RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF397 (Homo sapiens)

Ensembl gene IDs: ENSG00000186812

Ensembl transcript IDs: ENST00000261333.10, ENST00000330501.12, ENST00000355632.8, ENST00000585800.1, ENST00000588119.1, ENST00000589420.1, ENST00000589630.1, ENST00000591206.5, ENST00000591505.1, ENST00000592264.1, ENST00000601719.1

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCACCTTaGCTAACTCCTCCTCATCCTTCAGGCCATTTCCCCCATTTCCTT +
Preference number: 1 (lower is better)
Translates to: GYCSLLGYHFPRVPP*LTPPHPSGHFPHFL
Trigger: AAGGAAATGGGGGAAATGGCCTGAAGGATGAGGAGGAGTTAGCCAAGGTGGTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 90 bp TCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCAGACTTCTCTaGCAGACAAGACCTCACTACAACAGGAACTCAAGGAATGCTCCA +
Preference number: 1 (lower is better)
Translates to: SPLALLKSLARPRLL*QTRPHYNRNSRNAP
Trigger: TGGAGCATTCCTTGAGTTCCTGTTGTAGTGAGGTCTTGTCTGTCAGAGAAGTCTGGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 90 bp ATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTaGGGTCACATAAACCAAGACAAAGCTCTTGACTACCCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: IAYRLGKETTYLPFP*GHINQDKALDYPVA
Trigger: GGCCACAGGGTAGTCAAGAGCTTTGTCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 90 bp CGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTG +
Preference number: 1 (lower is better)
Translates to: RSPFMRGPMAMNGLD*VPVKSPYASLFSVL
Trigger: CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACCACGCATAAATGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR CCA 90 bp ACCTCACTACAACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTaGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAG +
Preference number: 1 (lower is better)
Translates to: TSLQQELKECSTLCF*PLATVLYWGTTSLE
Trigger: CTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTGTAGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 90 bp ACTAAGCCTCTCACTCCCTCTGATCCCATCTGTGTTCTGTCTGTTTaGATATCTTGCCACTTTTCTCTGGACATGCTTCAGTTTCTCCAC +
Preference number: 1 (lower is better)
Translates to: TKPLTPSDPICVLSV*ISCHFSLDMLQFLH
Trigger: GTGGAGAAACTGAAGCATGTCCAGAGAAAAGTGGCAAGATATCCAAACAGACAGAACACAGATGGGATCAGAGGGAGTGAGAGGCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR TCA 90 bp ACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTG +
Preference number: 1 (lower is better)
Translates to: TTLSYKFLVGASLAS*YALPEVAPEMEIWV
Trigger: CACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR TCA 90 bp GTCCACACCAGCCCCATAACCTGGCACACTAACAATCAGATGCAGTaGCAGAGCCTGGGTTGCTATATTCATGACACTTTCATACAAAAT +
Preference number: 1 (lower is better)
Translates to: VHTSPITWHTNNQMQ*QSLGCYIHDTFIQN
Trigger: ATTTTGTATGAAAGTGTCATGAATATAGCAACCCAGGCTCTGTCACTGCATCTGATTGTTAGTGTGCCAGGTTATGGGGCTGGTGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR GCA 90 bp ACTTCTCTGACAGACAAGACCTCACTACAACAGGAACTCAAGGAATaGTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGG +
Preference number: 1 (lower is better)
Translates to: TSLTDKTSLQQELKE*STLCFWPLATVLYW
Trigger: CCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTGTAGTGAGGTCTTGTCTGTCAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 90 bp TGGCCATCATCTGCAAGCCAAGGAGAGAGAAGAAACCAAACCTGCTaGCACATTGATCTTGGACTTCTAGTCTCTAGAATTGTGAGAAAA +
Preference number: 1 (lower is better)
Translates to: WPSSASQGERRNQTC*HIDLGLLVSRIVRK
Trigger: TTTTCTCACAATTCTAGAGACTAGAAGTCCAAGATCAATGTGTCAGCAGGTTTGGTTTCTTCTCTCTCCTTGGCTTGCAGATGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR CCA 90 bp AATTATATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTaGGCTCAACAAATCATTGATGAAGCCATTTCCCCACCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: NYILSSHAYLIPGLP*AQQIIDEAISPPFL
Trigger: CAGGAAAGGTGGGGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 90 bp AGTTCAAGTCTTAGCTTAGATTTTCTTCCTTCAGGAAGTGTTCCTTaGTCCTCTAAGATTGGGTTAGGTGCCTTTAGATGTGCTCCAACA +
Preference number: 1 (lower is better)
Translates to: SSSLSLDFLPSGSVP*SSKIGLGAFRCAPT
Trigger: TGTTGGAGCACATCTAAAGGCACCTAACCCAATCTTAGAGGATCAAGGAACACTTCCTGAAGGAAGAAAATCTAAGCTAAGACTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CCA 90 bp AGTCAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATaGTATGTATTTATTCATGTCTTACCAGCAGCATTAGAGTCCCAA +
Preference number: 1 (lower is better)
Translates to: SQKAMLKASGIDCQR*YVFIHVLPAALESQ
Trigger: TTGGGACTCTAATGCTGCTGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 90 bp CAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATaGGTTATATTCTCACACCTTCGGGATGGTATGGCCTTTACTTGG +
Preference number: 1 (lower is better)
Translates to: QFSIQVKLNYLQFSE*VIFSHLRDGMAFTW
Trigger: CCAAGTAAAGGCCATACCATCCCGAAGGTGTGAGAATATAACCCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR TCA 90 bp CTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCATaGCTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCACCTG +
Preference number: 1 (lower is better)
Translates to: LKKLYKQINMTYRSS*LGSYFPLWFFSYHL
Trigger: CAGGTGGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR GCA 90 bp TGTTATTCTTCTGACCTATTAGGTCTTTTGAATATGTCTTTGTGTTaGTGGTTAACCTGTACAACATTCCTTCTTACACTAAGCATCAGT +
Preference number: 1 (lower is better)
Translates to: CYSSDLLGLLNMSLC*WLTCTTFLLTLSIS
Trigger: ACTGATGCTTAGTGTAAGAAGGAATGTTGTACAGGTTAACCAGCAACACAAAGACATATTCAAAAGACCTAATAGGTCAGAAGAATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR GCA 90 bp CAATTTCAAAGTCAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTaGCAGAGATGGTATGTATTTATTCATGTCTTACCAGCAGCATTA +
Preference number: 1 (lower is better)
Translates to: QFQSQKAMLKASGID*QRWYVFIHVLPAAL
Trigger: TAATGCTGCTGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTGACTTTGAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 90 bp TATTCTTCTGACCTATTAGGTCTTTTGAATATGTCTTTGTGTTGCTaGTTAACCTGTACAACATTCCTTCTTACACTAAGCATCAGTCTA +
Preference number: 1 (lower is better)
Translates to: YSSDLLGLLNMSLCC*LTCTTFLLTLSISL
Trigger: TAGACTGATGCTTAGTGTAAGAAGGAATGTTGTACAGGTTAACCAGCAACACAAAGACATATTCAAAAGACCTAATAGGTCAGAAGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCTCACACAGGAGGGCTaGCAGCAATTCATGAGGGGT +
Preference number: 2 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYLTQEG*QQFMRG
Trigger: ACCCCTCATGAATTGCTGTCAGCCCTCCTGTGTGAG...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CAA 90 bp CATTCCCACCACCACCCTCATGGAAGTTCTAGGATAGCCTACAGGTaGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATA +
Preference number: 2 (lower is better)
Translates to: HSHHHPHGSSRIAYR*GKETTYLPFPWGHI
Trigger: TATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACTTCCATGAGGGTGGTGGTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCCCAAGACAAAGCTCTTaGCTACCCTGTGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPPRQSS*LPCGPR
Trigger: CCTTGGGCCACAGGGTAGTCAAGAGCTTTGTCTTGG...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACGCTGACAGCAATTCATaGGGGGTGAATACAAAGCCG +
Preference number: 2 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYADSNS*GVNTKP
Trigger: CGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGC...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR TCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTTGGAGAGGCCCACTGTaGTATGATTGTAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAWRGPL*YDCKSH
Trigger: GTGACTCTTACAATCATATCACAGTGGGCCTCTCCA...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR GCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAGTTCCTGAGACGAAGTaGCTCACACAGTCCACACCA +
Preference number: 2 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPVPETK*LTQSTP
Trigger: TGGTGTGGACTGTGTGAGGCACTTCGTCTCAGGAAC...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGATGCCTATCTAATTCCTaGCCTGCCCTGGGCTCAACA +
Preference number: 2 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRCLSNS*PALGST
Trigger: TGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCA...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCATTTGCAAAAGATGGTTaGGCGCCATGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPFAKDG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAACCATCTTTTGCAAA...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTGTGGTCCCATGGCCATaGATGGCCTTGACTGGGTTC +
Preference number: 2 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTVVPWP*MALTGF
Trigger: GAACCCAGTCAAGGCCATTCATGGCCATGGGACCAC...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGAAGACCCAGACTTCTCTaGCAGACAAGACCTCACTAC +
Preference number: 2 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRRPRLL*QTRPHY
Trigger: GTAGTGAGGTCTTGTCTGTCAGAGAAGTCTGGGTCT...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp CTACAACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTaGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCAC +
Preference number: 2 (lower is better)
Translates to: LQQELKECSTLCFWP*ATVLYWGTTSLEYH
Trigger: GTGGTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp GGAAGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTaGCCCTTTCCCTGGGGTCACATAAACCAAGACAAAGCTCTTGAC +
Preference number: 2 (lower is better)
Translates to: GSSRIAYRLGKETTY*PFPWGHINQDKALD
Trigger: GTCAAGAGCTTTGTCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: PYASLFSVLKVLALPLKNARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: ESLSPASEELMWILSQLSARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAACCAGCCCCATAACCTaGCACACTAACAATCAGATG +
Preference number: 2 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPTSPIT*HTNNQM
Trigger: CATCTGATTGTTAGTGTGCCAGGTTATGGGGCTGGT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAATTCCTGGCCTGCCCTaGGCTCAACAAATCATTGAT +
Preference number: 2 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPIPGLP*AQQIID
Trigger: ATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAAT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp AGACAAGACCTCACTACAACAGGAACTCAAGGAATGCTCCACACTTaGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTC +
Preference number: 2 (lower is better)
Translates to: RQDLTTTGTQGMLHT*FLAFGYCSLLGYHF
Trigger: GAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTGTAGTGAGGTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLASLAS*YALPEV
Trigger: TACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGC...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTCTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYALSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR GCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGACAGGAACTCAAGGAATaGTCCACACTTTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRQELKE*STLCFW
Trigger: CCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTG...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCATGCAGTGACAGAGCCTaGGTTGCTATATTCATGACA +
Preference number: 2 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPCSDRA*VAIFMT
Trigger: TGTCATGAATATAGCAACCCAGGCTCTGTCACTGCA...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp AGGTGCCCAAAGAATGTCACAGACCCAGCAACTGACAAATATTTTTaGAGCACCAAAGCCCAAGGGAATGTACTAGGAATTGTGGGCGTA +
Preference number: 2 (lower is better)
Translates to: RCPKNVTDPATDKYF*STKAQGNVLGIVGV
Trigger: TACGCCCACAATTCCTAGTACATTCCCTTGGGCTTTGGTGCTCAAAAAATATTTGTCAGTTGCTGGGTCTGTGACATTCTTTGGGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR GCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGAATTAGCACTGGGAAATaGTGCACAAAGCAAGCTAGA +
Preference number: 2 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRISTGK*CTKQAR
Trigger: TCTAGCTTGCTTTGTGCAGCATTTCCCAGTGCTAAT...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR GCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCACACTAACAATCAGATaGAGTGACAGAGCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISTLTIR*SDRAWV
Trigger: AACCCAGGCTCTGTCACTGCATCTGATTGTTAGTGT...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR GCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCCCCACCTTTCCTGCTaGTCTGTCACTGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNPHLSC*SVTVLY
Trigger: ATAAAGAACAGTGACAGAGCAGCAGGAAAGGTGGGG...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR GCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATTTTCCCCACCTTTCCTaGTGCTCTGTCACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNFPHLS*CSVTVL
Trigger: AAGAACAGTGACAGAGCAGCAGGAAAGGTGGGGAAA...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTTTGTTTCTGGCCTTTaGCTACTGTTCTTTACTGGG +
Preference number: 2 (lower is better)
Translates to: CLLTGTSPLALLKSLARPFVSGL*LLFFTG
Trigger: CCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTCCACACTTTGTTTCTaGCCTTTGGCTACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: CLLTGTSPLALLKSLARPSTLCF*PLATVL
Trigger: AAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: LESLSPASEELMWILSQLASLAS*YALPEV
Trigger: TACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGC...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTGGAGAGGCCCACTGTaGTATGATTGTAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: PYASLFSVLKVLALPLKNWRGPL*YDCKSH
Trigger: GTGACTCTTACAATCATATCACAGTGGGCCTCTCCA...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAAAACAATCAGATGCAGTaGCAGAGCCTGGGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKNNQMQ*QSLGCY
Trigger: ATAGCAACCCAGGCTCTGTCACTGCATCTGATTGTT...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR GCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAAAGCACTGGGAAATGCTaGACAAAGCAAGCTAGACTC +
Preference number: 2 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKSTGKC*TKQARL
Trigger: GAGTCTAGCTTGCTTTGTGCAGCATTTCCCAGTGCT...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCATGGAGTGCAGTGGTGTaGTCTTGCCTCACTGAAGCC +
Preference number: 2 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPWSAVV*SCLTEA
Trigger: GGCTTCAGTGAGGCAAGATCACACCACTGCACTCCA...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGGGGAGAGAGTATACTaGAGTGGCTCCACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPGERVY*SGSTVR
Trigger: CCTGACTGTGGAGCCACTTCAGTATACTCTCTCCCC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR TCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTCTCACACAGGAGGGCTaGCAGCAATTCATGAGGGGT +
Preference number: 2 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYILTQEG*QQFMRG
Trigger: ACCCCTCATGAATTGCTGTCAGCCCTCCTGTGTGAG...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CCA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCGGTGATGCTCACATGTaGCAAGTTTGTCAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTGDAHM*QVCQVQ
Trigger: TTGCACTTGACAAACTTGCCACATGTGAGCATCACC...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR TCA 90 bp ATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTCTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: MALTGFLLSLLMLVSFQSLSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...AGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTCTCCATTTATGCGTaGTCCCATGGCCATGAATGG +
Preference number: 2 (lower is better)
Translates to: HHISNSDSISPMSLDLAKFSIYA*SHGHEW
Trigger: CCATTCATGGCCATGGGACCACGCATAAATGGAGAA...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp CTTCCTTACATGATTCTCCATTTGCAGCTAACTTCTAAACTGCAAATCAAACTAGCTGACAGCAATTCATaGGGGGTGAATACAAAGCCG +
Preference number: 2 (lower is better)
Translates to: LPYMILHLQLTSKLQIKLADSNS*GVNTKP
Trigger: CGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGC...TAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFMNGLD*VPVKSP
Trigger: AGGAGACTTAACAGGAACCCAGTCAAGGCCATTCAT...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGACATAAGACAAAACTaGACATGTGCGAGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPDIRQN*TCARCP
Trigger: TGGGCACCTCGCACATGTTCAGTTTTGTCTTATGTC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp CATTTGCAGCTAACTTCTAAACTGCAAATCAAACTATGTCACTCCTaGTCCAAAATCCTTCAACTGCATCCCACTGCACTTAAGAAACTA +
Preference number: 2 (lower is better)
Translates to: HLQLTSKLQIKLCHS*SKILQLHPTALKKL
Trigger: TAGTTTCTTAAGTGCAGTGGGATGCAGTTGAAGGATTTTGGACAAGGAGTGACATAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR TCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTAGAAAAGGGAAGTCTTaGCTGACTGTGACCATTAGT +
Preference number: 2 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFRKGKS*LTVTIS
Trigger: ACTAATGGTCACAGTCAGTCAAGACTTCCCTTTTCT...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTCTGAAGAATTAATGTaGATCCTTTCACAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTSEELM*ILSQLS
Trigger: TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGA...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGGGTGATGCTCACATGTaGCAAGTTTGTCAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWGDAHM*QVCQVQ
Trigger: TTGCACTTGACAAACTTGCCACATGTGAGCATCACC...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR TCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTCTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRLSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTATCTGAAGAATTAATGTaGATCCTTTCACAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: LSHHISNSDSISPMSLDLSEELM*ILSQLS
Trigger: TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGA...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR CAA 90 bp GTGGTATGTTATTCTTCTGACCTATTAGGTCTTTTGAATATGTCTTaGTGTTGCTGGTTAACCTGTACAACATTCCTTCTTACACTAAGC +
Preference number: 2 (lower is better)
Translates to: VVCYSSDLLGLLNMS*CCWLTCTTFLLTLS
Trigger: GCTTAGTGTAAGAAGGAATGTTGTACAGGTTAACCAGCAACACAAAGACATATTCAAAAGACCTAATAGGTCAGAAGAATAACATACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 90 bp TCTTTAATAGGACTATACTCTTGCCTTCCTTACATGATTCTCCATTaGCAGCTAACTTCTAAACTGCAAATCAAACTATGTCACTCCTTG +
Preference number: 2 (lower is better)
Translates to: SLIGLYSCLPYMILH*QLTSKLQIKLCHSL
Trigger: CAAGGAGTGACATAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAGGCAAGAGTATAGTCCTATTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591206.5
3UTR-3UTR TCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTTTGGCACTTATTTTGTaGTTTCCCTACTTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFLALIL*FPYLSS
Trigger: GCTACTTAAGTAGGGAAATCACAAAATAAGTGCCAA...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCCCACCTATTTACCTaGCTTTCTCTTACTCATAGT +
Preference number: 2 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFSHLFT*LSLTHS
Trigger: ACTATGAGTAAGAGAAAGCCAGGTAAATAGGTGGGA...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CCA 90 bp TTTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATCTGCAATTTTCAGAATaGGTTATATTCTCACACCTT +
Preference number: 2 (lower is better)
Translates to: FSSLVLLLPPVNSPFKSNLQFSE*VIFSHL
Trigger: AAGGTGTGAGAATATAACCCATTCTGAAAATTGCAG...ATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR GCA 90 bp TTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTCCAACAGTACCCACTaGCTACTTATATTCTATAAT +
Preference number: 2 (lower is better)
Translates to: FSYHLSILHSSQIKLPAISNSTH*LLIFYN
Trigger: ATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGA...AATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CCA 90 bp CTTCCTTACATGATTCTCCATTTGCAGCTAACTTCTAAACTGCAAATCAAACTACTGCAATTTTCAGAATaGGTTATATTCTCACACCTT +
Preference number: 2 (lower is better)
Translates to: LPYMILHLQLTSKLQIKLLQFSE*VIFSHL
Trigger: AAGGTGTGAGAATATAACCCATTCTGAAAATTGCAG...TAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR TCA 72 bp CTTTCCCTGGGGTCACATAAACCAAGACAAAGCTCTTaGCTACCCTGTGGCCCAAGGGCTCCAGGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: LSLGSHKPRQSS*LPCGPRAPGFV
Trigger: GACAAAACCTGGAGCCCTTGGGCCACAGGGTAGTCAAGAGCTTTGTCTTGGTTTATGTGACCCCAGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp CAGGGAAACTCACACAGGAGGGCTGACAGCAATTCATaGGGGGTGAATACAAAGCCGCTAAAGCGAGCACCT +
Preference number: 3 (lower is better)
Translates to: QGNSHRRADSNS*GVNTKPLKRAP
Trigger: AGGTGCTCGCTTTAGCGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGCCCTCCTGTGTGAGTTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CCA 72 bp TCTTTACTGGGGTACCACTTCCCTAGAGTACCACCTTaGCTAACTCCTCCTCATCCTTCAGGCCATTTCCCC +
Preference number: 3 (lower is better)
Translates to: SLLGYHFPRVPP*LTPPHPSGHFP
Trigger: GGGGAAATGGCCTGAAGGATGAGGAGGAGTTAGCCAAGGTGGTACTCTAGGGAAGTGGTACCCCAGTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp GCACTGCTTAAGAGTCTGGCCAGACCCAGACTTCTCTaGCAGACAAGACCTCACTACAACAGGAACTCAAGG +
Preference number: 3 (lower is better)
Translates to: ALLKSLARPRLL*QTRPHYNRNSR
Trigger: CCTTGAGTTCCTGTTGTAGTGAGGTCTTGTCTGTCAGAGAAGTCTGGGTCTGGCCAGACTCTTAAGCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CAA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTGTCATGAGGTTTAAATaGTTGGAGAGGCCCACTGTG +
Preference number: 3 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAVMRFK*LERPTV
Trigger: CACAGTGGGCCTCTCCAACAATTTAAACCTCATGAC...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CAA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAGGAATGCTCCACACTTaGTTTCTGGCCTTTGGCTAC +
Preference number: 3 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPGMLHT*FLAFGY
Trigger: GTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCC...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp ACTAGCCTCATGATATGCCTTGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCAGGTGATTTATTGACG +
Preference number: 3 (lower is better)
Translates to: TSLMICLARSSA*DGDLGAGDLLT
Trigger: CGTCAATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATATCATGAGGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR TCA 72 bp TTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATaGATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: LLVLHLCVVPWP*MALTGFLLSLL
Trigger: AAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR GCA 72 bp AGGAGCATTCCACTTTCACTGCCTGTCTGGCTGCCTTaGCCATTAGACTGTAGAGACTACAGTCTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: RSIPLSLPVWLP*PLDCRDYSLVF
Trigger: GAAAACAAGACTGTAGTCTCTACAGTCTAATGGGCAAGGCAGCCAGACAGGCAGTGAAAGTGGAATGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 72 bp ATATTCTCACACCTTCGGGATGGTATGGCCTTTACTTaGGCTACTCCTCCTCCCACCTATTTACCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: IFSHLRDGMAFT*ATPPPTYLPGF
Trigger: AAAGCCAGGTAAATAGGTGGGAGGAGGAGTAGCCCAAGTAAAGGCCATACCATCCCGAAGGTGTGAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CCA 72 bp CAGAATGGGTTATATTCTCACACCTTCGGGATGGTATaGCCTTTACTTGGGCTACTCCTCCTCCCACCTATT +
Preference number: 3 (lower is better)
Translates to: QNGLYSHTFGMV*PLLGLLLLPPI
Trigger: AATAGGTGGGAGGAGGAGTAGCCCAAGTAAAGGCCATACCATCCCGAAGGTGTGAGAATATAACCCATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CAA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACGGGCTCAACAAATCATaGATGAAGCCATTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYGLNKS*MKPFPH
Trigger: GTGGGGAAATGGCTTCATCAATGATTTGTTGAGCCC...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CAA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAACAGGAACTTCTCCATaGGCACTGCTTAAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPTGTSP*ALLKSL
Trigger: CAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CAA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCCTTTGTTTCTGGCCTTaGGCTACTGTTCTTTACTGG +
Preference number: 3 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPLCFWP*ATVLYW
Trigger: CCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAG...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp TCTCTTCCTGCTAGGCCCCTCAGAAAAGGGAAGTCTTaGCTGACTGTGACCATTAGTTTCAGTTGTCACTTC +
Preference number: 3 (lower is better)
Translates to: SLPARPLRKGKS*LTVTISFSCHF
Trigger: GAAGTGACAACTGAAACTAATGGTCACAGTCAGTCAAGACTTCCCTTTTCTGAGGGGCCTAGCAGGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 72 bp TTTATGCGTGGTCCCATGGCCATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTT +
Preference number: 3 (lower is better)
Translates to: FMRGPMAMNGLD*VPVKSPYASLF
Trigger: AAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACCACGCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR CCA 72 bp CTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTaGGCTCAACAAATCATTGATGAAGCCATTTCCCCA +
Preference number: 3 (lower is better)
Translates to: LSSHAYLIPGLP*AQQIIDEAISP
Trigger: TGGGGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 72 bp CAACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTaGCCTTTGGCTACTGTTCTTTACTGGGGTACCACT +
Preference number: 3 (lower is better)
Translates to: QQELKECSTLCF*PLATVLYWGTT
Trigger: AGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 72 bp AGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTaGGGTCACATAAACCAAGACAAAGCTCTTGACTAC +
Preference number: 3 (lower is better)
Translates to: RLGKETTYLPFP*GHINQDKALDY
Trigger: GTAGTCAAGAGCTTTGTCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp AGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTAGCGCCTGAGATGGAG +
Preference number: 3 (lower is better)
Translates to: SYKFLVGASLAS*YALPEVAPEME
Trigger: CTCCATCTCAGGCGCTACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGCACCTACAAGAAACTTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR GCA 72 bp ACAGACAAGACCTCACTACAACAGGAACTCAAGGAATaGTCCACACTTTGTTTCTGGCCTTTGGCTACTGTT +
Preference number: 3 (lower is better)
Translates to: TDKTSLQQELKE*STLCFWPLATV
Trigger: AACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGTTGTAGTGAGGTCTTGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR GCA 72 bp TCTCAACAACAACAAGAAAAGAAGGTGGCCATCATCTaGAAGCCAAGGAGAGAGAAGAAACCAAACCTGCTG +
Preference number: 3 (lower is better)
Translates to: SQQQQEKKVAII*KPRREKKPNLL
Trigger: CAGCAGGTTTGGTTTCTTCTCTCTCCTTGGCTTGCAGATGATGGCCACCTTCTTTTCTTGTTGTTGTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR CCA 72 bp ATTGGAACTTTCTTATGGGGAGAGAGTATACTGAAGTaGCTCCACAGTCAGGTTGTGGGTTCAAAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: IGTFLWGESILK*LHSQVVGSKSD
Trigger: GTCAGACTTTGAACCCACAACCTGACTGTGGAGCCACTTCAGTATACTCTCTCCCCATAAGAAAGTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp TTTCTATTGGAACTTTCTTATGGGGAGAGAGTATACTaGAGTGGCTCCACAGTCAGGTTGTGGGTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: FLLELSYGERVY*SGSTVRLWVQS
Trigger: ACTTTGAACCCACAACCTGACTGTGGAGCCACTTCAGTATACTCTCTCCCCATAAGAAAGTTCCAATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp TCTGCAAGCCAAGGAGAGAGAAGAAACCAAACCTGCTaGCACATTGATCTTGGACTTCTAGTCTCTAGAATT +
Preference number: 3 (lower is better)
Translates to: SASQGERRNQTC*HIDLGLLVSRI
Trigger: AATTCTAGAGACTAGAAGTCCAAGATCAATGTGTCAGCAGGTTTGGTTTCTTCTCTCTCCTTGGCTTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR CCA 72 bp CCTGGCACACTAACAATCAGATGCAGTGACAGAGCCTaGGTTGCTATATTCATGACACTTTCATACAAAATG +
Preference number: 3 (lower is better)
Translates to: PGTLTIRCSDRA*VAIFMTLSYKM
Trigger: CATTTTGTATGAAAGTGTCATGAATATAGCAACCCAGGCTCTGTCACTGCATCTGATTGTTAGTGTGCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CCA 72 bp CTTTACTTGGGCTACTCCTCCTCCCACCTATTTACCTaGCTTTCTCTTACTCATAGTTCAAGTCTTAGCTTA +
Preference number: 3 (lower is better)
Translates to: LYLGYSSSHLFT*LSLTHSSSLSL
Trigger: TAAGCTAAGACTTGAACTATGAGTAAGAGAAAGCCAGGTAAATAGGTGGGAGGAGGAGTAGCCCAAGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CAA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 3 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR-3UTR CAA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 3 (lower is better)
Translates to: ESLSPASEELMWILSQLSMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR GCA 72 bp AACAAATCATTGATGAAGCCATTTCCCCACCTTTCCTaGTGCTCTGTCACTGTTCTTTATTGGGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: NKSLMKPFPHLS*CSVTVLYWVSF
Trigger: AAAACTGACCCAATAAAGAACAGTGACAGAGCAGCAGGAAAGGTGGGGAAATGGCTTCATCAATGATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR-3UTR CAA 90 bp TTTCTGTTGTTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAAGTCATGAGGTTTAAATaGTTGGAGAGGCCCACTGTG +
Preference number: 3 (lower is better)
Translates to: FLLFTTHSVVFCCGNPSKVMRFK*LERPTV
Trigger: CACAGTGGGCCTCTCCAACAATTTAAACCTCATGAC...TTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAACAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR-3UTR CAA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 3 (lower is better)
Translates to: HHISNSDSISPMSLDLAKMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
3UTR TCA 72 bp CTTAGCTTAGATTTTCTTCCTTCAGGAAGTGTTCCTTaGTCCTCTAAGATTGGGTTAGGTGCCTTTAGATGT +
Preference number: 3 (lower is better)
Translates to: LSLDFLPSGSVP*SSKIGLGAFRC
Trigger: ACATCTAAAGGCACCTAACCCAATCTTAGAGGATCAAGGAACACTTCCTGAAGGAAGAAAATCTAAGCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CCA 72 bp ATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATaGGTTATATTCTCACACCTTCGGGATGGTATGGCC +
Preference number: 3 (lower is better)
Translates to: IQVKLNYLQFSE*VIFSHLRDGMA
Trigger: GGCCATACCATCCCGAAGGTGTGAGAATATAACCCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR-3UTR CAA 90 bp TTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAACATACTATACTGTGTTCTGTCTGTTaGGATATCTTGCCACTTTTC +
Preference number: 3 (lower is better)
Translates to: FTTHSVVFCCGNPSKHTILCSVC*DILPLF
Trigger: GAAAAGTGGCAAGATATCCAAACAGACAGAACACAG...TATAGTATGTTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR CCA 72 bp GCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATaGTATGTATTTATTCATGTCTTACCAGCAGCATTA +
Preference number: 3 (lower is better)
Translates to: AMLKASGIDCQR*YVFIHVLPAAL
Trigger: TAATGCTGCTGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp AGGTTTCAATGTTACATTCCCACTTTTCGTATTTCCTaGGTATTCCTAATAAGAGAAGAGCTGGAAGTAATG +
Preference number: 3 (lower is better)
Translates to: RFQCYIPTFRIS*VFLIREELEVM
Trigger: CATTACTTCCAGCTCTTCTCTTATTAGGAATACTCAGGAAATACGAAAAGTGGGAATGTAACATTGAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp CTATACAAACAAATTAACATGACATACAGGTCTTCATaGCTTGGATCCTATTTTCCTCTCTGGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: LYKQINMTYRSS*LGSYFPLWFFS
Trigger: AGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATGTCATGTTAATTTGTTTGTATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR GCA 72 bp TCTGACCTATTAGGTCTTTTGAATATGTCTTTGTGTTaGTGGTTAACCTGTACAACATTCCTTCTTACACTA +
Preference number: 3 (lower is better)
Translates to: SDLLGLLNMSLC*WLTCTTFLLTL
Trigger: TAGTGTAAGAAGGAATGTTGTACAGGTTAACCAGCAACACAAAGACATATTCAAAAGACCTAATAGGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR GCA 72 bp AGTCAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTaGCAGAGATGGTATGTATTTATTCATGTCTTACCA +
Preference number: 3 (lower is better)
Translates to: SQKAMLKASGID*QRWYVFIHVLP
Trigger: TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR TCA 72 bp CCACTGCACTTAAGAAACTATACAAACAAATTAACATaGCATACAGGTCTTCATGACTTGGATCCTATTTTC +
Preference number: 3 (lower is better)
Translates to: PLHLRNYTNKLT*HTGLHDLDPIF
Trigger: GAAAATAGGATCCAAGTCATGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATGGAGCGGCCAGGAAATaGGCCACCCACCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYGAARK*ATHPEL
Trigger: CAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCC...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATGGAGCGGCCAGGAAATaGGCCACCCACCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYGAARK*ATHPEL
Trigger: CAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCC...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCGGAGCGGCCAGGAAATaGGCCACCCACCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISGAARK*ATHPEL
Trigger: CAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCC...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTCACTGCTGGTCCCTGTaGACTAGCTGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAHCWSL*TSWDLL
Trigger: CAGCAGGTCCCAGCTAGTCCACAGGGACCAGCAGTG...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACTGCTGGTCCCTGTaGACTAGCTGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYHCWSL*TSWDLL
Trigger: CAGCAGGTCCCAGCTAGTCCACAGGGACCAGCAGTG...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp ATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTGGAGCGGCCAGGAAATaGGCCACCCACCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: MALTGFLLSLLMLVSFQSGAARK*ATHPEL
Trigger: CAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCC...AGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTGTGGTCCCATGGCCATaGATGGCCTTGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAVVPWP*MALTGF
Trigger: GAACCCAGTCAAGGCCATTCATGGCCATGGGACCAC...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCACCACCCACCCCGAGCTaGAAGCCACAAAGACCGGAA +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPPPTPS*KPQRPE
Trigger: TTCCGGTCTTTGTGGCTTGCAGCTCGGGGTGGGTGG...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCACTGCTGGTCCCTGTaGACTAGCTGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYHCWSL*TSWDLL
Trigger: CAGCAGGTCCCAGCTAGTCCACAGGGACCAGCAGTG...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATCTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACACTCACACAGGAGGGCTaGCAGCAATTCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTLTQEG*QQFMRG
Trigger: ACCCCTCATGAATTGCTGTCAGCCCTCCTGTGTGAG...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCCTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATCTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTTCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYASGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACAGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTEVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCCCAAGACAAAGCTCTTaGCTACCCTGTGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPPRQSS*LPCGPR
Trigger: CCTTGGGCCACAGGGTAGTCAAGAGCTTTGTCTTGG...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTGGAGTGCAGTGGTGTaGTCTTGCCTCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPWSAVV*SCLTEA
Trigger: GGCTTCAGTGAGGCAAGATCACACCACTGCACTCCA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCCACCTCCCGGGTTCATaGAATTCTCCTGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPHLPGS*NSPVSA
Trigger: GGCTGAGACAGGAGAATTGCATGAACCCGGGAGGTG...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 72 bp CACCACCCTCATGGAAGTTCTAGGATAGCCTACAGGTaGGGCAAGGAAACCACATATTTGCCCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HHPHGSSRIAYR*GKETTYLPFPW
Trigger: CCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACTTCCATGAGGGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATTCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYSGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATCTGTTCTCAAACTCCTaGCCTTGTTATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYLFSNS*PCYPPA
Trigger: GGCGGGTGGATAACAAGGTCAGGAGTTTGAGAACAG...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp ATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTCTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: MALTGFLLSLLMLVSFQSLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...AGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGCCAGGAGGCAGAGTTTaGGGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLPGGRV*GEPRSC
Trigger: GCACGATCTTGGCTCACCGCAAACTCTGCCTCCTGG...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACTTCCTCGCCGCTTTCTaGATTATGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYFLAAF*IMLLNP
Trigger: TGGGTTCAGCAACATAATCCAGAAAGCGGCGAGGAA...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGCTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGCTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYCVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTCTCTTGACTACCCTGTaGCCCAAGGGCTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSLLTTL*PKGSRF
Trigger: AAACCTGGAGCCCTTGGGCCACAGGGTAGTCAAGAG...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCACATTGCACTCCAGCCTaGACAAGAGCGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPHCTPA*TRANSI
Trigger: GATGGAGTTCGCTCTTGTCCAGGCTGGAGTGCAATG...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTTTGCAAAAGATGGTTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPFAKDG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAACCATCTTTTGCAAA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTGGAGCGGCCAGGAAATaGGCCACCCACCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFGAARK*ATHPEL
Trigger: CAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCC...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACACTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTLRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGATCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRSGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTGTGGTCCCATGGCCATaGATGGCCTTGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLVVPWP*MALTGF
Trigger: GAACCCAGTCAAGGCCATTCATGGCCATGGGACCAC...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAACTCTAGCAGACTCTTaGGGTATAGGCTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPTLADS*GIGWAL
Trigger: AAGAGCCCAGCCTATACCTCAAGAGTCTGCTAGAGT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATTGCCCAGGCTCGGCTTaGACTCCTAGACTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNCPGSA*TPRLKQ
Trigger: TTGCTTGAGTCTAGGAGTTCAAGCCGAGCCTGGGCA...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATGGGGAGAGAGTATACTaGAGTGGCTCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNGERVY*SGSTVR
Trigger: CCTGACTGTGGAGCCACTTCAGTATACTCTCTCCCC...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCCTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp GACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: DWVPVKSPYASLFSVLKVGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...GACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGTCTCCCAGGCTGGAGTaGAGTGGTGTGATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLSPRLE*SGVILP
Trigger: AGGCAAGATCACACCACTGCACTCCAGCCTGGGAGA...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTTCCCTGTGGACTAGCTaGGACCTGCTGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFSLWTS*DLLPWV
Trigger: GACCCAGGGCAGCAGGTCCCAGCTAGTCCACAGGGA...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTACACTGCTGGTCCCTGTaGACTAGCTGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLHCWSL*TSWDLL
Trigger: CAGCAGGTCCCAGCTAGTCCACAGGGACCAGCAGTG...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATCTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PYASLFSVLKVLALPLKNLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAMNGLD*VPVKSP
Trigger: AGGAGACTTAACAGGAACCCAGTCAAGGCCATTCAT...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTCCACAGTCAGGTTGTaGGTTCAAAGTCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPSTVRL*VQSLTS
Trigger: GGAGGTCAGACTTTGAACCCACAACCTGACTGTGGA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCACAAAGGGCCGCGACCTaGGGATGGGCAGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PTALKKLYKQINMTYRSSQRAAT*GWAGRG
Trigger: TCCTCGGCCTGCCCATCCCCAGGTCGCGGCCCTTTG...TGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CCA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACAGTTCCCCAGTCGCTTaGAGACGCCGCGCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYSSPVA*RRRAGQ
Trigger: TTGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACT...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR TCA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCCGAAATGAAGGTTCCTaGGGGAGTCCCTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPRNEGS*GSPCDF
Trigger: AAAATCACAGGGACTCCCTCAGGAACCTTCATTTCG...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTGCCAGAAGTAGCGCCTaGGATGGAGATTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLARSSA*DGDLGA
Trigger: TGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGC...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAAACAATCAGATGCAGTaGCAGAGCCTGGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPNNQMQ*QSLGCY
Trigger: ATAGCAACCCAGGCTCTGTCACTGCATCTGATTGTT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCAGACCCAGACTTCTCTaGCAGACAAGACCTCACTAC +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISRPRLL*QTRPHY
Trigger: GTAGTGAGGTCTTGTCTGTCAGAGAAGTCTGGGTCT...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCGACATAAGACAAAACTaGACATGTGCGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPDIRQN*TCARCP
Trigger: TGGGCACCTCGCACATGTTCAGTTTTGTCTTATGTC...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTACTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCCCCACCTTTCCTGCTaGTCTGTCACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYPHLSC*SVTVLY
Trigger: ATAAAGAACAGTGACAGAGCAGCAGGAAAGGTGGGG...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTCTTCTCCATTGGCACTaGTTAAGAGTCTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSLLHWH*LRVWPD
Trigger: GTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAG...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTTCCCTGTGGACTAGCTaGGACCTGCTGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFSLWTS*DLLPWV
Trigger: GACCCAGGGCAGCAGGTCCCAGCTAGTCCACAGGGA...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCCCTGTGGACTAGCTaGGACCTGCTGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRSLWTS*DLLPWV
Trigger: GACCCAGGGCAGCAGGTCCCAGCTAGTCCACAGGGA...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGATTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCACCAGCCCCATAACCTaGCACACTAACAATCAGATG +
Preference number: 4 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPTSPIT*HTNNQM
Trigger: CATCTGATTGTTAGTGTGCCAGGTTATGGGGCTGGT...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCATTCCTGGCCTGCCCTaGGCTCAACAAATCATTGAT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPIPGLP*AQQIID
Trigger: ATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAAT...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYNSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DWVPVKSPYASLFSVLKVEVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...GACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGTTCCCAACGGATAGCTaGAGAAGCTTTGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPYASLFSVLKVLALPLKFPTDS*RSFGRS
Trigger: AGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAA...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GTCTCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTGTGGTCCCATGGCCATaGATGGCCTTGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VSRIVRKEISVVYHPFCGVVPWP*MALTGF
Trigger: GAACCCAGTCAAGGCCATTCATGGCCATGGGACCAC...ACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTATAGTGTGGACTCTTTaGTGGCGCATAAGGACCGAT +
Preference number: 4 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSIVWTL*WRIRTD
Trigger: ATCGGTCCTTATGCGCCATCAAAGAGTCCACACTAT...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATTCAGGAAGTGTTCCTTaGTCCTCTAAGATTGGGTTA +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYSGSVP*SSKIGL
Trigger: TAACCCAATCTTAGAGGATCAAGGAACACTTCCTGA...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACACATACAGGTCTTCATaGCTTGGATCCTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYTYRSS*LGSYFP
Trigger: AGGAAAATAGGATCCAAGTCATGAAGACCTGTATGT...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGAGTGCTGGCCTCCTCTaGGTTCCCCAGTCGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRSAGLL*VPQSLG
Trigger: TCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACT...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR GCA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSVQLVL*LRRSVS
Trigger: ACTCACACTCCTTCGCAAGCACAGAACCAGTTGTAC...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLVQLVL*LRRSVS
Trigger: ACTCACACTCCTTCGCAAGCACAGAACCAGTTGTAC...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCACACTAACAATCAGATaGAGTGACAGAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPTLTIR*SDRAWV
Trigger: AACCCAGGCTCTGTCACTGCATCTGATTGTTAGTGT...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCAGGAACTCAAGGAATaGTCCACACTTTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYQELKE*STLCFW
Trigger: CCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTG...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCAAAGCTCAGTACAACTaGTTCTGTGCTTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPKAQYN*FCACEG
Trigger: TCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTT...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACATTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGTCCCTGTGGACTAGCTaGGACCTGCTGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWSLWTS*DLLPWV
Trigger: GACCCAGGGCAGCAGGTCCCAGCTAGTCCACAGGGA...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTTCCCTGTGGACTAGCTaGGACCTGCTGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYISLWTS*DLLPWV
Trigger: GACCCAGGGCAGCAGGTCCCAGCTAGTCCACAGGGA...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCACTTCCATGGCACTGCTaGTCCCTGTGGACTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASLPWHC*SLWTSW
Trigger: CCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAG...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGTTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISCVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCTCTGATCCCATCTGTGTTCTGTCTGTTTGGATATCTTGCCACTTTTCTCTGGTTCTCCATTTATGCGTaGTCCCATGGCCATGAATGG +
Preference number: 4 (lower is better)
Translates to: PLIPSVFCLFGYLATFLWFSIYA*SHGHEW
Trigger: CCATTCATGGCCATGGGACCACGCATAAATGGAGAA...CCAGAGAAAAGTGGCAAGATATCCAAACAGACAGAACACAGATGGGATCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCACTAAAACTGCCCCCTTaGGAAGGAGATCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPLKLPP*EGDLSF
Trigger: GAAACTAAGATCTCCTTCCCAAGGGGGCAGTTTTAG...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAATGCCTATCTAATTCCTaGCCTGCCCTGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKCLSNS*PALGST
Trigger: TGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCA...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCACTGCTTAAGAGTCTaGCCAGACCCAGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNHCLRV*PDPDFS
Trigger: AGAGAAGTCTGGGTCTGGCCAGACTCTTAAGCAGTG...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACTATTTGCCCTTTCCCTaGGGTCACATAAACCAAGAC +
Preference number: 4 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYYLPFP*GHINQD
Trigger: GTCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATA...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGCAGGCTGGAATACAGTaGTACAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLQAGIQ*YNLGSL
Trigger: CAGTGAGCCGAGATTGTACCACTGTATTCCAGCCTG...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATTCCTATTTTCCTCTCTaGTTCTTCTCTTACCACCTG +
Preference number: 4 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYSYFPL*FFSYHL
Trigger: CAGGTGGTAAGAGAAGAACCAGAGAGGAAAATAGGA...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CAA 72 bp GAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTaGGCTACTGTTCTTTACTGGGGTACCACTTCCCTA +
Preference number: 4 (lower is better)
Translates to: ELKECSTLCFWP*ATVLYWGTTSL
Trigger: TAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTSGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLEVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTTCCCAACGGATAGCTaGAGAAGCTTTGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PYASLFSVLKVLALPLKNFPTDS*RSFGRS
Trigger: AGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAA...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGTGGCTGGCAAAGTGTTaGTGGCAAAGCAAGAAATTG +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLWLAKC*WQSKKL
Trigger: CAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCA...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCGCTGACAGCAATTCATaGGGGGTGAATACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTADSNS*GVNTKP
Trigger: CGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGC...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTCTCACACAGGAGGGCTaGCAGCAATTCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQILTQEG*QQFMRG
Trigger: ACCCCTCATGAATTGCTGTCAGCCCTCCTGTGTGAG...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp TTTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: FSSLVLLLPPVNSPFKSNILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...ATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp CCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCACCACCCACCCCGAGCTaGAAGCCACAAAGACCGGAA +
Preference number: 4 (lower is better)
Translates to: PTALKKLYKQINMTYRSSPPTPS*KPQRPE
Trigger: TTCCGGTCTTTGTGGCTTGCAGCTCGGGGTGGGTGG...TGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591206.5
CDS-3UTR GCA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCACAAAACTGAACATGTaGGAGGTGCCCAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPTKLNM*EVPKEC
Trigger: ACATTCTTTGGGCACCTCGCACATGTTCAGTTTTGT...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTCACTGCTGGTCCCTGTaGACTAGCTGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIHCWSL*TSWDLL
Trigger: CAGCAGGTCCCAGCTAGTCCACAGGGACCAGCAGTG...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGAATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRMSVDS*DALRHV
Trigger: AACATGTCTCAGAGCATCCCAAGAGTCAACAGACAT...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWCVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATGCCGGGAAAACTTCCTaGAGAAACACATTCCCAACG +
Preference number: 4 (lower is better)
Translates to: PYASLFSVLKVLALPLKNAGKTS*RNTFPT
Trigger: CGTTGGGAATGTGTTTCTCCAGGAAGTTTTCCCGGC...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR CCA 90 bp ATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTGGGGTTTCACCATATTaGCCAGGCTGTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: MALTGFLLSLLMLVSFQSGVSPY*PGCSQT
Trigger: AGTTTGAGAACAGCCTGGCCAATATGGTGAAACCCC...AGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CCA 90 bp TTTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATCAGGAGTTTGAGTGCTaGCCTCCTCTGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FSSLVLLLPPVNSPFKSNQEFEC*PPLSSP
Trigger: TGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTG...ATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR TCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLACEGV*VISSFR
Trigger: GCGGAAAGAAGAGATTACTCACACTCCTTCGCAAGC...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAACTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKLRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCACGAAATGAAGGTTCCTaGGGGAGTCCCTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSRNEGS*GSPCDF
Trigger: AAAATCACAGGGACTCCCTCAGGAACCTTCATTTCG...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR TCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTCTTAATTCCTCGAAATaGAGGTTCCTGAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLLNSSK*RFLRES
Trigger: GGACTCCCTCAGGAACCTTCATTTCGAGGAATTAAG...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR TCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSASLAS*YALPEV
Trigger: TACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGC...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp GACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTGGAGAGGCCCACTGTaGTATGATTGTAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: DWVPVKSPYASLFSVLKVWRGPL*YDCKSH
Trigger: GTGACTCTTACAATCATATCACAGTGGGCCTCTCCA...GACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAAACTAATTCCTCGAAATaGAGGTTCCTGAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKTNSSK*RFLRES
Trigger: GGACTCCCTCAGGAACCTTCATTTCGAGGAATTAGT...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGATGAGTAATCAGCTCTaGGCTCTGCCTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLMSNQL*ALPESF
Trigger: AAAGCTTTCAGGCAGAGCTCAGAGCTGATTACTCAT...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCAGAAAAGGGAAGTCTTaGCTGACTGTGACCATTAGT +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISRKGKS*LTVTIS
Trigger: ACTAATGGTCACAGTCAGTCAAGACTTCCCTTTTCT...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGTGATCTTGCCTCACTaGAGCCTCGACTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPVILPH*SLDFQG
Trigger: GCCCTGGAAGTCGAGGCTTCAGTGAGGCAAGATCAC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCACTGGTCTCGAACTCCTaGTCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPLVSNS*SQVIHP
Trigger: CGGGTGGATCACCTGAGATCAGGAGTTCGAGACCAG...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTGCCTCTCACTCCCTCTaGTCCCATCTGTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRASHSL*SHLCSV
Trigger: GACAGAACACAGATGGGATCAGAGGGAGTGAGAGGC...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSVQLVL*LRRSVS
Trigger: ACTCACACTCCTTCGCAAGCACAGAACCAGTTGTAC...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR GCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTCTAGCTGGGACCTGCTaGCCTGGGTCATCAAACTCC +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFLAGTC*PGSSNS
Trigger: GGAGTTTGATGACCCAGGGCAGCAGGTCCCAGCTAG...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTGGACTAGCTGGGACCTaGTGCCCTGGGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFGLAGT*CPGSSN
Trigger: GTTTGATGACCCAGGGCAGCAGGTCCCAGCTAGTCC...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTGATGCCCTCTTTTGTTaGTGTTTCACTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSDALFC*CFTVLT
Trigger: TGTGAGAACAGTGAAACAGCAACAAAAGAGGGCATC...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTAGGCATGAGCCACTGTaGCTGGCCTGTGACATCAGT +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFRHEPL*LACDIS
Trigger: ACTGATGTCACAGGCCAGGCACAGTGGCTCATGCCT...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACTCCAACAGTACCCACTaGCTACTTATATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYSNSTH*LLIFYN
Trigger: ATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGA...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACAATAGGACTATACTCTTaGCTTCCTTACATGATTCTC +
Preference number: 4 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTIGLYS*LPYMIL
Trigger: GAGAATCATGTAAGGAAGGCAAGAGTATAGTCCTAT...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591206.5
CDS-3UTR CCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGAAAGCTCAGTACAACTaGTTCTGTGCTTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWKAQYN*FCACEG
Trigger: TCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTT...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGTTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCTTCCTCGCCGCTTTCTaGATTATGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTFLAAF*IMLLNP
Trigger: TGGGTTCAGCAACATAATCCAGAAAGCGGCGAGGAA...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCATTCCTCGCCGCTTTCTaGATTATGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSFLAAF*IMLLNP
Trigger: TGGGTTCAGCAACATAATCCAGAAAGCGGCGAGGAA...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWMNGLD*VPVKSP
Trigger: AGGAGACTTAACAGGAACCCAGTCAAGGCCATTCAT...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTTCTCCATTTATGCGTaGTCCCATGGCCATGAATGG +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLFSIYA*SHGHEW
Trigger: CCATTCATGGCCATGGGACCACGCATAAATGGAGAA...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTTCTCCATTTATGCGTaGTCCCATGGCCATGAATGG +
Preference number: 4 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTFSIYA*SHGHEW
Trigger: CCATTCATGGCCATGGGACCACGCATAAATGGAGAA...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCATAAGGTCTCTCTTCTaGAGGAACTTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPIRSLF*RNFLTH
Trigger: ATGTGTCAGAAAGTTCCTCCAGAAGAGAGACCTTAT...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGTGCAGTGACAGAGCCTaGGTTGCTATATTCATGACA +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLCSDRA*VAIFMT
Trigger: TGTCATGAATATAGCAACCCAGGCTCTGTCACTGCA...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCTGCAATTTTCAGAATaGGTTATATTCTCACACCTT +
Preference number: 4 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYLQFSE*VIFSHL
Trigger: AAGGTGTGAGAATATAACCCATTCTGAAAATTGCAG...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCAGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASACEGV*VISSFR
Trigger: GCGGAAAGAAGAGATTACTCACACTCCTTCGCAAGC...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SPYASLFSVLKVLALPLKNSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLNSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFEVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYREVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGCTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLDWVPVKSPYASLFSVLLSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...CAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CCTCTGATCCCATCTGTGTTCTGTCTGTTTGGATATCTTGCCACTTTTCTCTGGCTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLIPSVFCLFGYLATFLWLSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...CCAGAGAAAAGTGGCAAGATATCCAAACAGACAGAACACAGATGGGATCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCATGTCTAATGAGTTTTaGGCTCTGGCTAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPMSNEF*ALAKGF
Trigger: AAAACCTTTAGCCAGAGCTCAAAACTCATTAGACAT...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATATGCTGAACAAGGGCTaGGCTCCTTTTGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNMLNKG*APFESF
Trigger: AAAACTTTCAAAAGGAGCTCAGCCCTTGTTCAGCAT...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGTTCTCCACATTCATCTaGAGTTTGGGGATCAAGACA +
Preference number: 4 (lower is better)
Translates to: SPYASLFSVLKVLALPLKFSTFI*SLGIKT
Trigger: TGTCTTGATCCCCAAACTTCAGATGAATGTGGAGAA...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp CTTCCTTACATGATTCTCCATTTGCAGCTAACTTCTAAACTGCAAATCAAACTAATCCTTCCATGGCACTaGTGGTCCCTGTGGACTAGC +
Preference number: 4 (lower is better)
Translates to: LPYMILHLQLTSKLQIKLILPWH*WSLWTS
Trigger: GCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGAT...TAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATATTAGCACTGGGAAATaGTGCACAAAGCAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNISTGK*CTKQAR
Trigger: TCTAGCTTGCTTTGTGCAGCATTTCCCAGTGCTAAT...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAGCTTCTGGTATTGATTaGCAGAGATGGTATGTATTT +
Preference number: 4 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPASGID*QRWYVF
Trigger: AAATACATACCATCTCTGGCAATCAATACCAGAAGC...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCGCCCAAGCTAGAGTaGAGTGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRSPKLE*SGVILA
Trigger: AGCCAAGATCACACCACTGCACTCTAGCTTGGGCGA...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTAAGGTGGCCATCATCTaGAAGCCAAGGAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFKVAII*KPRREK
Trigger: CTTCTCTCTCCTTGGCTTGCAGATGATGGCCACCTT...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGCGGGGTCAGCGGAACTaGGTTTTCCTTTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRRGQRN*VFLWKA
Trigger: TGCTTTCCAAAGGAAAACGCAGTTCCGCTGACCCCG...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CCA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: SPYASLFSVLKVLALPLKMSVDS*DALRHV
Trigger: AACATGTCTCAGAGCATCCCAAGAGTCAACAGACAT...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWMSVDS*DALRHV
Trigger: AACATGTCTCAGAGCATCCCAAGAGTCAACAGACAT...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATTCCACACTTTGTTTCTaGCCTTTGGCTACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNSTLCF*PLATVL
Trigger: AAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGA...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCAGAAACAAATGATATaGCAGCTTCTGATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNQKQMI*QLLIQS
Trigger: GCTCTGGATCAGAAGCTGCCATATCATTTGTTTCTG...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAAAAAATTTGCAAAAGATaGTTGGGCGCCATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKKICKR*LGAMAH
Trigger: GTGAGCCATGGCGCCCAACCATCTTTTGCAAATTTT...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCACTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASLRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TTTCTGTTGTTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAATCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLLFTTHSVVFCCGNPSKSGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...TTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAACAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp AGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTTTGGAGGTGGATGTCTGTTaGCTCTTGGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RIVRKEISVVYHPFCGILEVDVC*LLGCSE
Trigger: CTCAGAGCATCCCAAGAGTCAACAGACATCCACCTC...CAAAATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATAAAGCAAGAAATTGTTaGATGTGTAGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PYASLFSVLKVLALPLKNKARNC*MCSLSS
Trigger: GCTGCTGAGGCTACACATTCAACAATTTCTTGCTTT...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR TCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCAGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASASLAS*YALPEV
Trigger: TACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGC...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKASLAS*YALPEV
Trigger: TACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGC...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTTGGAGAGGCCCACTGTaGTATGATTGTAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFWRGPL*YDCKSH
Trigger: GTGACTCTTACAATCATATCACAGTGGGCCTCTCCA...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCTTGGCACTTATTTTGTaGTTTCCCTACTTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISLALIL*FPYLSS
Trigger: GCTACTTAAGTAGGGAAATCACAAAATAAGTGCCAA...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQIVQLVL*LRRSVS
Trigger: ACTCACACTCCTTCGCAAGCACAGAACCAGTTGTAC...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGTTCCTGAGACGAAGTaGCTCACACAGTCCACACCA +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPVPETK*LTQSTP
Trigger: TGGTGTGGACTGTGTGAGGCACTTCGTCTCAGGAAC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCAAAGCAGGAGTTTGAGTaGTGGCCTCCTCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PTALKKLYKQINMTYRSSKQEFE*WPPLSS
Trigger: GGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTT...TGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAATTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TTTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSSLVLLLPPVNSPFKSNFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...ATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKCVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAAGTGAGCCACTGTGCTTaGTCTATCTATTACATTGCT +
Preference number: 4 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKVSHCA*SIYYIA
Trigger: AGCAATGTAATAGATAGACCAAGCACAGTGGCTCAC...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCATGCACTACCACGTCTaGCAAATTCTGTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: CLLTGTSPLALLKSLARPMHYHV*QILFIF
Trigger: AAAAATAAACAGAATTTGCCAGACGTGGTAGTGCAT...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTAACAAGAAAAGAAGGTaGCCATCATCTGCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTNKKRR*PSSASQ
Trigger: TTGGCTTGCAGATGATGGCCACCTTCTTTTCTTGTT...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPACEGV*VISSFR
Trigger: GCGGAAAGAAGAGATTACTCACACTCCTTCGCAAGC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp CTTCCTTACATGATTCTCCATTTGCAGCTAACTTCTAAACTGCAAATCAAACTAGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: LPYMILHLQLTSKLQIKLACEGV*VISSFR
Trigger: GCGGAAAGAAGAGATTACTCACACTCCTTCGCAAGC...TAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591206.5
CDS-3UTR TCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGCTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRLRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTCTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRLRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGTCTGGATTATGTTGCTaGACCCAGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWSGLCC*TQICSS
Trigger: GGAGCTGCAGATCTGGGTTCAGCAACATAATCCAGA...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGGCTGACAGCAATTCATaGGGGGTGAATACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWADSNS*GVNTKP
Trigger: CGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGC...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTGACACAGACCAAACTTaGCCTGCTTTTAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFDTDQT*PAFRMA
Trigger: CGCCATCCTAAAAGCAGGTCAAGTTTGGTCTGTGTC...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR TCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQIACEGV*VISSFH
Trigger: ATGGAAAGAAGAGATTACTCACACTCCTTCGCAAGC...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR GCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRVQLVL*LRRSVS
Trigger: ACTCACACTCCTTCGCAAGCACAGAACCAGTTGTAC...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCATTTTTCTTCTGAGATaGCCTCTTTTGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISIFLLR*PLLLLF
Trigger: AAACAGCAACAAAAGAGGGCATCTCAGAAGAAAAAT...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCTGTTTGGATATCTTaGCACTTTTCTCTGGACATG +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLSVWIS*HFSLDM
Trigger: CATGTCCAGAGAAAAGTGGCAAGATATCCAAACAGA...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCAAAAGCTCAGTACAACTaGTTCTGTGCTTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASKAQYN*FCACEG
Trigger: TCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTT...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTATTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSHHISNSDSISPMSLDLFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTTCCTCGCCGCTTTCTaGATTATGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRFLAAF*IMLLNP
Trigger: TGGGTTCAGCAACATAATCCAGAAAGCGGCGAGGAA...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHPTALKKLYKQINMTYRFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTTTAAGGGCTGGAGGTaGATGTCTGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRFKGWR*MSVDSW
Trigger: CCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAA...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAATGAATGGCCTTGACTaGGTTCCTGTTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKMNGLD*VPVKSP
Trigger: AGGAGACTTAACAGGAACCCAGTCAAGGCCATTCAT...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATATTGGAACTTTCTTATaGGGAGAGAGTATACTGAAG +
Preference number: 4 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNIGTFL*GESILK
Trigger: CTTCAGTATACTCTCTCCCCATAAGAAAGTTCCAAT...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTCTGAGGTATCAGGGTTaGAATCACTCCAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: SRIVRKEISVVYHPFCGILRYQG*NHSRFH
Trigger: GTGGAATCTGGAGTGATTTCAACCCTGATACCTCAG...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQINSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFNSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ESLSPASEELMWILSQLSNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PYASLFSVLKVLALPLKNNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTTTTGTGAAGATCACTTaGCTAAAACTGCCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFFVKIT*LKLPPW
Trigger: CCAAGGGGGCAGTTTTAGTCAAGTGATCTTCACAAA...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAGATGCCCTCTTTTGTTaGTGTTTCACTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKDALFC*CFTVLT
Trigger: TGTGAGAACAGTGAAACAGCAACAAAAGAGGGCATC...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR GCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGTTAGAGAGGAATGCTaGTTGAAGCTGTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPVREEC*LKLCPH
Trigger: ATGTGGGCACAGCTTCAAGCAGCATTCCTCTCTAAC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCATGTGTTAGAGAGGAATaGTGCTTGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPCVREE*CLKLCP
Trigger: TGGGCACAGCTTCAAGCAGCATTCCTCTCTAACACA...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR GCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAAGGAAACCACATATTTaGCCTTTCCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPRKPHI*PFPGVT
Trigger: TGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCT...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACAAAGCTCAGTACAACTaGTTCTGTGCTTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYKAQYN*FCACEG
Trigger: TCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTT...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTTTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQIFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCATTCCTCGCCGCTTTCTaGATTATGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPFLAAF*IMLLNP
Trigger: TGGGTTCAGCAACATAATCCAGAAAGCGGCGAGGAA...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: HHISNSDSISPMSLDLAKMSVDS*DALRHV
Trigger: AACATGTCTCAGAGCATCCCAAGAGTCAACAGACAT...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SRIVRKEISVVYHPFCGICVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CCA 90 bp TTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FSYHLSILHSSQIKLPAICVFKG*RWMSVD
Trigger: GTCAACAGACATCCACCTCCAGCCCTTAAAGACACA...AATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGTCTGAAGAATTAATGTaGATCCTTTCACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPYASLFSVLKVLALPLKSEELM*ILSQLS
Trigger: TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGA...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTGACCTGCTTTTAGGATaGCGAGATATCGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: FPLWFFSYHLSILHSSQIDLLLG*RDIDRN
Trigger: ATTCCTATCGATATCTCGCCATCCTAAAAGCAGGTC...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
3UTR CAA 72 bp CTAACTTCTAAACTGCAAATCAAACTATGTCACTCCTaGTCCAAAATCCTTCAACTGCATCCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: LTSKLQIKLCHS*SKILQLHPTAL
Trigger: AAGTGCAGTGGGATGCAGTTGAAGGATTTTGGACAAGGAGTGACATAGTTTGATTTGCAGTTTAGAAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGACAGCCATTCTTGGCTaGAACAGCTTAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWTAILG*NSLAKS
Trigger: GCTTTTTGCTAAGCTGTTTCAGCCAAGAATGGCTGT...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TTTCTGTTGTTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAAAAAGCAAGAAATTGTTaGATGTGTAGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLFTTHSVVFCCGNPSKKARNC*MCSLSS
Trigger: GCTGCTGAGGCTACACATTCAACAATTTCTTGCTTT...TTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAACAACAGAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp TTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAACATACTATATGGCTGGCAAAGTGTTaGTGGCAAAGCAAGAAATTG +
Preference number: 4 (lower is better)
Translates to: FTTHSVVFCCGNPSKHTIWLAKC*WQSKKL
Trigger: CAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCA...TATAGTATGTTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCACTTTCACCTAGGTCATaGGGTTTAAATTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASLSPRS*GLNCWR
Trigger: TCTCCAACAATTTAAACCTCATGACCTAGGTGAAAG...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAAGAGTTTCCAGATaGTTTCCCATTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFSRVSR*FPIPHH
Trigger: GTGGTGAGGAATGGGAAATCATCTGGAAACTCTTGA...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTTCAAGAGTTTCCAGATaGTTTCCCATTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYISRVSR*FPIPHH
Trigger: GTGGTGAGGAATGGGAAATCATCTGGAAACTCTTGA...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTATTTTTCTTCTGAGATaGCCTCTTTTGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LESLSPASEELMWILSQLIFLLR*PLLLLF
Trigger: AAACAGCAACAAAAGAGGGCATCTCAGAAGAAAAAT...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR GCA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCTCCAACAGTACCCACTaGCTACTTATATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTSNSTH*LLIFYN
Trigger: ATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGA...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCCAAAATCCTTCAACTaGATCCCACTGCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYPKSFN*IPLHLR
Trigger: TCTTAAGTGCAGTGGGATGCAGTTGAAGGATTTTGG...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTAAAGCTCAGTACAACTaGTTCTGTGCTTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFKAQYN*FCACEG
Trigger: TCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTT...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTTTTGTTTCTGGCCTTTaGCTACTGTTCTTTACTGGG +
Preference number: 4 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFFVSGL*LLFFTG
Trigger: CCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAA...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CTTCCTTACATGATTCTCCATTTGCAGCTAACTTCTAAACTGCAAATCAAACTAGGTGATGCTCACATGTaGCAAGTTTGTCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LPYMILHLQLTSKLQIKLGDAHM*QVCQVQ
Trigger: TTGCACTTGACAAACTTGCCACATGTGAGCATCACC...TAGTTTGATTTGCAGTTTAGAAGTTAGCTGCAAATGGAGAATCATGTAAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TTTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTCCCACCTATTTACCTaGCTTTCTCTTACTCATAGT +
Preference number: 4 (lower is better)
Translates to: FSSLVLLLPPVNSPFKSNSHLFT*LSLTHS
Trigger: ACTATGAGTAAGAGAAAGCCAGGTAAATAGGTGGGA...ATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp TTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAACATACTATAAATTCTTGGCAGGATTaGGTACTCCCATTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: FTTHSVVFCCGNPSKHTINSWQD*VLPFCL
Trigger: TAAGCAGAATGGGAGTACTCAATCCTGCCAAGAATT...TATAGTATGTTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR TCA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCAAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AIFTTLSYKFLVGASLASNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGTCAGGAAGTGTTCCTTaGTCCTCTAAGATTGGGTTA +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWSGSVP*SSKIGL
Trigger: TAACCCAATCTTAGAGGATCAAGGAACACTTCCTGA...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR GCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTCCAAAATCCTTCAACTaGATCCCACTGCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIPKSFN*IPLHLR
Trigger: TCTTAAGTGCAGTGGGATGCAGTTGAAGGATTTTGG...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TTTACCACCCATTCTGTGGTATTTTGTTGTGGAAACCCTAGTAAACATACTATATTCCACAGCCATTCTTaGCTGAAACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: FTTHSVVFCCGNPSKHTIFHSHS*LKQLSK
Trigger: TTTGCTAAGCTGTTTCAGCCAAGAATGGCTGTGGAA...TATAGTATGTTTACTAGGGTTTCCACAACAAAATACCACAGAATGGGTGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWMSVDS*DALRHV
Trigger: AACATGTCTCAGAGCATCCCAAGAGTCAACAGACAT...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACTCCCACCTATTTACCTaGCTTTCTCTTACTCATAGT +
Preference number: 4 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYSHLFT*LSLTHS
Trigger: ACTATGAGTAAGAGAAAGCCAGGTAAATAGGTGGGA...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTTCCTATTTTCCTCTCTaGTTCTTCTCTTACCACCTG +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYISYFPL*FFSYHL
Trigger: CAGGTGGTAAGAGAAGAACCAGAGAGGAAAATAGGA...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTCAGGTCTTCATGACTTaGATCCTATTTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIQVFMT*ILFSSL
Trigger: CAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTG...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTCAGGTCTTCATGACTTaGATCCTATTTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFQVFMT*ILFSSL
Trigger: CAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTG...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
3UTR CAA 72 bp TATGATTGTAAGAGTCACCATGCCATTTTTACAACCTaGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCC +
Preference number: 4 (lower is better)
Translates to: YDCKSHHAIFTT*SYKFLVGASLA
Trigger: GGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGCATGGTGACTCTTACAATCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR TCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAGAGAAAAACAAGAGTTaGGTAGCTCTTACCACGTAT +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPEKNKS*VALTTY
Trigger: ATACGTGGTAAGAGCTACTCAACTCTTGTTTTTCTC...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR TCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTACATACAGGTCTTCATaGCTTGGATCCTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYITYRSS*LGSYFP
Trigger: AGGAAAATAGGATCCAAGTCATGAAGACCTGTATGT...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR TCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTGTTTGTCAGGACAGATaGGTAAAATTCATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIVCQDR*VKFIPH
Trigger: GTGAGGAATGAATTTTACTCATCTGTCCTGACAAAC...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR TCA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTGATCCGTATCAGTTCTaGAAAAGCTTAGAATATCCC +
Preference number: 4 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIDPYQF*KSLEYP
Trigger: GGGATATTCTAAGCTTTTTCAGAACTGATACGGATC...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR TCA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGAATTTTCTGAATTGCTaGCGAAACAATTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWNFLNC*RNNSWQ
Trigger: CTGCCAAGAATTGTTTCGTCAGCAATTCAGAAAATT...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CCA 90 bp AGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTGAAGAATTAATGTaGATCCTTTCACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SNSDSISPMSLDLAKFTRSEELM*ILSQLS
Trigger: TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGA...ACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAATGTCTTTGTGTTGCTaGTTAACCTGTACAACATTC +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPMSLCC*LTCTTF
Trigger: GAATGTTGTACAGGTTAACCAGCAACACAAAGACAT...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTTGTGTTCTGTCTGTTTaGATATCTTGCCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRIVRKEISVVYHPFCGICVLSV*ISCHFS
Trigger: AGAAAAGTGGCAAGATATCCAAACAGACAGAACACA...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
3UTR CAA 72 bp CTGGCCTGTGACATCAGTTTTAAGAGTTTCAGGATTTaGTGTACATTCATGATGGTTACTGAAACATACATT +
Preference number: 4 (lower is better)
Translates to: LACDISFKSFRI*CTFMMVTETYI
Trigger: AATGTATGTTTCAGTAACCATCATGAATGTACACAAAATCCTGAAACTCTTAAAACTGATGTCACAGGCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 72 bp TTGGGAATTTTAAGAAACCTGACAGCAGCTCTGATATaGTCTTTAGAATCAAAGGAGAATAGAGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: LGILRNLTAALI*SLESKENRVLT
Trigger: TGTTAAGACTCTATTCTCCTTTGATTCTAAAGACAATATCAGAGCTGCTGTCAGGTTTCTTAAAATTCCCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 72 bp TTCAAAGTCAAAAGGCAATGCTTAAAGCTTCTGGTATaGATTGCCAGAGATGGTATGTATTTATTCATGTCT +
Preference number: 4 (lower is better)
Translates to: FKVKRQCLKLLV*IARDGMYLFMS
Trigger: AGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTGACTTTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
3UTR CAA 72 bp TTAGTTTACAGAGTCCTCATAAAACACAATCTATACTaGAATGCAGTGAGTACACTGCACTTTGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: LVYRVLIKHNLY*NAVSTLHFDLF
Trigger: AAAAAGGTCAAAGTGCAGTGTACTCACTGCATTCAAGTATAGATTGTGTTTTATGAGGACTCTGTAAACTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR GCA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAAATATGTCTTTGTGTTaGTGGTTAACCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPNMSLC*WLTCTT
Trigger: TGTTGTACAGGTTAACCAGCAACACAAAGACATATT...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CCA 90 bp CCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCACTGCAATTTTCAGAATaGGTTATATTCTCACACCTT +
Preference number: 4 (lower is better)
Translates to: PTALKKLYKQINMTYRSSLQFSE*VIFSHL
Trigger: AAGGTGTGAGAATATAACCCATTCTGAAAATTGCAG...TGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS TCA 90 bp CTGCGTTTTCCTTTGGAAAGCAGGAGTTTGAGTGCTGGCCTCCTCTaGGTTCCCCAGTCGCTTGGAGACGCCGCGCGGGCCAAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: LRFPLESRSLSAGLL*VPQSLGDAARAKGP
Trigger: CGGCCCTTTGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTTTCCAAAGGAAAACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS CCA 90 bp CGGGAGGCGGAGCTTTCAGTGAGCCGAGATAGCGCCACTGCAGTCTaGCCTGGGCGAAAGAGTGGACTCTTGAGTTATAAGTTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: REAELSVSRDSATAV*PGRKSGLLSYKFLV
Trigger: TACAAGAAACTTATAACTCAAGAGTCCACTCTTTCGCCCAGGCCAGACTGCAGTGGCGCTATCTCGGCTCACTGAAAGCTCCGCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589420.1
CDS TCA 90 bp TCTTTAAGGGCTGGAGGTGGATGTCTGTTGACTCTTGGGATGCTCTaGGACATGTTAAATCCTTCCATGGCACTGCTGGTCCCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SLRAGGGCLLTLGML*DMLNPSMALLVPVD
Trigger: GTCCACAGGGACCAGCAGTGCCATGGAAGGATTTAACATGTCTCAGAGCATCCCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000585800.1
ENST00000588119.1
ENST00000589420.1
ENST00000591206.5
ENST00000592264.1
CDS-3UTR CAA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp GCCTTTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: AFLFVHHPPRPETSPGAYAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...GTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTGAGTTCCCCAGTCGCTaGGAGACGCCGCGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYIEFPSR*ETPRGP
Trigger: TGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTC...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CAA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp CCTGAAACCTCTCCTGGGGCCTACCACAGTACCAGACATGTATTGACGCTTTATGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: PETSPGAYHSTRHVLTLYAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...ATAAAGCGTCAATACATGTCTGGTACTGTGGTAGGCCCCAGGAGAGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCGGAATGCTCCACACTTaGTTTCTGGCCTTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: CLLTGTSPLALLKSLARPGMLHT*FLAFGY
Trigger: GTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCC...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS TCA 90 bp CAGGATGGTGGCTGGCAAAGTGTTGATGGCAAAGCAAGAAATTGTTaGATGTGTAGCCTCAGCAGCTATGATATCGCCGGGAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: QDGGWQSVDGKARNC*MCSLSSYDIAGKTS
Trigger: GGAAGTTTTCCCGGCGATATCATAGCTGCTGAGGCTACACATTCAACAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCACCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000589420.1
ENST00000591505.1
CDS-3UTR CAA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCCAACTGGTTCTGTGCTaGCGAAGGAGTGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPQLVLC*RRSVSN
Trigger: ATTACTCACACTCCTTCGCAAGCACAGAACCAGTTG...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATCTGACGAAACAATTCTaGGCAGGATTGAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYLTKQF*AGLSTP
Trigger: GGGAGTACTCAATCCTGCCAAGAATTGTTTCGTCAG...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCAGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GGTCCCATGGCCATGAATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 5 (lower is better)
Translates to: GPMAMNGLDWVPVKSPYAMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...AGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCATTCATGGCCATGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCGGGCTCAACAAATCATaGATGAAGCCATTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: CLLTGTSPLALLKSLARPGLNKS*MKPFPH
Trigger: GTGGGGAAATGGCTTCATCAATGATTTGTTGAGCCC...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACACAGGAACTTCTCCATaGGCACTGCTTAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYTGTSP*ALLKSL
Trigger: CAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGT...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp ACAGGAACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTAAGGAAACCACATATTaGCCCTTTCCCTGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: TGTQGMLHTLFLAFGYCSKETTY*PFPWGH
Trigger: GTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTT...AGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS TCA 90 bp GGACTCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCATaGTATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLLSYKFLVGASLAS*YALPEVAPEMEIWV
Trigger: CACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589420.1
CDS-3UTR CAA 90 bp TGTTTCTGGCCTTTGGCTACTGTTCTTTACTGGGGTACCACTTCCCTAGAGTACCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: CFWPLATVLYWGTTSLEYQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...GTACTCTAGGGAAGTGGTACCCCAGTAAAGAACAGTAGCCAAAGGCCAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATCTGAGATGCCCTCTTTaGTTGCTGTTTCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYLRCPL*LLFHCS
Trigger: AGAACAGTGAAACAGCAACAAAAGAGGGCATCTCAG...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR CAA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATAGAGAGGAATGCTGCTaGAAGCTGTGCCCACATACA +
Preference number: 5 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNREECC*KLCPHT
Trigger: TGTATGTGGGCACAGCTTCAAGCAGCATTCCTCTCT...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GTTGGGCAAGGAAACCACATATTTGCCCTTTCCCTGGGGTCACATAAACCAAGACAAGGGCTCCAGGTTTaGTCTATTAACAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: VGQGNHIFALSLGSHKPRQGLQV*SINRNF
Trigger: GAAGTTCCTGTTAATAGACAAAACCTGGAGCCCTTG...TCTTGGTTTATGTGACCCCAGGGAAAGGGCAAATATGTGGTTTCCTTGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp CCTAAACATGGGCATTTAGGCCTCCTGCTGTTCTTACTGGTTAGCACATGTCCATGTGAGCCACTGTGCTaGGTCTATCTATTACATTGC +
Preference number: 5 (lower is better)
Translates to: PKHGHLGLLLFLLVSTCPCEPLC*VYLLHC
Trigger: GCAATGTAATAGATAGACCAAGCACAGTGGCTCACA...TGGACATGTGCTAACCAGTAAGAACAGCAGGAGGCCTAAATGCCCATGTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS GCA 90 bp CCCCCTTGGGAAGGAGATCTTAGTTTCTCCCCTGTAGCACTTCCTTaGTTCCACACTAAATTGCTTTCATGCTCACTAATTCCTCGAAAT +
Preference number: 5 (lower is better)
Translates to: PPWEGDLSFSPVALP*FHTKLLSCSLIPRN
Trigger: ATTTCGAGGAATTAGTGAGCATGAAAGCAATTTAGTGTGGAAGCAAGGAAGTGCTACAGGGGAGAAACTAAGATCTCCTTCCCAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGCTGACGAAACAATTCTaGGCAGGATTGAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: SPYASLFSVLKVLALPLKLTKQF*AGLSTP
Trigger: GGGAGTACTCAATCCTGCCAAGAATTGTTTCGTCAG...CTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGCTGACGAAACAATTCTaGGCAGGATTGAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLLTKQF*AGLSTP
Trigger: GGGAGTACTCAATCCTGCCAAGAATTGTTTCGTCAG...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCAGATGCCCTCTTTTGTaGCTGTTTCACTGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISRCPLL*LFHCSH
Trigger: GTGAGAACAGTGAAACAGCAACAAAAGAGGGCATCT...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TATGCCTTGCCAGAAGTAGCGCCTGAGATGGAGATTTGGGTGCAGGTGATTTATATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 5 (lower is better)
Translates to: YALPEVAPEMEIWVQVIYMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...ATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATTATAGTGTGGACTCTTaGATGGCGCATAAGGACCGA +
Preference number: 5 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNYSVDS*MAHKDR
Trigger: TCGGTCCTTATGCGCCATCAAAGAGTCCACACTATA...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTGCCAAGATCGTGCCATaGCACTCCAGCCTGGACAAG +
Preference number: 5 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFAKIVP*HSSLDK
Trigger: CTTGTCCAGGCTGGAGTGCAATGGCACGATCTTGGC...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCACAACTGGTTCTGTGCTaGCGAAGGAGTGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: ESLSPASEELMWILSQLSQLVLC*RRSVSN
Trigger: ATTACTCACACTCCTTCGCAAGCACAGAACCAGTTG...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp ATGGCCTTGACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: MALTGFLLSLLMLVSFQSQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...AGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTCAAGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: LESLSPASEELMWILSQLAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp GACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCGCTTTCTGGATTATGTaGCTGAACCCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: DWVPVKSPYASLFSVLKVAFWIM*LNPDLQ
Trigger: CTGCAGATCTGGGTTCAGCAACATAATCCAGAAAGC...GACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp TATTCTTTCTTCTCATGCCTATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCTGAGATGCCCTCTTTaGTTGCTGTTTCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: YSFFSCLSNSWPALGSTNLRCPL*LLFHCS
Trigger: AGAACAGTGAAACAGCAACAAAAGAGGGCATCTCAG...ATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATAGGCATGAGAAGAAAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTGTCATGAGGTTTAAATaGTTGGAGAGGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTVMRFK*LERPTV
Trigger: CACAGTGGGCCTCTCCAACAATTTAAACCTCATGAC...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp CTTAGCAAAATTTACTCGTTCTCCATTTATGCGTGGTCCCATGGCCATGAATGGAGTGGCAGTATGTTGTaGACTCAGTCACCATATCAG +
Preference number: 5 (lower is better)
Translates to: LSKIYSFSIYAWSHGHEWSGSML*TQSPYQ
Trigger: CTGATATGGTGACTGAGTCAACAACATACTGCCACT...CCATTCATGGCCATGGGACCACGCATAAATGGAGAACGAGTAAATTTTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp AGTTCTAGGATAGCCTACAGGTTGGGCAAGGAAACCACATATTTGCCCTTTCCCACAGCAGCTCTGATATaGTCTTTAGAATCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SSRIAYRLGKETTYLPFPTAALI*SLESKE
Trigger: CTCCTTTGATTCTAAAGACAATATCAGAGCTGCTGT...GGGAAAGGGCAAATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCTAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCTTAAAGCTTCTGGTATaGATTGCCAGAGATGGTATG +
Preference number: 5 (lower is better)
Translates to: CLLTGTSPLALLKSLARPLKLLV*IARDGM
Trigger: CATACCATCTCTGGCAATCAATACCAGAAGCTTTAA...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTCA +
Preference number: 5 (lower is better)
Translates to: ESLSPASEELMWILSQLSIAEEA*GGLDNS
Trigger: TGAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTAT...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTCTCAAACTCCTGACCTaGTTATCCACCCGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: SRIVRKEISVVYHPFCGILKLLT*LSTRLG
Trigger: GCCGAGGCGGGTGGATAACAAGGTCAGGAGTTTGAG...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp TTTTATTTGTCCATCACCCACCTAGACCTGAAACCTCTCCTGGGGCCTACCACAAATAGGACTATACTCTaGCCTTCCTTACATGATTCT +
Preference number: 5 (lower is better)
Translates to: FYLSITHLDLKPLLGPTTNRTIL*PSLHDS
Trigger: AGAATCATGTAAGGAAGGCAAGAGTATAGTCCTATT...TGTGGTAGGCCCCAGGAGAGGTTTCAGGTCTAGGTGGGTGATGGACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591206.5
CDS-3UTR CAA 90 bp GACTGGGTTCCTGTTAAGTCTCCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTTA +
Preference number: 5 (lower is better)
Translates to: DWVPVKSPYASLFSVLKVIAEEA*GGLDNL
Trigger: TAAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTAT...GACTTTCAAGACTGAAAAGAGACTAGCATAAGGAGACTTAACAGGAACCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR CAA 90 bp GACTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTGTGGCTGGCAAAGTGTaGATGGCAAAGCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: DSVTISVIVTLSLQCPWTVAGKV*MAKQEI
Trigger: AATTTCTTGCTTTGCCATCAACACTTTGCCAGCCAC...AGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR CAA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATGGTGCAGGTGATTTATaGACGATGTGTTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: PYASLFSVLKVLALPLKNGAGDL*TMCSSG
Trigger: TCCTGAAGAACACATCGTCAATAAATCACCTGCACC...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTGGTGCAGGTGATTTATaGACGATGTGTTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LESLSPASEELMWILSQLGAGDL*TMCSSG
Trigger: TCCTGAAGAACACATCGTCAATAAATCACCTGCACC...AAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp GAAAGTCTTAGCCCTGCCTCTGAAGAATTAATGTGGATCCTTTCACAGCTTTCAAGTGGCAGTATGTTGTaGACTCAGTCACCATATCAG +
Preference number: 5 (lower is better)
Translates to: ESLSPASEELMWILSQLSSGSML*TQSPYQ
Trigger: CTGATATGGTGACTGAGTCAACAACATACTGCCACT...TGAAAGCTGTGAAAGGATCCACATTAATTCTTCAGAGGCAGGGCTAAGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCGTAGAGACTACAGTCTaGTTTTCCACTGTATTCCTA +
Preference number: 5 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISVETTV*FSTVFL
Trigger: TAGGAATACAGTGGAAAACAAGACTGTAGTCTCTAC...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GACTGTAGAGACTACAGTCTTGTTTTCCACTGTATTCCTAGTTCCTGGGACAAACTTTGTTTCTGGCCTTaGGCTACTGTTCTTTACTGG +
Preference number: 5 (lower is better)
Translates to: DCRDYSLVFHCIPSSWDKLCFWP*ATVLYW
Trigger: CCAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAG...TTTGTCCCAGGAACTAGGAATACAGTGGAAAACAAGACTGTAGTCTCTACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TATCTAATTCCTGGCCTGCCCTGGGCTCAACAAATCATTGATGAAGCCATTTCCGAATATGTCTTTGTGTaGCTGGTTAACCTGTACAAC +
Preference number: 5 (lower is better)
Translates to: YLIPGLPWAQQIIDEAISEYVFV*LVNLYN
Trigger: GTTGTACAGGTTAACCAGCAACACAAAGACATATTC...GGAAATGGCTTCATCAATGATTTGTTGAGCCCAGGGCAGGCCAGGAATTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TGTCTATTAACAGGAACTTCTCCATTGGCACTGCTTAAGAGTCTGGCCAGACCCGACCTATTAGGTCTTTaGAATATGTCTTTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: CLLTGTSPLALLKSLARPDLLGL*NMSLCC
Trigger: GCAACACAAAGACATATTCAAAAGACCTAATAGGTC...GGGTCTGGCCAGACTCTTAAGCAGTGCCAATGGAGAAGTTCCTGTTAATAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTCAGCCTCCCAAATACTaGGGTCTACAGGCATGCACT +
Preference number: 5 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFQPPKY*GLQACT
Trigger: AGTGCATGCCTGTAGACCCAAGTATTTGGGAGGCTG...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTTGGGGTTTCACCATATaGGCCAGGCTGTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFWGFTI*ARLFSN
Trigger: GTTTGAGAACAGCCTGGCCAATATGGTGAAACCCCA...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp CCTTATGCTAGTCTCTTTTCAGTCTTGAAAGTCTTAGCCCTGCCTCTGAAGAATATGAGGTTTAAATTGTaGGAGAGGCCCACTGTGATA +
Preference number: 5 (lower is better)
Translates to: PYASLFSVLKVLALPLKNMRFKL*ERPTVI
Trigger: TATCACAGTGGGCCTCTCCAACAATTTAAACCTCAT...ATTCTTCAGAGGCAGGGCTAAGACTTTCAAGACTGAAAAGAGACTAGCATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCACACTCTAGCAGACTCTaGAGGTATAGGCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPHSSRL*RYRLGS
Trigger: AGAGCCCAGCCTATACCTCAAGAGTCTGCTAGAGTG...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCAACTGGTTCTGTGCTaGCGAAGGAGTGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYQLVLC*RRSVSN
Trigger: ATTACTCACACTCCTTCGCAAGCACAGAACCAGTTG...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: FPLWFFSYHLSILHSSQIQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp CTGCATCCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGCTGACGAAACAATTCTaGGCAGGATTGAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: LHPTALKKLYKQINMTYRLTKQF*AGLSTP
Trigger: GGGAGTACTCAATCCTGCCAAGAATTGTTTCGTCAG...CCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGGATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp GCCATTTTTACAACCTTGAGTTATAAGTTTCTTGTAGGTGCTTCACTAGCCTCAAGATGCCCTCTTTTGTaGCTGTTTCACTGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: AIFTTLSYKFLVGASLASRCPLL*LFHCSH
Trigger: GTGAGAACAGTGAAACAGCAACAAAAGAGGGCATCT...TGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAGGTTGTAAAAATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261333.10
CDS-3UTR CAA 90 bp CACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAAGTGGCTGGCAAAGTGTaGATGGCAAAGCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: HHISNSDSISPMSLDLAKVAGKV*MAKQEI
Trigger: AATTTCTTGCTTTGCCATCAACACTTTGCCAGCCAC...TTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000355632.8
CDS-3UTR CAA 90 bp GACTCTATCTCTCCAATGTCCTTGGACTTAGCAAAATTTACTCGTTCTCCATTTAGTGGCAGTATGTTGTaGACTCAGTCACCATATCAG +
Preference number: 5 (lower is better)
Translates to: DSISPMSLDLAKFTRSPFSGSML*TQSPYQ
Trigger: CTGATATGGTGACTGAGTCAACAACATACTGCCACT...AAATGGAGAACGAGTAAATTTTGCTAAGTCCAAGGACATTGGAGAGATAGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000592264.1
CDS-3UTR CAA 90 bp ACTCAAGGAATGCTCCACACTTTGTTTCTGGCCTTTGGCTACTGTTCTTTACTGCTTTTGAATATGTCTTaGTGTTGCTGGTTAACCTGT +
Preference number: 5 (lower is better)
Translates to: TQGMLHTLFLAFGYCSLLLLNMS*CCWLTC
Trigger: ACAGGTTAACCAGCAACACAAAGACATATTCAAAAG...CAGTAAAGAACAGTAGCCAAAGGCCAGAAACAAAGTGTGGAGCATTCCTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp CTCAGTCACCATATCAGTAATAGTGACTCTATCTCTCCAATGTCCTTGGACTTACTGTGTTCTGTCTGTTaGGATATCTTGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: LSHHISNSDSISPMSLDLLCSVC*DILPLF
Trigger: GAAAAGTGGCAAGATATCCAAACAGACAGAACACAG...TAAGTCCAAGGACATTGGAGAGATAGAGTCACTATTACTGATATGGTGACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp CATACAGGTCTTCATGACTTGGATCCTATTTTCCTCTCTGGTTCTTCTCTTACCATGTATGCCCTTAGTTaGTCAGGACAGATGAGTAAA +
Preference number: 5 (lower is better)
Translates to: HTGLHDLDPIFLSGSSLTMYALS*SGQMSK
Trigger: TTTACTCATCTGTCCTGACAAACTAAGGGCATACAT...GGTAAGAGAAGAACCAGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CAA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTCAACTGGTTCTGTGCTaGCGAAGGAGTGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SRIVRKEISVVYHPFCGIQLVLC*RRSVSN
Trigger: ATTACTCACACTCCTTCGCAAGCACAGAACCAGTTG...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp TCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTCAACTGGTTCTGTGCTaGCGAAGGAGTGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SLTTCQFSIQVKLNYLQFQLVLC*RRSVSN
Trigger: ATTACTCACACTCCTTCGCAAGCACAGAACCAGTTG...AAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGCTGACGAAACAATTCTaGGCAGGATTGAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWLTKQF*AGLSTP
Trigger: GGGAGTACTCAATCCTGCCAAGAATTGTTTCGTCAG...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTGTTTGTGAAGATCACTaGACTAAAACTGCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFVCEDH*TKTAPL
Trigger: CAAGGGGGCAGTTTTAGTCAAGTGATCTTCACAAAC...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp AAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTATTCATGTCTTACCAAGGATAGCCTACAGGTaGGGCAAGGAAACCACATAT +
Preference number: 5 (lower is better)
Translates to: KASGIDCQRWYVFIHVLPRIAYR*GKETTY
Trigger: ATATGTGGTTTCCTTGCCCAACCTGTAGGCTATCCT...TGGTAAGACATGAATAAATACATACCATCTCTGGCAATCAATACCAGAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp TTTCCTCTCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTACAGGTCTTCATGACTaGGATCCTATTTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FPLWFFSYHLSILHSSQITGLHD*DPIFLS
Trigger: AGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGT...AATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACGAACTGCGTTTTCCTTaGGAAAGCAGGAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYELRFP*ESRSLS
Trigger: ACTCAAACTCCTGCTTTCCAAAGGAAAACGCAGTTC...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS-3UTR CAA 90 bp TCTAGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTCAATTCTTGGCAGGATaGAGTACTCCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SRIVRKEISVVYHPFCGIQFLAG*STPILL
Trigger: AAGCAGAATGGGAGTACTCAATCCTGCCAAGAATTG...AATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp AGATGTGCTCCAACAGTACCCACTGCCTACTTATATTCTATAATTTACTACATTACAGGTCTTCATGACTaGGATCCTATTTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RCAPTVPTAYLYSIIYYITGLHD*DPIFLS
Trigger: AGAGAGGAAAATAGGATCCAAGTCATGAAGACCTGT...AATGTAGTAAATTATAGAATATAAGTAGGCAGTGGGTACTGTTGGAGCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp TCTGGTTCTTCTCTTACCACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACAAACTATGTCACTCCTaGTCCAAAATCCTTCAACTG +
Preference number: 5 (lower is better)
Translates to: SGSSLTTCQFSIQVKLNYKLCHS*SKILQL
Trigger: CAGTTGAAGGATTTTGGACAAGGAGTGACATAGTTT...GTAGTTTAATTTGACTTGAATGGAGAATTGACAGGTGGTAAGAGAAGAACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp CAAAAGGCAATGCTTAAAGCTTCTGGTATTGATTGCCAGAGATGGTATGTATTTTGCTTCCACACTAAATaGCTTTCATGCTCACTAATT +
Preference number: 5 (lower is better)
Translates to: QKAMLKASGIDCQRWYVFCFHTK*LSCSLI
Trigger: AATTAGTGAGCATGAAAGCAATTTAGTGTGGAAGCA...AAATACATACCATCTCTGGCAATCAATACCAGAAGCTTTAAGCATTGCCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS-3UTR CAA 90 bp AGAATTGTGAGAAAAGAGATTTCTGTTGTTTACCACCCATTCTGTGGTATTTTGGAAAAGAGATTTCTGTaGTTTACCACCCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RIVRKEISVVYHPFCGILEKRFL*FTTHSV
Trigger: CACAGAATGGGTGGTAAACAACAGAAATCTCTTTTC...CAAAATACCACAGAATGGGTGGTAAACAACAGAAATCTCTTTTCTCACAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS-3UTR CAA 90 bp ACCTGTCAATTCTCCATTCAAGTCAAATTAAACTACCTGCAATTTTCAGAATGGAAACTATGTCACTCCTaGTCCAAAATCCTTCAACTG +
Preference number: 5 (lower is better)
Translates to: TCQFSIQVKLNYLQFSEWKLCHS*SKILQL
Trigger: CAGTTGAAGGATTTTGGACAAGGAGTGACATAGTTT...CCATTCTGAAAATTGCAGGTAGTTTAATTTGACTTGAATGGAGAATTGACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS-3UTR CAA 90 bp CCCACTGCACTTAAGAAACTATACAAACAAATTAACATGACATACAGGTCTTCATCACATGTGGCAAGTTaGTCAAGTGCAATTAATTCT +
Preference number: 5 (lower is better)
Translates to: PTALKKLYKQINMTYRSSSHVAS*SSAINS
Trigger: AGAATTAATTGCACTTGACAAACTTGCCACATGTGA...TGAAGACCTGTATGTCATGTTAATTTGTTTGTATAGTTTCTTAAGTGCAGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585800.1
ENST00000591206.5
CDS CCA 72 bp TTTGAGTGCTGGCCTCCTCTGAGTTCCCCAGTCGCTTaGAGACGCCGCGCGGGCCAAAGGGCCGCGACCTGG +
Preference number: 6 (lower is better)
Translates to: FECWPPLSSPVA*RRRAGQRAATW
Trigger: CCAGGTCGCGGCCCTTTGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS TCA 72 bp CCTTTGGAAAGCAGGAGTTTGAGTGCTGGCCTCCTCTaGGTTCCCCAGTCGCTTGGAGACGCCGCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: PLESRSLSAGLL*VPQSLGDAARA
Trigger: GGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTTTCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS TCA 72 bp GCTCAGTACAACTGGTTCTGTGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCGCGAAGCCCAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: AQYNWFCACEGV*VISSFREAQER
Trigger: CCGCTCCTGGGCTTCGCGGAAAGAAGAGATTACTCACACTCCTTCGCAAGCACAGAACCAGTTGTACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000589630.1
ENST00000591206.5
CDS GCA 72 bp GGAACTGCGTTTTCCTTTGGAAAGCAGGAGTTTGAGTaGTGGCCTCCTCTGAGTTCCCCAGTCGCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: GTAFSFGKQEFE*WPPLSSPVAWR
Trigger: TCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTTTCCAAAGGAAAACGCAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS CCA 72 bp GAGCTTTCAGTGAGCCGAGATAGCGCCACTGCAGTCTaGCCTGGGCGAAAGAGTGGACTCTTGAGTTATAAG +
Preference number: 6 (lower is better)
Translates to: ELSVSRDSATAV*PGRKSGLLSYK
Trigger: CTTATAACTCAAGAGTCCACTCTTTCGCCCAGGCCAGACTGCAGTGGCGCTATCTCGGCTCACTGAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589420.1
CDS TCA 72 bp GCTGGAGGTGGATGTCTGTTGACTCTTGGGATGCTCTaGGACATGTTAAATCCTTCCATGGCACTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AGGGCLLTLGML*DMLNPSMALLV
Trigger: GACCAGCAGTGCCATGGAAGGATTTAACATGTCTCAGAGCATCCCAAGAGTCAACAGACATCCACCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000585800.1
ENST00000588119.1
ENST00000589420.1
ENST00000591206.5
ENST00000592264.1
CDS TCA 72 bp GCTCAGTACAACTGGTTCTGTGCTTGCGAAGGAGTGTaGGTAATCTCTTCTTTCCCCGAGCTGCAAGCCACA +
Preference number: 6 (lower is better)
Translates to: AQYNWFCACEGV*VISSFPELQAT
Trigger: TGTGGCTTGCAGCTCGGGGAAAGAAGAGATTACTCACACTCCTTCGCAAGCACAGAACCAGTTGTACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601719.1
CDS CCA 72 bp CATGGTTTCCAGGATTTCAGCTGTGTCTTTAAGGGCTaGAGGTGGATGTCTGTTGACTCTTGGGATGCTCTG +
Preference number: 6 (lower is better)
Translates to: HGFQDFSCVFKG*RWMSVDSWDAL
Trigger: CAGAGCATCCCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAAGACACAGCTGAAATCCTGGAAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000585800.1
ENST00000588119.1
ENST00000589420.1
ENST00000591206.5
ENST00000592264.1
CDS CCA 72 bp GTCTTTAAGGGCTGGAGGTGGATGTCTGTTGACTCTTaGGATGCTCTGAGACATGTTAAATCCTTCCATGGC +
Preference number: 6 (lower is better)
Translates to: VFKGWRWMSVDS*DALRHVKSFHG
Trigger: GCCATGGAAGGATTTAACATGTCTCAGAGCATCCCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000585800.1
ENST00000588119.1
ENST00000589420.1
ENST00000591206.5
ENST00000592264.1
CDS CAA 72 bp GGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTCACTTTTAGGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: GETHSQRIAEEA*GGLDNSLLGER
Trigger: CCTTTCCCCTAAAAGTGAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355632.8
CDS CAA 72 bp GGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTCTAAGAAGCAAAAGGGA +
Preference number: 6 (lower is better)
Translates to: GETHSQRIAEEA*GGLDNSKKQKG
Trigger: TCCCTTTTGCTTCTTAGAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591505.1
CDS CAA 90 bp AAACTTCCTGGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTCTAAGAAGCAAAAGGGAAATGCTGCA +
Preference number: 6 (lower is better)
Translates to: KLPGETHSQRIAEEA*GGLDNSKKQKGNAA
Trigger: TGCAGCATTTCCCTTTTGCTTCTTAGAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCCAGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591505.1
CDS TCA 72 bp AAAACTTCCTGGAGAAACACATTCCCAACGGATAGCTaGAGAAGCTTTGGGAGGTCTGGACAACTTAATTCC +
Preference number: 6 (lower is better)
Translates to: KTSWRNTFPTDS*RSFGRSGQLNS
Trigger: GGAATTAAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCCAGGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000589420.1
CDS GCA 72 bp AACAGCTTAGCAAAAAGCTCAGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGTAATCTCTTCTTTCCG +
Preference number: 6 (lower is better)
Translates to: NSLAKSSVQLVL*LRRSVSNLFFP
Trigger: CGGAAAGAAGAGATTACTCACACTCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTTTTGCTAAGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261333.10
ENST00000330501.12
ENST00000355632.8
ENST00000589630.1
ENST00000591206.5
CDS GCA 72 bp AACAGCTTAGCAAAAAGCTCAGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGTAATCTCTTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: NSLAKSSVQLVL*LRRSVSNLFFP
Trigger: GGGAAAGAAGAGATTACTCACACTCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTTTTGCTAAGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601719.1
CDS CAA 72 bp GGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTaGGGAGGTCTGGACAACTTAATTCCTCGAAATGAA +
Preference number: 6 (lower is better)
Translates to: GETHSQRIAEEA*GGLDNLIPRNE
Trigger: TTCATTTCGAGGAATTAAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261333.10
ENST00000589420.1
CDS TCA 72 bp ACAGTATTCACAAATTACTTTATAGTGTGGACTCTTTaGTGGCGCATAAGGACCGATCTGTGCCTGAAAGCC +
Preference number: 6 (lower is better)
Translates to: TVFTNYFIVWTL*WRIRTDLCLKA
Trigger: GGCTTTCAGGCACAGATCGGTCCTTATGCGCCATCAAAGAGTCCACACTATAAAGTAATTTGTGAATACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS GCA 72 bp AACAGCTTAGCAAAAAGCTCAGTACAACTGGTTCTGTaGTTGCGAAGGAGTGTGAGTAATCTCTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: NSLAKSSVQLVL*LRRSVSNLFFP
Trigger: TGGAAAGAAGAGATTACTCACACTCCTTCGCAAGCACAGAACCAGTTGTACTGAGCTTTTTGCTAAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585800.1
CDS CAA 72 bp ACATTTTTAGATGGCAGGATGGTGGCTGGCAAAGTGTaGATGGCAAAGCAAGAAATTGTTGAATGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: TFLDGRMVAGKV*MAKQEIVECVA
Trigger: GGCTACACATTCAACAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCACCATCCTGCCATCTAAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000589420.1
ENST00000591505.1
CDS CAA 72 bp TTCTCCCCTGTAGCACTTCCTTGCTTCCACACTAAATaGCTTTCATGCTCACTAATTCCTCGAAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: FSPVALPCFHTK*LSCSLIPRNEG
Trigger: ACCTTCATTTCGAGGAATTAGTGAGCATGAAAGCAATTTAGTGTGGAAGCAAGGAAGTGCTACAGGGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS CAA 72 bp CACAGTATTCACAAATTACTTTATAGTGTGGACTCTTaGATGGCGCATAAGGACCGATCTGTGCCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: HSIHKLLYSVDS*MAHKDRSVPES
Trigger: GCTTTCAGGCACAGATCGGTCCTTATGCGCCATCAAAGAGTCCACACTATAAAGTAATTTGTGAATACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330501.12
CDS CAA 90 bp TTTCTATTCACATTTTTAGATGGCAGGATGGTGGCTGGCAAAGTGTaGATGGCAAAGCAAGAAATTGTTGAATGTGTAGCCTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: FLFTFLDGRMVAGKV*MAKQEIVECVASAA
Trigger: AGCTGCTGAGGCTACACATTCAACAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCACCATCCTGCCATCTAAAAATGTGAATAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261333.10
ENST00000355632.8
ENST00000589420.1
ENST00000591505.1
CDS CAA 72 bp GATGGCGAGATATCGATAGGAATGTATGCCCTTAGTTaGTCAGGACAGATGAGTAAAATTCATTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: DGEISIGMYALS*SGQMSKIHSSH
Trigger: GTGTGAGGAATGAATTTTACTCATCTGTCCTGACAAACTAAGGGCATACATTCCTATCGATATCTCGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585800.1