGGGCTGTGTAACTTCTTaGCCAGGTAGCCATGCGGCTGGGTGCCCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WVGTDHWGCVTS*PGSHAAGCPWQ Trigger: CTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACAGCCCCAGTGATCAGTGCCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | CGCCGAGGCCCATGTCCTTATGGATTAGCACCAGGCTaGGGGCGGCATCTGGCTCCTCTGGCACCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRGPCPYGLAPG*GRHLAPLAPQS Trigger: GCTTTGTGGTGCCAGAGGAGCCAGATGCCGCCCCCAGCCTGGTGCTAATCCATAAGGACATGGGCCTCGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CAA 90 bp | CTGGTGCTCTTTGAGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATaGTGGACAGGGGAAGGGCCGCACCCCACGGTGGCCCAGCATATG | + |
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Preference number: 6 (lower is better) Translates to: LVLFEVSLGAIGLVA*WTGEGPHPTVAQHM Trigger: CATATGCTGGGCCACCGTGGGGTGCGGCCCTTCCCCTGTCCACAATGCGACAAGGCCTATGGCACCCAGCGAGACCTCAAAGAGCACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | TGGGGCAGCGGTAGGGCTTGTCCTCCAAGTGAGATTTaGGGTGGCGCCGCAGCTTGGTGGCCAGCGTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: WGSGRACPPSEI*GGAAAWWPACK Trigger: CTTACACGCTGGCCACCAAGCTGCGGCGCCACCTCAAATCTCACTTGGAGGACAAGCCCTACCGCTGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | TCTCGGGTCGGCTCGGGTGGGACGTCTTTGAGGCCCTaGGTACAGCCTTCTCCGGAAGGGTTCCATCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SRVGSGGTSLRP*VQPSPEGFHPK Trigger: CTTAGGATGGAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS CCA 72 bp | TCGCATTGTGGACAGGGGAAGGGCCGCACCCCACGGTaGCCCAGCATATGGGCTTTGAAGCTCTCCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SHCGQGKGRTPR*PSIWALKLSSE Trigger: CTCAGAGGAGAGCTTCAAAGCCCATATGCTGGGCCACCGTGGGGTGCGGCCCTTCCCCTGTCCACAATGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CAA 90 bp | GGGCCACAGCAGCAGTTCAGAGCCTGGCAGCACCAGCTGGTACACTaGCAGATGAAGCCTCTCGCTGATCCGCACTGGGGCCACATTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPQQQFRAWQHQLVH*QMKPLADPHWGHIS Trigger: GGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTGCTGCCAGGCTCTGAACTGCTGCTGTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CAA 90 bp | GAGCCCGAGGGACAGGTGAGGGCTCTAAGGAGGGCCCTGAAAGTTTaGAGGAGGCTCAAGGGCTCTTCAGAAGCCCCCAGCGACTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EPEGQVRALRRALKV*RRLKGSSEAPSDSE Trigger: CTCAGAGTCGCTGGGGGCTTCTGAAGAGCCCTTGAGCCTCCTCAAAACTTTCAGGGCCCTCCTTAGAGCCCTCACCTGTCCCTCGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534481.1 |
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| CDS CCA 72 bp | GTACACTTGCAGATGAAGCCTCTCGCTGATCCGCACTaGGGCCACATTTCCCTCACTCTCCAGCCTGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: VHLQMKPLADPH*GHISLTLQPAP Trigger: CGGGGCAGGCTGGAGAGTGAGGGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CCA 72 bp | CACAGGAAAGGCTTTTCTCCTGTATGGAGCCTCATATaGTTCCGCAGGGAGCCCTGGTTGGCCAGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: HRKGFSPVWSLI*FRREPWLARGR Trigger: GCGGCCCCTGGCCAACCAGGGCTCCCTGCGGAACCATATGAGGCTCCATACAGGAGAAAAGCCTTTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | AGGGCCGCACCCCACGGTGGCCCAGCATATGGGCTTTaGAGCTCTCCTCTGAGCTATAGCTCTTGCCACACT | + |
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Preference number: 6 (lower is better) Translates to: RAAPHGGPAYGL*SSPLSYSSCHT Trigger: AGTGTGGCAAGAGCTATAGCTCAGAGGAGAGCTTCAAAGCCCATATGCTGGGCCACCGTGGGGTGCGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | AGGGCCGGGCACCTGAATGTACCACCTGGTGCTCTTTaGGGTCTCGCTGGGTGCCATAGGCCTTGTCGCATT | + |
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Preference number: 6 (lower is better) Translates to: RAGHLNVPPGAL*GLAGCHRPCRI Trigger: AATGCGACAAGGCCTATGGCACCCAGCGAGACCTCAAAGAGCACCAGGTGGTACATTCAGGTGCCCGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | GGTAGCCGAATTGCTCTGAAGTTCAGGTGGCATCTGTaGCTGGGCCGGGCATTCCTCATCCACGTCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: GSRIALKFRWHL*LGRAFLIHVAI Trigger: GATGGCGACGTGGATGAGGAATGCCCGGCCCAGGCACAGATGCCACCTGAACTTCAGAGCAATTCGGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | CGTGCTTCTTTAGGTGGCACAGCTGTAGGAATGCCTTaGCACACTCTCCACACCGGTACCGTCGCCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RASLGGTAVGMP*HTLHTGTVAPA Trigger: AGCAGGGGCGACGGTACCGGTGTGGAGAGTGTGGCAAGGCATTCCTACAGCTGTGCCACCTAAAGAAGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | ACTTCTTGGCCAGGTAGCCATGCGGCTGGGTGCCCCTaGCAGAAGATGAGAAACTGGCTCCACTGCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TSWPGSHAAGCP*QKMRNWLHCHL Trigger: CAGATGGCAGTGGAGCCAGTTTCTCATCTTCTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CAA 72 bp | GGACAGGTGAGGGCTCTAAGGAGGGCCCTGAAAGTTTaGAGGAGGCTCAAGGGCTCTTCAGAAGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQVRALRRALKV*RRLKGSSEAPS Trigger: GCTGGGGGCTTCTGAAGAGCCCTTGAGCCTCCTCAAAACTTTCAGGGCCCTCCTTAGAGCCCTCACCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534481.1 |
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| CDS CAA 90 bp | CTCTTTAAAGCGAGGATGTCTCGGGTCGGCTCGGGTGGGACGTCTTaGAGGCCCTGCGTACAGCCTTCTCCGGAAGGGTTCCATCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: LFKARMSRVGSGGTS*RPCVQPSPEGFHPK Trigger: CTTAGGATGGAACCCTTCCGGAGAAGGCTGTACGCAGGGCCTCAAAGACGTCCCACCCGAGCCGACCCGAGACATCCTCGCTTTAAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311764.3 ENST00000526410.1 ENST00000531866.1 ENST00000534481.1 |
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| CDS CAA 90 bp | TGTACAGCAGACTCCACTTCTGTCACCACTGCTACAGCTGCCTCTTaGTCCAGCCCAGGCTGGGTGAGACTTGGGCCCTCAGAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: CTADSTSVTTATAAS*SSPGWVRLGPSEEG Trigger: GCCTTCCTCTGAGGGCCCAAGTCTCACCCAGCCTGGGCTGGACAAAGAGGCAGCTGTAGCAGTGGTGACAGAAGTGGAGTCTGCTGTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CAA 90 bp | TGCACAAATGCGTGCTTCTTTAGGTGGCACAGCTGTAGGAATGCCTaGCCACACTCTCCACACCGGTACCGTCGCCCCTGCTTTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CTNACFFRWHSCRNA*PHSPHRYRRPCFGE Trigger: CTCCCCAAAGCAGGGGCGACGGTACCGGTGTGGAGAGTGTGGCAAGGCATTCCTACAGCTGTGCCACCTAAAGAAGCACGCATTTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | GCACCAGCTGGTACACTTGCAGATGAAGCCTCTCGCTaGTCCGCACTGGGGCCACATTTCCCTCACTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: APAGTLADEASR*SALGPHFPHSP Trigger: TGGAGAGTGAGGGAAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS TCA 72 bp | TCAGAGCCTGGCAGCACCAGCTGGTACACTTGCAGATaGAGCCTCTCGCTGATCCGCACTGGGGCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: SEPGSTSWYTCR*SLSLIRTGATF Trigger: AAATGTGGCCCCAGTGCGGATCAGCGAGAGGCTTCATCTGCAAGTGTACCAGCTGGTGCTGCCAGGCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS GCA 72 bp | CTGCCCCGTTGTACCAAGCTAGTCCAGCCAGAACTCTaGTCACAGGCACACACGTCTCCCCATGGGCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: LPRCTKLVQPEL*SQAHTSPHGPN Trigger: ATTAGGCCCATGGGGAGACGTGTGTGCCTGTGAGCAGAGTTCTGGCTGGACTAGCTTGGTACAACGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | TGTGTAACTTCTTGGCCAGGTAGCCATGCGGCTGGGTaGCCCTGGCAGAAGATGAGAAACTGGCTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: CVTSWPGSHAAG*PWQKMRNWLHC Trigger: GCAGTGGAGCCAGTTTCTCATCTTCTGCCAGGGGCACCCAGCCGCATGGCTACCTGGCCAAGAAGTTACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | CGGAGGGAAGTCGCTCTATCCTTCAATACCTCCTCCTaGCGTGGCTTTACTCCCTCGCCCTTCTCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RREVALSFNTSS*RGFTPSPFSLE Trigger: CTCCAAGGAGAAGGGCGAGGGAGTAAAGCCACGGCAGGAGGAGGTATTGAAGGATAGAGCGACTTCCCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531866.1 |
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| CDS CCA 72 bp | CCACAGTGCGGGCACAGGAAAGGCTTTTCTCCTGTATaGAGCCTCATATGGTTCCGCAGGGAGCCCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PQCGHRKGFSPV*SLIWFRREPWL Trigger: CAACCAGGGCTCCCTGCGGAACCATATGAGGCTCCATACAGGAGAAAAGCCTTTCCTGTGCCCGCACTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | CTCCTCTGGCACCACAAAGCACTTCTCCTGGCTTTCTaGAATGGTGACCTCAACAACATCCCTGGCGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLWHHKALLLAF*NGDLNNIPGGG Trigger: TCCCCCGCCAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTTTGTGGTGCCAGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS GCA 72 bp | CACTCTCCTCTGACTTACCTAGTCCAGCCAGAACTCTaGTCACAGGCACACACGTCTCCCCATGGGCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: HSPLTYLVQPEL*SQAHTSPHGPN Trigger: ATTAGGCCCATGGGGAGACGTGTGTGCCTGTGAGCAGAGTTCTGGCTGGACTAGGTAAGTCAGAGGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526410.1 |
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| CDS TCA 72 bp | GCACCACAAAGCACTTCTCCTGGCTTTCTGAAATGGTaGCCTCAACAACATCCCTGGCGGGGGAGACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: APQSTSPGFLKW*PQQHPWRGRLP Trigger: AGGAAGTCTCCCCCGCCAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTTTGTGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | CTCACCATATTCTCTGCCTGGATGCCAGAGGGTGACTaGGAACCAGGATCTATGCAAGGTTCTGCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LTIFSAWMPEGD*EPGSMQGSAAS Trigger: GGATGCAGCAGAACCTTGCATAGATCCTGGTTCCCAGTCACCCTCTGGCATCCAGGCAGAGAATATGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CCA 72 bp | GGGAACTTAAGTCCAGGGCTCACCATATTCTCTGCCTaGATGCCAGAGGGTGACTGGGAACCAGGATCTATG | + |
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Preference number: 6 (lower is better) Translates to: GNLSPGLTIFSA*MPEGDWEPGSM Trigger: CATAGATCCTGGTTCCCAGTCACCCTCTGGCATCCAGGCAGAGAATATGGTGAGCCCTGGACTTAAGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS CCA 72 bp | GGGCCAAGTGGCTGGCTATCCTTGGAAATTCGGTCCTaGGTTGGGAACTTAAGTCCAGGGCTCACCATATTC | + |
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Preference number: 6 (lower is better) Translates to: GPSGWLSLEIRS*VGNLSPGLTIF Trigger: GAATATGGTGAGCCCTGGACTTAAGTTCCCAACCCAGGACCGAATTTCCAAGGATAGCCAGCCACTTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311764.3 ENST00000527008.1 |
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| CDS GCA 72 bp | CAAAGAAAGGGCTTGTGGCCCGTGTGCACAAATGCGTaGTTCTTTAGGTGGCACAGCTGTAGGAATGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QRKGLWPVCTNA*FFRWHSCRNAL Trigger: CAAGGCATTCCTACAGCTGTGCCACCTAAAGAAGCACGCATTTGTGCACACGGGCCACAAGCCCTTTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS CCA 72 bp | GCATCTGGCTCCTCTGGCACCACAAAGCACTTCTCCTaGCTTTCTGAAATGGTGACCTCAACAACATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASGSSGTTKHFS*LSEMVTSTTSL Trigger: CAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTTTGTGGTGCCAGAGGAGCCAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311764.3 |
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| CDS TCA 72 bp | CAACTTTTCAAACCTCGATTCTTTAACTACTGCTGCTaGGAGGAGACAGTCCTGAAGAGAAGGGACAAGACT | + |
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Preference number: 6 (lower is better) Translates to: QLFKPRFFNYCC*EETVLKRRDKT Trigger: AGTCTTGTCCCTTCTCTTCAGGACTGTCTCCTCTCAGCAGCAGTAGTTAAAGAATCGAGGTTTGAAAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531866.1 |
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