Pregenerated sensors for ZNF396 (Homo sapiens)
Ensembl gene IDs: ENSG00000186496Ensembl transcript IDs: ENST00000306346.5, ENST00000585522.1, ENST00000586585.1, ENST00000586687.5, ENST00000587422.1, ENST00000589332.7
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGGAAATGATGATGAGGATCAGTGGTCTCTGGGCTGTGTACCTTaGGGTCCCACAGAAAGGCCTCAAGGGCTGCCTGAAGATAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: IGNDDEDQWSLGCVP*GPTERPQGLPEDKR Trigger: CCTTTTATCTTCAGGCAGCCCTTGAGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATCATTTCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| 3UTR TCA 90 bp | TTGATGGCAGCACCAAGTGAAGATGGGTGCTTCCTTCAAAATACTTaGTTTAGATTCTGCCATCTTATTCACATAGAACCTAAGAAACTC | + |
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Preference number: 1 (lower is better) Translates to: LMAAPSEDGCFLQNT*FRFCHLIHIEPKKL Trigger: GAGTTTCTTAGGTTCTATGTGAATAAGATGGCAGAATCTAAATCAAGTATTTTGAAGGAAGCACCCATCTTCACTTGGTGCTGCCATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306346.5 ENST00000589332.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGGGAGTAGAGAAGTGTATTCAAAGCACGTATGAGAGCAAAGTCACCTTACTGGGCTGTGTACCTTaGGGTCCCACAGAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: CEGVEKCIQSTYESKVTLLGCVP*GPTERP Trigger: AGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAG...TAAGGTGACTTTGCTCTCATACGTGCTTTGAATACACTTCTCTACTCCCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAATAGATTGCTACACAGCTATTCTGGAGCACTTATAGAAAGCAATGCAAAGAGGATCAGTGGTCTCTaGGCTGTGTACCTTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KNRLLHSYSGALIESNAKRISGL*AVYLGV Trigger: GACCCCAAGGTACACAGCCCAGAGACCACTGATCCT...CTTTGCATTGCTTTCTATAAGTGCTCCAGAATAGCTGTGTAGCAATCTATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGTACTAAGGAGCGTTTaGATCTGGTGTCTTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: ISRKANNADLRSSTFSPVVLRSV*IWCLPL Trigger: CAAGGGAAGACACCAGATGCAAACGCTCCTTAGTAC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGTCTTGAAAGGAGACTaGTGCTTACTAAGACCACTG | + |
|
Preference number: 2 (lower is better) Translates to: ISRKANNADLRSSTFSPVVLKGD*CLLRPL Trigger: CAGTGGTCTTAGTAAGCACCAGTCTCCTTTCAAGAC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGATGGAGGCTCTTGTGTaGTTTCATAAGATAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ISRKANNADLRSSTFSPVMEALV*FHKIRP Trigger: AGGCCTTATCTTATGAAAGCACACAAGAGCCTCCAT...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTTGAAAGGAGACTGGTaGTTACTAAGACCACTGATT | + |
|
Preference number: 2 (lower is better) Translates to: ISRKANNADLRSSTFSPVLKGDW*LLRPLI Trigger: AATCAGTGGTCTTAGTAAGCACCAGTCTCCTTTCAA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR CAA 90 bp | TCTGAATTAAGCTTTGGAATTGCAAACGTCAGAATTGAGACTGCATaGATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: SELSFGIANVRIETA*ISRKANNADLRSST Trigger: GGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTATCAATGCAGTCTCAATTCTGACGTTTGCAATTCCAAAGCTTAATTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTTGATATTAATAGTATaGAGGCTCTTGTGTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ISRKANNADLRSSTFSPVLILIV*RLLCAF Trigger: GAAAGCACACAAGAGCCTCCATACTATTAATATCAA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR CCA 72 bp | CTGAGCAGTTATATAGGAAATGATGATGAGGATCAGTaGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: LSSYIGNDDEDQ*SLGCVPWGPTE Trigger: TTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATCATTTCCTATATAACTGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| 3UTR-3UTR CAA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGTACTAAGGAGCGTTaGCATCTGGTGTCTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISRKANNADLRSSTFSPVCTKER*HLVSSL Trigger: AAGGGAAGACACCAGATGCAAACGCTCCTTAGTACA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| 3UTR-3UTR CAA 90 bp | TATCTGCAATGGAAGAATAGATTGCTACACAGCTATTCTGGAGCACTTATAGAACAATGCAAAGAGCAGTaGAGGCCAGTTGAAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: YLQWKNRLLHSYSGALIEQCKEQ*RPVEDV Trigger: CACATCTTCAACTGGCCTCAACTGCTCTTTGCATTG...TTCTATAAGTGCTCCAGAATAGCTGTGTAGCAATCTATTCTTCCATTGCAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| 3UTR TCA 72 bp | TTATATGTGTTAATAATGAAAATAGTAGAACATGTCTaGGAATGCCTTTTCAAGGCCTGCATAGGGATGGAA | + |
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Preference number: 3 (lower is better) Translates to: LYVLIMKIVEHV*ECLFKACIGME Trigger: TTCCATCCCTATGCAGGCCTTGAAAAGGCATTCTCAGACATGTTCTACTATTTTCATTATTAACACATATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | GATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAAGGCCTCAAGGGCGGGGAACTGCCAGCTaGGCAACAACTTCCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DQWSLGCVPWGPTERPQGRGTAS*ATTSGS Trigger: AGAACCGGAAGTTGTTGCGCAGCTGGCAGTTCCCCG...CCCTTGAGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATGATGATGAGGATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAACTGAGATGTGTGTGGTaGGCAGAGGGCCCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: MMMRISGLWAVYLGVPQKLRCVW*AEGPHT Trigger: GGTGTGGGGGCCCTCTGCTCACCACACACATCTCAG...TTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | ATGATGATGAGGATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAACTGGCGGAAGGTCTCTaGGCTGTAGCTGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MMMRISGLWAVYLGVPQKLAEGL*AVAAAP Trigger: TGGAGCAGCAGCTACAGCCCAGAGACCTTCCGCCAG...TTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | GATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAAGGCCTCAAGGGGATGATGAGGATCAGTaGTCTCTGGGCTGTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: DQWSLGCVPWGPTERPQGDDEDQ*SLGCVP Trigger: AGGTACACAGCCCAGAGACCACTGATCCTCATCATC...CCCTTGAGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | TATAGGCGATTCTGCTACGAGATCCCACCAGTAACTGAGCAGTTATATAGGAAAGAGGTGAAGCTGTCCTaGTGGACACTCCTCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: YRRFCYEIPPVTEQLYRKEVKLS*WTLLPT Trigger: CGTCGGGAGGAGTGTCCATCAGGACAGCTTCACCTC...TTTCCTATATAACTGCTCAGTTACTGGTGGGATCTCGTAGCAGAATCGCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGAGGTGAAGCTGTCCTaGTGGACACTCCTCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVEVKLS*WTLLPT Trigger: CGTCGGGAGGAGTGTCCATCAGGACAGCTTCACCTC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCTGGCGGAAGGTCTCTaGGCTGTAGCTGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVLAEGL*AVAAAP Trigger: TGGAGCAGCAGCTACAGCCCAGAGACCTTCCGCCAG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CCA 90 bp | GATGATGAGGATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAAGGGCTACACAGCTATTCTaGAGCACTTATAGAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: DDEDQWSLGCVPWGPTERATQLF*STYRKQ Trigger: TTGCTTTCTATAAGTGCTCCAGAATAGCTGTGTAGC...CCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | TGTGAGGGAGTAGAGAAGTGTATTCAAAGCACGTATGAGAGCAAAGTCACCTTAGGTAGCCAAACTGCCTaGATTGCTGGCGGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CEGVEKCIQSTYESKVTLGSQTA*IAGGRS Trigger: AGACCTTCCGCCAGCAATTCAGGCAGTTTGGCTACC...TAAGGTGACTTTGCTCTCATACGTGCTTTGAATACACTTCTCTACTCCCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCGGGGAACTGCCAGCTaGGCAACAACTTCCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVRGTAS*ATTSGS Trigger: AGAACCGGAAGTTGTTGCGCAGCTGGCAGTTCCCCG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | TATAGGCGATTCTGCTACGAGATCCCACCAGTAACTGAGCAGTTATATAGGAAAGAGAAACCGGGGAACTaGCAGCTGCGCAACAACTTC | + |
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Preference number: 4 (lower is better) Translates to: YRRFCYEIPPVTEQLYRKEKPGN*QLRNNF Trigger: GAAGTTGTTGCGCAGCTGGCAGTTCCCCGGTTTCTC...TTTCCTATATAACTGCTCAGTTACTGGTGGGATCTCGTAGCAGAATCGCCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGGTAGCCAAACTGCCTaGATTGCTGGCGGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVGSQTA*IAGGRS Trigger: AGACCTTCCGCCAGCAATTCAGGCAGTTTGGCTACC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGAGAAACCGGGGAACTaGCAGCTGCGCAACAACTTC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVEKPGN*QLRNNF Trigger: GAAGTTGTTGCGCAGCTGGCAGTTCCCCGGTTTCTC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CCA 90 bp | TGTGAGGGAGTAGAGAAGTGTATTCAAAGCACGTATGAGAGCAAAGTCACCTTAGTGGAGGCTAGAGTCTaGATCACAGGTCTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CEGVEKCIQSTYESKVTLVEARV*ITGLLF Trigger: GAAGAGCAGACCTGTGATCCAGACTCTAGCCTCCAC...TAAGGTGACTTTGCTCTCATACGTGCTTTGAATACACTTCTCTACTCCCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGAATTGCGCTTCGGCTaGATGCCTTTGCACACTCGT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVELRFG*MPLHTR Trigger: ACGAGTGTGCAAAGGCATTCAGCCGAAGCGCAATTC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGGGTTCGTCGATGCTaGATCAGAATTGCGCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVWVRRC*IRIALR Trigger: CCGAAGCGCAATTCTGATTCAGCATCGACGAACCCA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGATGGCAGCACCAAGTaGAGATGGGTGCTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVDGSTK*RWVLPS Trigger: TGAAGGAAGCACCCATCTTCACTTGGTGCTGCCATC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGTCCAGGCTGGTCTTaGACTCCTGAGTTCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVCPGWS*TPEFRQ Trigger: TTGCCTGAACTCAGGAGTTCAAGACCAGCCTGGACA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGCGCTTCGGCTGAATaGCTTTGCACACTCGTCACA | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVCASAE*LCTLVT Trigger: TGTGACGAGTGTGCAAAGGCATTCAGCCGAAGCGCA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | ACAAATAACAGAAGTTCCCACAGTAAGGAGGAGATGAGAGGGGGAGATTTGAGGCAATATAGGCGATTCTaGTACGAGATCCCACCAGTA | + |
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Preference number: 4 (lower is better) Translates to: TNNRSSHSKEEMRGGDLRQYRRF*YEIPPV Trigger: TACTGGTGGGATCTCGTAGCAGAATCGCCTATATTG...CCTCAAATCTCCCCCTCTCATCTCCTCCTTACTGTGGGAACTTCTGTTATTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGTGGAGGCTAGAGTCTaGATCACAGGTCTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVVEARV*ITGLLF Trigger: GAAGAGCAGACCTGTGATCCAGACTCTAGCCTCCAC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCTCCTGTGGCTTTCATaGGTCTTGAAAGGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVLLWLS*VLKGDW Trigger: CCAGTCTCCTTTCAAGACTCATGAAAGCCACAGGAG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | AAGAATAGATTGCTACACAGCTATTCTGGAGCACTTATAGAAAGCAATGCAAAGCCACACCTTCCAACATaGACTGAATCCTGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KNRLLHSYSGALIESNAKPHLPT*TESCPL Trigger: GAGGGGGCAGGATTCAGTTCATGTTGGAAGGTGTGG...CTTTGCATTGCTTTCTATAAGTGCTCCAGAATAGCTGTGTAGCAATCTATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR GCA 90 bp | TATAGGCGATTCTGCTACGAGATCCCACCAGTAACTGAGCAGTTATATAGGAAAAAAGGCCTCAAGGGCTaGCTGAAGATAAAAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: YRRFCYEIPPVTEQLYRKKGLKG*LKIKGL Trigger: TAGCCCTTTTATCTTCAGGCAGCCCTTGAGGCCTTT...TTTCCTATATAACTGCTCAGTTACTGGTGGGATCTCGTAGCAGAATCGCCTATA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | AGGCATGAAAACCCTGATGCAGATGTCAGGGATTTAAAGTCTGAAGATTTTATAAGGATCAGTGGTCTCTaGGCTGTGTACCTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RHENPDADVRDLKSEDFIRISGL*AVYLGV Trigger: GACCCCAAGGTACACAGCCCAGAGACCACTGATCCT...TATAAAATCTTCAGACTTTAAATCCCTGACATCTGCATCAGGGTTTTCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGGCTTTCATGAGTCTTaGAAGGAGACTGGTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVGFHES*KETGAY Trigger: GTAAGCACCAGTCTCCTTTCAAGACTCATGAAAGCC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | TATCTGCAATGGAAGAATAGATTGCTACACAGCTATTCTGGAGCACTTATAGAACCTTCCAACATGAACTaGATCCTGCCCCCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: YLQWKNRLLHSYSGALIEPSNMN*ILPPHH Trigger: ATGGTGAGGGGGCAGGATTCAGTTCATGTTGGAAGG...TTCTATAAGTGCTCCAGAATAGCTGTGTAGCAATCTATTCTTCCATTGCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCAGAAAAGGGGACACTaGAAGTATTGTCATCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVQKRGH*KYCHQQ Trigger: CTGCTGATGACAATACTTTCAGTGTCCCCTTTTCTG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGATGCTGAATCAGAATTaGGCTTCGGCTGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVMLNQN*ASAECL Trigger: AAGGCATTCAGCCGAAGCGCAATTCTGATTCAGCAT...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CCA 90 bp | AAGAATAGATTGCTACACAGCTATTCTGGAGCACTTATAGAAAGCAATGCAAAGTTCACGGGCATGAGCTaGCTACTTGGCAATTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KNRLLHSYSGALIESNAKFTGMS*LLGNSS Trigger: TGAGGAATTGCCAAGTAGCCAGCTCATGCCCGTGAA...CTTTGCATTGCTTTCTATAAGTGCTCCAGAATAGCTGTGTAGCAATCTATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCAAATAATGCTGACCTaGGATCTTCAACCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVQIMLT*DLQPSL Trigger: GAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGCAAACGTCAGAATTaGGACTGCATTGATAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVCKRQN*DCIDKQ Trigger: CTGCTTATCAATGCAGTCTCAATTCTGACGTTTGCA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGATAGTAGAACATGTCTaGGAATGCCTTTTCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVIVEHV*ECLFKA Trigger: GGCCTTGAAAAGGCATTCTCAGACATGTTCTACTAT...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGATTACAGGTACACGTTaGCATGCCTGGCTAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVITGTR*HAWLIF Trigger: AAAAATTAGCCAGGCATGGCAACGTGTACCTGTAAT...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR GCA 90 bp | TGTGAGGGAGTAGAGAAGTGTATTCAAAGCACGTATGAGAGCAAAGTCACCTTAAATGGAAGAATAGATTaGTACACAGCTATTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CEGVEKCIQSTYESKVTLNGRID*YTAILE Trigger: CTCCAGAATAGCTGTGTAGCAATCTATTCTTCCATT...TAAGGTGACTTTGCTCTCATACGTGCTTTGAATACACTTCTCTACTCCCTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGTAATTCCACATATTTaGAGCTCCTCTAAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVVIPHI*SSSKPV Trigger: AACTGGCTTAGAGGAGCTCCAAATATGTGGAATTAC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGCAAAGAAGTTTACTATaGGTCTCTTCCCTTATTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVQRSLL*VSSLIP Trigger: TGGAATAAGGGAAGAGACTCATAGTAAACTTCTTTG...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGATAGGGATGGAAATCTaGATTAAGCTTTGGAATTGC | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVIGMEI*IKLWNC Trigger: GCAATTCCAAAGCTTAATTCAGATTTCCATCCCTAT...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR TCA 90 bp | AGGCATGAAAACCCTGATGCAGATGTCAGGGATTTAAAGTCTGAAGATTTTATATATTCAAAGCACGTATaGGAGCAAAGTCACCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: RHENPDADVRDLKSEDFIYSKHV*EQSHLS Trigger: GCTAAGGTGACTTTGCTCTCATACGTGCTTTGAATA...TATAAAATCTTCAGACTTTAAATCCCTGACATCTGCATCAGGGTTTTCATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGTTGTTTCAATAGATaGTTTGTTCCTCTCCGTAAT | + |
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Preference number: 4 (lower is better) Translates to: ISRKANNADLRSSTFSPVCCFNR*FVPLRN Trigger: ATTACGGAGAGGAACAAACCATCTATTGAAACAACA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS TCA 90 bp | GGGAGATTTGAGGCCTCTTGCATAAATCAGCTGAGATGTGTGTGGTaGGCAGAGGGCCCCCACACCTTCCAACATGAACTGAATCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GRFEASCINQLRCVW*AEGPHTFQHELNPA Trigger: GGCAGGATTCAGTTCATGTTGGAAGGTGTGGGGGCCCTCTGCTCACCACACACATCTCAGCTGATTTATGCAAGAGGCCTCAAATCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000586585.1 ENST00000586687.5 |
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| CDS TCA 90 bp | GAATACAGTTTGAGAGCTCTACTCCCAATGATGTGCCAGTGCTCTTaGCTCAGCCTGGGGGTTCATCTCCACAGGCATCCTTCTTACCTG | + |
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Preference number: 5 (lower is better) Translates to: EYSLRALLPMMCQCS*LSLGVHLHRHPSYL Trigger: CAGGTAAGAAGGATGCCTGTGGAGATGAACCCCCAGGCTGAGTCAAGAGCACTGGCACATCATTGGGAGTAGAGCTCTCAAACTGTATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 90 bp | GCTTTGAGGTTGATCACTTCTGTAGTCACCACCACACCAAGCTGCTaGGGCTGGGATGGTCTCCCTCCCTTTCCTGACGGAAAATACTTT | + |
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Preference number: 5 (lower is better) Translates to: ALRLITSVVTTTPSC*GWDGLPPFPDGKYF Trigger: AAAGTATTTTCCGTCAGGAAAGGGAGGGAGACCATCCCAGCCTCAGCAGCTTGGTGTGGTGGTGACTACAGAAGTGATCAACCTCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS-3UTR CAA 90 bp | GAAAGGCCTCAAGGGCTGCCTGAAGATAAAAGGGCTACTTTAAAAAGGCATGAATCTGGGCTGTGTACCTaGGGGTCCCACAGAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ERPQGLPEDKRATLKRHESGLCT*GSHRKA Trigger: GGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGA...TTCATGCCTTTTTAAAGTAGCCCTTTTATCTTCAGGCAGCCCTTGAGGCCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CAA 90 bp | GATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAAGGCCTCAAGGGCAATGGAAGAATAGATaGCTACACAGCTATTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: DQWSLGCVPWGPTERPQGQWKNR*LHSYSG Trigger: TCCAGAATAGCTGTGTAGCAATCTATTCTTCCATTG...CCCTTGAGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CAA 90 bp | GATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAAGGCCTCAAGGGCCCCATAGCACTTATTaGTTTAGTATCTGCAATGGA | + |
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Preference number: 5 (lower is better) Translates to: DQWSLGCVPWGPTERPQGPHSTY*FSICNG Trigger: TCCATTGCAGATACTAAACAAATAAGTGCTATGGGG...CCCTTGAGGCCTTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS-3UTR CAA 90 bp | ATGATGATGAGGATCAGTGGTCTCTGGGCTGTGTACCTTGGGGTCCCACAGAAACAATGCAAAGAGCAGTaGAGGCCAGTTGAAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: MMMRISGLWAVYLGVPQKQCKEQ*RPVEDV Trigger: CACATCTTCAACTGGCCTCAACTGCTCTTTGCATTG...TTTCTGTGGGACCCCAAGGTACACAGCCCAGAGACCACTGATCCTCATCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586687.5 |
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| CDS TCA 90 bp | CTGGGACACCCATTAGTACTTTCACCCCTATACATCCAGTTGTGCTaGGTGGGAATACAGTTTGAGAGCTCTACTCCCAATGATGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LGHPLVLSPLYIQLC*VGIQFESSTPNDVP Trigger: TGGCACATCATTGGGAGTAGAGCTCTCAAACTGTATTCCCACTCAGCACAACTGGATGTATAGGGGTGAAAGTACTAATGGGTGTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CCA 90 bp | AAAAATGTAGGAAAGGCCTCCATGAGGACATTCACAGGTAGGATGTaGTTCTTGCCACACCTGGCTTTGAGGTTGATCACTTCTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KNVGKASMRTFTGRM*FLPHLALRLITSVV Trigger: GACTACAGAAGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACCTGTGAATGTCCTCATGGAGGCCTTTCCTACATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS-3UTR CAA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGATTACAGGTACACGTaGCCATGCCTGGCTAATTTT | + |
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Preference number: 5 (lower is better) Translates to: ISRKANNADLRSSTFSPVDYRYT*PCLANF Trigger: AAAATTAGCCAGGCATGGCAACGTGTACCTGTAATC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CAA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTGCAATCTTACAAAGTaGATGGCAGCACCAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ISRKANNADLRSSTFSPVCNLTK*MAAPSE Trigger: TTCACTTGGTGCTGCCATCAACTTTGTAAGATTGCA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS TCA 90 bp | AAATCATGTTGTGGCCTTAAGAAATGGTTCTATTATTCTATCAAGTaGTTCTGGTTCTCTCTGCCTTGTACTGCAAGATCCTGGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: KSCCGLKKWFYYSIK*FWFSLPCTARSWTC Trigger: ACAGGTCCAGGATCTTGCAGTACAAGGCAGAGAGAACCAGAATCACTTGATAGAATAATAGAACCATTTCTTAAGGCCACAACATGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CCA 90 bp | GAAAAGACTTTCACTTTTCTAAGTATACCAAGACAATTTCTAGACTaGAGGTATTACGTGTCCCAGTATAAGCCTTCAGAGAGCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: EKTFTFLSIPRQFLD*RYYVSQYKPSESQY Trigger: GTACTGGCTCTCTGAAGGCTTATACTGGGACACGTAATACCTCCAGTCTAGAAATTGTCTTGGTATACTTAGAAAAGTGAAAGTCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS-3UTR CAA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGTTCAAACCTACCATCTaGTTCATAGGTTCCTCTATA | + |
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Preference number: 5 (lower is better) Translates to: ISRKANNADLRSSTFSPVFKPTI*FIGSSI Trigger: TATAGAGGAACCTATGAACAAGATGGTAGGTTTGAA...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS-3UTR CAA 90 bp | ATAAGCAGAAAAGCAAATAATGCTGACCTGAGATCTTCAACCTTCTCTCCTGTGGTTTCAATAGATGGTTaGTTCCTCTCCGTAATTACA | + |
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Preference number: 5 (lower is better) Translates to: ISRKANNADLRSSTFSPVVSIDG*FLSVIT Trigger: TGTAATTACGGAGAGGAACAAACCATCTATTGAAAC...CACAGGAGAGAAGGTTGAAGATCTCAGGTCAGCATTATTTGCTTTTCTGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589332.7 |
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| CDS TCA 90 bp | TTTGTGTTAGGAGTGATGATGACTTTCCCAATTTTGCAGACATTTTaGCAGACAAATAGCTCAGTACTGTTAGGCTTTAATCCTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: FVLGVMMTFPILQTF*QTNSSVLLGFNPQG Trigger: TCCTTGAGGATTAAAGCCTAACAGTACTGAGCTATTTGTCTGTCAAAATGTCTGCAAAATTGGGAAAGTCATCATCACTCCTAACACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000306346.5 ENST00000585522.1 ENST00000586585.1 ENST00000586687.5 ENST00000587422.1 ENST00000589332.7 |
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| CDS TCA 90 bp | GTCATTACTATCAAAATCCTGGCATCAATTAGTACTTTACAGTACTaGGACCAAGATCATCTCCCAGAAGCTTTCATAAGACATGACTCA | + |
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Preference number: 5 (lower is better) Translates to: VITIKILASISTLQY*DQDHLPEAFIRHDS Trigger: TGAGTCATGTCTTATGAAAGCTTCTGGGAGATGATCTTGGTCTCAGTACTGTAAAGTACTAATTGATGCCAGGATTTTGATAGTAATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 72 bp | GGTGAGCAGAGGGCCCCCACACCTTCCAACATGAACTaGATCCTGCCCCCTCACCATGTGGTCTTAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: GEQRAPTPSNMN*ILPPHHVVLRT Trigger: AGTCCTTAAGACCACATGGTGAGGGGGCAGGATTCAGTTCATGTTGGAAGGTGTGGGGGCCCTCTGCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000586585.1 ENST00000586687.5 |
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| CDS TCA 72 bp | CTTGAGCCACCACGCCAGGCCCAGAAACCATGCTTTTaGAGAATACTTCTCCCGACGCCGTCGGGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LEPPRQAQKPCF*RILLPTPSGRN Trigger: GTTTCTCCCCGACGGCGTCGGGAGAAGTATTCTTCAAAAGCATGGTTTCTGGGCCTGGCGTGGTGGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587422.1 |
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| CDS TCA 72 bp | TTGATCACTTCTGTAGTCACCACCACACCAAGCTGCTaGGGCTGGGATGGTCTCCCTCCCTTTCCTGACGGA | + |
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Preference number: 6 (lower is better) Translates to: LITSVVTTTPSC*GWDGLPPFPDG Trigger: TCCGTCAGGAAAGGGAGGGAGACCATCCCAGCCTCAGCAGCTTGGTGTGGTGGTGACTACAGAAGTGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 72 bp | GAGGCCTCTTGCATAAATCAGCTGAGATGTGTGTGGTaGGCAGAGGGCCCCCACACCTTCCAACATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: EASCINQLRCVW*AEGPHTFQHEL Trigger: CAGTTCATGTTGGAAGGTGTGGGGGCCCTCTGCTCACCACACACATCTCAGCTGATTTATGCAAGAGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000586585.1 ENST00000586687.5 |
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| CDS CAA 72 bp | TTTGAGAGCTCTACTCCCAATGATGTGCCAGTGCTCTaGACTCAGCCTGGGGGTTCATCTCCACAGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: FESSTPNDVPVL*TQPGGSSPQAS Trigger: GGATGCCTGTGGAGATGAACCCCCAGGCTGAGTCAAGAGCACTGGCACATCATTGGGAGTAGAGCTCTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 72 bp | GGTAGGATGTGGTTCTTGCCACACCTGGCTTTGAGGTaGATCACTTCTGTAGTCACCACCACACCAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GRMWFLPHLALR*ITSVVTTTPSC Trigger: GCAGCTTGGTGTGGTGGTGACTACAGAAGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 90 bp | GGAATACAGTTTGAGAGCTCTACTCCCAATGATGTGCCAGTGCTCTaGACTCAGCCTGGGGGTTCATCTCCACAGGCATCCTTCTTACCT | + |
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Preference number: 6 (lower is better) Translates to: GIQFESSTPNDVPVL*TQPGGSSPQASFLP Trigger: AGGTAAGAAGGATGCCTGTGGAGATGAACCCCCAGGCTGAGTCAAGAGCACTGGCACATCATTGGGAGTAGAGCTCTCAAACTGTATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 90 bp | GTAGGAAAGGCCTCCATGAGGACATTCACAGGTAGGATGTGGTTCTaGCCACACCTGGCTTTGAGGTTGATCACTTCTGTAGTCACCACC | + |
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Preference number: 6 (lower is better) Translates to: VGKASMRTFTGRMWF*PHLALRLITSVVTT Trigger: GGTGGTGACTACAGAAGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACCTGTGAATGTCCTCATGGAGGCCTTTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CCA 72 bp | GGAAAGGCCTCCATGAGGACATTCACAGGTAGGATGTaGTTCTTGCCACACCTGGCTTTGAGGTTGATCACT | + |
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Preference number: 6 (lower is better) Translates to: GKASMRTFTGRM*FLPHLALRLIT Trigger: AGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACCTGTGAATGTCCTCATGGAGGCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 72 bp | TTCACAGGTAGGATGTGGTTCTTGCCACACCTGGCTTaGAGGTTGATCACTTCTGTAGTCACCACCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: FTGRMWFLPHLA*RLITSVVTTTP Trigger: TGGTGTGGTGGTGACTACAGAAGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACCTGTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 72 bp | GCCTCCATGAGGACATTCACAGGTAGGATGTGGTTCTaGCCACACCTGGCTTTGAGGTTGATCACTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASMRTFTGRMWF*PHLALRLITSV Trigger: TACAGAAGTGATCAACCTCAAAGCCAGGTGTGGCAAGAACCACATCCTACCTGTGAATGTCCTCATGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS CAA 72 bp | CCCTATACATCCAGTTGTGCTGAGTGGGAATACAGTTaGAGAGCTCTACTCCCAATGATGTGCCAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PYTSSCAEWEYS*RALLPMMCQCS Trigger: AGAGCACTGGCACATCATTGGGAGTAGAGCTCTCAAACTGTATTCCCACTCAGCACAACTGGATGTATAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 72 bp | CCATTAGTACTTTCACCCCTATACATCCAGTTGTGCTaGGTGGGAATACAGTTTGAGAGCTCTACTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PLVLSPLYIQLC*VGIQFESSTPN Trigger: ATTGGGAGTAGAGCTCTCAAACTGTATTCCCACTCAGCACAACTGGATGTATAGGGGTGAAAGTACTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 72 bp | TTCCCTCTTAATCTCTGGCTCCTATTTTATCCAGGATaGTCATCTAGAAGGAGGGTCTCTGCTCAAATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FPLNLWLLFYPG*SSRRRVSAQMS Trigger: CGACATTTGAGCAGAGACCCTCCTTCTAGATGATCATCCTGGATAAAATAGGAGCCAGAGATTAAGAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS GCA 72 bp | GGTTCTATTATTCTATCAAGTGATTCTGGTTCTCTCTaGCTTGTACTGCAAGATCCTGGACCTGTTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: GSIILSSDSGSL*LVLQDPGPVAF Trigger: GAATGCAACAGGTCCAGGATCTTGCAGTACAAGGCAGAGAGAACCAGAATCACTTGATAGAATAATAGAACC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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| CDS TCA 72 bp | ATCAAAATCCTGGCATCAATTAGTACTTTACAGTACTaGGACCAAGATCATCTCCCAGAAGCTTTCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: IKILASISTLQY*DQDHLPEAFIR Trigger: TCTTATGAAAGCTTCTGGGAGATGATCTTGGTCTCAGTACTGTAAAGTACTAATTGATGCCAGGATTTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586585.1 |
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