RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF398 (Homo sapiens)

Ensembl gene IDs: ENSG00000197024

Ensembl transcript IDs: ENST00000426851.6, ENST00000475153.6, ENST00000483892.5, ENST00000485111.5, ENST00000491174.1

Found 652 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGAGGCTTAGTATCGCACCTGCTTCCGTCTCTCTGGGATGGCCTTaGACATCGCCTTTCGTTCCATCTGAGGGCTCTTCCTTCATTCGT +
Preference number: 1 (lower is better)
Translates to: LRLSIAPASVSLGWP*TSPFVPSEGSSFIR
Trigger: ACGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAGCAGGTGCGATACTAAGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 90 bp ACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTGG +
Preference number: 1 (lower is better)
Translates to: TVGVGWGSQTFSWIL*PAVSIYKHEATEIW
Trigger: CCAAATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
3UTR CCA 90 bp GTCCCACATCTCACCTACTTTAGGAGTCCCTCCTCCAGCATACCCTaGCAAATGCTTGAAATCCACTCAGAAAAGGGAACTCAGCACCTA +
Preference number: 1 (lower is better)
Translates to: VPHLTYFRSPSSSIP*QMLEIHSEKGTQHL
Trigger: TAGGTGCTGAGTTCCCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGTATGCTGGAGGAGGGACTCCTAAAGTAGGTGAGATGTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp GCCCAGTTGCAAAGCCACTTAGGAGCAGACTCAGATGCTCCCAGGTaGTTAAATCACCCCAAGAAAAGAACATGTGGTAGTCAAAGTCCC +
Preference number: 1 (lower is better)
Translates to: AQLQSHLGADSDAPR*LNHPKKRTCGSQSP
Trigger: GGGACTTTGACTACCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCTCCTAAGTGGCTTTGCAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 90 bp TCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTaGTCCAAAAGGCTGACAGATGAAGAGCACGTTTCTGGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: STLREWCLCVIVTAS*SKRLTDEEHVSGVS
Trigger: GGAAACCCCAGAAACGTGCTCTTCATCTGTCAGCCTTTTGGACCAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp ATTTCCTCAATCTGTCCACTGCCAATGGGATACAGCCAGATAGGGTaGACATACACTCTCTCTGATGGCTCAAGGAAGCTGCATTATAAC +
Preference number: 1 (lower is better)
Translates to: ISSICPLPMGYSQIG*TYTLSDGSRKLHYN
Trigger: GTTATAATGCAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTTCACCCTATCTGGCTGTATCCCATTGGCAGTGGACAGATTGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp CAGGCAAGAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTaGTCTAGGAATTTCCTCAATCTGTCCACTGCCAATGGGATACAG +
Preference number: 1 (lower is better)
Translates to: QARTNCCLCMVLSSQ*SRNFLNLSTANGIQ
Trigger: CTGTATCCCATTGGCAGTGGACAGATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTCTTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp AAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATaGAGCCAGAACCTTGGCTTTGGGATTCCCAGCACCCCTAAATTT +
Preference number: 1 (lower is better)
Translates to: KLELNLTFKFLVGCQ*SQNLGFGIPSTPKF
Trigger: AAATTTAGGGGTGCTGGGAATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp TGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTaGAGCTCCATGCTTCTGGAAAGTGCTGTGATCTTTGTTGCTGAT +
Preference number: 1 (lower is better)
Translates to: CYHLTTEDQEFTGTF*SSMLLESAVIFVAD
Trigger: ATCAGCAACAAAGATCACAGCACTTTCCAGAAGCATGGAGCTTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp ATGGCTCAAGGAAGCTGCATTATAACACTGTTATCATCTCACTACTaGGGACCAAGAGTTCACTGGCACTTTCTGAAGCTCCATGCTTCT +
Preference number: 1 (lower is better)
Translates to: MAQGSCIITLLSSHY*GPRVHWHFLKLHAS
Trigger: AGAAGCATGGAGCTTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTTATAATGCAGCTTCCTTGAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp ACATCGCCTTTCGTTCCATCTGAGGGCTCTTCCTTCATTCGTATTTaGATTGTGTTCACTTTTTGCCAAAGTTTAGGTCCCTGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: TSPFVPSEGSSFIRI*IVFTFCQSLGPCWL
Trigger: TAGCCAGCAGGGACCTAAACTTTGGCAAAAAGTGAACACAATTCAAATACGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGCGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 90 bp AGACAATACTTTGGCTCTTCTCCCTTTTCACTGGGGAAATCAAGGTaGAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGC +
Preference number: 1 (lower is better)
Translates to: RQYFGSSPFSLGKSR*KLELNLTFKFLVGC
Trigger: GCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGATTTCCCCAGTGAAAAGGGAGAAGAGCCAAAGTATTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp AGTTCACTGGCACTTTCTGAAGCTCCATGCTTCTGGAAAGTGCTGTaGTCTTTGTTGCTGATGATTGTCAAGAATATCAGACACCAGGAA +
Preference number: 1 (lower is better)
Translates to: SSLALSEAPCFWKVL*SLLLMIVKNIRHQE
Trigger: TTCCTGGTGTCTGATATTCTTGACAATCATCAGCAACAAAGATCACAGCACTTTCCAGAAGCATGGAGCTTCAGAAAGTGCCAGTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp ACAGCAGACACACATTTCTTGTGTCTCCCATGGTCCCTGGTATTGTaGATGTCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAG +
Preference number: 1 (lower is better)
Translates to: TADTHFLCLPWSLVL*MSWSRCFLSVIILQ
Trigger: CTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGACATTCACAATACCAGGGACCATGGGAGACACAAGAAATGTGTGTCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 90 bp TGGACATGCTGGGCTCCTTTCCAGGTCTTTCTGGGTTTCAAAATGTaGTATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCT +
Preference number: 1 (lower is better)
Translates to: WTCWAPFQVFLGFKM*YSCKGVKFQNTSMS
Trigger: AGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATACCACATTTTGAAACCCAGAAAGACCTGGAAAGGAGCCCAGCATGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 90 bp GGAAAACCTAGTAAGCAAAGAGTAAATCTGGTTATAGTCAACACCTaGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGC +
Preference number: 1 (lower is better)
Translates to: GKPSKQRVNLVIVNT*IHSKGMVLMCDSDS
Trigger: GCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGTGTTGACTATAACCAGATTTACTCTTTGCTTACTAGGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp CATCATGTCTTGTTCTGTATTATTGGGCTTTTTCACTGTAAGTTATaGCAGCAGACACACATTTCTTGTGTCTCCCATGGTCCCTGGTAT +
Preference number: 1 (lower is better)
Translates to: HHVLFCIIGLFHCKL*QQTHISCVSHGPWY
Trigger: ATACCAGGGACCATGGGAGACACAAGAAATGTGTGTCTGCTGTCATAACTTACAGTGAAAAAGCCCAATAATACAGAACAAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 90 bp TCAACCTGCTGTTCTCTGAGAACAAGAGAACTAGAGGTTAAATCCTaGTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGT +
Preference number: 1 (lower is better)
Translates to: STCCSLRTRELEVKS*FPTSPQYSCNFCFC
Trigger: ACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGGATTTAACCTCTAGTTCTCTTGTTCTCAGAGAACAGCAGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 90 bp CAAGAATTTATCTGCTTTGACTTTGCTGTCTTATTTAGCTTTGCCTaGACAGAAGCCAAAGACAGAGACAGAACTTTGGCAGGAAAAGGA +
Preference number: 1 (lower is better)
Translates to: QEFICFDFAVLFSFA*TEAKDRDRTLAGKG
Trigger: TCCTTTTCCTGCCAAAGTTCTGTCTCTGTCTTTGGCTTCTGTCCAGGCAAAGCTAAATAAGACAGCAAAGTCAAAGCAGATAAATTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 90 bp CAGGAATGGAGAAGCCAACTTACTGGCTTGGAAAAGATAAGAATTTaGTGTGAACGACTCTCAGAACATGGTGTAGGCACAAATTTTAAG +
Preference number: 1 (lower is better)
Translates to: QEWRSQLTGLEKIRI*CERLSEHGVGTNFK
Trigger: CTTAAAATTTGTGCCTACACCATGTTCTGAGAGTCGTTCACATCAAATTCTTATCTTTTCCAAGCCAGTAAGTTGGCTTCTCCATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTACTGTGGGTGTTGGATaGGGCTCACAGACCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSTVGVG*GSQTFS
Trigger: AGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTAACATACACTCTCTCTaGTGGCTCAAGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSNIHSL*WLKEAA
Trigger: TGCAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTT...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTAAAAGATGGACATGCTaGGCTCCTTTCCAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSKRWTC*APFQVF
Trigger: AAAGACCTGGAAAGGAGCCCAGCATGTCCATCTTTT...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTACAAACTGTTGTCTATaGATGGTGCTTAGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRATNCCL*MVLSSQ
Trigger: CTGAGAGCTAAGCACCATGCATAGACAACAGTTTGT...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 90 bp AAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTaGCCAATGAAGCCAGAACCTTGGCTTTGGGATTCCCAGCACCCC +
Preference number: 2 (lower is better)
Translates to: KVQTRAESHIQVPSG*PMKPEPWLWDSQHP
Trigger: GGGGTGCTGGGAATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATACTGTGGGTGTTGGATaGGGCTCACAGACCTTCTCT +
Preference number: 2 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHTVGVG*GSQTFS
Trigger: AGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 90 bp ATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATT +
Preference number: 2 (lower is better)
Translates to: ITVGVGWGSQTFSWI*CPAVSIYKHEATEI
Trigger: AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
3UTR-3UTR TCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTAGCCACAGAGGTGTGTaGACAGATCTTGGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLSHRGV*TDLGWF
Trigger: AAACCAGCCAAGATCTGTTCACACACCTCTGTGGCT...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCCTCAATCTGTCCACTaGCAATGGGATACAGCCAGA +
Preference number: 2 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLPQSVH*QWDTAR
Trigger: TCTGGCTGTATCCCATTGGCAGTGGACAGATTGAGG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTGCCTTTCGTTCCATCTaGGGGCTCTTCCTTCATTCG +
Preference number: 2 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLAFRSI*GLFLHS
Trigger: CGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGC...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTATCAGACACCAGGAATaGAGAAGCCAACTTACTGGC +
Preference number: 2 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLIRHQE*RSQLTG
Trigger: GCCAGTAAGTTGGCTTCTCCATTCCTGGTGTCTGAT...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTGTCTCCCATGGTCCCTaGTATTGTGAATGTCATGGA +
Preference number: 2 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLVSHGP*YCECHG
Trigger: TCCATGACATTCACAATACCAGGGACCATGGGAGAC...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTTTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 2 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCTAGAGGTTAAATCCTaGTTTCCAACCTCTCCGCAA +
Preference number: 2 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLLEVKS*FPTSPQ
Trigger: TTGCGGAGAGGTTGGAAAGCAGGATTTAACCTCTAG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTATGGGCTTCCAGTTTTaGAGGCTCTTCTCATGTATC +
Preference number: 2 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPMGFQF*RLFSCI
Trigger: GATACATGAGAAGAGCCTCCAAAACTGGAAGCCCAT...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTAATTACTGTGGGTGTTaGATGGGGCTCACAGACCTT +
Preference number: 2 (lower is better)
Translates to: GFPFPILSGHDKQFSCISNYCGC*MGLTDL
Trigger: AAGGTCTGTGAGCCCCATCCAACACCCACAGTAATT...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCCATTCTCATGCCTTATaGTGGGCTTCCAGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: EQTVVYAWCLALSDLGISHSHAL*WASSFG
Trigger: TCCAAAACTGGAAGCCCATCATAAGGCATGAGAATG...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCTTGGATTTTGTGCCCTaGTGTGAGCATATACAAGCA +
Preference number: 2 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSLDFVP*CEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAA...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATATGGCTCAAGGAAGCTaGATTATAACACTGTTATCA +
Preference number: 2 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDMAQGS*IITLLS
Trigger: TGATAACAGTGTTATAATGCAGCTTCCTTGAGCCAT...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCAACACTCTTTGGAACTaGCCTGCAGTTCTAACTGAT +
Preference number: 2 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSNTLWN*PAVLTD
Trigger: ATCAGTTAGAACTGCAGGCCAGTTCCAAAGAGTGTT...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGATAAGAATTTGATGTaGACGACTCTCAGAACATGG +
Preference number: 2 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSDKNLM*TTLRTW
Trigger: CCATGTTCTGAGAGTCGTTCACATCAAATTCTTATC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGATGGCTCAAGGAAGCTaGATTATAACACTGTTATCA +
Preference number: 2 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWMAQGS*IITLLS
Trigger: TGATAACAGTGTTATAATGCAGCTTCCTTGAGCCAT...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATCTTCTAGTGTTGTTATaGATAACTAGAGAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDLLVLL*ITRESE
Trigger: TTCACTCTCTCTAGTTATGCATAACAACACTAGAAG...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGAATATGCTAGGGTATTaGCCATCATGTCTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKNMLGY*PSCLVL
Trigger: CAGAACAAGACATGATGGGCAATACCCTAGCATATT...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTGCATACCCTGGCAAATaGTTGAAATCCACTCAGAAA +
Preference number: 2 (lower is better)
Translates to: GFPFPILSGHDKQFSCISAYPGK*LKSTQK
Trigger: TTTCTGAGTGGATTTCAAGCATTTGCCAGGGTATGC...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGGAGAAGCCAACTTACTaGCTTGGAAAAGATAAGAAT +
Preference number: 2 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWEKPTY*LGKDKN
Trigger: ATTCTTATCTTTTCCAAGCCAGTAAGTTGGCTTCTC...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGACATTCTCATGCCTTATaGTGGGCTTCCAGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRHSHAL*WASSFG
Trigger: TCCAAAACTGGAAGCCCATCATAAGGCATGAGAATG...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTGATAAGAATTTGATGTaGACGACTCTCAGAACATGG +
Preference number: 2 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLDKNLM*TTLRTW
Trigger: CCATGTTCTGAGAGTCGTTCACATCAAATTCTTATC...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGAGAAGCCAACTTACTaGCTTGGAAAAGATAAGAAT +
Preference number: 2 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSEKPTY*LGKDKN
Trigger: ATTCTTATCTTTTCCAAGCCAGTAAGTTGGCTTCTC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 90 bp TTCAACAAGAATTTATCTGCTTTGACTTTGCTGTCTTATTTAGCTTaGCCTGGACAGAAGCCAAAGACAGAGACAGAACTTTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: FNKNLSALTLLSYLA*PGQKPKTETELWQE
Trigger: TTCCTGCCAAAGTTCTGTCTCTGTCTTTGGCTTCTGTCCAGGCAAAGCTAAATAAGACAGCAAAGTCAAAGCAGATAAATTCTTGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTAACATACACTCTCTCTaGTGGCTCAAGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSNIHSL*WLKEAA
Trigger: TGCAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTT...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAGTGCTTAGCTCTCAGTaGTCTAGGAATTTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRVLSSQ*SRNFLN
Trigger: ATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCAC...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTCTTTCCAGGTCTTTCTaGGTTTCAAAATGTGGTATT +
Preference number: 2 (lower is better)
Translates to: GFPFPILSGHDKQFSCISLSRSF*VSKCGI
Trigger: AATACCACATTTTGAAACCCAGAAAGACCTGGAAAG...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTGGACCAAGAGTTCACTaGCACTTTCTGAAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSGPRVH*HFLKLH
Trigger: ATGGAGCTTCAGAAAGTGCCAGTGAACTCTTGGTCC...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 90 bp TCCCAATATGCTAGGGTATTGCCCATCATGTCTTGTTCTGTATTATaGGGCTTTTTCACTGTAAGTTATGACAGCAGACACACATTTCTT +
Preference number: 2 (lower is better)
Translates to: SQYARVLPIMSCSVL*GFFTVSYDSRHTFL
Trigger: AAGAAATGTGTGTCTGCTGTCATAACTTACAGTGAAAAAGCCCAATAATACAGAACAAGACATGATGGGCAATACCCTAGCATATTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTTTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR TCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTTTATCATCTCACTACTaGGGACCAAGAGTTCACTGG +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSLSSHY*GPRVHW
Trigger: CCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAA...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGACAGCAACATAAACAGTaGCTTAAGCACTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRQQHKQ*LKHFLQ
Trigger: TTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTG...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGATTATTTAGCTTTGCCTaGACAGAAGCCAAAGACAGA +
Preference number: 2 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRLFSFA*TEAKDR
Trigger: TCTGTCTTTGGCTTCTGTCCAGGCAAAGCTAAATAA...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 90 bp TTTCCAATACTAAATGTTCAGCAGAAAAGGAGCAGGGCCATCTTCTaGCACTTTCTAGACAATCAACCAACTTCCATTTATTTTCACAAC +
Preference number: 2 (lower is better)
Translates to: FPILNVQQKRSRAIF*HFLDNQPTSIYFHN
Trigger: GTTGTGAAAATAAATGGAAGTTGGTTGATTGTCTAGAAAGTGCAAGAAGATGGCCCTGCTCCTTTTCTGCTGAACATTTAGTATTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475153.6
3UTR-3UTR GCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTTTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATAC +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSFSWIL*PAVSIY
Trigger: GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR GCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTACAAACTGTTGTCTATaGATGGTGCTTAGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: PYHFIKKISCLNISRPCSTNCCL*MVLSSQ
Trigger: CTGAGAGCTAAGCACCATGCATAGACAACAGTTTGT...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 72 bp AGTATCGCACCTGCTTCCGTCTCTCTGGGATGGCCTTaGACATCGCCTTTCGTTCCATCTGAGGGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SIAPASVSLGWP*TSPFVPSEGSS
Trigger: GGAAGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAGCAGGTGCGATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp ATCTGTCCACTGCCAATGGGATACAGCCAGATAGGGTaGACATACACTCTCTCTGATGGCTCAAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: ICPLPMGYSQIG*TYTLSDGSRKL
Trigger: CAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTTCACCCTATCTGGCTGTATCCCATTGGCAGTGGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp CTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATaGAGCCAGAACCTTGGCTTTGGGATTCCCAGCACC +
Preference number: 3 (lower is better)
Translates to: LNLTFKFLVGCQ*SQNLGFGIPST
Trigger: GGTGCTGGGAATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 72 bp GTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATACAAGCATGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: VGWGSQTFSWIL*PAVSIYKHEAT
Trigger: TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
3UTR GCA 72 bp ACTTTAGGAGTCCCTCCTCCAGCATACCCTGGCAAATaGTTGAAATCCACTCAGAAAAGGGAACTCAGCACC +
Preference number: 3 (lower is better)
Translates to: TLGVPPPAYPGK*LKSTQKRELST
Trigger: GGTGCTGAGTTCCCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGTATGCTGGAGGAGGGACTCCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp TGTGGACTGTTATTACCGAGTAAGTCACAGGGTCTGGTCCTGGTTGAGATAGACCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: CGLLLPSKSQGLVLVEIDLTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...GTCTATCTCAACCAGGACCAGACCCTGTGACTTACTCGGTAATAACAGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
3UTR-3UTR CAA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGCCTAGGCAGGCAGTCTaGAGTTACCATGTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWPRQAV*SYHVSG
Trigger: CCCTGAAACATGGTAACTCAAGACTGCCTGCCTAGG...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 3 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWTFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTGATGGGCTTCCAGTTTaGGAGGCTCTTCTCATGTAT +
Preference number: 3 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPDGLPV*EALLMY
Trigger: ATACATGAGAAGAGCCTCCAAAACTGGAAGCCCATC...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp TCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTaGGGGCTCTTCCTTCATTCGTATTTGAATTGTGTT +
Preference number: 3 (lower is better)
Translates to: SGMALHIAFRSI*GLFLHSYLNCV
Trigger: AACACAATTCAAATACGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
3UTR TCA 72 bp CAAAGCCACTTAGGAGCAGACTCAGATGCTCCCAGGTaGTTAAATCACCCCAAGAAAAGAACATGTGGTAGT +
Preference number: 3 (lower is better)
Translates to: QSHLGADSDAPR*LNHPKKRTCGS
Trigger: ACTACCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCTCCTAAGTGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 72 bp ACACAGTTCCTTTCAGAAGGGACTGCGGGATCTATCTaGAGCCATTTCAATCCACAGGTCTCTTTCACTAAT +
Preference number: 3 (lower is better)
Translates to: TQFLSEGTAGSI*SHFNPQVSFTN
Trigger: ATTAGTGAAAGAGACCTGTGGATTGAAATGGCTGCAGATAGATCCCGCAGTCCCTTCTGAAAGGAACTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 3 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWTFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
3UTR-3UTR CAA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCTTAAGCAAACACTCTTaGGAACTGGCCTGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSLSKHS*ELACSS
Trigger: AGAACTGCAGGCCAGTTCCAAAGAGTGTTTGCTTAA...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTGCTTTTGTTGTATCTTaGAAAAGATGGACATGCTGG +
Preference number: 3 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPAFVVS*KRWTCW
Trigger: CCAGCATGTCCATCTTTTCAAAGATACAACAAAAGC...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTTACCCTGGCAAATGCTaGAAATCCACTCAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLYPGKC*KSTQKR
Trigger: CCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGTA...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp ACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTaGTCTAGGAATTTCCTCAATCTGTCCACTGCCAAT +
Preference number: 3 (lower is better)
Translates to: TNCCLCMVLSSQ*SRNFLNLSTAN
Trigger: ATTGGCAGTGGACAGATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 72 bp CAACACAGGCAAGAACAAACTGTTGTCTATGCATGGTaGTTAGCTCTCAGTGATCTAGGAATTTCCTCAATC +
Preference number: 3 (lower is better)
Translates to: QHRQEQTVVYAW*LALSDLGISSI
Trigger: GATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTCTTGCCTGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 72 bp AAGCAACACAGGCAAGAACAAACTGTTGTCTATGCATaGTGCTTAGCTCTCAGTGATCTAGGAATTTCCTCA +
Preference number: 3 (lower is better)
Translates to: KQHRQEQTVVYA*CLALSDLGISS
Trigger: TGAGGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTCTTGCCTGTGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp AGAAGCCAACTTACTGGCTTGGAAAAGATAAGAATTTaGTGTGAACGACTCTCAGAACATGGTGTAGGCACA +
Preference number: 3 (lower is better)
Translates to: RSQLTGLEKIRI*CERLSEHGVGT
Trigger: TGTGCCTACACCATGTTCTGAGAGTCGTTCACATCAAATTCTTATCTTTTCCAAGCCAGTAAGTTGGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp ACACATTTCTTGTGTCTCCCATGGTCCCTGGTATTGTaGATGTCATGGAGCAGATGTTTTCTAAGTGTGATT +
Preference number: 3 (lower is better)
Translates to: THFLCLPWSLVL*MSWSRCFLSVI
Trigger: AATCACACTTAGAAAACATCTGCTCCATGACATTCACAATACCAGGGACCATGGGAGACACAAGAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp TTCGTTCCATCTGAGGGCTCTTCCTTCATTCGTATTTaGATTGTGTTCACTTTTTGCCAAAGTTTAGGTCCC +
Preference number: 3 (lower is better)
Translates to: FVPSEGSSFIRI*IVFTFCQSLGP
Trigger: GGGACCTAAACTTTGGCAAAAAGTGAACACAATTCAAATACGAATGAAGGAAGAGCCCTCAGATGGAACGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR-3UTR CAA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAGACAGAGACAGAACTTaGGCAGGAAAAGGAATGTAT +
Preference number: 3 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRDRDRT*AGKGMY
Trigger: ATACATTCCTTTTCCTGCCAAAGTTCTGTCTCTGTC...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR GCA 72 bp TGTTCTCTGAGAACAAGAGAACTAGAGGTTAAATCCTaGTTTCCAACCTCTCCGCAATATTCTTGTAACTTC +
Preference number: 3 (lower is better)
Translates to: CSLRTRELEVKS*FPTSPQYSCNF
Trigger: GAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGGATTTAACCTCTAGTTCTCTTGTTCTCAGAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CCA 72 bp AGTAAGCAAAGAGTAAATCTGGTTATAGTCAACACCTaGATCCACTCTAAGGGAATGGTGCTTATGTGTGAT +
Preference number: 3 (lower is better)
Translates to: SKQRVNLVIVNT*IHSKGMVLMCD
Trigger: ATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGTGTTGACTATAACCAGATTTACTCTTTGCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR TCA 72 bp CCAACTTACTGGCTTGGAAAAGATAAGAATTTGATGTaGACGACTCTCAGAACATGGTGTAGGCACAAATTT +
Preference number: 3 (lower is better)
Translates to: PTYWLGKDKNLM*TTLRTWCRHKF
Trigger: AAATTTGTGCCTACACCATGTTCTGAGAGTCGTTCACATCAAATTCTTATCTTTTCCAAGCCAGTAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCAGTCCGGGTTTCTGTaGAGCGCGTCTCCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRAQSGFL*SASPSR
Trigger: GCGACTGGGAGACGCGCTCCACAGAAACCCGGACTG...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426851.6
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGGCCTTTCGCTTGCATaGGCTCTCCGGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLGLSLA*ALRWLV
Trigger: CACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGGGCGCTCTTGTGCATaGCCCCGCTGGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALGRSCA*PRWWSR
Trigger: CCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCGGCGGAGGCGCGGTaGAGCAGGCGGCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHAAEAR*SRRRIK
Trigger: CTTGATCCGCCGCCTGCTGCACCGCGCCTCCGCCGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTGGACGCTCGCCTGTGTaGATCATCTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSGRSPV*IIWWRI
Trigger: GATCCGCCACCAGATGATCCACACAGGCGAGCGTCC...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGGGCGCTCTTGTGCATaGCCCCGCTGGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAGRSCA*PRWWSR
Trigger: CCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGGGCCGAGTGGCCGTTaGAGTCAATGCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLGPSGR*SQCHTE
Trigger: CTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCGCCTCCATTGTGGCCTaGACGGAGGTGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSASIVA*TEVVLE
Trigger: CTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGC...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTCACAGTGTGGGCAGGTaGGGGGTGTCTCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCHSVGR*GVSRWH
Trigger: ATGCCAGCGAGACACCCCCCACCTGCCCACACTGTG...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGTGTGGATCATCTGGTaGCGGATCAGGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLVWIIW*RIRAEW
Trigger: CCACTCGGCCCTGATCCGCCACCAGATGATCCACAC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGCCACAGTGGTGGCATaGGAACACCTGCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCATVVA*EHLLAN
Trigger: GTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGC...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTGGTGCTCCTTGCGCATaGAGCTCTTACTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRAGAPCA*SSYCSQ
Trigger: CTGACTGCAGTAAGAGCTTCATGCGCAAGGAGCACC...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGTTGGGTGGCTGACCTaGTGGGTCACTATCACCCCC +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCVGWLT*WVTITP
Trigger: GGGGGTGATAGTGACCCATCAGGTCAGCCACCCAAC...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTTTTCAAGCCCAGTTATaGGGGGACCTGGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSFQAQL*GDLVGW
Trigger: CCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAA...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGAAGGGCCTTTCGCTTaGATGAGCTCTCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLEGPFA*MSSPVA
Trigger: AGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGTGTCCCGAGTCCGGTaGCGGGAGCCCAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATVSRVR*REPRRH
Trigger: GTGACGCCTGGGCTCCCGGCACCGGACTCGGGACAC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS-3UTR CCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCAGGAGTCGCCGGCTGTaGATCTCCACCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSRSRRL*ISTFLS
Trigger: AGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCT...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCTCGCCAACTGGAGGTaGGAGGGGATAGCTACCCAA +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSLANWR*EGIATQ
Trigger: TTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCGGATCAGGGCCGAGTaGCCGTTGAAGTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSRIRAE*PLKSMP
Trigger: TGGCATTGACTTCAACGGCCACTCGGCCCTGATCCG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGTGTGGATCATCTGGTaGCGGATCAGGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCVWIIW*RIRAEW
Trigger: CCACTCGGCCCTGATCCGCCACCAGATGATCCACAC...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGGTGGGGCCCCAACCTaGGGCTCTTCTTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLGGAPT*GSSSCL
Trigger: TAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGGGCGCTCTTGTGCATaGCCCCGCTGGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEGRSCA*PRWWSR
Trigger: CCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTGCCTTTCGTTCCATCTaGGGGCTCTTCCTTCATTCG +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRAAFRSI*GLFLHS
Trigger: CGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGC...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACACCGCATCCCTCGCATaGAGATCCGGGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYTASLA*RSGSPR
Trigger: CCTTGGACTCCCGGATCTGCATGCGAGGGATGCGGT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426851.6
CDS-3UTR GCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCCTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCLGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGCCTCCCAG...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426851.6
CDS-3UTR GCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGTGTGCCTCATTTGCTaGTGGGGGTGTAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLVCLIC*WGCRKR
Trigger: CCTCTTCCTACACCCCCAGCAGCAAATGAGGCACAC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGAAGGGCCTTTCGCTTaGATGAGCTCTCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCEGPFA*MSSPVA
Trigger: AGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTC...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGGCAAATGCGATCAGTaGTTTCCCCGCGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALGKCDQ*FPRGLT
Trigger: GGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS-3UTR CCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTAGGAGTCGCCGGCTGTaGATCTCCACCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCRSRRL*ISTFLS
Trigger: AGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCT...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCTCCTTGGACTCCGGTaGGGCCCCAACCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHLLGLR*GPNLRL
Trigger: GAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACACACGTCACTCTCCTTaGACTCCGGTGGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYTRHSP*TPVGPQ
Trigger: TTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCTGGTGAGTCGAGCCTaGTCAGCAAAGCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYLVSRA*SAKRLG
Trigger: CCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTCGGATCAGGGCCGAGTaGCCGTTGAAGTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCRIRAE*PLKSMP
Trigger: TGGCATTGACTTCAACGGCCACTCGGCCCTGATCCG...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGTGTGGATCATCTGGTaGCGGATCAGGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALVWIIW*RIRAEW
Trigger: CCACTCGGCCCTGATCCGCCACCAGATGATCCACAC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTTGGCCTGAACGGAGGTaGTCCTTGAGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSWPERR*SLSVCL
Trigger: CAAACAGACACTCAAGGACCACCTCCGTTCAGGCCA...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCAGCGGCCCCTCAGCTaGCGCTTTGTGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCQRPLS*RFVGSE
Trigger: CTCGCTGCCCACAAAGCGCCAGCTGAGGGGCCGCTG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR TCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGGTGCTCCTTGCGCATaGAGCTCTTACTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCGAPCA*SSYCSQ
Trigger: CTGACTGCAGTAAGAGCTTCATGCGCAAGGAGCACC...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGTTGGGTGGCTGACCTaGTGGGTCACTATCACCCCC +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKVGWLT*WVTITP
Trigger: GGGGGTGATAGTGACCCATCAGGTCAGCCACCCAAC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTGATCTTGGCTGGTTTTaGGAGAGGAGGCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRADLGWF*ERRQQH
Trigger: ATGTTGCTGCCTCCTCTCTCAAAACCAGCCAAGATC...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTAGGCAGGCAGTCTTaGGTTACCATGTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRALGRQS*VTMFQG
Trigger: TCCCTGAAACATGGTAACTCAAGACTGCCTGCCTAG...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCTTTCCCCGCGGCCTaGCCGTCCCCTTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHAFPAA*PSPSHS
Trigger: AGAATGAGAAGGGGACGGTCAGGCCGCGGGGAAAGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS-3UTR GCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCGCACAGGGTAAGGGGTaGTCAGTAGCATGGCTACAT +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSAQGKG*SVAWLH
Trigger: ATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGC...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGGTGGTTCAGCAGGTaGTCCTTGCGCATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALRWFSR*SLRMKL
Trigger: GAGCTTCATGCGCAAGGAGCACCTGCTGAACCACCG...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTCCTTGGACTCCGGTaGGGCCCCAACCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELLGLR*GPNLRL
Trigger: GAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAACACGTCACTCTCCTTaGACTCCGGTGGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQATRHSP*TPVGPQ
Trigger: TTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCGGTGTCTCGCTGGCATaGTCCTGGGAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAGVSLA*SWEVLL
Trigger: CAGCAGCACCTCCCAGGACCATGCCAGCGAGACACC...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATCACAGTGTGGGCAGGTaGGGGGTGTCTCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDHSVGR*GVSRWH
Trigger: ATGCCAGCGAGACACCCCCCACCTGCCCACACTGTG...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCTGTGTGGATCATCTaGTGGCGGATCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIPVWII*WRIRAE
Trigger: CTCGGCCCTGATCCGCCACCAGATGATCCACACAGG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGCTTCCGTCTCTCTaGGATGGCCTTGCACATCGC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALLLPSL*DGLAHR
Trigger: GCGATGTGCAAGGCCATCCCAGAGAGACGGAAGCAG...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTGGCGGCGGATCAAGCTaGGGTCGCGAGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISGGGSS*GREADS
Trigger: GGAGTCGGCCTCGCGACCCCAGCTTGATCCGCCGCC...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGGTGGGGCCCCAACCTaGGGCTCTTCTTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYGGAPT*GSSSCL
Trigger: TAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCCACAGTGGTGGCATaGGAACACCTGCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHATVVA*EHLLAN
Trigger: GTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGGCCTTTCGCTTGCATaGGCTCTCCGGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCGLSLA*ALRWLV
Trigger: CACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAAGTCAATGCCACACTaGGGGCAGGAGAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKKSMPH*GQEKGR
Trigger: GCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAAAGTCAATGCCACACTaGGGGCAGGAGAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAKSMPH*GQEKGR
Trigger: GCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGGTGCTCCTTGCGCATaGAGCTCTTACTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALGAPCA*SSYCSQ
Trigger: CTGACTGCAGTAAGAGCTTCATGCGCAAGGAGCACC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCACAGTGAGGACAACTaGAGGGCCGCTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHHSEDN*RAARLC
Trigger: ACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGTG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAACACAGTGAGGACAACTaGAGGGCCGCTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQHSEDN*RAARLC
Trigger: ACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGTG...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCACAGTGAGGACAACTaGAGGGCCGCTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAHSEDN*RAARLC
Trigger: ACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGTG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCAACGGAGGTGGTCCTTaGGTGTCTGTTTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCNGGGP*VSVCSG
Trigger: TCCGCTACAAACAGACACTCAAGGACCACCTCCGTT...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCCTCCATTGTGGCCTaGACGGAGGTGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQASIVA*TEVVLE
Trigger: CTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGAGCCACAGAGGTGTGTaGACAGATCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLSHRGV*TDLGWF
Trigger: AAACCAGCCAAGATCTGTTCACACACCTCTGTGGCT...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTACCCTGGCAAATGCTTaGAATCCACTCAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRATLANA*NPLRKG
Trigger: CCCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGT...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTTTTATTCTTGGGCTaGGGCTTAGTATCGCACCTG +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRALLFLG*GLVSHL
Trigger: CAGGTGCGATACTAAGCCTCAGCCCAAGAATAAAAG...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCAGGTGTGCCTCATTTaGTGCTGGGGGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYQVCLI*CWGCRK
Trigger: CTTCCTACACCCCCAGCAGCAAATGAGGCACACCTG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCCACAGAGAGATAGCTaGTGTCTGCAGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYPQRDS*CLQVCL
Trigger: GAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATATGGCATGAGAACACCTaGTCGCCAACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIWHENT*SPTGGG
Trigger: CCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCA...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGTGGCATGAGAACACCTaGTCGCCAACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKWHENT*SPTGGG
Trigger: CCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCA...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYACGVK*LGHWAQ
Trigger: CTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAAAGGGCGCTCTTGTaGATGACCCCGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQERALL*MTPLVE
Trigger: CTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTCCGCACACTTAAATaGCGCCCGCGCCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELRTLK*RPRHRS
Trigger: TGAGCGGTGGCGCGGGCGGCATTTAAGTGTGCGGAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCAGCGCGGCGGGAATaGGCCTCCGCACACTTAAAT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHAARRE*ASAHLN
Trigger: ATTTAAGTGTGCGGAGGCGCATTCCCGCCGCGCTGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAGGAGTCGCCGGCTGTaGATCTCCACCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKRSRRL*ISTFLS
Trigger: AGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGCTTCACTGGGGTCTGTaGGAATCTCACTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLLHWGL*ESHFPL
Trigger: CAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAAG...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAACTCCTTGGACTCCGGTaGGGCCCCAACCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHELLGLR*GPNLRL
Trigger: GAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAG...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAACACCTGCTCGCCAACTaGAGGTGGGAGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQHLLAN*RWEGIA
Trigger: AGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTG...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYGCSVA*LHWWVS
Trigger: GCTGACCCACCAATGTAGCCATGCTACTGAGCACCC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALGCSVA*LHWWVS
Trigger: GCTGACCCACCAATGTAGCCATGCTACTGAGCACCC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTGGTGTCTCGCTGGCATaGTCCTGGGAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLGVSLA*SWEVLL
Trigger: CAGCAGCACCTCCCAGGACCATGCCAGCGAGACACC...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCACAGTGTGGGCAGGTaGGGGGTGTCTCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEHSVGR*GVSRWH
Trigger: ATGCCAGCGAGACACCCCCCACCTGCCCACACTGTG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATAGGTCAGCAAAGCGCTTaGGGCAATCAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIGQQSA*GNQDRG
Trigger: TCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACC...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATCCTGTGTGGATCATCTaGTGGCGGATCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDPVWII*WRIRAE
Trigger: CTCGGCCCTGATCCGCCACCAGATGATCCACACAGG...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGACGCTCGCCTGTGTaGATCATCTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQGRSPV*IIWWRI
Trigger: GATCCGCCACCAGATGATCCACACAGGCGAGCGTCC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAAATGCCACAGGCACCTaGAGGGAGCCGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQNATGT*REPQDP
Trigger: TGGATCCTGCGGCTCCCTCCAGGTGCCTGTGGCATT...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS-3UTR TCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSHNPWR*ETRSCP
Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGGTGGGGCCCCAACCTaGGGCTCTTCTTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAGGAPT*GSSSCL
Trigger: TAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGCCACAGTGGTGGCATaGGAACACCTGCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCATVVA*EHLLAN
Trigger: GTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGCAACATGTCTTGGCTaGGATTCTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCATCLG*DSCHSG
Trigger: ACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGC...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGGTAAGTCTTGATGGGTaGGTAAAAGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLVSLDG*VKVLAQ
Trigger: CTGTGCCAGGACTTTTACTCACCCATCAAGACTTAC...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGGCCTTTCGCTTGCATaGGCTCTCCGGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEGLSLA*ALRWLV
Trigger: CACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCAAGTCAATGCCACACTaGGGGCAGGAGAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAKSMPH*GQEKGR
Trigger: GCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTT...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTGGGCCGAGTGGCCGTTaGAGTCAATGCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPGPSGR*SQCHTE
Trigger: CTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCC...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGGTGCTCCTTGCGCATaGAGCTCTTACTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKGAPCA*SSYCSQ
Trigger: CTGACTGCAGTAAGAGCTTCATGCGCAAGGAGCACC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATATTTCAAGCCCAGTTATaGGGGGACCTGGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIFQAQL*GDLVGW
Trigger: CCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAA...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTAGCCACAGAGGTGTGTaGACAGATCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCSHRGV*TDLGWF
Trigger: AAACCAGCCAAGATCTGTTCACACACCTCTGTGGCT...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCTTGGTCCAAAAGGCTaGCAGATGAAGAGCACGTTT +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSLGPKG*QMKSTF
Trigger: AAACGTGCTCTTCATCTGTCAGCCTTTTGGACCAAG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCCACAGAGAGATAGCTaGTGTCTGCAGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKPQRDS*CLQVCL
Trigger: GAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAATTCCTCTCTATAGCCTaGACGGCGGCCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQFLSIA*TAATTV
Trigger: GACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAA...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAATGGCATGAGAACACCTaGTCGCCAACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQWHENT*SPTGGG
Trigger: CCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCA...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGGAAAGGACGCTCAGTaGTGTTATGGACCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCGKDAQ*CYGPED
Trigger: ATCTTCGGGTCCATAACAGCACTGAGCGTCCTTTCC...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGAAAGGGCGCTCTTGTaGATGACCCCGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCERALL*MTPLVE
Trigger: CTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCGGTGGTTCAGCAGGTaGTCCTTGCGCATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHRWFSR*SLRMKL
Trigger: GAGCTTCATGCGCAAGGAGCACCTGCTGAACCACCG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCGGTGGTTCAGCAGGTaGTCCTTGCGCATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEARWFSR*SLRMKL
Trigger: GAGCTTCATGCGCAAGGAGCACCTGCTGAACCACCG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGTCCTCTGGCCCTGCCTaGTCCTCTGTATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALSSGPA*SSVLCS
Trigger: GGAACATAATACAGAGGACCAGGCAGGGCCAGAGGA...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATACACGTCACTCTCCTTaGACTCCGGTGGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHTRHSP*TPVGPQ
Trigger: TTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGT...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAGGCAGGTCAGTGGCTaGACGTCCAAAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYRQVSG*TSKRCH
Trigger: ATGACACCTTTTGGACGTCCAGCCACTGACCTGCCT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACTTCAGGCAGGTCAGTaGCTGGACGTCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHILQAGQ*LDVQKV
Trigger: CACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCACCTGCTCGCCAACTaGAGGTGGGAGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEHLLAN*RWEGIA
Trigger: AGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATAGCTGAGGTCCGCCTGTaGAGTAAAGTGCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIAEVRL*SKVLRA
Trigger: TGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGC...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGCTGAGGTCCGCCTGTaGAGTAAAGTGCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKAEVRL*SKVLRA
Trigger: TGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGGTGTCTCGCTGGCATaGTCCTGGGAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSGVSLA*SWEVLL
Trigger: CAGCAGCACCTCCCAGGACCATGCCAGCGAGACACC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCGGTCAGCAAAGCGCTTaGGGCAATCAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAGQQSA*GNQDRG
Trigger: TCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACC...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGGTCAGCAAAGCGCTTaGGGCAATCAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHGQQSA*GNQDRG
Trigger: TCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCGGATCAGGGCCGAGTaGCCGTTGAAGTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHRIRAE*PLKSMP
Trigger: TGGCATTGACTTCAACGGCCACTCGGCCCTGATCCG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGGACGCTCGCCTGTGTaGATCATCTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCGRSPV*IIWWRI
Trigger: GATCCGCCACCAGATGATCCACACAGGCGAGCGTCC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGTGGCCTGAACGGAGGTaGTCCTTGAGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALWPERR*SLSVCL
Trigger: CAAACAGACACTCAAGGACCACCTCCGTTCAGGCCA...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCCACAGCCTCCATTGTaGCCTGAACGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLPQPPL*PERRWS
Trigger: GGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACCACAGCCTCCATTGTaGCCTGAACGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATPQPPL*PERRWS
Trigger: GGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCGTCTCCCATGGTCCCTaGTATTGTGAATGTCATGGA +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSVSHGP*YCECHG
Trigger: TCCATGACATTCACAATACCAGGGACCATGGGAGAC...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAGGCGGAGGTTGCAGTaGGCCAAGATCACACCACTC +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATERRRLQ*AKITPL
Trigger: GAGTGGTGTGATCTTGGCTCACTGCAACCTCCGCCT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426851.6
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGTGGTGGCATaGGAACACCTGCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEATVVA*EHLLAN
Trigger: GTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGGGCGCTCTTGTGCATaGCCCCGCTGGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGGRSCA*PRWWSR
Trigger: CCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGGGCCGAGTGGCCGTTaGAGTCAATGCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSGPSGR*SQCHTE
Trigger: CTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGGGCCGAGTGGCCGTTaGAGTCAATGCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEGPSGR*SQCHTE
Trigger: CTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTCACAGTGAGGACAACTaGAGGGCCGCTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIHSEDN*RAARLC
Trigger: ACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGTG...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGCCTCCATTGTGGCCTaGACGGAGGTGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSASIVA*TEVVLE
Trigger: CTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCTCCATTGTGGCCTaGACGGAGGTGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEASIVA*TEVVLE
Trigger: CTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGTTGGGTGGCTGACCTaGTGGGTCACTATCACCCCC +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIVGWLT*WVTITP
Trigger: GGGGGTGATAGTGACCCATCAGGTCAGCCACCCAAC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCA +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLGGLGG*PDGSLS
Trigger: TGATAGTGACCCATCAGGTCAGCCACCCAACCCACC...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCA +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATGGLGG*PDGSLS
Trigger: TGATAGTGACCCATCAGGTCAGCCACCCAACCCACC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCA +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCGGLGG*PDGSLS
Trigger: TGATAGTGACCCATCAGGTCAGCCACCCAACCCACC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTTTCAAGCCCAGTTATaGGGGGACCTGGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHFQAQL*GDLVGW
Trigger: CCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCAGGTGTGCCTCATTTaGTGCTGGGGGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAQVCLI*CWGCRK
Trigger: CTTCCTACACCCCCAGCAGCAAATGAGGCACACCTG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGAGATAGCTGCTGTCTaGAGGTGTGCCTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALEIAAV*RCASFA
Trigger: AGCAAATGAGGCACACCTGCAGACAGCAGCTATCTC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCCACAGAGAGATAGCTaGTGTCTGCAGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHPQRDS*CLQVCL
Trigger: GAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGTTCCTCTCTATAGCCTaGACGGCGGCCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWFLSIA*TAATTV
Trigger: GACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAA...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACATTCCTCTCTATAGCCTaGACGGCGGCCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATFLSIA*TAATTV
Trigger: GACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAA...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAGCATCCTTTGCTGCTaGTGGTGGAGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYSILCC*WWRRER
Trigger: CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCAAAAGCATCCTTTGCTaGTGCTGGTGGAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSKSILC*CWWRRE
Trigger: TTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTT...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATAGCACAGGGTAAGGGGTaGTCAGTAGCATGGCTACAT +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIAQGKG*SVAWLH
Trigger: ATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGC...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQACGVK*LGHWAQ
Trigger: CTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATGAAGGGCCTTTCGCTTaGATGAGCTCTCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHEGPFA*MSSPVA
Trigger: AGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTC...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGAAGGGCCTTTCGCTTaGATGAGCTCTCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEEGPFA*MSSPVA
Trigger: AGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGAAAGGGCGCTCTTGTaGATGACCCCGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSERALL*MTPLVE
Trigger: CTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCAAAGTTTAGGTCCCTaGTGGCTACACAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSQSLGP*WLHSSF
Trigger: AAAGGAACTGTGTAGCCAGCAGGGACCTAAACTTTG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGGAGACATCATCAAATaGCACAGGCACCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKGDIIK*HRHLEG
Trigger: TCCCTCCAGGTGCCTGTGGCATTTGATGATGTCTCC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS-3UTR GCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCTCTTGGGTGGCAAATaGGATCAGTGCTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEALLGGK*DQCFPR
Trigger: GCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGTGCCTCATTTGCTGCTaGGGGTGTAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKCLICC*GCRKRK
Trigger: CTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCA...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATATGCCTCATTTGCTGCTaGGGGTGTAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHICLICC*GCRKRK
Trigger: CTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCA...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAGGAGTCGCCGGCTGTaGATCTCCACCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATERSRRL*ISTFLS
Trigger: AGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTTCACTGGGGTCTGTaGGAATCTCACTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALLHWGL*ESHFPL
Trigger: CAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAAG...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAGGCAGGTCAGTGGCTaGACGTCCAAAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKRQVSG*TSKRCH
Trigger: ATGACACCTTTTGGACGTCCAGCCACTGACCTGCCT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTCGCCAACTGGAGGTaGGAGGGGATAGCTACCCAA +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELANWR*EGIATQ
Trigger: TTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCTCGCCAACTGGAGGTaGGAGGGGATAGCTACCCAA +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCLANWR*EGIATQ
Trigger: TTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAACACCTGCTCGCCAACTaGAGGTGGGAGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEHLLAN*RWEGIA
Trigger: AGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTG...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCVSNMS*LRFLPQ
Trigger: CTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGAC...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCT +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCVAWLH*WVSNMS
Trigger: AGACATGTTGCTGACCCACCAATGTAGCCATGCTAC...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTGGTCAGCAAAGCGCTTaGGGCAATCAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLGQQSA*GNQDRG
Trigger: TCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACC...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCACTGGTGAGTCGAGCCTaGTCAGCAAAGCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPLVSRA*SAKRLG
Trigger: CCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAG...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGTGTGGATCATCTGGTaGCGGATCAGGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIVWIIW*RIRAEW
Trigger: CCACTCGGCCCTGATCCGCCACCAGATGATCCACAC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGGACGCTCGCCTGTGTaGATCATCTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIGRSPV*IIWWRI
Trigger: GATCCGCCACCAGATGATCCACACAGGCGAGCGTCC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAACCACAGCCTCCATTGTaGCCTGAACGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEPQPPL*PERRWS
Trigger: GGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGG...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCCCCATACCACTGGTTaGTCTCTAGACCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYPHTTG*SLDLQC
Trigger: ACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTCTCCACACTTTCTGTTaGACACCTTATCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCLHTFC*TPYPSH
Trigger: GTGGGAAGGATAAGGTGTCCAACAGAAAGTGTGGAG...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 72 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATATACAAGCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: GVGWGSQTFSWI*CPAVSIYKHEA
Trigger: GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTGGCCTTTCGCTTGCATaGGCTCTCCGGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSGLSLA*ALRWLV
Trigger: CACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCC...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAAACGGAGGTGGTCCTTaGGTGTCTGTTTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQNGGGP*VSVCSG
Trigger: TCCGCTACAAACAGACACTCAAGGACCACCTCCGTT...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTGATAAGAATTTGATGTaGACGACTCTCAGAACATGG +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRADKNLM*TTLRTW
Trigger: CCATGTTCTGAGAGTCGTTCACATCAAATTCTTATC...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTTTCTGGAAAGTGCTGTaGTCTTTGTTGCTGATGATT +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRAFWKVL*SLLLMI
Trigger: AATCATCAGCAACAAAGATCACAGCACTTTCCAGAA...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTTATCATCTCACTACTaGGGACCAAGAGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCLSSHY*GPRVHW
Trigger: CCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAA...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAACATACACTCTCTCTaGTGGCTCAAGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYNIHSL*WLKEAA
Trigger: TGCAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTTCAGATGCTCCCAGGTaGTTAAATCACCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCSDAPR*LNHPKK
Trigger: TTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGA...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAAAGGCTGACAGATaGAGAGCACGTTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIQKADR*RARFWG
Trigger: ACCCCAGAAACGTGCTCTTCATCTGTCAGCCTTTTG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCACTACGTCCTCTCGCTaGCTCTCAGTCCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCTTSSR*LSVRVS
Trigger: AGAAACCCGGACTGAGAGGCAGCGAGAGGACGTAGT...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426851.6
CDS-3UTR GCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCAGGTGTGCCTCATTTaGTGCTGGGGGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLQVCLI*CWGCRK
Trigger: CTTCCTACACCCCCAGCAGCAAATGAGGCACACCTG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGAGATAGCTGCTGTCTaGAGGTGTGCCTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAEIAAV*RCASFA
Trigger: AGCAAATGAGGCACACCTGCAGACAGCAGCTATCTC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGAGATAGCTGCTGTCTaGAGGTGTGCCTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKEIAAV*RCASFA
Trigger: AGCAAATGAGGCACACCTGCAGACAGCAGCTATCTC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCACAGAGAGATAGCTaGTGTCTGCAGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCPQRDS*CLQVCL
Trigger: GAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGTCATGGATGTAGACTaGTGGCTTTTGAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCVMDVD*WLLKAT
Trigger: TGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGAC...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCTGGCATGAGAACACCTaGTCGCCAACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSWHENT*SPTGGG
Trigger: CCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCA...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCACAGGGTAAGGGGTaGTCAGTAGCATGGCTACAT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHAQGKG*SVAWLH
Trigger: ATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATACGVK*LGHWAQ
Trigger: CTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCCGGTGGTTCAGCAGGTaGTCCTTGCGCATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSRWFSR*SLRMKL
Trigger: GAGCTTCATGCGCAAGGAGCACCTGCTGAACCACCG...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATATCTCCCTTAATACCTaGAGGGAGCCGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHISLNT*REPQDP
Trigger: TGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGAT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATAATCTCACTTTCCTCTaGCCCTGCCTGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHNLTFL*PCLVLC
Trigger: ACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACTTCAGGCAGGTCAGTaGCTGGACGTCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATLQAGQ*LDVQKV
Trigger: CACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTTCTTGCCACAGTGGTaGCATGAGAACACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHFLPQW*HENTCS
Trigger: CGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAAGATTCTTGCCACAGTaGTGGCATGAGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQARFLPQ*WHENTC
Trigger: GCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALVSNMS*LRFLPQ
Trigger: CTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGAC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEGCSVA*LHWWVS
Trigger: GCTGACCCACCAATGTAGCCATGCTACTGAGCACCC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAATGGCCTGAACGGAGGTaGTCCTTGAGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQWPERR*SLSVCL
Trigger: CAAACAGACACTCAAGGACCACCTCCGTTCAGGCCA...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCACCCCATACCACTGGTTaGTCTCTAGACCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAPHTTG*SLDLQC
Trigger: ACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGG...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCCTTCCCCATACCACTaGTTGGTCTCTAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKPSPYH*LVSRPS
Trigger: TGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGG...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAACTGTGGGTGTTGGATaGGGCTCACAGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQTVGVG*GSQTFS
Trigger: AGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTCAGCAACATAAACAGTaGCTTAAGCACTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SVSLGWPCTSPFVPSEGSQQHKQ*LKHFLQ
Trigger: TTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTG...AGAGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCTCCACACTTTCTGTTaGACACCTTATCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYLHTFC*TPYPSH
Trigger: GTGGGAAGGATAAGGTGTCCAACAGAAAGTGTGGAG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 72 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGTGAGCATATACAAGCA +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLL*DFVPCCEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKHNPWR*ETRSCP
Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIHNPWR*ETRSCP
Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTGTTGGGTGGCTGACCTaGTGGGTCACTATCACCCCC +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSVGWLT*WVTITP
Trigger: GGGGGTGATAGTGACCCATCAGGTCAGCCACCCAAC...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCA +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISGGLGG*PDGSLS
Trigger: TGATAGTGACCCATCAGGTCAGCCACCCAACCCACC...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCATTTCAAGCCCAGTTATaGGGGGACCTGGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPFQAQL*GDLVGW
Trigger: CCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAA...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCTAGACCTTCAGTGTTaGCACCCAGGCCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHLDLQC*HPGQKF
Trigger: AAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCATTCTCATGCCTTATaGTGGGCTTCCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYHSHAL*WASSFG
Trigger: TCCAAAACTGGAAGCCCATCATAAGGCATGAGAATG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTTCTGGAAAGTGCTGTaGTCTTTGTTGCTGATGATT +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLFWKVL*SLLLMI
Trigger: AATCATCAGCAACAAAGATCACAGCACTTTCCAGAA...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGTGTGCCTCATTTGCTaGTGGGGGTGTAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIVCLIC*WGCRKR
Trigger: CCTCTTCCTACACCCCCAGCAGCAAATGAGGCACAC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCTAGAGGTTAAATCCTaGTTTCCAACCTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYLEVKS*FPTSPQ
Trigger: TTGCGGAGAGGTTGGAAAGCAGGATTTAACCTCTAG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTACAAACTGTTGTCTATaGATGGTGCTTAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCTNCCL*MVLSSQ
Trigger: CTGAGAGCTAAGCACCATGCATAGACAACAGTTTGT...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGAATATGCTAGGGTATTaGCCATCATGTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLNMLGY*PSCLVL
Trigger: CAGAACAAGACATGATGGGCAATACCCTAGCATATT...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATATCTCCCTTAATACCTaGAGGGAGCCGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHISLNT*REPQDP
Trigger: TGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGAT...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACATCCTCTGGCCCTGCCTaGTCCTCTGTATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATSSGPA*SSVLCS
Trigger: GGAACATAATACAGAGGACCAGGCAGGGCCAGAGGA...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCAATCTCACTTTCCTCTaGCCCTGCCTGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCNLTFL*PCLVLC
Trigger: ACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATT...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAATCTCACTTTCCTCTaGCCCTGCCTGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATENLTFL*PCLVLC
Trigger: ACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCTTCACTGGGGTCTGTaGGAATCTCACTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEALHWGL*ESHFPL
Trigger: CAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAAG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTCTTTGCTGCTGCTGGTaGAGAAGAGAAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLLCCCW*RRERDW
Trigger: CCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAG...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTTTGCTGCTGCTGGTaGAGAAGAGAAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELCCCW*RRERDW
Trigger: CCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCAGGCAGGTCAGTGGCTaGACGTCCAAAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCRQVSG*TSKRCH
Trigger: ATGACACCTTTTGGACGTCCAGCCACTGACCTGCCT...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTCACCTGCTCGCCAACTaGAGGTGGGAGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSHLLAN*RWEGIA
Trigger: AGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTG...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGTTCTTGCCACAGTGGTaGCATGAGAACACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEFLPQW*HENTCS
Trigger: CGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAA...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAVSNMS*LRFLPQ
Trigger: CTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGAC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQAWLHW*VSNMSW
Trigger: CCAAGACATGTTGCTGACCCACCAATGTAGCCATGC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHAWLHW*VSNMSW
Trigger: CCAAGACATGTTGCTGACCCACCAATGTAGCCATGC...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCGCTGAGGTCCGCCTGTaGAGTAAAGTGCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSAEVRL*SKVLRA
Trigger: TGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGC...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGTGTCTCGCTGGCATaGTCCTGGGAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVGVSLA*SWEVLL
Trigger: CAGCAGCACCTCCCAGGACCATGCCAGCGAGACACC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCCCCATACCACTGGTTaGTCTCTAGACCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHPHTTG*SLDLQC
Trigger: ACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGG...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAACTGTGGGTGTTGGATaGGGCTCACAGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATTVGVG*GSQTFS
Trigger: AGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGAAAAGATGGACATGCTaGGCTCCTTTCCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALKRWTC*APFQVF
Trigger: AAAGACCTGGAAAGGAGCCCAGCATGTCCATCTTTT...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTCTGCTTCCGTCTCTCTaGGATGGCCTTGCACATCGC +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISLLPSL*DGLAHR
Trigger: GCGATGTGCAAGGCCATCCCAGAGAGACGGAAGCAG...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGGCAACATGTCTTGGCTaGGATTCTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLATCLG*DSCHSG
Trigger: ACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGC...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGCAACATGTCTTGGCTaGGATTCTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATATCLG*DSCHSG
Trigger: ACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACATGGTAGGTAAGTCTTaGTGGGTGAGTAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYMVGKS*WVSKSP
Trigger: AGGACTTTTACTCACCCATCAAGACTTACCTACCAT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAAACGGAGGTGGTCCTTaGGTGTCTGTTTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHENGGGP*VSVCSG
Trigger: TCCGCTACAAACAGACACTCAAGGACCACCTCCGTT...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGCTAGACCTTCAGTGTTaGCACCCAGGCCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWLDLQC*HPGQKF
Trigger: AAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAG...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTAGTGGGTTGCCAATaGAGCCAGAACCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELVGCQ*SQNLGF
Trigger: AAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATACCCTGGCAAATGCTTaGAATCCACTCAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHTLANA*NPLRKG
Trigger: CCCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGGCCTTTCGTTCCATCTaGGGGCTCTTCCTTCATTCG +
Preference number: 4 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKAFRSI*GLFLHS
Trigger: CGAATGAAGGAAGAGCCCTCAGATGGAACGAAAGGC...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTGGGTCTGGTCCTGGTTaGGATAGACATGAACATCAC +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPGSGPG*DRHEHH
Trigger: GTGATGTTCATGTCTATCTCAACCAGGACCAGACCC...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR GCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATAAAAAGCATCCTTTGCTaGTGCTGGTGGAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIKSILC*CWWRRE
Trigger: TTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTT...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATAGTCATGGATGTAGACTaGTGGCTTTTGAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIVMDVD*WLLKAT
Trigger: TGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGAC...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGCACAGGGTAAGGGGTaGTCAGTAGCATGGCTACAT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIAQGKG*SVAWLH
Trigger: ATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACTTGGATTTTGTGCCCTaGTGTGAGCATATACAAGCA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYLDFVP*CEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAA...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCCTCAATCTGTCCACTaGCAATGGGATACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEPQSVH*QWDTAR
Trigger: TCTGGCTGTATCCCATTGGCAGTGGACAGATTGAGG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAAGGAGCAGACTCAGATaGTCCCAGGTGATTAAATCA +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQARSRLR*SQVIKS
Trigger: TGATTTAATCACCTGGGAGCATCTGAGTCTGCTCCT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCTTCTAGTGTTGTTATaGATAACTAGAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRALLVLL*ITRESE
Trigger: TTCACTCTCTCTAGTTATGCATAACAACACTAGAAG...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCATTGTGTTCACTTTTTaGCAAAGTTTAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCIVFTF*QSLGPC
Trigger: GCAGGGACCTAAACTTTGGCAAAAAGTGAACACAAT...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCTCTCTGGGATGGCCTTaGACATCGCCTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSSLGWP*TSPFVP
Trigger: TGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGA...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACGTGCCCAGTACAATTaGTCTCCTAGAGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATRAQYN*SPRGDQ
Trigger: TTGGTCACCTCTAGGAGAGCAATTGTACTGGGCACG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS-3UTR CCA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCATGCCTCATTTGCTGCTaGGGGTGTAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPCLICC*GCRKRK
Trigger: CTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCA...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAATCTCCCTTAATACCTaGAGGGAGCCGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEISLNT*REPQDP
Trigger: TGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGAT...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTGCCACAGGCACCTTTaGGATATCTCCCTTAATACC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHCHRHL*DISLNT
Trigger: GGTATTAAGGGAGATATCCCAAAGGTGCCTGTGGCA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTAGGCAGGTCAGTGGCTaGACGTCCAAAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIRQVSG*TSKRCH
Trigger: ATGACACCTTTTGGACGTCCAGCCACTGACCTGCCT...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTTCAGGCAGGTCAGTaGCTGGACGTCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLQAGQ*LDVQKV
Trigger: CACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAATTCTTGCCACAGTGGTaGCATGAGAACACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEFLPQW*HENTCS
Trigger: CGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAA...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGAGATTCTTGCCACAGTaGTGGCATGAGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWRFLPQ*WHENTC
Trigger: GCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCT...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLAWLHW*VSNMSW
Trigger: CCAAGACATGTTGCTGACCCACCAATGTAGCCATGC...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEAWLHW*VSNMSW
Trigger: CCAAGACATGTTGCTGACCCACCAATGTAGCCATGC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTGCTGAGGTCCGCCTGTaGAGTAAAGTGCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISAEVRL*SKVLRA
Trigger: TGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGC...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTCACAGTGTGGGCAGGTaGGGGGTGTCTCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCHSVGR*GVSRWH
Trigger: ATGCCAGCGAGACACCCCCCACCTGCCCACACTGTG...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTCTGGTGAGTCGAGCCTaGTCAGCAAAGCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGLVSRA*SAKRLG
Trigger: CCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAG...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTCCTGTGTGGATCATCTaGTGGCGGATCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGPVWII*WRIRAE
Trigger: CTCGGCCCTGATCCGCCACCAGATGATCCACACAGG...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACCTTCCCCATACCACTaGTTGGTCTCTAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATPSPYH*LVSRPS
Trigger: TGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTTCCCCATACCACTaGTTGGTCTCTAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCPSPYH*LVSRPS
Trigger: TGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAAATTACTGTGGGTGTTaGATGGGGCTCACAGACCTT +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQNYCGC*MGLTDL
Trigger: AAGGTCTGTGAGCCCCATCCAACACCCACAGTAATT...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCTCCGTCTCTCTGGGATaGCCTTGCACATCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EQTVVYAWCLALSDLGISSVSLG*PCTSPF
Trigger: GAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CCAAGAAAAGAACATGTGGTAGTCAAAGTCCCTAAAAGCAACACAGGCAAGAACTCCGTCTCTCTGGGATaGCCTTGCACATCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PRKEHVVVKVPKSNTGKNSVSLG*PCTSPF
Trigger: GAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGA...GTTCTTGCCTGTGTTGCTTTTAGGGACTTTGACTACCACATGTTCTTTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACCGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYRSCPS*YSCKVP
Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGCAACATGTCTTGGCTaGGATTCTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIATCLG*DSCHSG
Trigger: ACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGGTAAGTCTTGATGGGTaGGTAAAAGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLVSLDG*VKVLAQ
Trigger: CTGTGCCAGGACTTTTACTCACCCATCAAGACTTAC...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTAAGTCAATGCCACACTaGGGGCAGGAGAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVKSMPH*GQEKGR
Trigger: GCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTT...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAATTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAACTAGGCAGGCAGTCTTaGGTTACCATGTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHELGRQS*VTMFQG
Trigger: TCCCTGAAACATGGTAACTCAAGACTGCCTGCCTAG...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTTTCACTGGCACTTTCTaGAGCTCCATGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPFTGTF*SSMLLE
Trigger: TTCCAGAAGCATGGAGCTTCAGAAAGTGCCAGTGAA...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCTACAGCCAGATAGGGTaGACATACACTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAYSQIG*TYTLSD
Trigger: ATCAGAGAGAGTGTATGTTCACCCTATCTGGCTGTA...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGTGCTTAGCTCTCAGTaGTCTAGGAATTTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAVLSSQ*SRNFLN
Trigger: ATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCAC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCACTAGTGGGTTGCCAATaGAGCCAGAACCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPLVGCQ*SQNLGF
Trigger: AAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAG...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCTTTTATTCTTGGGCTaGGGCTTAGTATCGCACCTG +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLLLFLG*GLVSHL
Trigger: CAGGTGCGATACTAAGCCTCAGCCCAAGAATAAAAG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGCTAACCTCCGGCCTTaGATCAGTCCAATCATTCTT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATANLRP*ISPIIL
Trigger: AAGAATGATTGGACTGATTCAAGGCCGGAGGTTAGC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGAGATAGCTGCTGTCTaGAGGTGTGCCTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIEIAAV*RCASFA
Trigger: AGCAAATGAGGCACACCTGCAGACAGCAGCTATCTC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGATTCCTCTCTATAGCCTaGACGGCGGCCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRFLSIA*TAATTV
Trigger: GACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAA...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCAGCATCCTTTGCTGCTaGTGGTGGAGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSSILCC*WWRRER
Trigger: CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCT...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTAGCATCCTTTGCTGCTaGTGGTGGAGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEISILCC*WWRRER
Trigger: CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCT...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGGGAAAGGACGCTCAGTaGTGTTATGGACCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKGKDAQ*CYGPED
Trigger: ATCTTCGGGTCCATAACAGCACTGAGCGTCCTTTCC...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGGAAAGGACGCTCAGTaGTGTTATGGACCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIGKDAQ*CYGPED
Trigger: ATCTTCGGGTCCATAACAGCACTGAGCGTCCTTTCC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATATTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATAC +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIFSWIL*PAVSIY
Trigger: GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGATTGTGTTCACTTTTTaGCAAAGTTTAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALIVFTF*QSLGPC
Trigger: GCAGGGACCTAAACTTTGGCAAAAAGTGAACACAAT...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTTGCCTCATTTGCTGCTaGGGGTGTAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLCLICC*GCRKRK
Trigger: CTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCA...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTTCCTCTGGCCCTGCCTaGTCCTCTGTATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISSSGPA*SSVLCS
Trigger: GGAACATAATACAGAGGACCAGGCAGGGCCAGAGGA...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTTCCTCTGGCCCTGCCTaGTCCTCTGTATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLSSGPA*SSVLCS
Trigger: GGAACATAATACAGAGGACCAGGCAGGGCCAGAGGA...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTCTTTGCTGCTGCTGGTaGAGAAGAGAAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISLCCCW*RRERDW
Trigger: CCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAG...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTTTGCTGCTGCTGGTaGAGAAGAGAAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLCCCW*RRERDW
Trigger: CCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCTTCTTGCCACAGTGGTaGCATGAGAACACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: EQTVVYAWCLALSDLGISFLPQW*HENTCS
Trigger: CGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAA...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAAGATTCTTGCCACAGTaGTGGCATGAGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHERFLPQ*WHENTC
Trigger: GCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCT...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEVSNMS*LRFLPQ
Trigger: CTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGAC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEVAWLH*WVSNMS
Trigger: AGACATGTTGCTGACCCACCAATGTAGCCATGCTAC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTCTGGTGAGTCGAGCCTaGTCAGCAAAGCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCLVSRA*SAKRLG
Trigger: CCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAG...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTCGGATCAGGGCCGAGTaGCCGTTGAAGTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVRIRAE*PLKSMP
Trigger: TGGCATTGACTTCAACGGCCACTCGGCCCTGATCCG...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTCCACAGCCTCCATTGTaGCCTGAACGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCPQPPL*PERRWS
Trigger: GGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGG...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAATTACTGTGGGTGTTaGATGGGGCTCACAGACCTT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATENYCGC*MGLTDL
Trigger: AAGGTCTGTGAGCCCCATCCAACACCCACAGTAATT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCCTTTCCAGGTCTTTCTaGGTTTCAAAATGTGGTATT +
Preference number: 4 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCLSRSF*VSKCGI
Trigger: AATACCACATTTTGAAACCCAGAAAGACCTGGAAAG...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGGACCAAGAGTTCACTaGCACTTTCTGAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEGPRVH*HFLKLH
Trigger: ATGGAGCTTCAGAAAGTGCCAGTGAACTCTTGGTCC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGTCCTCCAGCATACCCTaGCAAATGCTTGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLSSSIP*QMLEIH
Trigger: GTGGATTTCAAGCATTTGCCAGGGTATGCTGGAGGA...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAACACTCTTTGGAACTaGCCTGCAGTTCTAACTGAT +
Preference number: 4 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKNTLWN*PAVLTD
Trigger: ATCAGTTAGAACTGCAGGCCAGTTCCAAAGAGTGTT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCCACTCTAAGGGAATaGTGCTTATGTGTGATAGTG +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQASTLRE*CLCVIV
Trigger: CACTATCACACATAAGCACCATTCCCTTAGAGTGGA...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 72 bp ACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTaGCCAATGAAGCCAGAACCTTGGCTTTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: TRAESHIQVPSG*PMKPEPWLWDS
Trigger: GGAATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIRSCPS*YSCKVP
Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGTGGGGCCCCAACCTaGGGCTCTTCTTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVGGAPT*GSSSCL
Trigger: TAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGTAAGTCTTGATGGGTaGGTAAAAGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEVSLDG*VKVLAQ
Trigger: CTGTGCCAGGACTTTTACTCACCCATCAAGACTTAC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATATGGTAGGTAAGTCTTaGTGGGTGAGTAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHMVGKS*WVSKSP
Trigger: AGGACTTTTACTCACCCATCAAGACTTACCTACCAT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTAGACCTTCAGTGTTaGCACCCAGGCCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLDLQC*HPGQKF
Trigger: AAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGTTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACATTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACATTCTTGTAAGGGTGTaGAATTCCAAAACACAAGCA +
Preference number: 4 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYILVRV*NSKTQA
Trigger: TGCTTGTGTTTTGGAATTTCACACCCTTACAAGAAT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATTTATCATCTCACTACTaGGGACCAAGAGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHLSSHY*GPRVHW
Trigger: CCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAA...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTCCTTATCCTTCCCACTaGTCCATTTTACTTACCCAC +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPPYPSH*SILLTH
Trigger: GTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGG...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAACAAAAGGCTGACAGATaGAGAGCACGTTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSEQKADR*RARFWG
Trigger: ACCCCAGAAACGTGCTCTTCATCTGTCAGCCTTTTG...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGGGAAAGGACGCTCAGTaGTGTTATGGACCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWGKDAQ*CYGPED
Trigger: ATCTTCGGGTCCATAACAGCACTGAGCGTCCTTTCC...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTTGGATTTTGTGCCCTaGTGTGAGCATATACAAGCA +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHLDFVP*CEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCCCTCAATCTGTCCACTaGCAATGGGATACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EQTVVYAWCLALSDLGISPQSVH*QWDTAR
Trigger: TCTGGCTGTATCCCATTGGCAGTGGACAGATTGAGG...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAGGAGCAGACTCAGATaGTCCCAGGTGATTAAATCA +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATERSRLR*SQVIKS
Trigger: TGATTTAATCACCTGGGAGCATCTGAGTCTGCTCCT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGGCSVA*LHWWVS
Trigger: GCTGACCCACCAATGTAGCCATGCTACTGAGCACCC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAATGGGCTTCCAGTTTTaGAGGCTCTTCTCATGTATC +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATMGFQF*RLFSCI
Trigger: GATACATGAGAAGAGCCTCCAAAACTGGAAGCCCAT...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTATCAGACACCAGGAATaGAGAAGCCAACTTACTGGC +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIIRHQE*RSQLTG
Trigger: GCCAGTAAGTTGGCTTCTCCATTCCTGGTGTCTGAT...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCATCAGACACCAGGAATaGAGAAGCCAACTTACTGGC +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSIRHQE*RSQLTG
Trigger: GCCAGTAAGTTGGCTTCTCCATTCCTGGTGTCTGAT...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATACTGTTGTCTATGCATaGTGCTTAGCTCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDTVVYA*CLALSD
Trigger: ATCACTGAGAGCTAAGCACCATGCATAGACAACAGT...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGTCCTCCAGCATACCCTaGCAAATGCTTGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKSSSIP*QMLEIH
Trigger: GTGGATTTCAAGCATTTGCCAGGGTATGCTGGAGGA...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATATAGTGACAGCTTCTTaGTCCAAAAGGCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHIVTAS*SKRLTD
Trigger: ATCTGTCAGCCTTTTGGACCAAGAAGCTGTCACTAT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAAACGGAGGTGGTCCTTaGGTGTCTGTTTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRNGGGP*VSVCSG
Trigger: TCCGCTACAAACAGACACTCAAGGACCACCTCCGTT...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGTGCTTAGCTCTCAGTaGTCTAGGAATTTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATVLSSQ*SRNFLN
Trigger: ATTGAGGAAATTCCTAGATCACTGAGAGCTAAGCAC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCTTATCCTTCCCACTaGTCCATTTTACTTACCCAC +
Preference number: 4 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKPYPSH*SILLTH
Trigger: GTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGG...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTTGGTCCAAAAGGCTaGCAGATGAAGAGCACGTTT +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLGPKG*QMKSTF
Trigger: AAACGTGCTCTTCATCTGTCAGCCTTTTGGACCAAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGAAAAGCATCCTTTGCTaGTGCTGGTGGAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKKSILC*CWWRRE
Trigger: TTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTT...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGTTGGATTTTGTGCCCTaGTGTGAGCATATACAAGCA +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLLDFVP*CEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAA...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCTTGGATTTTGTGCCCTaGTGTGAGCATATACAAGCA +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCLDFVP*CEHIQA
Trigger: TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAA...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGTTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATAC +
Preference number: 4 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWFSWIL*PAVSIY
Trigger: GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAATGGCTCAAGGAAGCTaGATTATAACACTGTTATCA +
Preference number: 4 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAMAQGS*IITLLS
Trigger: TGATAACAGTGTTATAATGCAGCTTCCTTGAGCCAT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTGTTGTCTATGCATGGTaGTTAGCTCTCAGTGATCTA +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPVVYAW*LALSDL
Trigger: TAGATCACTGAGAGCTAAGCACCATGCATAGACAAC...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCAATATGCTAGGGTATTaGCCATCATGTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTFSWILCPAVSIYKHEANMLGY*PSCLVL
Trigger: CAGAACAAGACATGATGGGCAATACCCTAGCATATT...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTTCTCTGGGATGGCCTTaGACATCGCCTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVSLGWP*TSPFVP
Trigger: TGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGA...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAATCACTTCTCAGATATaGTCAAGAGAAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEITSQI*SREAQQ
Trigger: CTGCTGGGCTTCTCTTGAGCATATCTGAGAAGTGAT...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGTTTCCCACTCTGGAGTaGAAAAGTAGATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATEFPTLE*KSRWRH
Trigger: ATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAA...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTAATCTCACTTTCCTCTaGCCCTGCCTGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGNLTFL*PCLVLC
Trigger: ACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATT...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCT +
Preference number: 4 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWVAWLH*WVSNMS
Trigger: AGACATGTTGCTGACCCACCAATGTAGCCATGCTAC...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTTGGCCTGAACGGAGGTaGTCCTTGAGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGWPERR*SLSVCL
Trigger: CAAACAGACACTCAAGGACCACCTCCGTTCAGGCCA...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTACTGTGGGTGTTGGATaGGGCTCACAGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVTVGVG*GSQTFS
Trigger: AGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGT...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CCAAGAAAAGAACATGTGGTAGTCAAAGTCCCTAAAAGCAACACAGGCAAGAACGGACCAAGAGTTCACTaGCACTTTCTGAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PRKEHVVVKVPKSNTGKNGPRVH*HFLKLH
Trigger: ATGGAGCTTCAGAAAGTGCCAGTGAACTCTTGGTCC...GTTCTTGCCTGTGTTGCTTTTAGGGACTTTGACTACCACATGTTCTTTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCGTCTCCCATGGTCCCTaGTATTGTGAATGTCATGGA +
Preference number: 4 (lower is better)
Translates to: EQTVVYAWCLALSDLGISVSHGP*YCECHG
Trigger: TCCATGACATTCACAATACCAGGGACCATGGGAGAC...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAATAGTGACAGCTTCTTaGTCCAAAAGGCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATIVTAS*SKRLTD
Trigger: ATCTGTCAGCCTTTTGGACCAAGAAGCTGTCACTAT...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCTCCACTCTAAGGGAATaGTGCTTATGTGTGATAGTG +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCSTLRE*CLCVIV
Trigger: CACTATCACACATAAGCACCATTCCCTTAGAGTGGA...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTGTTATAGTCAACACCTaGATCCACTCTAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLVIVNT*IHSKGM
Trigger: CATTCCCTTAGAGTGGATCCAGGTGTTGACTATAAC...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCTTTTGTTGTATCTTTaGAAAGATGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCLLLYL*KDGHAG
Trigger: CCCAGCATGTCCATCTTTTCAAAGATACAACAAAAG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTCATTCTCATGCCTTATaGTGGGCTTCCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISHSHAL*WASSFG
Trigger: TCCAAAACTGGAAGCCCATCATAAGGCATGAGAATG...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGATCTTGGCTGGTTTTaGGAGAGGAGGCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGDLGWF*ERRQQH
Trigger: ATGTTGCTGCCTCCTCTCTCAAAACCAGCCAAGATC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTTTCACTGGCACTTTCTaGAGCTCCATGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSFTGTF*SSMLLE
Trigger: TTCCAGAAGCATGGAGCTTCAGAAAGTGCCAGTGAA...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAATACAGCCAGATAGGGTaGACATACACTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSEYSQIG*TYTLSD
Trigger: ATCAGAGAGAGTGTATGTTCACCCTATCTGGCTGTA...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTATCTTGTCTGGTCATaGCAAGCAGTTCTCATGTAT +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLYLVWS*QAVLMY
Trigger: ATACATGAGAACTGCTTGTCATGACCAGACAAGATA...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATCTTCATCAGCATAAGTaGTTTTGTACACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHLHQHK*FCTRHS
Trigger: AGAGTGACGTGTACAAAAGCACTTATGCTGATGAAG...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACTTCATCAGCATAAGTaGTTTTGTACACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TFSWILCPAVSIYKHEATLHQHK*FCTRHS
Trigger: AGAGTGACGTGTACAAAAGCACTTATGCTGATGAAG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCTTCATCAGCATAAGTaGTTTTGTACACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCLHQHK*FCTRHS
Trigger: AGAGTGACGTGTACAAAAGCACTTATGCTGATGAAG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTAAAAGCATCCTTTGCTaGTGCTGGTGGAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISKSILC*CWWRRE
Trigger: TTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTT...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAAGTCATGGATGTAGACTaGTGGCTTTTGAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSEVMDVD*WLLKAT
Trigger: TGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGAC...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PYHFIKKISCLNISRPCSACGVK*LGHWAQ
Trigger: CTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGC...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATAC +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIFSWIL*PAVSIY
Trigger: GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAATTCTCTTGGATTTTGTaGCCTGCTGTGAGCATATAC +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEFSWIL*PAVSIY
Trigger: GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR GCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTGCATACCCTGGCAAATaGTTGAAATCCACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIAYPGK*LKSTQK
Trigger: TTTCTGAGTGGATTTCAAGCATTTGCCAGGGTATGC...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GAACAAACTGTTGTCTATGCATGGTGCTTAGCTCTCAGTGATCTAGGAATTTCCCAAAGTTTAGGTCCCTaGTGGCTACACAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EQTVVYAWCLALSDLGISQSLGP*WLHSSF
Trigger: AAAGGAACTGTGTAGCCAGCAGGGACCTAAACTTTG...GGAAATTCCTAGATCACTGAGAGCTAAGCACCATGCATAGACAACAGTTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTTTCCCACTCTGGAGTaGAAAAGTAGATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIFPTLE*KSRWRH
Trigger: ATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAA...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTCCCCATACCACTGGTTaGTCTCTAGACCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGPHTTG*SLDLQC
Trigger: ACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGG...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTAATTACTGTGGGTGTTaGATGGGGCTCACAGACCTT +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSNYCGC*MGLTDL
Trigger: AAGGTCTGTGAGCCCCATCCAACACCCACAGTAATT...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTCTGGGTTTCAAAATGTaGTATTCTTGTAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLLGFKM*YSCKGV
Trigger: CACACCCTTACAAGAATACCACATTTTGAAACCCAG...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTTATTTAGCTTTGCCTaGACAGAAGCCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLLFSFA*TEAKDR
Trigger: TCTGTCTTTGGCTTCTGTCCAGGCAAAGCTAAATAA...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGTTATTTAGCTTTGCCTaGACAGAAGCCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLLFSFA*TEAKDR
Trigger: TCTGTCTTTGGCTTCTGTCCAGGCAAAGCTAAATAA...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTTATTTTCACAACTGTaGCTAAACCAGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHLFSQL*LNQRFI
Trigger: GATGAACCTCTGGTTTAGCCACAGTTGTGAAAATAA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTCGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIRSCPS*YSCKVP
Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR TCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGACATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRHNPWR*ETRSCP
Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTAAGTCTTGATGGGTaGGTAAAAGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGVSLDG*VKVLAQ
Trigger: CTGTGCCAGGACTTTTACTCACCCATCAAGACTTAC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTATGGTAGGTAAGTCTTaGTGGGTGAGTAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLMVGKS*WVSKSP
Trigger: AGGACTTTTACTCACCCATCAAGACTTACCTACCAT...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCATTCTTGTAAGGGTGTaGAATTCCAAAACACAAGCA +
Preference number: 4 (lower is better)
Translates to: IITVGVGWGSQTFSWILCILVRV*NSKTQA
Trigger: TGCTTGTGTTTTGGAATTTCACACCCTTACAAGAAT...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAAACATACACTCTCTCTaGTGGCTCAAGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRNIHSL*WLKEAA
Trigger: TGCAGCTTCCTTGAGCCATCAGAGAGAGTGTATGTT...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTATCTTGTCTGGTCATaGCAAGCAGTTCTCATGTAT +
Preference number: 4 (lower is better)
Translates to: SWILCPAVSIYKHEATEIYLVWS*QAVLMY
Trigger: ATACATGAGAACTGCTTGTCATGACCAGACAAGATA...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ACTGTGGCTAAACCAGAGGTTCATCCAATGGTGACAATGGAAAACCTAGTAAGCCTTCATCAGCATAAGTaGTTTTGTACACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TVAKPEVHPMVTMENLVSLHQHK*FCTRHS
Trigger: AGAGTGACGTGTACAAAAGCACTTATGCTGATGAAG...GCTTACTAGGTTTTCCATTGTCACCATTGGATGAACCTCTGGTTTAGCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTAGCATCCTTTGCTGCTaGTGGTGGAGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCSILCC*WWRRER
Trigger: CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCT...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTCTAGAGGTTAAATCCTaGTTTCCAACCTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSLEVKS*FPTSPQ
Trigger: TTGCGGAGAGGTTGGAAAGCAGGATTTAACCTCTAG...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATATGGCTCAAGGAAGCTaGATTATAACACTGTTATCA +
Preference number: 4 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHMAQGS*IITLLS
Trigger: TGATAACAGTGTTATAATGCAGCTTCCTTGAGCCAT...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CCAAGAAAAGAACATGTGGTAGTCAAAGTCCCTAAAAGCAACACAGGCAAGAACACAAACTGTTGTCTATaGATGGTGCTTAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRKEHVVVKVPKSNTGKNTNCCL*MVLSSQ
Trigger: CTGAGAGCTAAGCACCATGCATAGACAACAGTTTGT...GTTCTTGCCTGTGTTGCTTTTAGGGACTTTGACTACCACATGTTCTTTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAACTCTAAGGGAATGGTaGTTATGTGTGATAGTGACA +
Preference number: 4 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPTLREW*LCVIVT
Trigger: TGTCACTATCACACATAAGCACCATTCCCTTAGAGT...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGATGCCACAGGCACCTTTaGGATATCTCCCTTAATACC +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRCHRHL*DISLNT
Trigger: GGTATTAAGGGAGATATCCCAAAGGTGCCTGTGGCA...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTTGCCACAGGCACCTTTaGGATATCTCCCTTAATACC +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGCHRHL*DISLNT
Trigger: GGTATTAAGGGAGATATCCCAAAGGTGCCTGTGGCA...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTTTTCCCACTCTGGAGTaGAAAAGTAGATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISFPTLE*KSRWRH
Trigger: ATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAA...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCT +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGVAWLH*WVSNMS
Trigger: AGACATGTTGCTGACCCACCAATGTAGCCATGCTAC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTCCTTCCCCATACCACTaGTTGGTCTCTAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCPSPYH*LVSRPS
Trigger: TGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGG...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTCTTTCCAGGTCTTTCTaGGTTTCAAAATGTGGTATT +
Preference number: 4 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPLSRSF*VSKCGI
Trigger: AATACCACATTTTGAAACCCAGAAAGACCTGGAAAG...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAACAGCAACATAAACAGTaGCTTAAGCACTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEQQHKQ*LKHFLQ
Trigger: TTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTG...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTGTTATAGTCAACACCTaGATCCACTCTAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: GFPFPILSGHDKQFSCISVIVNT*IHSKGM
Trigger: CATTCCCTTAGAGTGGATCCAGGTGTTGACTATAAC...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGTTATTTTCACAACTGTaGCTAAACCAGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FSWILCPAVSIYKHEATELFSQL*LNQRFI
Trigger: GATGAACCTCTGGTTTAGCCACAGTTGTGAAAATAA...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAACGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSERSCPS*YSCKVP
Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTTTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGFCALL*AYTSMK
Trigger: CTTCATGCTTGTATATGCTCACAGCAGGGCACAAAA...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTCATGGATGTAGACTaGTGGCTTTTGAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGVMDVD*WLLKAT
Trigger: TGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGAC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR GCA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTCTTCTAGTGTTGTTATaGATAACTAGAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLLLVLL*ITRESE
Trigger: TTCACTCTCTCTAGTTATGCATAACAACACTAGAAG...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAAACTCTAAGGGAATGGTaGTTATGTGTGATAGTGACA +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSETLREW*LCVIVT
Trigger: TGTCACTATCACACATAAGCACCATTCCCTTAGAGT...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAAAAAGATGGACATGCTaGGCTCCTTTCCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRKRWTC*APFQVF
Trigger: AAAGACCTGGAAAGGAGCCCAGCATGTCCATCTTTT...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAATGGGCTTCCAGTTTTaGAGGCTCTTCTCATGTATC +
Preference number: 4 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRMGFQF*RLFSCI
Trigger: GATACATGAGAAGAGCCTCCAAAACTGGAAGCCCAT...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTAACACTCTTTGGAACTaGCCTGCAGTTCTAACTGAT +
Preference number: 4 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSNTLWN*PAVLTD
Trigger: ATCAGTTAGAACTGCAGGCCAGTTCCAAAGAGTGTT...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTATGGTAGGTAAGTCTTaGTGGGTGAGTAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVMVGKS*WVSKSP
Trigger: AGGACTTTTACTCACCCATCAAGACTTACCTACCAT...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR TCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTTCAGATGCTCCCAGGTaGTTAAATCACCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCSDAPR*LNHPKK
Trigger: TTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGA...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTAATAAACCAGTTTCCTaGCCAAGATGTAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLNKPVS*PRCKTS
Trigger: AGAAGTCTTACATCTTGGGCAGGAAACTGGTTTATT...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR GCA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAAAATAAACCAGTTTCCTaGCCAAGATGTAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: NTVIISLLRTKSSLALSENKPVS*PRCKTS
Trigger: AGAAGTCTTACATCTTGGGCAGGAAACTGGTTTATT...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
3UTR CAA 72 bp CTAAATGTTCAGCAGAAAAGGAGCAGGGCCATCTTCTaGCACTTTCTAGACAATCAACCAACTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LNVQQKRSRAIF*HFLDNQPTSIY
Trigger: ATAAATGGAAGTTGGTTGATTGTCTAGAAAGTGCAAGAAGATGGCCCTGCTCCTTTTCTGCTGAACATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR GCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTGTTGTCTATGCATGGTaGTTAGCTCTCAGTGATCTA +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCVVYAW*LALSDL
Trigger: TAGATCACTGAGAGCTAAGCACCATGCATAGACAAC...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTACTGTTGTCTATGCATaGTGCTTAGCTCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCTVVYA*CLALSD
Trigger: ATCACTGAGAGCTAAGCACCATGCATAGACAACAGT...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR TCA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTCTTTTGTTGTATCTTTaGAAAGATGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCLLLYL*KDGHAG
Trigger: CCCAGCATGTCCATCTTTTCAAAGATACAACAAAAG...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGAGAAGCCAACTTACTaGCTTGGAAAAGATAAGAAT +
Preference number: 4 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVEKPTY*LGKDKN
Trigger: ATTCTTATCTTTTCCAAGCCAGTAAGTTGGCTTCTC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CCA 90 bp CCTTATCACTTCATCAAGAAAATATCCTGTCTAAACATTTCCAGACCTTGTTCTCTGGGTTTCAAAATGTaGTATTCTTGTAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PYHFIKKISCLNISRPCSLGFKM*YSCKGV
Trigger: CACACCCTTACAAGAATACCACATTTTGAAACCCAG...AGAACAAGGTCTGGAAATGTTTAGACAGGATATTTTCTTGATGAAGTGATAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS GCA 90 bp CGGCCGTCGGGGCTCGGGACGCGCAGGAACGCGGCGGAGGCGCGGTaGAGCAGGCGGCGGATCAAGCTGGGGTCGCGAGGCCGACTCCGC +
Preference number: 5 (lower is better)
Translates to: RPSGLGTRRNAAEAR*SRRRIKLGSRGRLR
Trigger: GCGGAGTCGGCCTCGCGACCCCAGCTTGATCCGCCGCCTGCTGCACCGCGCCTCCGCCGCGTTCCTGCGCGTCCCGAGCCCCGACGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS CCA 90 bp GCAGGAACGCGGCGGAGGCGCGGTGCAGCAGGCGGCGGATCAAGCTaGGGTCGCGAGGCCGACTCCGCCGCACTCCACCCGCAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: AGTRRRRGAAGGGSS*GREADSAALHPQRP
Trigger: GGGCCGCTGCGGGTGGAGTGCGGCGGAGTCGGCCTCGCGACCCCAGCTTGATCCGCCGCCTGCTGCACCGCGCCTCCGCCGCGTTCCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS GCA 90 bp TTCGGCAGCTATTTCGGGAGGGCCTCCCGCGTGTCCCGAGTCCGGTaGCGGGAGCCCAGGCGTCACGCAGCGCGGCGGGAATGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: FGSYFGRASRVSRVR*REPRRHAARRECAS
Trigger: GGAGGCGCATTCCCGCCGCGCTGCGTGACGCCTGGGCTCCCGGCACCGGACTCGGGACACGCGGGAGGCCCTCCCGAAATAGCTGCCGAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS GCA 90 bp CGAGTCCGGTGCCGGGAGCCCAGGCGTCACGCAGCGCGGCGGGAATaGGCCTCCGCACACTTAAATGCCGCCCGCGCCACCGCTCAGATT +
Preference number: 5 (lower is better)
Translates to: RVRCREPRRHAARRE*ASAHLNAARATAQI
Trigger: AATCTGAGCGGTGGCGCGGGCGGCATTTAAGTGTGCGGAGGCGCATTCCCGCCGCGCTGCGTGACGCCTGGGCTCCCGGCACCGGACTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS TCA 90 bp CACAGCGGAAGGGCCTTTCGCTTGCATGAGCTCTCCGGTGGCTGGTaGGTCGAGCCTGGTCAGCAAAGCGCTTGGGGCAATCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: HSGRAFRLHELSGGW*VEPGQQSAWGNQDR
Trigger: CCTGTCCTGATTGCCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCCGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS TCA 90 bp TCGCAGTTTAGGACCCAGCCGCAAAGCCGGGCTCATTCTGGGGAGTaGTTTTCTTCACGGAGGCTCGATACGCAGGCGCCGTCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SQFRTQPQSRAHSGE*FSSRRLDTQAPSAG
Trigger: GCCTGCAGACGGCGCCTGCGTATCGAGCCTCCGTGAAGAAAATCACTCCCCAGAATGAGCCCGGCTTTGCGGCTGGGTCCTAAACTGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485111.5
CDS GCA 90 bp GCATGGTCCTGGGAGGTGCTGCTGAGGTCCGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAGGGTAAGGGGTGCTCAGTAGCATGG +
Preference number: 5 (lower is better)
Translates to: AWSWEVLLRSACGVK*LGHWAQGKGCSVAW
Trigger: CCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGCAGCACCTCCCAGGACCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS TCA 90 bp GAAGTTTCAAGCCCAGTTATGAGGGGACCTGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCACCCCCACAGCCTCCATTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: EVSSPVMRGPGGLGG*PDGSLSPPQPPLWP
Trigger: AGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCATCAGGTCAGCCACCCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 90 bp CCACAGAGAGATAGCTGCTGTCTGCAGGTGTGCCTCATTTGCTGCTaGGGGTGTAGGAAGAGGAAGGGGCTGCAGGGATGTAAGGCACTC +
Preference number: 5 (lower is better)
Translates to: PQRDSCCLQVCLICC*GCRKRKGLQGCKAL
Trigger: GAGTGCCTTACATCCCTGCAGCCCCTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000485111.5
ENST00000491174.1
CDS CCA 90 bp GCCCAGTACAATTGCTCTCCTAGAGGTGACCAAAGACCTCTTGGGTaGCAAATGCGATCAGTGCTTTCCCCGCGGCCTGACCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: AQYNCSPRGDQRPLG*QMRSVLSPRPDRPL
Trigger: AAGGGGACGGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCACCTCTAGGAGAGCAATTGTACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS TCA 90 bp GGTCAGCAACATGTCTTGGCTGAGATTCTTGCCACAGTGGTGGCATaGGAACACCTGCTCGCCAACTGGAGGTGGGAGGGGATAGCTACC +
Preference number: 5 (lower is better)
Translates to: GQQHVLAEILATVVA*EHLLANWRWEGIAT
Trigger: GGTAGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 90 bp CATTGGTGGGTCAGCAACATGTCTTGGCTGAGATTCTTGCCACAGTaGTGGCATGAGAACACCTGCTCGCCAACTGGAGGTGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: HWWVSNMSWLRFLPQ*WHENTCSPTGGGRG
Trigger: TCCCCTCCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 90 bp GGGCACTGGGCACAGGGTAAGGGGTGCTCAGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCTTGGCTGAGATTCTTGCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: GHWAQGKGCSVAWLH*WVSNMSWLRFLPQW
Trigger: CCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGGAAGGGCCTTTCGCTaGCATGAGCTCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYGRAFR*HELSGG
Trigger: GCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGGAGAAAGGGCGCTCTaGTGCATGACCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYGERAL*CMTPLV
Trigger: CACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCCTCTCTGGGATGGCCTaGCACATCGCCTTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSLSGMA*HIAFRS
Trigger: GGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAG...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAGCGCCACCGCTCAGATaGCTGGTGACGAACGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAAPPLR*LVTNAP
Trigger: GGGAGCGTTCGTCACCAGCAATCTGAGCGGTGGCGC...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS GCA 90 bp GTTGAAGTCAATGCCACACTGAGGGCAGGAGAAAGGGCGCTCTTGTaGATGACCCCGCTGGTGGAGCAGGAGGCTGATTTTCAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: VEVNATLRAGERALL*MTPLVEQEADFQAE
Trigger: TTCAGCTTGAAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 90 bp ACAATTGCTCTCCTAGAGGTGACCAAAGACCTCTTGGGTGGCAAATaGGATCAGTGCTTTCCCCGCGGCCTGACCGTCCCCTTCTCATTC +
Preference number: 5 (lower is better)
Translates to: TIALLEVTKDLLGGK*DQCFPRGLTVPFSF
Trigger: GAATGAGAAGGGGACGGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCACCTCTAGGAGAGCAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS CCA 90 bp CACTGGGCACAGGGTAAGGGGTGCTCAGTAGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGGCTGAGATTCTTGCCACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HWAQGKGCSVAWLHW*VSNMSWLRFLPQWW
Trigger: CCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATACACGTCACTCTCCTaGGACTCCGGTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQAYTSLS*DSGGAP
Trigger: TGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTA...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 90 bp GGGTGCTCAGTAGCATGGCTACATTGGTGGGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAGTGGTGGCATGAGAACACCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GCSVAWLHWWVSNMS*LRFLPQWWHENTCS
Trigger: CGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCTACACGTCACTCTCCTaGGACTCCGGTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QTFSWILCPAVSIYKHEAYTSLS*DSGGAP
Trigger: TGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTA...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTACACGTCACTCTCCTaGGACTCCGGTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHYTSLS*DSGGAP
Trigger: TGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATGGAAGGGCCTTTCGCTaGCATGAGCTCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDGRAFR*HELSGG
Trigger: GCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCC...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGAAGGGCCTTTCGCTaGCATGAGCTCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQGRAFR*HELSGG
Trigger: GCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCC...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CTTCCGTCTCTCTGGGATGGCCTTGCACATCGCCTTTCGTTCCATCTGAGGGCTCCTCCACACTTTCTGTaGGACACCTTATCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LPSLWDGLAHRLSFHLRAPPHFL*DTLSFP
Trigger: TGGGAAGGATAAGGTGTCCAACAGAAAGTGTGGAGG...AGCCCTCAGATGGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAGACGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS CCA 90 bp AAGTGCTTAGGGCACTGGGCACAGGGTAAGGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGCAACATGTCTTGGCTGAGATTCTTG +
Preference number: 5 (lower is better)
Translates to: KCLGHWAQGKGCSVA*LHWWVSNMSWLRFL
Trigger: CAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACATACACGTCACTCTCCTaGGACTCCGGTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TFSWILCPAVSIYKHEATYTSLS*DSGGAP
Trigger: TGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTA...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCAGTAGCATGGCTACATaGGTGGGTCAGCAACATGTC +
Preference number: 5 (lower is better)
Translates to: GVGWGSQTFSWILCPAVSSSMAT*VGQQHV
Trigger: GACATGTTGCTGACCCACCAATGTAGCCATGCTACT...GCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGGAGAAAGGGCGCTCTaGTGCATGACCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TFSWILCPAVSIYKHEATGERAL*CMTPLV
Trigger: CACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAGGAGAAAGGGCGCTCTaGTGCATGACCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPGERAL*CMTPLV
Trigger: CACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCC...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCAGATCTTGGCTGGTTTaGAGAGAGGAGGCAGCAACA +
Preference number: 5 (lower is better)
Translates to: YCGCWMGLTDLLLDFVPCRSWLV*REEAAT
Trigger: TGTTGCTGCCTCCTCTCTCAAAACCAGCCAAGATCT...GCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACGGTCAGCAACATGTCTaGGCTGAGATTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYGQQHV*AEILAT
Trigger: TGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACC...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCCCCATACCACTGGTaGGTCTCTAGACCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQASPYHW*VSRPSV
Trigger: CACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGA...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTTTCTCTCAGGAGCACTaGATAGGCCAAGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCFSQEH*IGQEFL
Trigger: GAGAAACTCTTGGCCTATCAAGTGCTCCTGAGAGAA...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS CCA 90 bp ATCAGCATAAGTGCTTTTGTACACGTCACTCTCCTTGGACTCCGGTaGGGCCCCAACCTGAGGCTCTTCTTCTTGTTTAATCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: ISISAFVHVTLLGLR*GPNLRLFFLFNPRQ
Trigger: CTGTCTTGGATTAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTACAAAAGCACTTATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCACTGAAAAAGCATCCTTaGCTGCTGCTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQALKKHP*LLLVEK
Trigger: CTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAG...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTCTTGGCTGAGATTCTaGCCACAGTGGTGGCATGAG +
Preference number: 5 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHSWLRF*PQWWHE
Trigger: CTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCAAGTAGCATGGCTACATaGGTGGGTCAGCAACATGTC +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQASSMAT*VGQQHV
Trigger: GACATGTTGCTGACCCACCAATGTAGCCATGCTACT...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAGTAGCATGGCTACATaGGTGGGTCAGCAACATGTC +
Preference number: 5 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKSSMAT*VGQQHV
Trigger: GACATGTTGCTGACCCACCAATGTAGCCATGCTACT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATCTAGACCTTCAGTGTaGACACCCAGGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GLTDLLLDFVPCCEHIQASRPSV*TPRPEV
Trigger: AACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGA...TGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATTCCCCATACCACTGGTaGGTCTCTAGACCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDSPYHW*VSRPSV
Trigger: CACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGA...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHILTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGAGATCTTGGCTGGTTTaGAGAGAGGAGGCAGCAACA +
Preference number: 5 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKRSWLV*REEAAT
Trigger: TGTTGCTGCCTCCTCTCTCAAAACCAGCCAAGATCT...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGTTCCTAGTGGGTaGCCAATGAAGCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: WMGLTDLLLDFVPCCEHIQVPSG*PMKPEP
Trigger: AGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTG...TATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGGCAAGGCCTTCAGCTTaGATGACAAGCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: WGSQTFSWILCPAVSIYKARPSA*MTSSSS
Trigger: TGATGAAGAGCTTGTCATCAAAGCTGAAGGCCTTGC...CTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGTCTTGGCTGAGATTCTaGCCACAGTGGTGGCATGAG +
Preference number: 5 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWSWLRF*PQWWHE
Trigger: CTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGA...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGAGGAAGGGCCTTTCGCTaGCATGAGCTCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRGRAFR*HELSGG
Trigger: GCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCC...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATTCTAGACCTTCAGTGTaGACACCCAGGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHSRPSV*TPRPEV
Trigger: AACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGA...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QTFSWILCPAVSIYKHEALTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...GGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTCCTAGGCAGGCAGTCTaGAGTTACCATGTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ESHIQVPSGLPMKPEPWLPRQAV*SYHVSG
Trigger: CCCTGAAACATGGTAACTCAAGACTGCCTGCCTAGG...AAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATCCTAGGCAGGCAGTCTaGAGTTACCATGTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHPRQAV*SYHVSG
Trigger: CCCTGAAACATGGTAACTCAAGACTGCCTGCCTAGG...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTTTTTTAACCAGGACCTaGGCAAAGATTTCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCFLTRT*AKISGS
Trigger: ACTGCCAGAAATCTTTGCCAAGGTCCTGGTTAAAAA...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGGCAGACACACATTTCTaGTGTCTCCCATGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLADTHF*CLPWSL
Trigger: CAGGGACCATGGGAGACACAAGAAATGTGTGTCTGC...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGGCAGACACACATTTCTaGTGTCTCCCATGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSWILCPAVSIYKHEATEADTHF*CLPWSL
Trigger: CAGGGACCATGGGAGACACAAGAAATGTGTGTCTGC...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGATTGCCCATCATGTCTaGTTCTGTATTATTGGGCTT +
Preference number: 5 (lower is better)
Translates to: LWVLDGAHRPSLGFCALLIAHHV*FCIIGL
Trigger: AAGCCCAATAATACAGAACAAGACATGATGGGCAAT...CAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGGCCAGAACCTTGGCTTaGGGATTCCCAGCACCCCTA +
Preference number: 5 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWARTLA*GFPAPL
Trigger: TAGGGGTGCTGGGAATCCCAAAGCCAAGGTTCTGGC...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACTACCCTGGCAAATGCTaGAAATCCACTCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYYPGKC*KSTQKR
Trigger: CCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGTA...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTCTGAGGCTCTTCTTCTaGTTTAATCCAAGACAGAAT +
Preference number: 5 (lower is better)
Translates to: CGCWMGLTDLLLDFVPCCLRLFF*FNPRQN
Trigger: ATTCTGTCTTGGATTAAACAAGAAGAAGAGCCTCAG...ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCTGAAAAAGCATCCTTaGCTGCTGCTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLLKKHP*LLLVEK
Trigger: CTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGCTGAAAAAGCATCCTTaGCTGCTGCTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FSWILCPAVSIYKHEATELKKHP*LLLVEK
Trigger: CTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAG...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACACTGAAAAAGCATCCTTaGCTGCTGCTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TFSWILCPAVSIYKHEATLKKHP*LLLVEK
Trigger: CTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAG...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTCTTGGCTGAGATTCTaGCCACAGTGGTGGCATGAG +
Preference number: 5 (lower is better)
Translates to: SWILCPAVSIYKHEATEISWLRF*PQWWHE
Trigger: CTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGA...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGAGTAGCATGGCTACATaGGTGGGTCAGCAACATGTC +
Preference number: 5 (lower is better)
Translates to: FSWILCPAVSIYKHEATESSMAT*VGQQHV
Trigger: GACATGTTGCTGACCCACCAATGTAGCCATGCTACT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACATCTAGACCTTCAGTGTaGACACCCAGGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TFSWILCPAVSIYKHEATSRPSV*TPRPEV
Trigger: AACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGA...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTTCCCCATACCACTGGTaGGTCTCTAGACCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SWILCPAVSIYKHEATEISPYHW*VSRPSV
Trigger: CACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGA...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAATCCCCATACCACTGGTaGGTCTCTAGACCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SQTFSWILCPAVSIYKHESPYHW*VSRPSV
Trigger: CACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGA...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: GSQTFSWILCPAVSIYKHTFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...ATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IITVGVGWGSQTFSWILCLTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp TGTGGACTGTTATTACCGAGTAAGTCACAGGGTCTGGTCCTGGTTGAGATAGACGATGGGCTTCCAGTTTaGGAGGCTCTTCTCATGTAT +
Preference number: 5 (lower is better)
Translates to: CGLLLPSKSQGLVLVEIDDGLPV*EALLMY
Trigger: ATACATGAGAAGAGCCTCCAAAACTGGAAGCCCATC...GTCTATCTCAACCAGGACCAGACCCTGTGACTTACTCGGTAATAACAGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CAA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGGACAGAGACAGAACTTaGGCAGGAAAAGGAATGTAT +
Preference number: 5 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALDRDRT*AGKGMY
Trigger: ATACATTCCTTTTCCTGCCAAAGTTCTGTCTCTGTC...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCAATATGCTAGGGTATaGCCCATCATGTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALQYARV*PIMSCS
Trigger: AGAACAAGACATGATGGGCAATACCCTAGCATATTG...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp ACCTGGATCCACTCTAAGGGAATGGTGCTTATGTGTGATAGTGACAGCTTCTTGCCTCCACACTTTCTGTaGGACACCTTATCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: TWIHSKGMVLMCDSDSFLPPHFL*DTLSFP
Trigger: TGGGAAGGATAAGGTGTCCAACAGAAAGTGTGGAGG...CAAGAAGCTGTCACTATCACACATAAGCACCATTCCCTTAGAGTGGATCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATTTCCCCTTTCCTATCTaGTCTGGTCATGACAAGCAG +
Preference number: 5 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDFPFPI*SGHDKQ
Trigger: CTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAA...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACACAGAATATCTGATGTaGAAATACCAGGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GWGSQTFSWILCPAVSIYTEYLM*KYQALH
Trigger: GTGAAGAGCCTGGTATTTCAACATCAGATATTCTGT...GTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ATAATTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCGCAAGGCCTTCAGCTTaGATGACAAGCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: IITVGVGWGSQTFSWILCARPSA*MTSSSS
Trigger: TGATGAAGAGCTTGTCATCAAAGCTGAAGGCCTTGC...GCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp ATCCACTCAGAAAAGGGAACTCAGCACCTAGACAATACTTTGGCTCTTCTCCCTACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: IHSEKGTQHLDNTLALLPTFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...AGGGAGAAGAGCCAAAGTATTGTCTAGGTGCTGAGTTCCCTTTTCTGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: FSWILCPAVSIYKHEATETFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...CTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTCTCACAGACCTTCTCTaGGATTTTGTGCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SWILCPAVSIYKHEATEILTDLL*DFVPCC
Trigger: ACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAG...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TGTGGACTGTTATTACCGAGTAAGTCACAGGGTCTGGTCCTGGTTGAGATAGACCTGTCTTATTTAGCTTaGCCTGGACAGAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: CGLLLPSKSQGLVLVEIDLSYLA*PGQKPK
Trigger: CTTTGGCTTCTGTCCAGGCAAAGCTAAATAAGACAG...GTCTATCTCAACCAGGACCAGACCCTGTGACTTACTCGGTAATAACAGTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CAA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGCCAGAACCTTGGCTTaGGGATTCCCAGCACCCCTA +
Preference number: 5 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVARTLA*GFPAPL
Trigger: TAGGGGTGCTGGGAATCCCAAAGCCAAGGTTCTGGC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp ATCAAGGTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCACAAGTTCCTAGTGGGTaGCCAATGAAGCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: IKVQTRAESHIQVPSGLPQVPSG*PMKPEP
Trigger: AGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTG...TGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCACCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TCATGGAGCAGATGTTTTCTAAGTGTGATTATCCTACAGAGCAACATGTTCAGACTCTCTGGGATGGCCTaGCACATCGCCTTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: SWSRCFLSVIILQSNMFRLSGMA*HIAFRS
Trigger: GGAACGAAAGGCGATGTGCAAGGCCATCCCAGAGAG...TCTGAACATGTTGCTCTGTAGGATAATCACACTTAGAAAACATCTGCTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATTTCTCTCAGGAGCACTaGATAGGCCAAGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHFSQEH*IGQEFL
Trigger: GAGAAACTCTTGGCCTATCAAGTGCTCCTGAGAGAA...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCAAGGCCTTCAGCTTaGATGACAAGCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: SQTFSWILCPAVSIYKHEARPSA*MTSSSS
Trigger: TGATGAAGAGCTTGTCATCAAAGCTGAAGGCCTTGC...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTGGTCAGCAACATGTCTaGGCTGAGATTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLGQQHV*AEILAT
Trigger: TGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACC...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAACCTTCTCTTGGATTTaGTGCCCTGCTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: SQTFSWILCPAVSIYKHETFSWI*CPAVSI
Trigger: TATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT...TTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp TTACTGTGGGTGTTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTAACTGATAGGGGATaGATGAAAGAAAAGAGTAAC +
Preference number: 5 (lower is better)
Translates to: LLWVLDGAHRPSLGFCALLTDRG*MKEKSN
Trigger: GTTACTCTTTTCTTTCATCAATCCCCTATCAGTTAG...CAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAACACCCACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS TCA 90 bp TTGGATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTaGGCATATACAAGCATGAAGCCACAGAGATTTGGATTTACAAAA +
Preference number: 5 (lower is better)
Translates to: LDGAHRPSLGFCALL*AYTSMKPQRFGFTK
Trigger: TTTTGTAAATCCAAATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp ATGGGGCTCACAGACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAACAGAATATCTGATGTaGAAATACCAGGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: MGLTDLLLDFVPCCEHIQTEYLM*KYQALH
Trigger: GTGAAGAGCCTGGTATTTCAACATCAGATATTCTGT...TTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGTCTGTGAGCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CACATTCAAGTTCCTAGTGGGTTGCCAATGAAGCCAGAACCTTGGCTTTGGGATCACCTTCTTCTAGTGTaGTTATGCATAACTAGAGAG +
Preference number: 5 (lower is better)
Translates to: HIQVPSGLPMKPEPWLWDHLLLV*LCITRE
Trigger: CTCTCTAGTTATGCATAACAACACTAGAAGAAGGTG...ATCCCAAAGCCAAGGTTCTGGCTTCATTGGCAACCCACTAGGAACTTGAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp AGCAGACTCAGATGCTCCCAGGTGATTAAATCACCCCAAGAAAAGAACATGTGGCAATATGCTAGGGTATaGCCCATCATGTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SRLRCSQVIKSPQEKNMWQYARV*PIMSCS
Trigger: AGAACAAGACATGATGGGCAATACCCTAGCATATTG...CCACATGTTCTTTTCTTGGGGTGATTTAATCACCTGGGAGCATCTGAGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TGTGGACTGTTATTACCGAGTAAGTCACAGGGTCTGGTCCTGGTTGAGATAGACAATTGTGTTCACTTTTaGCCAAAGTTTAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CGLLLPSKSQGLVLVEIDNCVHF*PKFRSL
Trigger: CAGGGACCTAAACTTTGGCAAAAAGTGAACACAATT...GTCTATCTCAACCAGGACCAGACCCTGTGACTTACTCGGTAATAACAGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CAA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGTGACCAAAGACCTCTaGGGTGGCAAATGCGATCAG +
Preference number: 5 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVVTKDL*GGKCDQ
Trigger: CTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCAC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS CCA 90 bp TTTGCCATTCTTCTAATTTTTCCCACTCTGGAGTGGAAAAGTAGATaGAGACATCATCAAATGCCACAGGCACCTTTGGGATATCTCCCT +
Preference number: 5 (lower is better)
Translates to: FAILLIFPTLEWKSR*RHHQMPQAPLGYLP
Trigger: AGGGAGATATCCCAAAGGTGCCTGTGGCATTTGATGATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAAAATTAGAAGAATGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000485111.5
ENST00000491174.1
CDS-3UTR CAA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGGTCAGCAACATGTCTaGGCTGAGATTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGGQQHV*AEILAT
Trigger: TGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACC...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp GAGAGAGGAGGCAGCAACATAAACAGTGGCTTAAGCACTTTCTCCAACAACCATGCTTTTGTTGTATCTTaGAAAAGATGGACATGCTGG +
Preference number: 5 (lower is better)
Translates to: ERGGSNINSGLSTFSNNHAFVVS*KRWTCW
Trigger: CCAGCATGTCCATCTTTTCAAAGATACAACAAAAGC...ATGGTTGTTGGAGAAAGTGCTTAAGCCACTGTTTATGTTGCTGCCTCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp ACCTTCTCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGCTTTTGTTGTATCTTaGAAAAGATGGACATGCTGG +
Preference number: 5 (lower is better)
Translates to: TFSWILCPAVSIYKHEATAFVVS*KRWTCW
Trigger: CCAGCATGTCCATCTTTTCAAAGATACAACAAAAGC...TGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GTGCAAACTAGAGCTGAATCTCACATTCAAGTTCCTAGTGGGTTGCCAATGAAGTTTTTAACCAGGACCTaGGCAAAGATTTCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: VQTRAESHIQVPSGLPMKFLTRT*AKISGS
Trigger: ACTGCCAGAAATCTTTGCCAAGGTCCTGGTTAAAAA...CTTCATTGGCAACCCACTAGGAACTTGAATGTGAGATTCAGCTCTAGTTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GGTTTCCCCTTTCCTATCTTGTCTGGTCATGACAAGCAGTTCTCATGTATTTCTCACCTAGACAATACTTaGGCTCTTCTCCCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: GFPFPILSGHDKQFSCISHLDNT*ALLPFH
Trigger: GTGAAAAGGGAGAAGAGCCAAAGTATTGTCTAGGTG...AGAAATACATGAGAACTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTTTAAGCAAACACTCTTaGGAACTGGCCTGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLLSKHS*ELACSS
Trigger: AGAACTGCAGGCCAGTTCCAAAGAGTGTTTGCTTAA...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TCTTGGATTTTGTGCCCTGCTGTGAGCATATACAAGCATGAAGCCACAGAGATTACAGAATATCTGATGTaGAAATACCAGGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SWILCPAVSIYKHEATEITEYLM*KYQALH
Trigger: GTGAAGAGCCTGGTATTTCAACATCAGATATTCTGT...AATCTCTGTGGCTTCATGCTTGTATATGCTCACAGCAGGGCACAAAATCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS-3UTR CAA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGATGGGCTTCCAGTTTaGGAGGCTCTTCTCATGTAT +
Preference number: 5 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVDGLPV*EALLMY
Trigger: ATACATGAGAAGAGCCTCCAAAACTGGAAGCCCATC...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CACTTTCTGTTGGACACCTTATCCTTCCCACTGATCCATTTTACTTACCCACTTGACAGAGACAGAACTTaGGCAGGAAAAGGAATGTAT +
Preference number: 5 (lower is better)
Translates to: HFLLDTLSFPLIHFTYPLDRDRT*AGKGMY
Trigger: ATACATTCCTTTTCCTGCCAAAGTTCTGTCTCTGTC...AAGTGGGTAAGTAAAATGGATCAGTGGGAAGGATAAGGTGTCCAACAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTTACCCTGGCAAATGCTaGAAATCCACTCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSYPGKC*KSTQKR
Trigger: CCTTTTCTGAGTGGATTTCAAGCATTTGCCAGGGTA...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTTTCCCCTTTCCTATCTaGTCTGGTCATGACAAGCAG +
Preference number: 5 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGFPFPI*SGHDKQ
Trigger: CTGCTTGTCATGACCAGACAAGATAGGAAAGGGGAA...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGACAGAATATCTGATGTaGAAATACCAGGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWTEYLM*KYQALH
Trigger: GTGAAGAGCCTGGTATTTCAACATCAGATATTCTGT...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000491174.1
CDS-3UTR CAA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTCTGTCTTATTTAGCTTaGCCTGGACAGAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVLSYLA*PGQKPK
Trigger: CTTTGGCTTCTGTCCAGGCAAAGCTAAATAAGACAG...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp AACACTGTTATCATCTCACTACTGAGGACCAAGAGTTCACTGGCACTTTCTGAAATTGCCCATCATGTCTaGTTCTGTATTATTGGGCTT +
Preference number: 5 (lower is better)
Translates to: NTVIISLLRTKSSLALSEIAHHV*FCIIGL
Trigger: AAGCCCAATAATACAGAACAAGACATGATGGGCAAT...TTCAGAAAGTGCCAGTGAACTCTTGGTCCTCAGTAGTGAGATGATAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp CAAGTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTCACCTAGACAATACTTaGGCTCTTCTCCCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: QVYRTPNSLMCQIIITVGHLDNT*ALLPFH
Trigger: GTGAAAAGGGAGAAGAGCCAAAGTATTGTCTAGGTG...ACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp GTGTATAGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTAGCAGGGCCATCTTCTaGCACTTTCTAGACAATCAA +
Preference number: 5 (lower is better)
Translates to: VYRTPNSLMCQIIITVGVSRAIF*HFLDNQ
Trigger: TTGATTGTCTAGAAAGTGCAAGAAGATGGCCCTGCT...AACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCTATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS-3UTR CAA 90 bp CCTGCTTTCCAACCTCTCCGCAATATTCTTGTAACTTCTGCTTTTGTTGTATCTCACCTTCTTCTAGTGTaGTTATGCATAACTAGAGAG +
Preference number: 5 (lower is better)
Translates to: PAFQPLRNILVTSAFVVSHLLLV*LCITRE
Trigger: CTCTCTAGTTATGCATAACAACACTAGAAGAAGGTG...AGATACAACAAAAGCAGAAGTTACAAGAATATTGCGGAGAGGTTGGAAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp AGGACCCCAAATTCATTGATGTGCCAGATAATAATTACTGTGGGTGTTGGATGGCTAACTGATAGGGGATaGATGAAAGAAAAGAGTAAC +
Preference number: 5 (lower is better)
Translates to: RTPNSLMCQIIITVGVGWLTDRG*MKEKSN
Trigger: GTTACTCTTTTCTTTCATCAATCCCCTATCAGTTAG...CCATCCAACACCCACAGTAATTATTATCTGGCACATCAATGAATTTGGGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTTTAAGCAAACACTCTTaGGAACTGGCCTGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCLSKHS*ELACSS
Trigger: AGAACTGCAGGCCAGTTCCAAAGAGTGTTTGCTTAA...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS-3UTR CAA 90 bp TATTCTTGTAAGGGTGTGAAATTCCAAAACACAAGCATGTCTCTAGTCAAGTGTAATTGTGTTCACTTTTaGCCAAAGTTTAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: YSCKGVKFQNTSMSLVKCNCVHF*PKFRSL
Trigger: CAGGGACCTAAACTTTGGCAAAAAGTGAACACAATT...ACACTTGACTAGAGACATGCTTGTGTTTTGGAATTTCACACCCTTACAAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426851.6
ENST00000475153.6
CDS GCA 72 bp GGGCTCGGGACGCGCAGGAACGCGGCGGAGGCGCGGTaGAGCAGGCGGCGGATCAAGCTGGGGTCGCGAGGC +
Preference number: 6 (lower is better)
Translates to: GLGTRRNAAEAR*SRRRIKLGSRG
Trigger: GCCTCGCGACCCCAGCTTGATCCGCCGCCTGCTGCACCGCGCCTCCGCCGCGTTCCTGCGCGTCCCGAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS CCA 72 bp CGGCGGAGGCGCGGTGCAGCAGGCGGCGGATCAAGCTaGGGTCGCGAGGCCGACTCCGCCGCACTCCACCCG +
Preference number: 6 (lower is better)
Translates to: RRRRGAAGGGSS*GREADSAALHP
Trigger: CGGGTGGAGTGCGGCGGAGTCGGCCTCGCGACCCCAGCTTGATCCGCCGCCTGCTGCACCGCGCCTCCGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475153.6
CDS GCA 72 bp TGCCGGGAGCCCAGGCGTCACGCAGCGCGGCGGGAATaGGCCTCCGCACACTTAAATGCCGCCCGCGCCACC +
Preference number: 6 (lower is better)
Translates to: CREPRRHAARRE*ASAHLNAARAT
Trigger: GGTGGCGCGGGCGGCATTTAAGTGTGCGGAGGCGCATTCCCGCCGCGCTGCGTGACGCCTGGGCTCCCGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS GCA 72 bp TATTTCGGGAGGGCCTCCCGCGTGTCCCGAGTCCGGTaGCGGGAGCCCAGGCGTCACGCAGCGCGGCGGGAA +
Preference number: 6 (lower is better)
Translates to: YFGRASRVSRVR*REPRRHAARRE
Trigger: TTCCCGCCGCGCTGCGTGACGCCTGGGCTCCCGGCACCGGACTCGGGACACGCGGGAGGCCCTCCCGAAATA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483892.5
CDS TCA 72 bp AGGACCCAGCCGCAAAGCCGGGCTCATTCTGGGGAGTaGTTTTCTTCACGGAGGCTCGATACGCAGGCGCCG +
Preference number: 6 (lower is better)
Translates to: RTQPQSRAHSGE*FSSRRLDTQAP
Trigger: CGGCGCCTGCGTATCGAGCCTCCGTGAAGAAAATCACTCCCCAGAATGAGCCCGGCTTTGCGGCTGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485111.5
CDS CCA 72 bp CCTGTCCGACCTTCCAGGTGTAGGAGTCGCCGGCTGTaGATCTCCACCTTCCTCTCTATAGCCTGCACGGCG +
Preference number: 6 (lower is better)
Translates to: PVRPSRCRSRRL*ISTFLSIACTA
Trigger: CGCCGTGCAGGCTATAGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCTACACCTGGAAGGTCGGACAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000485111.5
ENST00000491174.1
CDS TCA 72 bp AGGGCCTTTCGCTTGCATGAGCTCTCCGGTGGCTGGTaGGTCGAGCCTGGTCAGCAAAGCGCTTGGGGCAAT +
Preference number: 6 (lower is better)
Translates to: RAFRLHELSGGW*VEPGQQSAWGN
Trigger: ATTGCCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS TCA 72 bp AGCCCAGTTATGAGGGGACCTGGTGGGTTGGGTGGCTaGCCTGATGGGTCACTATCACCCCCACAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SPVMRGPGGLGG*PDGSLSPPQPP
Trigger: TGGAGGCTGTGGGGGTGATAGTGACCCATCAGGTCAGCCACCCAACCCACCAGGTCCCCTCATAACTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 72 bp TGGGAGGTGCTGCTGAGGTCCGCCTGTGGAGTAAAGTaGTTAGGGCACTGGGCACAGGGTAAGGGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: WEVLLRSACGVK*LGHWAQGKGCS
Trigger: TGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGCAGCACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 72 bp CTCCTAGAGGTGACCAAAGACCTCTTGGGTGGCAAATaGGATCAGTGCTTTCCCCGCGGCCTGACCGTCCCC +
Preference number: 6 (lower is better)
Translates to: LLEVTKDLLGGK*DQCFPRGLTVP
Trigger: GGGGACGGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCACCTCTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS CAA 72 bp GTCAATGCCACACTGAGGGCAGGAGAAAGGGCGCTCTaGTGCATGACCCCGCTGGTGGAGCAGGAGGCTGAT +
Preference number: 6 (lower is better)
Translates to: VNATLRAGERAL*CMTPLVEQEAD
Trigger: ATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp GCCGTTGAAGTCAATGCCACACTGAGGGCAGGAGAAAGGGCGCTCTaGTGCATGACCCCGCTGGTGGAGCAGGAGGCTGATTTTCAAGCT +
Preference number: 6 (lower is better)
Translates to: AVEVNATLRAGERAL*CMTPLVEQEADFQA
Trigger: AGCTTGAAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTTCAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp AGCGTGCCCAGTACAATTGCTCTCCTAGAGGTGACCAAAGACCTCTaGGGTGGCAAATGCGATCAGTGCTTTCCCCGCGGCCTGACCGTC +
Preference number: 6 (lower is better)
Translates to: SVPSTIALLEVTKDL*GGKCDQCFPRGLTV
Trigger: GACGGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCACCTCTAGGAGAGCAATTGTACTGGGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS TCA 72 bp AGTTATGAGGGGACCTGGTGGGTTGGGTGGCTGACCTaGTGGGTCACTATCACCCCCACAGCCTCCATTGTG +
Preference number: 6 (lower is better)
Translates to: SYEGTWWVGWLT*WVTITPTASIV
Trigger: CACAATGGAGGCTGTGGGGGTGATAGTGACCCATCAGGTCAGCCACCCAACCCACCAGGTCCCCTCATAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 72 bp AATGCCACACTGAGGGCAGGAGAAAGGGCGCTCTTGTaGATGACCCCGCTGGTGGAGCAGGAGGCTGATTTT +
Preference number: 6 (lower is better)
Translates to: NATLRAGERALL*MTPLVEQEADF
Trigger: AAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCCTGCCCTCAGTGTGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 72 bp GTGACCAAAGACCTCTTGGGTGGCAAATGCGATCAGTaGTTTCCCCGCGGCCTGACCGTCCCCTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: VTKDLLGGKCDQ*FPRGLTVPFSF
Trigger: GAATGAGAAGGGGACGGTCAGGCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS CCA 72 bp GGGCACTGGGCACAGGGTAAGGGGTGCTCAGTAGCATaGCTACATTGGTGGGTCAGCAACATGTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: GHWAQGKGCSVA*LHWWVSNMSWL
Trigger: CAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS TCA 72 bp TGGGTCACTATCACCCCCACAGCCTCCATTGTGGCCTaGACGGAGGTGGTCCTTGAGTGTCTGTTTGTAGCG +
Preference number: 6 (lower is better)
Translates to: WVTITPTASIVA*TEVVLECLFVA
Trigger: CGCTACAAACAGACACTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp CCTGATGGGTCACTATCACCCCCACAGCCTCCATTGTaGCCTGAACGGAGGTGGTCCTTGAGTGTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: PDGSLSPPQPPL*PERRWSLSVCL
Trigger: CAAACAGACACTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS GCA 72 bp GTAAAGTGCTTAGGGCACTGGGCACAGGGTAAGGGGTaGTCAGTAGCATGGCTACATTGGTGGGTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: VKCLGHWAQGKG*SVAWLHWWVSN
Trigger: GTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp ATCCTTTGCTGCTGCTGGTGGAGAAGAGAAAGGGACTaGAACCTCAGGGCACAACGAGGATCTAGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: ILCCCWWRRERD*NLRAQRGSSKA
Trigger: GGCCTTGCTAGATCCTCGTTGTGCCCTGAGGTTCCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp CACTTGTCCCTCAGAGGCTTCAGGCAGGTCAGTGGCTaGACGTCCAAAAGGTGTCATGGATGTAGACTGCTG +
Preference number: 6 (lower is better)
Translates to: HLSLRGFRQVSG*TSKRCHGCRLL
Trigger: CAGCAGTCTACATCCATGACACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAGCCTCTGAGGGACAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp AACTGGAGGTGGGAGGGGATAGCTACCCAACTGAGTAAAAGTCACTaGTCCCTCAGAGGCTTCAGGCAGGTCAGTGGCTGGACGTCCAAA +
Preference number: 6 (lower is better)
Translates to: NWRWEGIATQLSKSH*SLRGFRQVSGWTSK
Trigger: TTTGGACGTCCAGCCACTGACCTGCCTGAAGCCTCTGAGGGACAAGTGACTTTTACTCAGTTGGGTAGCTATCCCCTCCCACCTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp GCATGGCTACATTGGTGGGTCAGCAACATGTCTTGGCTGAGATTCTaGCCACAGTGGTGGCATGAGAACACCTGCTCGCCAACTGGAGGT +
Preference number: 6 (lower is better)
Translates to: AWLHWWVSNMSWLRF*PQWWHENTCSPTGG
Trigger: ACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp CCACTCCCTTCCCCATACCACTGGTTGGTCTCTAGACCTTCAGTGTaGACACCCAGGCCAGAAGTTTCAAGCCCAGTTATGAGGGGACCT +
Preference number: 6 (lower is better)
Translates to: PLPSPYHWLVSRPSV*TPRPEVSSPVMRGP
Trigger: AGGTCCCCTCATAACTGGGCTTGAAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp GTCAGCAACATGTCTTGGCTGAGATTCTTGCCACAGTaGTGGCATGAGAACACCTGCTCGCCAACTGGAGGT +
Preference number: 6 (lower is better)
Translates to: VSNMSWLRFLPQ*WHENTCSPTGG
Trigger: ACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 72 bp CATTGGTGGGTCAGCAACATGTCTTGGCTGAGATTCTaGCCACAGTGGTGGCATGAGAACACCTGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: HWWVSNMSWLRF*PQWWHENTCSP
Trigger: TGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 72 bp AGTACAATTGCTCTCCTAGAGGTGACCAAAGACCTCTaGGGTGGCAAATGCGATCAGTGCTTTCCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: STIALLEVTKDL*GGKCDQCFPRG
Trigger: GCCGCGGGGAAAGCACTGATCGCATTTGCCACCCAAGAGGTCTTTGGTCACCTCTAGGAGAGCAATTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491174.1
CDS CCA 72 bp CAGGGTAAGGGGTGCTCAGTAGCATGGCTACATTGGTaGGTCAGCAACATGTCTTGGCTGAGATTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: QGKGCSVAWLHW*VSNMSWLRFLP
Trigger: TGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp GCACAGGGTAAGGGGTGCTCAGTAGCATGGCTACATTaGTGGGTCAGCAACATGTCTTGGCTGAGATTCTTG +
Preference number: 6 (lower is better)
Translates to: AQGKGCSVAWLH*WVSNMSWLRFL
Trigger: CAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS TCA 72 bp CATGGCTACATTGGTGGGTCAGCAACATGTCTTGGCTaGGATTCTTGCCACAGTGGTGGCATGAGAACACCT +
Preference number: 6 (lower is better)
Translates to: HGYIGGSATCLG*DSCHSGGMRTP
Trigger: AGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp AGTGCTTTTGTACACGTCACTCTCCTTGGACTCCGGTaGGGCCCCAACCTGAGGCTCTTCTTCTTGTTTAAT +
Preference number: 6 (lower is better)
Translates to: SAFVHVTLLGLR*GPNLRLFFLFN
Trigger: ATTAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTACAAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CCA 72 bp GTAGCATGGCTACATTGGTGGGTCAGCAACATGTCTTaGCTGAGATTCTTGCCACAGTGGTGGCATGAGAAC +
Preference number: 6 (lower is better)
Translates to: VAWLHWWVSNMS*LRFLPQWWHEN
Trigger: GTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 72 bp TCCCCATACCACTGGTTGGTCTCTAGACCTTCAGTGTaGACACCCAGGCCAGAAGTTTCAAGCCCAGTTATG +
Preference number: 6 (lower is better)
Translates to: SPYHWLVSRPSV*TPRPEVSSPVM
Trigger: CATAACTGGGCTTGAAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1
CDS CAA 90 bp GTGGCTGGACGTCCAAAAGGTGTCATGGATGTAGACTGCTGGCTTTaGAAAGCCACATCTGAAAAAGCATCCTTTGCTGCTGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: VAGRPKGVMDVDCWL*KATSEKASFAAAGG
Trigger: TCCACCAGCAGCAGCAAAGGATGCTTTTTCAGATGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGACACCTTTTGGACGTCCAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426851.6
ENST00000475153.6
ENST00000483892.5
ENST00000491174.1