RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF385D (Homo sapiens)

Ensembl gene IDs: ENSG00000151789

Ensembl transcript IDs: ENST00000281523.8, ENST00000446749.1, ENST00000466511.1, ENST00000467140.1, ENST00000469927.5, ENST00000478967.5, ENST00000494108.2, ENST00000494118.5, ENST00000495739.1, ENST00000497570.1

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RPGRTADCSGAISAH*KLRFPGSRHSPASA
Trigger: GGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp CTGTGTTCACTGTTCTGTGATGCTCGATCTTGTGCCCAGATCCCTTaGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATTT +
Preference number: 1 (lower is better)
Translates to: LCSLFCDARSCAQIP*PQGFFANIQYFHTF
Trigger: AAATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGGCACAAGATCGAGCATCACAGAACAGTGAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp AGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAGAGCT +
Preference number: 1 (lower is better)
Translates to: SCHNTAFADFHSCRR*YCWCPCSTVCFVRA
Trigger: AGCTCTGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR TCA 90 bp AGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTTTTTCCCAGATGGT +
Preference number: 1 (lower is better)
Translates to: SCHNTAFADFHSCRR*YCWCPCSTVFFPDG
Trigger: ACCATCTGGGAAAAAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 90 bp ACAGTAATGCCTTGTGACCCAGGACACTGTGTATCCCATAGGCCCTaGTTTTTAGTGGACTGGCTCATTCACTTTGGTGAAAATGGGAAA +
Preference number: 1 (lower is better)
Translates to: TVMPCDPGHCVSHRP*FLVDWLIHFGENGK
Trigger: TTTCCCATTTTCACCAAAGTGAATGAGCCAGTCCACTAAAAATCAGGGCCTATGGGATACACAGTGTCCTGGGTCACAAGGCATTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp ATACAGTACCTCCCCAATGACTGTTTCCCATTTGTCTGGACGATCTaGTTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: IQYLPNDCFPFVWTI*LRCNNAFSRGIWLL
Trigger: CAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATCGTCCAGACAAATGGGAAACAGTCATTGGGGAGGTACTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp CGCAGCCTGGCTATCAGAATTAAATCTCAACTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCGGTGGGGAAGAGGAACCCCGAATGT +
Preference number: 1 (lower is better)
Translates to: RSLAIRIKSQLANVA*YDLLSSVGKRNPEC
Trigger: ACATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATAGCCAGGCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR GCA 90 bp GGGACAAAGTCTACAATAGACTCTGGCTACTCTAAGGCTCCTCATTaGTTTTCCCACCACTTCATGCGGCTTTTGGGTGAACAAAGTTAT +
Preference number: 1 (lower is better)
Translates to: GTKSTIDSGYSKAPH*FSHHFMRLLGEQSY
Trigger: ATAACTTTGTTCACCCAAAAGCCGCATGAAGTGGTGGGAAAAGCAATGAGGAGCCTTAGAGTAGCCAGAGTCTATTGTAGACTTTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp GATAAAGATGGAACAGGCAAGTTTGATGCCAAGGTGGCATCACTGTaGCTGACCAATGATTCGGAATCTCACATTGGTGTGACTAGTGAT +
Preference number: 1 (lower is better)
Translates to: DKDGTGKFDAKVASL*LTNDSESHIGVTSD
Trigger: ATCACTAGTCACACCAATGTGAGATTCCGAATCATTGGTCAGCCACAGTGATGCCACCTTGGCATCAAACTTGCCTGTTCCATCTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp GGTTTCCTCTTGATTCTTTATACCTCTCCAAGGGTTACAACACTTTaGGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTT +
Preference number: 1 (lower is better)
Translates to: GFLLILYTSPRVTTL*EQFQEGHTQSFPIF
Trigger: AAATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTTGGAGAGGTATAAAGAATCAAGAGGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp ATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCATTCTaGGCGTTTTGGCTTCTGGTACTCAAGTCAGACTTCCAGATACAT +
Preference number: 1 (lower is better)
Translates to: IYRTHGPLRWHKLAF*AFWLLVLKSDFQIH
Trigger: ATGTATCTGGAAGTCTGACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp TCACTGGACACCCTGATACCACTCTCAGAAATACCATGTAGGCAATaGAGACCTACCATTAGAAATGATCCATTTCACTTCCTGATAGTA +
Preference number: 1 (lower is better)
Translates to: SLDTLIPLSEIPCRQ*RPTIRNDPFHFLIV
Trigger: TACTATCAGGAAGTGAAATGGATCATTTCTAATGGTAGGTCTCCATTGCCTACATGGTATTTCTGAGAGTGGTATCAGGGTGTCCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp TGTAATTGCCTGTTTTCTCATAAGAGAAATACAGTACCTCCCCAATaGCTGTTTCCCATTTGTCTGGACGATCTGATTGAGGTGCAACAA +
Preference number: 1 (lower is better)
Translates to: CNCLFSHKRNTVPPQ*LFPICLDDLIEVQQ
Trigger: TTGTTGCACCTCAATCAGATCGTCCAGACAAATGGGAAACAGTCATTGGGGAGGTACTGTATTTCTCTTATGAGAAAACAGGCAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp GTCACAGAGGCTTCAGAAGGTCTAGATACCACTACAAATCAATGCTaGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTA +
Preference number: 1 (lower is better)
Translates to: VTEASEGLDTTTNQC*RSLLKQSAFKRNAL
Trigger: TAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCAGCATTGATTTGTAGTGGTATCTAGACCTTCTGAAGCCTCTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp AGTACCGTCTTTTTCCCAGATGGTGAATCTCAAAAGGGCACTATCTaGAATATGGTAAGCTCCTCAATAAAGTACTTATTATGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: STVFFPDGESQKGTI*NMVSSSIKYLLCGW
Trigger: CCAGCCACATAATAAGTACTTTATTGAGGAGCTTACCATATTCCAGATAGTGCCCTTTTGAGATTCACCATCTGGGAAAAAGACGGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 90 bp AGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCCCTTGACATCTaGACATTGATGACCCAACCAGAGAATTCTTTAAACTCTGTGACT +
Preference number: 1 (lower is better)
Translates to: REDPQIEGNVQSLDI*TLMTQPENSLNSVT
Trigger: AGTCACAGAGTTTAAAGAATTCTCTGGTTGGGTCATCAATGTTCAGATGTCAAGGGACTGAACATTACCTTCAATTTGAGGGTCTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp CACAGCACTATTGTTTTACAAGACATCTACTGTATCTACTTTTGTTaGGATAAATACCCAGTAATTGCCGTCATAGCAAGAGGACCAGCA +
Preference number: 1 (lower is better)
Translates to: HSTIVLQDIYCIYFC*DKYPVIAVIARGPA
Trigger: TGCTGGTCCTCTTGCTATGACGGCAATTACTGGGTATTTATCCCAACAAAAGTAGATACAGTAGATGTCTTGTAAAACAATAGTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 90 bp ACTCTAAGGCTCCTCATTGCTTTTCCCACCACTTCATGCGGCTTTTaGGTGAACAAAGTTATTAATACAATGTCATCCATGCTTATGTAT +
Preference number: 1 (lower is better)
Translates to: TLRLLIAFPTTSCGF*VNKVINTMSSMLMY
Trigger: ATACATAAGCATGGATGACATTGTATTAATAACTTTGTTCACCCAAAAGCCGCATGAAGTGGTGGGAAAAGCAATGAGGAGCCTTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 90 bp AAGGCTCTCTCTGCTAATTTTCCGTTGTCTTGTTATACCATGTCCTaGACACTACCTGGATTTGAGGAAGATTTTATAAGCATTCAAAGT +
Preference number: 1 (lower is better)
Translates to: KALSANFPLSCYTMS*TLPGFEEDFISIQS
Trigger: ACTTTGAATGCTTATAAAATCTTCCTCAAATCCAGGTAGTGTGCAGGACATGGTATAACAAGACAACGGAAAATTAGCAGAGAGAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp TCCACAAACCAAGCGAAGAATAAGGACATGAACAGACCAATGTCTTaGCACCACTGGCAATATTACATTTACCTGGACAATTTTGATATT +
Preference number: 1 (lower is better)
Translates to: STNQAKNKDMNRPMS*HHWQYYIYLDNFDI
Trigger: AATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGTGTCAAGACATTGGTCTGTTCATGTCCTTATTCTTCGCTTGGTTTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 90 bp TATTTGTTTCAAATGAATCAGAGCTGCTTTCTCTATCACTTTCCTTaGCATGGTGTGATGCATGGGAAGGAATGTAAAACCATAAAGTCA +
Preference number: 1 (lower is better)
Translates to: YLFQMNQSCFLYHFP*HGVMHGKECKTIKS
Trigger: TGACTTTATGGTTTTACATTCCTTCCCATGCATCACACCATGGCAAGGAAAGTGATAGAGAAAGCAGCTCTGATTCATTTGAAACAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 90 bp TTTAGTGAGACTGCTTTAATTAACACTAAGTTATCTAACAGAAAGTaGGGCTGTATCAGTTGTAAAGGTTGTTGGATAGGGACTCAGGAT +
Preference number: 1 (lower is better)
Translates to: FSETALINTKLSNRK*GCISCKGCWIGTQD
Trigger: ATCCTGAGTCCCTATCCAACAACCTTTACAACTGATACAGCCTCACTTTCTGTTAGATAACTTAGTGTTAATTAAAGCAGTCTCACTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 90 bp GTAATTGGTGATATTTATTGCTCATGTCTACTATGTGTTGGTTTGTaGCTTAGAAACTCAAATAGGCACAGCCTCTTTGATTCTATTTTG +
Preference number: 1 (lower is better)
Translates to: VIGDIYCSCLLCVGL*LRNSNRHSLFDSIL
Trigger: CAAAATAGAATCAAAGAGGCTGTGCCTATTTGAGTTTCTAAGGCACAAACCAACACATAGTAGACATGAGCAATAAATATCACCAATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 90 bp TTACACTCAGGATGGAAAGGAATACAGAATATTTTTCTGGACATATaGAAGTATGTGAGTAGCTGCATTGGTCACTCGAATAAAGAATTT +
Preference number: 1 (lower is better)
Translates to: LHSGWKGIQNIFLDI*KYVSSCIGHSNKEF
Trigger: AAATTCTTTATTCGAGTGACCAATGCAGCTACTCACATACTTGCATATGTCCAGAAAAATATTCTGTATTCCTTTCCATCCTGAGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 90 bp TGGGCCGCAGCCTGGCTATCAGAATTAAATCTCAACTGGCAAATGTaGCATGATATGATTTGCTTTCTTCGGTGGGGAAGAGGAACCCCG +
Preference number: 2 (lower is better)
Translates to: WAAAWLSELNLNWQM*HDMICFLRWGRGTP
Trigger: CGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATAGCCAGGCTGCGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATACAGTACCTCCCCAATaGCTGTTTCCCATTTGTCTG +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHTVPPQ*LFPICL
Trigger: CAGACAAATGGGAAACAGTCATTGGGGAGGTACTGT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTGTGTTCACTGTTCTGTaGTGCTCGATCTTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: TWAIKVAQISILSVLASGVFTVL*CSILCP
Trigger: TGGGCACAAGATCGAGCATCACAGAACAGTGAACAC...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATTTTCCCACCACTTCATaGGGCTTTTGGGTGAACAAA +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHFPTTS*GFWVNK
Trigger: TTTGTTCACCCAAAAGCCGCATGAAGTGGTGGGAAA...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGGTATCCCATAGGCCCTaGTTTTTAGTGGACTGGCTC +
Preference number: 2 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMVSHRP*FLVDWL
Trigger: GAGCCAGTCCACTAAAAATCAGGGCCTATGGGATAC...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGACAGTAATGCCTTGTaGCCCAGGACACTGTGTATC +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTDSNAL*PRTLCI
Trigger: GATACACAGTGTCCTGGGTCACAAGGCATTACTGTC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGGTTCCATAGCGAAGTaGGGCAGAAGGGATCCAGGT +
Preference number: 2 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSGSIAK*GRRDPG
Trigger: ACCTGGATCCCTTCTGCCTCACTTCGCTATGGAACC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTAGTACTCTTCAAAGTTaGGGTCCAGTGAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: TWAIKVAQISILSVLASGSTLQS*GPVRGA
Trigger: TGCTCCTCTCACTGGACCTCAACTTTGAAGAGTACT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATATGAGTTTCCATCACTaGGAAGAGGAAAGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHMSFHH*EEERED
Trigger: GTCTTCTCTTTCCTCTTCTCAGTGATGGAAACTCAT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTAAATGTTGCATGATATaGTTTGCTTTCTTCGGTGGG +
Preference number: 2 (lower is better)
Translates to: CGFPQLSSLILLVSLQYRKCCMI*FAFFGG
Trigger: CCCACCGAAGAAAGCAAATCATATCATGCAACATTT...ACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR GCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATTGTTATACCATGTCCTaGACACTACCTGGATTTGAG +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHCYTMS*TLPGFE
Trigger: CTCAAATCCAGGTAGTGTGCAGGACATGGTATAACA...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTCAAATGAGGCAGGGGTaGTATAAATTGCCAAAAGCC +
Preference number: 2 (lower is better)
Translates to: TWAIKVAQISILSVLASGQMRQG*YKLPKA
Trigger: GGCTTTTGGCAATTTATATCACCCCTGCCTCATTTG...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCGGCTCAAGGGTAGTCTaGGAAGTTCAACTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: ITLLLRISTVVVVDIAGVGSRVV*EVQLSV
Trigger: GACACTAAGTTGAACTTCTCAGACTACCCTTGAGCC...GACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR-3UTR TCA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCCTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCG +
Preference number: 2 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCLANVA*YDLLSS
Trigger: CGAAGAAAGCAAATCATATCATGCAACATTTGCCAG...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR GCA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTTGCATGATATGATTTaGTTTCTTCGGTGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQLHDMI*FLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAA...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR CCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATCTGATGGAGAAAATATaGCTGATTCGTTTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHLMEKI*LIRLFP
Trigger: TGGGAACAAACGAATCAGCCATATTTTCTCCATCAG...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCATTTGCTTTCTTCGGTaGGGAAGAGGAACCCCGAAT +
Preference number: 2 (lower is better)
Translates to: ITLLLRISTVVVVDIAGVICFLR*GRGTPN
Trigger: ATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAAT...GACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATCAAATGGTTTCCTCTTaGTTCTTTATACCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHQMVSS*FFIPLQ
Trigger: TTGGAGAGGTATAAAGAATCAAGAGGAAACCATTTG...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATCTCAAAGTCAGTAGCTaGTGTGAAATGATACAATTG +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHLKVSS*CEMIQL
Trigger: CAATTGTATCATTTCACATCAGCTACTGACTTTGAG...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGCAGAGGGAAATAGGTaGCCAAAAGCACAGTCACAG +
Preference number: 2 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSAEGNR*PKAQSQ
Trigger: CTGTGACTGTGCTTTTGGGCACCTATTTCCCTCTGC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATATTTTTCTGGACATATaGAAGTATGTGAGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHIFLDI*KYVSSC
Trigger: GCAGCTACTCACATACTTGCATATGTCCAGAAAAAT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp TCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTCGCATGGATCTTTCATaGCCCAGTCCATTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SVVITLLLRISTVVVVDIRMDLS*PSPLLG
Trigger: TCCCAACAATGGACTGGGGCATGAAAGATCCATGCG...AATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR-3UTR GCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTTTTCATGGCTTCCAGTaGTTTGAGCTTCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: VITLLLRISTVVVVDIAGFHGFQ*FELLGM
Trigger: CATGCCAAGAAGCTCAAAGCACTGGAAGCCATGAAA...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR-3UTR GCA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCTATTGCTGGTGTCCCTaGAGTACCGTCTTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: LEVISVVITLLLRISTVVYCWCP*STVFFP
Trigger: TGGGAAAAAGACGGTACTGCAGGGACACCAGCAATA...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR-3UTR CCA 90 bp ATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCTCTTTGCGCTGTCCTTaGCAGTTACAGATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: ITLLLRISTVVVVDIAGVSLRCP*QLQISA
Trigger: AGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGA...GACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR-3UTR CCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTTCTTTGCGCTGTCCTTaGCAGTTACAGATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: VITLLLRISTVVVVDIAGSLRCP*QLQISA
Trigger: AGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGA...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR CAA 90 bp TGGTTTCCTCTTGATTCTTTATACCTCTCCAAGGGTTACAACACTTaGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATT +
Preference number: 2 (lower is better)
Translates to: WFPLDSLYLSKGYNT*RAVSGRPHPILPYI
Trigger: AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTTGGAGAGGTATAAAGAATCAAGAGGAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTACAACCCTACTGGTATaGTATAAAGGGGATACTGCA +
Preference number: 2 (lower is better)
Translates to: YNTLRAVSGRPHPILPYITTLLV*YKGDTA
Trigger: TGCAGTATCCCCTTTATATCATACCAGTAGGGTTGT...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTAGGGTTACAACACTTTaGGAGCAGTTTCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSRVTTL*EQFQEG
Trigger: GCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCAATCTGGGTTTCCAATaGAGGCTCTCTCTGCTAATT +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTNLGFQ*RLSLLI
Trigger: AATTAGCAGAGAGAGCCTTCATTGGAAACCCAGATT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAATGCAACAGACTGGCTaGATCAAACCCCACCATTTT +
Preference number: 2 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGMQQTG*IKPHHF
Trigger: AAAATGGTGGGGTTTGATGCAGCCAGTCTGTTGCAT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAGGGCAACTATCCACCTaGCTGAACTACCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAGQLST*LNYQGL
Trigger: CAGACCCTGGTAGTTCAGCCAGGTGGATAGTTGCCC...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTAAAATGGTTAGAAGCTaGTCACATGGGATACAGACA +
Preference number: 2 (lower is better)
Translates to: TWAIKVAQISILSVLASGKMVRS*SHGIQT
Trigger: TGTCTGTATCCCATGTGACCAGCTTCTAACCATTTT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 90 bp ATACAATCTGGGTTTCCAATGAAGGCTCTCTCTGCTAATTTTCCGTaGTCTTGTTATACCATGTCCTGCACACTACCTGGATTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: IQSGFPMKALSANFP*SCYTMSCTLPGFEE
Trigger: TTCCTCAAATCCAGGTAGTGTGCAGGACATGGTATAACAAGACAACGGAAAATTAGCAGAGAGAGCCTTCATTGGAAACCCAGATTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 90 bp AACACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTaGGCTTCTGGTACTCAAGTCAGACTTCCAGATACATTGATAAAG +
Preference number: 2 (lower is better)
Translates to: NTWAIKVAQISILSV*ASGTQVRLPDTLIK
Trigger: CTTTATCAATGTATCTGGAAGTCTGACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGAACTATCCACCTGGCTaGACTACCAGGGTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKRENYPPG*TTRVCR
Trigger: CCTACAGACCCTGGTAGTTCAGCCAGGTGGATAGTT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTTCTGGTTGAGCATATaGATGACCTACAATATGGCT +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTFWLSI*MTYNMA
Trigger: AGCCATATTGTAGGTCATTCATATGCTCAACCAGAA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTGTGTTAAGTTGGGTTaGCAAACGTCCAATAAAACC +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTCVKLG*QTSNKT
Trigger: GGTTTTATTGGACGTTTGTCAACCCAACTTAACACA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTGTAGGGTGAGAAATTaGTGTTTGGGGAGATGTTAT +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTCRVRN*CLGRCY
Trigger: ATAACATCTCCCCAAACATCAATTTCTCACCCTACA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp TTTTCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCTTTCATGGCTTCCAGTaGTTTGAGCTTCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: FSTLEVISVVITLLLRISFHGFQ*FELLGM
Trigger: CATGCCAAGAAGCTCAAAGCACTGGAAGCCATGAAA...GGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCAGTTGTAAAGGTTGTTaGATAGGGACTCAGGATGAT +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTSCKGC*IGTQDD
Trigger: ATCATCCTGAGTCCCTATCCAACAACCTTTACAACT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATCAGTCCCTTGACATCTaGACATTGATGACCCAACCA +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYQSLDI*TLMTQP
Trigger: TGGTTGGGTCATCAATGTTCAGATGTCAAGGGACTG...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTGGCATCACTGTGGCTaGCCAATGATTCGGAATCTC +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREWHHCG*PMIRNL
Trigger: GAGATTCCGAATCATTGGTCAGCCACAGTGATGCCA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTATTAATGCAACAGACTaGCTGCATCAAACCCCACCA +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPINATD*LHQTPP
Trigger: TGGTGGGGTTTGATGCAGCCAGTCTGTTGCATTAAT...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGCCATTTAAACAAAAATaGTTCCATAGCGAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMPFKQK*FHSEVR
Trigger: CCTCACTTCGCTATGGAACCATTTTTGTTTAAATGG...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGTATTGGTAAATATATaGAGTGTGGGGGAAACAACT +
Preference number: 2 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTVLVNI*SVGETT
Trigger: AGTTGTTTCCCCCACACTCCATATATTTACCAATAC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAGGGACCCCTTCCTATTaGAGAGAGAAAGTGCAACAA +
Preference number: 2 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAGTPSY*REKVQQ
Trigger: TTGTTGCACTTTCTCTCTTCAATAGGAAGGGGTCCC...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTACAAGAGCGCATAACTaGTATACTTGTCTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPTRAHN*YTCLWK
Trigger: CTTCCACAGACAAGTATATCAGTTATGCGCTCTTGT...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTTTCCAGAGTAGAACCTaGCTTTTGTCACCATTCACA +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPFQSRT*LLSPFT
Trigger: TGTGAATGGTGACAAAAGGCAGGTTCTACTCTGGAA...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGAAGAAACAACCCTACTaGTATGATATAAAGGGGATA +
Preference number: 2 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMKKQPY*YDIKGI
Trigger: TATCCCCTTTATATCATACCAGTAGGGTTGTTTCTT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 90 bp ATAAATAGTCATGAGACGTGTTCTGTGAGTCACTACAATTCTCACTaGGCACTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTC +
Preference number: 2 (lower is better)
Translates to: INSHETCSVSHYNSH*ALGTVVLYRFTITL
Trigger: GAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAGTGCCAAGTGAGAATTGTAGTGACTCACAGAACACGTCTCATGACTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCCCTAGTGGCATAGATTaGGACACAGCACTATTGTTT +
Preference number: 2 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISPSGID*DTALLF
Trigger: AAACAATAGTGCTGTGTCTCAATCTATGCCACTAGG...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCTGGACGATCTGATTaGGGTGCAACAATGCTTTTT +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSGRSD*GATMLF
Trigger: AAAAAGCATTGTTGCACCTCAATCAGATCGTCCAGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTTTGTCTGGACGATCTaGTTGAGGTGCAACAATGCT +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREFVWTI*LRCNNA
Trigger: AGCATTGTTGCACCTCAATCAGATCGTCCAGACAAA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATACATATGCAAGTATGTaGGTAGCTGCATTGGTCACT +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYTYASM*VAALVT
Trigger: AGTGACCAATGCAGCTACTCACATACTTGCATATGT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATAACAGACCAATGTCTTaGCACCACTGGCAATATTAC +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYNRPMS*HHWQYY
Trigger: GTAATATTGCCAGTGGTGTCAAGACATTGGTCTGTT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 90 bp CTTGACACCACTGGCAATATTACATTTACCTGGACAATTTTGATATaGTCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LDTTGNITFTWTILI*SKREDIMAKDVPRA
Trigger: AGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGTGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGGGGCAAGGCATTAGTTaGCTATTTAAGTTACCCTGT +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREGQGIS*LFKLPC
Trigger: ACAGGGTAACTTAAATAGTCAACTAATGCCTTGCCC...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTAAGTATGTGAGTAGCTaGATTGGTCACTCGAATAAA +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPKYVSS*IGHSNK
Trigger: TTTATTCGAGTGACCAATGCAGCTACTCACATACTT...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATAACACTCATGATGCATaGGTTTCTCTGCTTTCAGAT +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYNTHDA*VSLLSD
Trigger: ATCTGAAAGCAGAGAAACCCATGCATCATGAGTGTT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTAGAGATGCTGGTAAATaGAAAATCACCAGATACTTT +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPRDAGK*KITRYF
Trigger: AAAGTATCTGGTGATTTTGCATTTACCAGCATCTCT...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGAGGCATTTGGCTTCTaGAATGCATTTATATTTGTT +
Preference number: 2 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPEAFGF*NAFIFV
Trigger: AACAAATATAAATGCATTGCAGAAGCCAAATGCCTC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTTTCTACCAGAATACTaGTGGAACACATTATCTTCC +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREFLPEY*WNTLSS
Trigger: GGAAGATAATGTGTTCCATCAGTATTCTGGTAGAAA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCACTATGTGTTGGTTTGTaGCTTAGAAACTCAAATAGG +
Preference number: 2 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALCVGL*LRNSNR
Trigger: CCTATTTGAGTTTCTAAGGCACAAACCAACACATAG...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAAGGAATGCTTTAATTTaGAGAAAATACCACTCCCTC +
Preference number: 2 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHARNALI*RKYHSL
Trigger: GAGGGAGTGGTATTTTCTCCAAATTAAAGCATTCCT...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGATTTCACAACTCCACTaGAGAAATAATTGTCGAGTG +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREISQLH*RNNCRV
Trigger: CACTCGACAATTATTTCTCCAGTGGAGTTGTGAAAT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGCACCAAGCACGCTATaGTGTTTCTTAAATATAAAA +
Preference number: 2 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYAPSTL*CFLNIK
Trigger: TTTTATATTTAAGAAACACCATAGCGTGCTTGGTGC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCACTTCATGCGGCTTTTaGGTGAACAAAGTTATTAAT +
Preference number: 2 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISTSCGF*VNKVIN
Trigger: ATTAATAACTTTGTTCACCCAAAAGCCGCATGAAGT...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGCAATGTGTGTTAAGTTaGGTTGACAAACGTCCAATA +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREQCVLS*VDKRPI
Trigger: TATTGGACGTTTGTCAACCCAACTTAACACACATTG...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGCACTATCAAAAGTCCTaGCTCTTCAGATATACTTTA +
Preference number: 2 (lower is better)
Translates to: TTGNITFTWTILILSKREHYQKS*LFRYTL
Trigger: TAAAGTATATCTGAAGAGCCAGGACTTTTGATAGTG...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCACTGAGATTTCTTATATaGCTGATGGAGAAAATATGG +
Preference number: 2 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALRFLI*LMEKIW
Trigger: CCATATTTTCTCCATCAGCCATATAAGAAATCTCAG...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTTGCCCCAGTCCATTGTaGGGAGGCTCCAGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLICPSPL*GGSSVF
Trigger: AAACACACTGGAGCCTCCCAACAATGGACTGGGGCA...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR-3UTR CAA 90 bp TCGGTCTCAGTAGAAGGACATGAGCTATTGCCAGTGGCTGTCGTTGGGCTTTTTTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTAC +
Preference number: 3 (lower is better)
Translates to: SVSVEGHELLPVAVVGLFLSSLI*LVSLQY
Trigger: GTACTGCAGGGACACCAGCAATATCAACGACGACAA...AAAAAGCCCAACGACAGCCACTGGCAATAGCTCATGTCCTTCTACTGAGACCGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR CCA 72 bp CTGTTCTGTGATGCTCGATCTTGTGCCCAGATCCCTTaGCCACAAGGCTTTTTCGCCAATATCCAGTACTTC +
Preference number: 3 (lower is better)
Translates to: LFCDARSCAQIP*PQGFFANIQYF
Trigger: GAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGGCACAAGATCGAGCATCACAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 72 bp GGAACAGGCAAGTTTGATGCCAAGGTGGCATCACTGTaGCTGACCAATGATTCGGAATCTCACATTGGTGTG +
Preference number: 3 (lower is better)
Translates to: GTGKFDAKVASL*LTNDSESHIGV
Trigger: CACACCAATGTGAGATTCCGAATCATTGGTCAGCCACAGTGATGCCACCTTGGCATCAAACTTGCCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp CCTTGTGACCCAGGACACTGTGTATCCCATAGGCCCTaGTTTTTAGTGGACTGGCTCATTCACTTTGGTGAA +
Preference number: 3 (lower is better)
Translates to: PCDPGHCVSHRP*FLVDWLIHFGE
Trigger: TTCACCAAAGTGAATGAGCCAGTCCACTAAAAATCAGGGCCTATGGGATACACAGTGTCCTGGGTCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTTCATGCCCCAGTCCATaGTTGGGAGGCTCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: SVVITLLLRISTVVVVDISCPSP*LGGSSV
Trigger: CACACTGGAGCCTCCCAACAATGGACTGGGGCATGA...AATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR-3UTR CAA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTAGTGCTTTGAGCTTCTaGGCATGTTTCGTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPSALSF*ACFVPL
Trigger: CAAAGGCACGAAACATGCCAAGAAGCTCAAAGCACT...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR-3UTR CAA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTaGTCAGAGCTGGTATTGATG +
Preference number: 3 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPAVPSV*SELVLM
Trigger: CATCAATACCAGCTCTGACAAAACAGACGGTACTGC...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR-3UTR CAA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTAAGTACTCTTCAAAGTaGAGGTCCAGTGAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: TWAIKVAQISILSVLASGKYSSK*RSSERS
Trigger: GCTCCTCTCACTGGACCTCAACTTTGAAGAGTACTT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCCGGGACCCCTTCCTATaGAAGAGAGAAAGTGCAACA +
Preference number: 3 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTRDPFL*KRESAT
Trigger: TGTTGCACTTTCTCTCTTCAATAGGAAGGGGTCCCG...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp ATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCGTCTTTGCGCTGTCCTaGGCAGTTACAGATTTCTGC +
Preference number: 3 (lower is better)
Translates to: ITLLLRISTVVVVDIAGVVFALS*AVTDFC
Trigger: GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGAC...GACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR-3UTR CAA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCCCACAGTTGTCGTCGTaGATATTGCTGGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LEVISVVITLLLRISTVVPQLSS*ILLVSL
Trigger: CAGGGACACCAGCAATATCAACGACGACAACTGTGG...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR TCA 72 bp AACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: NTAFADFHSCRR*YCWCPCSTVCF
Trigger: AAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR TCA 72 bp CTGGTGTCCCTGCAGTACCGTCTTTTTCCCAGATGGTaGATCTCAAAAGGGCACTATCTGGAATATGGTAAG +
Preference number: 3 (lower is better)
Translates to: LVSLQYRLFPRW*ISKGHYLEYGK
Trigger: CTTACCATATTCCAGATAGTGCCCTTTTGAGATTCACCATCTGGGAAAAAGACGGTACTGCAGGGACACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 72 bp AACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: NTAFADFHSCRR*YCWCPCSTVFF
Trigger: GAAAAAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR GCA 72 bp TCTACAATAGACTCTGGCTACTCTAAGGCTCCTCATTaGTTTTCCCACCACTTCATGCGGCTTTTGGGTGAA +
Preference number: 3 (lower is better)
Translates to: STIDSGYSKAPH*FSHHFMRLLGE
Trigger: TTCACCCAAAAGCCGCATGAAGTGGTGGGAAAAGCAATGAGGAGCCTTAGAGTAGCCAGAGTCTATTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGCTCAACTGGCAAATGTaGCATGATATGATTTGCTTT +
Preference number: 3 (lower is better)
Translates to: LRISTVVVVDIAGVPAVPLNWQM*HDMICF
Trigger: AAAGCAAATCATATCATGCAACATTTGCCAGTTGAG...CGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 72 bp CTCCCCAATGACTGTTTCCCATTTGTCTGGACGATCTaGTTGAGGTGCAACAATGCTTTTTCCAGAGGCATT +
Preference number: 3 (lower is better)
Translates to: LPNDCFPFVWTI*LRCNNAFSRGI
Trigger: AATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATCGTCCAGACAAATGGGAAACAGTCATTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp ACACATGGGCCATTAAGGTGGCACAAATTAGCATTCTaGGCGTTTTGGCTTCTGGTACTCAAGTCAGACTTC +
Preference number: 3 (lower is better)
Translates to: THGPLRWHKLAF*AFWLLVLKSDF
Trigger: GAAGTCTGACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp CCCATTTGTCTGGACGATCTGATTGAGGTGCAACAATaGTTTTTCCAGAGGCATTTGGCTTCTGCAATGCAT +
Preference number: 3 (lower is better)
Translates to: PICLDDLIEVQQ*FFQRHLASAMH
Trigger: ATGCATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATCGTCCAGACAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCAGTGCTTTGAGCTTCTaGGCATGTTTCGTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: LEVISVVITLLLRISTVVSALSF*ACFVPL
Trigger: CAAAGGCACGAAACATGCCAAGAAGCTCAAAGCACT...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR TCA 72 bp TTGATTCTTTATACCTCTCCAAGGGTTACAACACTTTaGGAGCAGTTTCAGGAAGGCCACACCCAATCCTTC +
Preference number: 3 (lower is better)
Translates to: LILYTSPRVTTL*EQFQEGHTQSF
Trigger: GAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTTGGAGAGGTATAAAGAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp CAAATGAATCAGAGCTGCTTTCTCTATCACTTTCCTTaGCATGGTGTGATGCATGGGAAGGAATGTAAAACC +
Preference number: 3 (lower is better)
Translates to: QMNQSCFLYHFP*HGVMHGKECKT
Trigger: GGTTTTACATTCCTTCCCATGCATCACACCATGGCAAGGAAAGTGATAGAGAAAGCAGCTCTGATTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAAAACCATGTTTAATGTaGAGCACCAAGCACGCTATG +
Preference number: 3 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGKPCLM*STKHAM
Trigger: CATAGCGTGCTTGGTGCTCAACATTAAACATGGTTT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGCAACTACTCCAATATaGGTGAAATGTACATTCTGG +
Preference number: 3 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTATTPI*VKCTFW
Trigger: CCAGAATGTACATTTCACCAATATTGGAGTAGTTGC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCTTGTCAGAGCTGGTATaGATGGTATTGGTAGTGATG +
Preference number: 3 (lower is better)
Translates to: LEVISVVITLLLRISTVVLSELV*MVLVVM
Trigger: CATCACTACCAATACCATCAATACCAGCTCTGACAA...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR TCA 72 bp AAAATGTCAAGTGAATTGGCCCAGTTTCCTCGTAGATaGTTGGTAGTGAAGCCAACAACTGTGTTCACTGTT +
Preference number: 3 (lower is better)
Translates to: KMSSELAQFPRR*LVVKPTTVFTV
Trigger: AACAGTGAACACAGTTGTTGGCTTCACTACCAATCATCTACGAGGAAACTGGGCCAATTCACTTGACATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp ACTCTAAGGCTCCTCATTGCTTTTCCCACCACTTCATaGGGCTTTTGGGTGAACAAAGTTATTAATACAATG +
Preference number: 3 (lower is better)
Translates to: TLRLLIAFPTTS*GFWVNKVINTM
Trigger: CATTGTATTAATAACTTTGTTCACCCAAAAGCCGCATGAAGTGGTGGGAAAAGCAATGAGGAGCCTTAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp TTAAATCTCAACTGGCAAATGTTGCATGATATGATTTaGTTTCTTCGGTGGGGAAGAGGAACCCCGAATGTA +
Preference number: 3 (lower is better)
Translates to: LNLNWQMLHDMI*FLRWGRGTPNV
Trigger: TACATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR CCA 72 bp GCTTCAGAAGGTCTAGATACCACTACAAATCAATGCTaGAGATCACTTCTAAAACAATCAGCGTTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: ASEGLDTTTNQC*RSLLKQSAFKR
Trigger: CCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCAGCATTGATTTGTAGTGGTATCTAGACCTTCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGTTAGCATAATAGTCTaGCTAGAGTGCATAACATCT +
Preference number: 3 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTVSIIV*LECITS
Trigger: AGATGTTATGCACTCTAGCAAGACTATTATGCTAAC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTCCTTTGCCAAGAGATaGATATTAGATAAAACCCTG +
Preference number: 3 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTSFAKR*ILDKTL
Trigger: CAGGGTTTTATCTAATATCAATCTCTTGGCAAAGGA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATAGCATTCTGAGCGTTTaGGCTTCTGGTACTCAAGTC +
Preference number: 3 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSILSV*ASGTQV
Trigger: GACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATAAGGGTTACAACACTTaGAGAGCAGTTTCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYKGYNT*RAVSGR
Trigger: CCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGATGCATTTAAATTGTaGTTCCCTTCCACACCCCCA +
Preference number: 3 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYDAFKL*FPSTPP
Trigger: TGGGGGTGTGGAAGGGAACAACAATTTAAATGCATC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TGGAATATGGTAAGCTCCTCAATAAAGTACTTATTATGTGGCTGGCTGGATGAATTGTCAGAGCTGGTATaGATGGTATTGGTAGTGATG +
Preference number: 3 (lower is better)
Translates to: WNMVSSSIKYLLCGWLDELSELV*MVLVVM
Trigger: CATCACTACCAATACCATCAATACCAGCTCTGACAA...TTCATCCAGCCAGCCACATAATAAGTACTTTATTGAGGAGCTTACCATATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 72 bp CAAGCGAAGAATAAGGACATGAACAGACCAATGTCTTaGCACCACTGGCAATATTACATTTACCTGGACAAT +
Preference number: 3 (lower is better)
Translates to: QAKNKDMNRPMS*HHWQYYIYLDN
Trigger: ATTGTCCAGGTAAATGTAATATTGCCAGTGGTGTCAAGACATTGGTCTGTTCATGTCCTTATTCTTCGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp TCAGTGTCATTGCTCTTATTAATGCAACAGACTGGCTaGATCAAACCCCACCATTTTGATAGGTATATGTCA +
Preference number: 3 (lower is better)
Translates to: SVSLLLLMQQTG*IKPHHFDRYMS
Trigger: TGACATATACCTATCAAAATGGTGGGGTTTGATGCAGCCAGTCTGTTGCATTAATAAGAGCAATGACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 72 bp TTAAAGCAGAAACCTTTGCCTAAGAAACAACCCTACTaGTATGATATAAAGGGGATACTGCAGAGATGCAAC +
Preference number: 3 (lower is better)
Translates to: LKQKPLPKKQPY*YDIKGILQRCN
Trigger: GTTGCATCTCTGCAGTATCCCCTTTATATCATACCAGTAGGGTTGTTTCTTAGGCAAAGGTTTCTGCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTTCAAATGGTTTCCTCTaGATTCTTTATACCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSSNGFL*ILYTSP
Trigger: TGGAGAGGTATAAAGAATCAAGAGGAAACCATTTGA...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp CCTCAAATTGAAGGTAATGTTCAGTCCCTTGACATCTaGACATTGATGACCCAACCAGAGAATTCTTTAAAC +
Preference number: 3 (lower is better)
Translates to: PQIEGNVQSLDI*TLMTQPENSLN
Trigger: GTTTAAAGAATTCTCTGGTTGGGTCATCAATGTTCAGATGTCAAGGGACTGAACATTACCTTCAATTTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp GTCTTGTTATACCATGTCCTGCACACTACCTGGATTTaGGGAAGATTTTATAAGCATTCAAAGTCAGTACTC +
Preference number: 3 (lower is better)
Translates to: VLLYHVLHTTWI*GRFYKHSKSVL
Trigger: GAGTACTGACTTTGAATGCTTATAAAATCTTCCTCAAATCCAGGTAGTGTGCAGGACATGGTATAACAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp TTGTTGTACTGGCAAAAATACAATCTGGGTTTCCAATaGAGGCTCTCTCTGCTAATTTTCCGTTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: LLYWQKYNLGFQ*RLSLLIFRCLV
Trigger: AACAAGACAACGGAAAATTAGCAGAGAGAGCCTTCATTGGAAACCCAGATTGTATTTTTGCCAGTACAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp TCTGCTAATTTTCCGTTGTCTTGTTATACCATGTCCTaGACACTACCTGGATTTGAGGAAGATTTTATAAGC +
Preference number: 3 (lower is better)
Translates to: SANFPLSCYTMS*TLPGFEEDFIS
Trigger: GCTTATAAAATCTTCCTCAAATCCAGGTAGTGTGCAGGACATGGTATAACAAGACAACGGAAAATTAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCTGCTAATTTTCCGTaGTCTTGTTATACCATGTCC +
Preference number: 3 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSANFP*SCYTMS
Trigger: GGACATGGTATAACAAGACAACGGAAAATTAGCAGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGAAAATGTCAAGTGAATaGGCCCAGTTTCCTCGTAGA +
Preference number: 3 (lower is better)
Translates to: TTGNITFTWTILILSKREKMSSE*AQFPRR
Trigger: TCTACGAGGAAACTGGGCCAATTCACTTGACATTTT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR GCA 72 bp GATATTTATTGCTCATGTCTACTATGTGTTGGTTTGTaGCTTAGAAACTCAAATAGGCACAGCCTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: DIYCSCLLCVGL*LRNSNRHSLFD
Trigger: ATCAAAGAGGCTGTGCCTATTTGAGTTTCTAAGGCACAAACCAACACATAGTAGACATGAGCAATAAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR-3UTR CAA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATTAAAGCAGAAACCTTaGCCTAAGAAACAACCCTAC +
Preference number: 3 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALKQKP*PKKQPY
Trigger: GTAGGGTTGTTTCTTAGGCAAAGGTTTCTGCTTTAA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 72 bp TTTTTCCCAGATGGTGAATCTCAAAAGGGCACTATCTaGAATATGGTAAGCTCCTCAATAAAGTACTTATTA +
Preference number: 3 (lower is better)
Translates to: FFPDGESQKGTI*NMVSSSIKYLL
Trigger: TAATAAGTACTTTATTGAGGAGCTTACCATATTCCAGATAGTGCCCTTTTGAGATTCACCATCTGGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
3UTR TCA 72 bp TACCTTTGCAATTCTTTAAAACCTAGTGGCATAGATTaGGACACAGCACTATTGTTTTACAAGACATCTACT +
Preference number: 3 (lower is better)
Translates to: YLCNSLKPSGID*DTALLFYKTST
Trigger: AGTAGATGTCTTGTAAAACAATAGTGCTGTGTCTCAATCTATGCCACTAGGTTTTAAAGAATTGCAAAGGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR TCA 72 bp TATAAGCATTCAAAGTCAGTACTCAAAGTCAGTAGCTaGTGTGAAATGATACAATTGTATGACCCAACTCAA +
Preference number: 3 (lower is better)
Translates to: YKHSKSVLKVSS*CEMIQLYDPTQ
Trigger: TTGAGTTGGGTCATACAATTGTATCATTTCACATCAGCTACTGACTTTGAGTACTGACTTTGAATGCTTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CCA 72 bp ATTGTTTTACAAGACATCTACTGTATCTACTTTTGTTaGGATAAATACCCAGTAATTGCCGTCATAGCAAGA +
Preference number: 3 (lower is better)
Translates to: IVLQDIYCIYFC*DKYPVIAVIAR
Trigger: TCTTGCTATGACGGCAATTACTGGGTATTTATCCCAACAAAAGTAGATACAGTAGATGTCTTGTAAAACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCAGCAGCCGCCGGGGCTaGCTGTCCCGGGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCSSRRG*LSRETH
Trigger: GTGCGTCTCCCGGGACAGCCAGCCCCGGCGGCTGCT...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGGCCTCCTCCGCGGGATaGGCGCCTTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQASSAG*APCRLP
Trigger: AGGCAGCCTGCAAGGCGCTCATCCCGCGGAGGAGGC...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp CGTGCCTTTGTAGTGGGCCGCAGCCTGGCTATCAGAATTAAATCTCAACTGGCAAGCTCTTCATTCTCCTaGTGGCGGCCGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RAFVVGRSLAIRIKSQLASSSFS*WRPPGA
Trigger: GGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCT...TGCCAGTTGAGATTTAATTCTGATAGCCAGGCTGCGGCCCACTACAAAGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CCA 90 bp GTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAGAGCTGGTACAAAGGAGGGGCTGGTaGACGGACAAGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VVDIAGVPAVPSVLSELVQRRGW*TDKGRE
Trigger: CTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTG...TACCAGCTCTGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATTGTGGGCGGTCCGAATaGGTCCAGGAGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHCGRSE*VQELAA
Trigger: TGCGGCCAGCTCCTGGACCCATTCGGACCGCCCACA...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp AGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGGCGTGGAGAGCAGTaGGCGCCGAGAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RGDLSCHNTAFADFHSCRRRGEQ*APRACL
Trigger: GAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCG...ACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATGAAATGTCCCCGGCGTaGAGAGCAGTGAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHEMSPA*RAVSAE
Trigger: CTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTC...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTAAATCGCGGCTGGGCTaGGCTTTCGGCGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VITLLLRISTVVVVDIAGKSRLG*AFGAPR
Trigger: CCTGGGGGCGCCGAAAGCTCAGCCCAGCCGCGATTT...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTAGCTGGCCGCAGGAGTaGCGGAGGAAGCGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYISWPQE*RRKRGS
Trigger: ACTTCCGCGCTTCCTCCGGCACTCCTGCGGCCAGCT...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GTCTTTTTCCCAGATGGTGAATCTCAAAAGGGCACTATCTGGAATATGGTAAGCGCACGGCTGCCCGCCTaGAGCTTCAACGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: VFFPDGESQKGTIWNMVSARLPA*SFNGGG
Trigger: ACCACCGCCGTTGAAGCTGCAGGCGGGCAGCCGTGC...GCTTACCATATTCCAGATAGTGCCCTTTTGAGATTCACCATCTGGGAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CCA 90 bp ACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAGCTCTCACCCAAGGCTaGCACGTAGAGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TVVVVDIAGVPAVPSVLSALTQG*HVEQSP
Trigger: AGGGCTCTGCTCTACGTGCCAGCCTTGGGTGAGAGC...TGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTTTGCAAAGGAGGGGCTaGTGGACGGACAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLILQRRG*WTDKGR
Trigger: CCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAA...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR TCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGCCTCCTCCGCGGGATaGGCGCCTTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPASSAG*APCRLP
Trigger: AGGCAGCCTGCAAGGCGCTCATCCCGCGGAGGAGGC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTGCGCTCGGGCTGCCTaGTGCACTGCCCATCCTTAC +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTCARAA*CTAHPY
Trigger: GTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGGGGGAAGAGGTTGACTaGAGCTGCAGTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQGEEVD*SCSVKR
Trigger: CCTCTTGACACTGCAGCTGCAGTCAACCTCTTCCCC...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGACGGCGTGGAGAGCAGTaGGCGCCGAGAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRRRGEQ*APRACL
Trigger: GAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCG...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHHSCRR*YCWCPC
Trigger: GCAGGGACACCAGCAATATCAACGACGACAACTGTG...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCGAGGTTGACTGCAGCTaGAGTGTCAAGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCEVDCS*SVKRKG
Trigger: CCCTTTCCTCTTGACACTGCAGCTGCAGTCAACCTC...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGAAGGACATGAGCTATTaGCAGTGGCTGTCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQKDMSY*QWLSLG
Trigger: GCCCAACGACAGCCACTGGCAATAGCTCATGTCCTT...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAACTCACTGCCACTGCTaGTGCGGCTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGTHCHC*CGCCSC
Trigger: GCAGCTGCAGCAGCCGCAGCAGCAGTGGCAGTGAGT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGACTGCGGACTGCAGTaGCGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTDCGLQ*RNLGSL
Trigger: CAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGAATCCGACTCCTCCTTaGGATGTCCTTGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMNPTPP*DVLAAP
Trigger: AGGCGCGGCAAGGACATCGCAAGGAGGAGTCGGATT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTGAGCGCCTTGCAGGCTaGCTTTCCAGGGCTAAGATC +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYIERLAG*LSRAKI
Trigger: GATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTC...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGAGCGCCTTGCAGGCTaGCTTTCCAGGGCTAAGATC +
Preference number: 4 (lower is better)
Translates to: VITLLLRISTVVVVDIAGERLAG*LSRAKI
Trigger: GATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTC...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp ATGGATCTTTCATGCCCCAGTCCATTGTTGGGAGGCTCCAGTGTGTTTGTACTAATATCCAGCGATGGTTaGAAAGGAGGGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: MDLSCPSPLLGGSSVFVLISSDG*KGGAGG
Trigger: TCCACCAGCCCCTCCTTTGCAACCATCGCTGGATAT...TAGTACAAACACACTGGAGCCTCCCAACAATGGACTGGGGCATGAAAGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTTGTGCGCCTCCAGCTaGGAGGCAGAGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTLCASS*EAELTA
Trigger: TGCTGTCAACTCTGCCTCGCAGCTGGAGGCGCACAA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TTTTCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCGAAATGTCCCCGGCGTaGAGAGCAGTGAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: FSTLEVISVVITLLLRISEMSPA*RAVSAE
Trigger: CTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTC...GGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGAACAGCACAGGAGTGTaGGCGGTCCGAATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMNSTGV*AVRMGP
Trigger: TGGACCCATTCGGACCGCCCACACTCCTGTGCTGTT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTGGTTCCATAGCGAAGTaGGGCAGAAGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYIGSIAK*GRRDPG
Trigger: ACCTGGATCCCTTCTGCCTCACTTCGCTATGGAACC...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCAGAGTGCGCTCGGGCTaGCTGCTGCACTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISRVRSG*LLHCPS
Trigger: GGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCT...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTATTGCTGGTGTCCCTaGAGTACCGTCTTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCYCWCP*STVFFP
Trigger: TGGGAAAAAGACGGTACTGCAGGGACACCAGCAATA...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATCAAAGGAGGGGCTGGTaGACGGACAAGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYQRRGW*TDKGRE
Trigger: CTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTG...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAATTTGCTTTCTTCGGTaGGGAAGAGGAACCCCGAAT +
Preference number: 4 (lower is better)
Translates to: LLLRISTVVVVDIAGVPAICFLR*GRGTPN
Trigger: ATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAAT...TGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGGGAAGCGCGGAAGTCTaGAACAGTGTTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMGSAEV*NSVAAG
Trigger: TCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCC...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CFCGFPQLSSLI*LVSLQYRLFCQ
Trigger: CTGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
3UTR CAA 72 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTACCGTCTTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CFCGFPQLSSLI*LVSLQYRLFPR
Trigger: TCTGGGAAAAAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTGACAGTAATGCCTTGTaGCCCAGGACACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGDSNAL*PRTLCI
Trigger: GATACACAGTGTCCTGGGTCACAAGGCATTACTGTC...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATTAGTACCACTGTTGTaGGCCTCCAGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGLVPLL*ASSCEA
Trigger: TGCCTCGCAGCTGGAGGCGCACAACAGTGGTACTAA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTGCAGAGGGAAATAGGTaGCCAAAAGCACAGTCACAG +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGAEGNR*PKAQSQ
Trigger: CTGTGACTGTGCTTTTGGGCACCTATTTCCCTCTGC...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTTGCAAAGGAGGGGCTaGTGGACGGACAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYLQRRG*WTDKGR
Trigger: CCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ATGGATCTTTCATGCCCCAGTCCATTGTTGGGAGGCTCCAGTGTGTTTGTACTATTTAATATCCAGCGATaGTTGCAAAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MDLSCPSPLLGGSSVFVLFNIQR*LQRRGW
Trigger: CCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAA...TAGTACAAACACACTGGAGCCTCCCAACAATGGACTGGGGCATGAAAGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR TCA 90 bp TCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACACACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: STLEVISVVITLLLRISTHSCRR*YCWCPC
Trigger: GCAGGGACACCAGCAATATCAACGACGACAACTGTG...TGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATGGGCAAGGCATTAGTTaGCTATTTAAGTTACCCTGT +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHGQGIS*LFKLPC
Trigger: ACAGGGTAACTTAAATAGTCAACTAATGCCTTGCCC...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAGCTCGGGCTGCCTGCTaGACTGCCCATCCTTACTGT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRARAAC*TAHPYC
Trigger: ACAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGC...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTTTCATGGCTTCCAGTaGTTTGAGCTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: FPQLSSLILLVSLQYRLFFHGFQ*FELLGM
Trigger: CATGCCAAGAAGCTCAAAGCACTGGAAGCCATGAAA...AAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGAGTCTGGAACAGTGTTaGTGCTGGAGCAGTTCGAAG +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMSLEQC*CWSSSK
Trigger: CTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGCTCTCACCCAAGGCTaGCACGTAGAGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYALTQG*HVEQSP
Trigger: AGGGCTCTGCTCTACGTGCCAGCCTTGGGTGAGAGC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGGGAGAGCAGGACTCTaGCATGTACCACCAAAATAC +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTGRAGL*HVPPKY
Trigger: GTATTTTGGTGGTACATGCCAGAGTCCTGCTCTCCC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTATTTGCTTTCTTCGGTaGGGAAGAGGAACCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLIICFLR*GRGTPN
Trigger: ATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAAT...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CCA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTTCTTTGCGCTGTCCTTaGCAGTTACAGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPSLRCP*QLQISA
Trigger: AGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGA...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR CAA 72 bp GTACCGTCTGTTTTGTCAGAGCTGGTATTGATGGTATaGGTAGTGATGGAGGTGAAGGTAGTCTTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VPSVLSELVLMV*VVMEVKVVFAL
Trigger: CAGCGCAAAGACTACCTTCACCTCCATCACTACCAATACCATCAATACCAGCTCTGACAAAACAGACGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR TCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTCCAGGGAGACCTCCATaGCACCATCCGGTGTATGTT +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPPGRPP*HHPVYV
Trigger: AACATACACCGGATGGTGTCATGGAGGTCTCCCTGG...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTTCCTTGCCATGGTGTaGTGCATGGGAAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTFLAMV*CMGRNV
Trigger: TACATTCCTTCCCATGCATCACACCATGGCAAGGAA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGGGGACCCCTTCCTATTaGAGAGAGAAAGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMGTPSY*REKVQQ
Trigger: TTGTTGCACTTTCTCTCTTCAATAGGAAGGGGTCCC...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTACTGTGGCTGACCAATaGTTCGGAATCTCACATTGG +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYITVADQ*FGISHW
Trigger: CCAATGTGAGATTCCGAATCATTGGTCAGCCACAGT...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCATGTGGCTGGCTGGATaGATAATTGAATCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCMWLAG*IIESSV
Trigger: AACACTAGATTCAATTATTCATCCAGCCAGCCACAT...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTAAGGACATGAGCTATTaGCAGTGGCTGTCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSKDMSY*QWLSLG
Trigger: GCCCAACGACAGCCACTGGCAATAGCTCATGTCCTT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTATGCAACAGACTGGCTaGATCAAACCCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGMQQTG*IKPHHF
Trigger: AAAATGGTGGGGTTTGATGCAGCCAGTCTGTTGCAT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATATTGAGGTGCAACAATaGTTTTTCCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHIEVQQ*FFQRHL
Trigger: CAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAAT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTATGGCAGTGAATTACTaGGATAGATCAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGMAVNY*DRSGEA
Trigger: GGCTTCTCCTGATCTATCGCAGTAATTCACTGCCAT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGTCCCAGCCCCTCCAATaGCCTAAAATGATTAATGCC +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMSQPLQ*PKMINA
Trigger: GGCATTAATCATTTTAGGGCATTGGAGGGGCTGGGA...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCCGCATGGATCTTTCATaGCCCAGTCCATTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LEVISVVITLLLRISTVVRMDLS*PSPLLG
Trigger: TCCCAACAATGGACTGGGGCATGAAAGATCCATGCG...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCATTTGCTTTCTTCGGTaGGGAAGAGGAACCCCGAAT +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTICFLR*GRGTPN
Trigger: ATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAAT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGAACAGTGTTGCTGCTaGAGCAGTTCGAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTEQCCC*SSSKTE
Trigger: TTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATAAAATGGTTAGAAGCTaGTCACATGGGATACAGACA +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHKMVRS*SHGIQT
Trigger: TGTCTGTATCCCATGTGACCAGCTTCTAACCATTTT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATGGCAAAAATACAATCTaGGTTTCCAATGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHGKNTI*VSNEGS
Trigger: AGAGCCTTCATTGGAAACCCAGATTGTATTTTTGCC...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp GGGTTTCCAATGAAGGCTCTCTCTGCTAATTTTCCGTaGTCTTGTTATACCATGTCCTGCACACTACCTGGA +
Preference number: 4 (lower is better)
Translates to: GFPMKALSANFP*SCYTMSCTLPG
Trigger: TCCAGGTAGTGTGCAGGACATGGTATAACAAGACAACGGAAAATTAGCAGAGAGAGCCTTCATTGGAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTCTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPLANVA*YDLLSS
Trigger: CGAAGAAAGCAAATCATATCATGCAACATTTGCCAG...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAGCTGCGAGGCAGAGTTaGCAGCAACCTTGCATAGCG +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAAARQS*QQPCIA
Trigger: CGCTATGCAAGGTTGCTGTCAACTCTGCCTCGCAGC...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTACAAGAGCGCATAACTaGTATACTTGTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGTRAHN*YTCLWK
Trigger: CTTCCACAGACAAGTATATCAGTTATGCGCTCTTGT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTAGTCTGAAAATAACATaGCCCCATTATCGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGSLKIT*PHYRLS
Trigger: AGACAGCCGATAATGGGGTCATGTTATTTTCAGACT...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATCACACTACCTGGATTTaGGGAAGATTTTATAAGCAT +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHHTTWI*GRFYKH
Trigger: ATGCTTATAAAATCTTCCTCAAATCCAGGTAGTGTG...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTTGGCATCACTGTGGCTaGCCAATGATTCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSWHHCG*PMIRNL
Trigger: GAGATTCCGAATCATTGGTCAGCCACAGTGATGCCA...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGCGGCTGAATTCAGCTaGATGTTACATACATTGCAC +
Preference number: 4 (lower is better)
Translates to: VITLLLRISTVVVVDIAGAAEFS*MLHTLH
Trigger: GTGCAATGTATGTAACATTCAGCTGAATTCAGCCGC...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTTCAGCGTCCCATTGCTaGGTTGTTTTAATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPSASHC*VVLISF
Trigger: AAAAGAGATTAAAACAACTCAGCAATGGGACGCTGA...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTCCTTGCGATGTCCTTaGCGCGCCTGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKRESLRCP*RACDIR
Trigger: CCTGATGTCACAGGCGCGGCAAGGACATCGCAAGGA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTAGCAGAGCCCTTTCATaGTACATTCGGTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: VITLLLRISTVVVVDIAGSRALS*YIRWKC
Trigger: ACATTTCCACCGAATGTAGCATGAAAGGGCTCTGCT...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTATATCCAGCGATGGTTaGAAAGGAGGGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPISSDG*KGGAGG
Trigger: TCCACCAGCCCCTCCTTTGCAACCATCGCTGGATAT...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCTATTGCTGGTGTCCCTaGAGTACCGTCTGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LEVISVVITLLLRISTVVYCWCP*STVCFV
Trigger: GACAAAACAGACGGTACTGCAGGGACACCAGCAATA...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR GCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTTTCCCACCACTTCATaGGGCTTTTGGGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYIFPTTS*GFWVNK
Trigger: TTTGTTCACCCAAAAGCCGCATGAAGTGGTGGGAAA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTCTAAGGCTCCTCATTaGTTTTCCCACCACTTCATG +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYISKAPH*FSHHFM
Trigger: CATGAAGTGGTGGGAAAAGCAATGAGGAGCCTTAGA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp CAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAGCCAATCCAGTTCTTTTaGTTGTGCCATATCAGAATT +
Preference number: 4 (lower is better)
Translates to: QLSSLILLVSLQYRLFCQPIQFF*LCHIRI
Trigger: AATTCTGATATGGCACAAGCAAAAGAACTGGATTGG...CTGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGTCTTTGCGCTGTCCTTaGCAGTTACAGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMSLRCP*QLQISA
Trigger: AGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGA...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGATTAATGCAACAGACTaGCTGCATCAAACCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMINATD*LHQTPP
Trigger: TGGTGGGGTTTGATGCAGCCAGTCTGTTGCATTAAT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGGGCAACTATCCACCTaGCTGAACTACCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYGQLST*LNYQGL
Trigger: CAGACCCTGGTAGTTCAGCCAGGTGGATAGTTGCCC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGCAAACAACAGACTTATaGGCAACTATCCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMQTTDL*ATIHLA
Trigger: AGCCAGGTGGATAGTTGCCCATAAGTCTGTTGTTTG...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTGTGCCCAGATCCCTTaGCCACAAGGCTTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYCAQIP*PQGFFA
Trigger: GGCGAAAAAGCCTTGTGGCCAAGGGATCTGGGCACA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAGAGCGTTTTGGCTTCTaGTACTCAAGTCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGERFGF*YSSQTS
Trigger: GGAAGTCTGACTTGAGTACCAGAAGCCAAAACGCTC...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp CTTGATTCTTTATACCTCTCCAAGGGTTACAACACTTaGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LDSLYLSKGYNT*RAVSGRPHPIL
Trigger: AAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTTGGAGAGGTATAAAGAATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp GCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTaGGCTTCTGGTACTCAAGTCAGACTTCCAGATACA +
Preference number: 4 (lower is better)
Translates to: AIKVAQISILSV*ASGTQVRLPDT
Trigger: TGTATCTGGAAGTCTGACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTAAATGTTGCATGATATaGTTTGCTTTCTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLIKCCMI*FAFFGG
Trigger: CCCACCGAAGAAAGCAAATCATATCATGCAACATTT...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGTTGCGTTTCCGAGTTaGCGTGCACATCACAGATTT +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSVAFPS*RAHHRF
Trigger: AAATCTGTGATGTGCACGTCAACTCGGAAACGCAAC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAGAGCAGTTCGAAGACTaGAGGGGGAACTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAEQFED*RGNSLP
Trigger: TGGCAGTGAGTTCCCCCTTCAGTCTTCGAACTGCTC...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGGCTCATTCACTTTGGTaGAAATGGGAAAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMAHSLW*KWERTA
Trigger: TGCTGTTCTTTCCCATTTTCACCAAAGTGAATGAGC...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGTATCCCATAGGCCCTaGTTTTTAGTGGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPVSHRP*FLVDWL
Trigger: GAGCCAGTCCACTAAAAATCAGGGCCTATGGGATAC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCACATATGCAAGTATGTaGGTAGCTGCATTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTTYASM*VAALVT
Trigger: AGTGACCAATGCAGCTACTCACATACTTGCATATGT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGACATCAAAATGTCAAGTaGATTGGCCCAGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGHQNVK*IGPVSS
Trigger: CGAGGAAACTGGGCCAATTCACTTGACATTTTGATG...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTCACAAATTAGCATTCTaGGCGTTTTGGCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYIHKLAF*AFWLLV
Trigger: TACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTG...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGATGAGACGTGTTCTGTaGGTCACTACAATTCTCACT +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMMRRVL*VTTILT
Trigger: AGTGAGAATTGTAGTGACTCACAGAACACGTCTCAT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GTCTTTTTCCCAGATGGTGAATCTCAAAAGGGCACTATCTGGAATATGGTAAGCTTGTGCTTGAGCGGCTaGATTCAGCTGAATGTTACA +
Preference number: 4 (lower is better)
Translates to: VFFPDGESQKGTIWNMVSLCLSG*IQLNVT
Trigger: TGTAACATTCAGCTGAATTCAGCCGCTCAAGCACAA...GCTTACCATATTCCAGATAGTGCCCTTTTGAGATTCACCATCTGGGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGAGGTTGACTGCAGCTaGAGTGTCAAGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYEVDCS*SVKRKG
Trigger: CCCTTTCCTCTTGACACTGCAGCTGCAGTCAACCTC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAGGGGAAGAGGTTGACTaGAGCTGCAGTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAGEEVD*SCSVKR
Trigger: CCTCTTGACACTGCAGCTGCAGTCAACCTCTTCCCC...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCTTTCATGGCTTCCAGTaGTTTGAGCTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LEVISVVITLLLRISTVVFHGFQ*FELLGM
Trigger: CATGCCAAGAAGCTCAAAGCACTGGAAGCCATGAAA...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR GCA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATAGAGATGCTGGTAAATaGAAAATCACCAGATACTTT +
Preference number: 4 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHRDAGK*KITRYF
Trigger: AAAGTATCTGGTGATTTTGCATTTACCAGCATCTCT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGACTACAATTCTCACTTaGCACTTGGAACAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMTTILT*HLEQSC
Trigger: ACACGACTGTTCCAAGTGCCAAGTGAGAATTGTAGT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp CATGAGACGTGTTCTGTGAGTCACTACAATTCTCACTaGGCACTTGGAACAGTCGTGTTATATAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: HETCSVSHYNSH*ALGTVVLYRFT
Trigger: GGTAAACCTATATAACACGACTGTTCCAAGTGCCAAGTGAGAATTGTAGTGACTCACAGAACACGTCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp TTTATCTCTGTTTTGTCAGAGCTGGTATTGATGGTATaGGTAGTGATGGAGGTGAAGGTAGTCTTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: FISVLSELVLMV*VVMEVKVVFAL
Trigger: CAGCGCAAAGACTACCTTCACCTCCATCACTACCAATACCATCAATACCAGCTCTGACAAAACAGAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTAAATGTTGCATGATATaGTTTGCTTTCTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VITLLLRISTVVVVDIAGKCCMI*FAFFGG
Trigger: CCCACCGAAGAAAGCAAATCATATCATGCAACATTT...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR TCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATCTGGACGATCTGATTaGGGTGCAACAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGSGRSD*GATMLF
Trigger: AAAAAGCATTGTTGCACCTCAATCAGATCGTCCAGA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAAAAGTTGAGGTCCAGTaGGAGGAGCAATTTATCATG +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGKVEVQ*EEQFIM
Trigger: CATGATAAATTGCTCCTCTCACTGGACCTCAACTTT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCAAATGAGGCAGGGGTaGTATAAATTGCCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSQMRQG*YKLPKA
Trigger: GGCTTTTGGCAATTTATATCACCCCTGCCTCATTTG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTTTTCACTGGACACCCTaGTACCACTCTCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSFHWTP*YHSQKY
Trigger: GTATTTCTGAGAGTGGTATCAGGGTGTCCAGTGAAA...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAATGAGTTTCCATCACTaGGAAGAGGAAAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGMSFHH*EEERED
Trigger: GTCTTCTCTTTCCTCTTCTCAGTGATGGAAACTCAT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCATTAATGCCCCAAAATaGTTAAGACTCCCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTINAPK*LRLPSV
Trigger: CACACTTGGGAGTCTTAATCATTTTGGGGCATTAAT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGTGTTCACTGTTCTGTaGTGCTCGATCTTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYVFTVL*CSILCP
Trigger: TGGGCACAAGATCGAGCATCACAGAACAGTGAACAC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTGTAGGGTGAGAAATTaGTGTTTGGGGAGATGTTAT +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYICRVRN*CLGRCY
Trigger: ATAACATCTCCCCAAACATCAATTTCTCACCCTACA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCACATATCATGTAGGGTaGGAAATTGATGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTTYHVG*EIDVWG
Trigger: TCCCCAAACATCAATTTCTCACCCTACATGATATGT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGCAGCTCTGTCTTTGTaGCTTCTACTGCTAATGTGC +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPAALSL*LLLLMC
Trigger: GCACATTAGCAGTAGAAGGCACAAAGACAGAGCTGC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATTCCAGAGTAGAACCTaGCTTTTGTCACCATTCACA +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGFQSRT*LLSPFT
Trigger: TGTGAATGGTGACAAAAGGCAGGTTCTACTCTGGAA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCAACACTCATGATGCATaGGTTTCTCTGCTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTNTHDA*VSLLSD
Trigger: ATCTGAAAGCAGAGAAACCCATGCATCATGAGTGTT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTGTATTGGTAAATATATaGAGTGTGGGGGAAACAACT +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGVLVNI*SVGETT
Trigger: AGTTGTTTCCCCCACACTCCATATATTTACCAATAC...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
3UTR CAA 72 bp ACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTaGCGGATTTCCACAGTTGTCGTCGTTGATATTGCT +
Preference number: 4 (lower is better)
Translates to: TLEVISVVITLL*RISTVVVVDIA
Trigger: AGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
3UTR CAA 72 bp GCCTGGCTATCAGAATTAAATCTCAACTGGCAAATGTaGCATGATATGATTTGCTTTCTTCGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AWLSELNLNWQM*HDMICFLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATAGCCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp TTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCCTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LEVISVVITLLLRISTVVLANVA*YDLLSS
Trigger: CGAAGAAAGCAAATCATATCATGCAACATTTGCCAG...GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTACAACCCTACTGGTATaGTATAAAGGGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSTTLLV*YKGDTA
Trigger: TGCAGTATCCCCTTTATATCATACCAGTAGGGTTGT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAGGGTTACAACACTTTaGGAGCAGTTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRRVTTL*EQFQEG
Trigger: GCCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGCAAATGGTTTCCTCTTaGTTCTTTATACCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMQMVSS*FFIPLQ
Trigger: TTGGAGAGGTATAAAGAATCAAGAGGAAACCATTTG...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTCAGAGAAGCATGGTTTaGAATTCTTTCTACCAGAAT +
Preference number: 4 (lower is better)
Translates to: YNTLRAVSGRPHPILPYIQRSMV*NSFYQN
Trigger: ATTCTGGTAGAAAGAATTTCAAACCATGCTTCTCTG...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGTGGATCTTTATTCATaGAAAAAGTTCCCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTVDLYS*KKFPKG
Trigger: TCCCTTAGGGAACTTTTTTCATGAATAAAGATCCAC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATAGTACTCTTCAAAGTTaGGGTCCAGTGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSTLQS*GPVRGA
Trigger: TGCTCCTCTCACTGGACCTCAACTTTGAAGAGTACT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGACAGTCCCTTGACATCTaGACATTGATGACCCAACCA +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRQSLDI*TLMTQP
Trigger: TGGTTGGGTCATCAATGTTCAGATGTCAAGGGACTG...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGCTCAAAGTCAGTAGCTaGTGTGAAATGATACAATTG +
Preference number: 4 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMLKVSS*CEMIQL
Trigger: CAATTGTATCATTTCACATCAGCTACTGACTTTGAG...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCTATTGCTGGTGTCCCTaGAGTACCGTCTGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISYCWCP*STVCFV
Trigger: GACAAAACAGACGGTACTGCAGGGACACCAGCAATA...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATCTAACATGGTTTTGTaGTTAGTACCACTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGSNMVL*LVPLLC
Trigger: GCACAACAGTGGTACTAAGCACAAAACCATGTTAGA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCACTGGAACAGTGTTGCTaGTGGAGCAGTTCGAAGACT +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALEQCC*WSSSKT
Trigger: AGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAG...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGACTCTATCACTTTCCTTaGCATGGTGTGATGCATGGG +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRLYHFP*HGVMHG
Trigger: CCCATGCATCACACCATGGCAAGGAAAGTGATAGAG...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCTTTAATATCCAGCGATaGTTGCAAAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISFNIQR*LQRRGW
Trigger: CCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAA...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTCACTATCAAAAGTCCTaGCTCTTCAGATATACTTTA +
Preference number: 4 (lower is better)
Translates to: TWAIKVAQISILSVLASGHYQKS*LFRYTL
Trigger: TAAAGTATATCTGAAGAGCCAGGACTTTTGATAGTG...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCACTTTCCTTGCCATaGTGTGATGCATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSLSLP*CDAWEG
Trigger: TCCTTCCCATGCATCACACCATGGCAAGGAAAGTGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTAATCGGGTCCATCTCTaGTCTGAATCACTCTCATAT +
Preference number: 4 (lower is better)
Translates to: SVVITLLLRISTVVVVDINRVHL*SESLSY
Trigger: ATATGAGAGTGATTCAGACCAGAGATGGACCCGATT...AATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTAAATGTTGCATGATATaGTTTGCTTTCTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSKCCMI*FAFFGG
Trigger: CCCACCGAAGAAAGCAAATCATATCATGCAACATTT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSLANVA*YDLLSS
Trigger: CGAAGAAAGCAAATCATATCATGCAACATTTGCCAG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATACCAGGGTCTGTAGGTaGAAAAGGAAACACTTGCTA +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYTRVCR*KRKHLL
Trigger: TAGCAAGTGTTTCCTTTTTCACCTACAGACCCTGGT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGATTTGTCTGGACGATCTaGTTGAGGTGCAACAATGCT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRFVWTI*LRCNNA
Trigger: AGCATTGTTGCACCTCAATCAGATCGTCCAGACAAA...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTTTCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCTTGCATGATATGATTTaGTTTCTTCGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSTLEVISVVITLLLRISLHDMI*FLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAA...GGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR GCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAATGTGCTGTTTAAGTTaGGTTTCCGAGTTGACGTGC +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRMCCLS*VSELTC
Trigger: GCACGTCAACTCGGAAACGCAACTTAAACAGCACAT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTTGTTATACCATGTCCTaGACACTACCTGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPCYTMS*TLPGFE
Trigger: CTCAAATCCAGGTAGTGTGCAGGACATGGTATAACA...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGCACCAAGCACGCTATaGTGTTTCTTAAATATAAAA +
Preference number: 4 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTAPSTL*CFLNIK
Trigger: TTTTATATTTAAGAAACACCATAGCGTGCTTGGTGC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATTTTCCAGAGGCATTTaGCTTCTGCAATGCATTTAT +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGFSRGI*LLQCIY
Trigger: ATAAATGCATTGCAGAAGCCAAATGCCTCTGGAAAA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGAAGGTGGCATCACTGTaGCTGACCAATGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKREKVASL*LTNDSE
Trigger: TTCCGAATCATTGGTCAGCCACAGTGATGCCACCTT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TGGAATATGGTAAGCTCCTCAATAAAGTACTTATTATGTGGCTGGCTGGATGAACAAAAGGGCACTATCTaGAATATGGTAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WNMVSSSIKYLLCGWLDEQKGTI*NMVSSS
Trigger: TGAGGAGCTTACCATATTCCAGATAGTGCCCTTTTG...TTCATCCAGCCAGCCACATAATAAGTACTTTATTGAGGAGCTTACCATATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR TCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCATGCGGCTTTTGGGTaGACAAAGTTATTAATACAA +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSHAAFG*TKLLIQ
Trigger: TTGTATTAATAACTTTGTTCACCCAAAAGCCGCATG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAGCCTCTCTAGCTACTaGAGCAAACCATACAAAAAC +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRSLSSY*SKPYKN
Trigger: GTTTTTGTATGGTTTGCTTCAGTAGCTAGAGAGGCT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGCAGTTTCCTCGTAGATaGTTGGTAGTGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKREQFPRR*LVVKPT
Trigger: TGTTGGCTTCACTACCAATCATCTACGAGGAAACTG...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAACAGACCAATGTCTTaGCACCACTGGCAATATTAC +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRNRPMS*HHWQYY
Trigger: GTAATATTGCCAGTGGTGTCAAGACATTGGTCTGTT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAAGCAGAGCCCTTTCATaGTACATTCGGTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHASRALS*YIRWKC
Trigger: ACATTTCCACCGAATGTAGCATGAAAGGGCTCTGCT...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TGGAATATGGTAAGCTCCTCAATAAAGTACTTATTATGTGGCTGGCTGGATGAATTGCATGATATGATTTaGTTTCTTCGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WNMVSSSIKYLLCGWLDELHDMI*FLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAA...TTCATCCAGCCAGCCACATAATAAGTACTTTATTGAGGAGCTTACCATATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATTTCATGGCTTCCAGTaGTTTGAGCTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAFHGFQ*FELLGM
Trigger: CATGCCAAGAAGCTCAAAGCACTGGAAGCCATGAAA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAAAGAAACAACCCTACTaGTATGATATAAAGGGGATA +
Preference number: 4 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGKKQPY*YDIKGI
Trigger: TATCCCCTTTATATCATACCAGTAGGGTTGTTTCTT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCCATTTAAACAAAAATaGTTCCATAGCGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSPFKQK*FHSEVR
Trigger: CCTCACTTCGCTATGGAACCATTTTTGTTTAAATGG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCAATGTGTGTTAAGTTaGGTTGACAAACGTCCAATA +
Preference number: 4 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSQCVLS*VDKRPI
Trigger: TATTGGACGTTTGTCAACCCAACTTAACACACATTG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTTTATTACAGCTTTCTaGATCGGGTCCATCGCATTG +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKREFITAF*IGSIAL
Trigger: CAATGCGATGGACCCGATTCAGAAAGCTGTAATAAA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGCCTAGTGGCATAGATTaGGACACAGCACTATTGTTT +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKREPSGID*DTALLF
Trigger: AAACAATAGTGCTGTGTCTCAATCTATGCCACTAGG...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAGTAGCATATCTTACATaGTGTTGGCATAAGTGCGAT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRVAYLT*CWHKCD
Trigger: ATCGCACTTATGCCAACATCATGTAAGATATGCTAC...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGAATCTGGGTTTCCAATaGAGGCTCTCTCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKRENLGFQ*RLSLLI
Trigger: AATTAGCAGAGAGAGCCTTCATTGGAAACCCAGATT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTGTGTTAAGTTGGGTTaGCAAACGTCCAATAAAACC +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYCVKLG*QTSNKT
Trigger: GGTTTTATTGGACGTTTGTCAACCCAACTTAACACA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCACGAAGAATAAGGACATaGACAGACCAATGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHARRIRT*TDQCLD
Trigger: GTCAAGACATTGGTCTGTTCATGTCCTTATTCTTCG...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTCTATGTGTTGGTTTGTaGCTTAGAAACTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPLCVGL*LRNSNR
Trigger: CCTATTTGAGTTTCTAAGGCACAAACCAACACATAG...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCCAAAAACACAAGAGATaGTCCAGAGATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISQKHKR*SRDKSP
Trigger: GGGAGATTTATCTCTGGAGCATCTCTTGTGTTTTTG...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAGTTGTAAAGGTTGTTaGATAGGGACTCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRSCKGC*IGTQDD
Trigger: ATCATCCTGAGTCCCTATCCAACAACCTTTACAACT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAAATGTCAAGTGAATTaGCCCAGTTTCCTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRKCQVN*PSFLVD
Trigger: ATCTACGAGGAAACTGGGCCAATTCACTTGACATTT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTATTTACCGAACACATaGGCCATTAAGGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKREYLPNT*AIKVAQ
Trigger: TTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATTCTGGTTGAGCATATaGATGACCTACAATATGGCT +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAFWLSI*MTYNMA
Trigger: AGCCATATTGTAGGTCATTCATATGCTCAACCAGAA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATTGCATGATATGATTTaGTTTCTTCGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALHDMI*FLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAAGTATGTGAGTAGCTaGATTGGTCACTCGAATAAA +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRKYVSS*IGHSNK
Trigger: TTTATTCGAGTGACCAATGCAGCTACTCACATACTT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATATTTTTCTGGACATATaGAAGTATGTGAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYIFLDI*KYVSSC
Trigger: GCAGCTACTCACATACTTGCATATGTCCAGAAAAAT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCAGGAATGCTTTAATTTaGAGAAAATACCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISRNALI*RKYHSL
Trigger: GAGGGAGTGGTATTTTCTCCAAATTAAAGCATTCCT...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCACTGATGGAGAAAATATaGCTGATTCGTTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHALMEKI*LIRLFP
Trigger: TGGGAACAAACGAATCAGCCATATTTTCTCCATCAG...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTCTGAGATTTCTTATATaGCTGATGGAGAAAATATGG +
Preference number: 4 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPLRFLI*LMEKIW
Trigger: CCATATTTTCTCCATCAGCCATATAAGAAATCTCAG...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAATACCATGTAGGCAATaGAGACCTACCATTAGAAAT +
Preference number: 4 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRIPCRQ*RPTIRN
Trigger: ATTTCTAATGGTAGGTCTCCATTGCCTACATGGTAT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR TCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATTTCTACCAGAATACTaGTGGAACACATTATCTTCC +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAFLPEY*WNTLSS
Trigger: GGAAGATAATGTGTTCCATCAGTATTCTGGTAGAAA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCGAGGCATTTGGCTTCTaGAATGCATTTATATTTGTT +
Preference number: 4 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISEAFGF*NAFIFV
Trigger: AACAAATATAAATGCATTGCAGAAGCCAAATGCCTC...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAATTTCACAACTCCACTaGAGAAATAATTGTCGAGTG +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAISQLH*RNNCRV
Trigger: CACTCGACAATTATTTCTCCAGTGGAGTTGTGAAAT...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR GCA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAAGGGGTGATATAAATTaGCAAAAGCCAAGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHARGDIN*QKPSMF
Trigger: AAACATACTTGGCTTTTGGCAATTTATATCACCCCT...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGTTAACCAGAGAAGCATaGTTTGAAATTCTTTCTACC +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKRELTREA*FEILST
Trigger: GGTAGAAAGAATTTCAAACCATGCTTCTCTGGTTAA...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CCA 90 bp ACCACTGGCAATATTACATTTACCTGGACAATTTTGATATTGTCAAAGAGAGAGACTTCATGCGGCTTTTaGGTGAACAAAGTTATTAAT +
Preference number: 4 (lower is better)
Translates to: TTGNITFTWTILILSKRETSCGF*VNKVIN
Trigger: ATTAATAACTTTGTTCACCCAAAAGCCGCATGAAGT...CTCTCTCTTTGACAATATCAAAATTGTCCAGGTAAATGTAATATTGCCAGTGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 90 bp CCCGGCGCCCTGGCCCTGGCATCCGGGAGGAGCAGCCGCCGGGGCTaGCTGTCCCGGGAGACGCACGGCTGCCCGCCTGCAGCTTCAACG +
Preference number: 5 (lower is better)
Translates to: PGALALASGRSSRRG*LSRETHGCPPAAST
Trigger: CGTTGAAGCTGCAGGCGGGCAGCCGTGCGTCTCCCGGGACAGCCAGCCCCGGCGGCTGCTCCTCCCGGATGCCAGGGCCAGGGCGCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS CCA 90 bp GAACGGTCTCCGTTGCGCAGCGCGTGCTGTCCCTCCGGCACGGGCTaGAGGTGGCAGTCAGCGCGCCTCTGCCTCCGCCGCGCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: ERSPLRSACCPSGTG*RWQSARLCLRRARG
Trigger: GCCGCGAGCGCGGCGGAGGCAGAGGCGCGCTGACTGCCACCTCCAGCCCGTGCCGGAGGGACAGCACGCGCTGCGCAACGGAGACCGTTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 90 bp CGAGCTCTTCATTCTCCTGCTGGCGGCCGCCCGGCGCCCTGGCCCTaGCATCCGGGAGGAGCAGCCGCCGGGGCTGGCTGTCCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: RALHSPAGGRPAPWP*HPGGAAAGAGCPGR
Trigger: TCTCCCGGGACAGCCAGCCCCGGCGGCTGCTCCTCCCGGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS CCA 90 bp TCCCACCGAGCTCTTCATTCTCCTGCTGGCGGCCGCCCGGCGCCCTaGCCCTGGCATCCGGGAGGAGCAGCCGCCGGGGCTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SHRALHSPAGGRPAP*PWHPGGAAAGAGCP
Trigger: GGGACAGCCAGCCCCGGCGGCTGCTCCTCCCGGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCGGTGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS TCA 90 bp CGGCTGCCCGCCTGCAGCTTCAACGGCGGTGGTCGCCGCGAGCCGTaGGCGGCGGCCAAGGAGAACGGTCTCCGTTGCGCAGCGCGTGCT +
Preference number: 5 (lower is better)
Translates to: RLPACSFNGGGRREP*AAAKENGLRCAARA
Trigger: AGCACGCGCTGCGCAACGGAGACCGTTCTCCTTGGCCGCCGCTCACGGCTCGCGGCGACCACCGCCGTTGAAGCTGCAGGCGGGCAGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 90 bp TGTCCCGGGAGACGCACGGCTGCCCGCCTGCAGCTTCAACGGCGGTaGTCGCCGCGAGCCGTGAGCGGCGGCCAAGGAGAACGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: CPGRRTAARLQLQRR*SPRAVSGGQGERSP
Trigger: CGGAGACCGTTCTCCTTGGCCGCCGCTCACGGCTCGCGGCGACCACCGCCGTTGAAGCTGCAGGCGGGCAGCCGTGCGTCTCCCGGGACA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS GCA 90 bp AGCGCCGAGAGCGTGCCTCCTCCGCGGGATGAGCGCCTTGCAGGCTaGCTTTCCAGGGCTAAGATCCCCGGCGGCTGGAGAGTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: SAESVPPPRDERLAG*LSRAKIPGGWRVRS
Trigger: CGAGCGCACTCTCCAGCCGCCGGGGATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTCATCCCGCGGAGGAGGCACGCTCTCGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 90 bp CCAGGAGCTTTTCTCTCCTTCCTCCCACCGAGCTCTTCATTCTCCTaGTGGCGGCCGCCCGGCGCCCTGGCCCTGGCATCCGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PGAFLSFLPPSSSFS*WRPPGALALASGRS
Trigger: GCTCCTCCCGGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCGGTGGGAGGAAGGAGAGAAAAGCTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS CCA 90 bp GGAGCTTTTCTCTCCTTCCTCCCACCGAGCTCTTCATTCTCCTGCTaGCGGCCGCCCGGCGCCCTGGCCCTGGCATCCGGGAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAFLSFLPPSSSFSC*RPPGALALASGRSS
Trigger: GCTGCTCCTCCCGGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCGGTGGGAGGAAGGAGAGAAAAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS CCA 90 bp GAGCGCCTTGCAGGCTGCCTTTCCAGGGCTAAGATCCCCGGCGGCTaGAGAGTGCGCTCGGGCTGCCTGCTGCACTGCCCATCCTTACTG +
Preference number: 5 (lower is better)
Translates to: ERLAGCLSRAKIPGG*RVRSGCLLHCPSLL
Trigger: CAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS TCA 90 bp CTTTCATGCTACATTCGGTGGAAATGTCCCCGGCGTGGAGAGCAGTaGGCGCCGAGAGCGTGCCTCCTCCGCGGGATGAGCGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSCYIRWKCPRRGEQ*APRACLLRGMSALQ
Trigger: CTGCAAGGCGCTCATCCCGCGGAGGAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTCCACCGAATGTAGCATGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS GCA 90 bp GGGCTAAGATCCCCGGCGGCTGGAGAGTGCGCTCGGGCTGCCTGCTaGACTGCCCATCCTTACTGTAATCCGACTCCTCCTTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: GLRSPAAGECARAAC*TAHPYCNPTPPCDV
Trigger: GACATCGCAAGGAGGAGTCGGATTACAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGATCTTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 90 bp CCAGGGCTAAGATCCCCGGCGGCTGGAGAGTGCGCTCGGGCTGCCTaGTGCACTGCCCATCCTTACTGTAATCCGACTCCTCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: PGLRSPAAGECARAA*CTAHPYCNPTPPCD
Trigger: ATCGCAAGGAGGAGTCGGATTACAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGATCTTAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 90 bp GAGCAGAGCCCTTTCATGCTACATTCGGTGGAAATGTCCCCGGCGTaGAGAGCAGTGAGCGCCGAGAGCGTGCCTCCTCCGCGGGATGAG +
Preference number: 5 (lower is better)
Translates to: EQSPFMLHSVEMSPA*RAVSAESVPPPRDE
Trigger: CTCATCCCGCGGAGGAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTCCACCGAATGTAGCATGAAAGGGCTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS CCA 90 bp GGTCCAGGAGCTGGCCGCAGGAGTGCCGGAGGAAGCGCGGAAGTCTaGAACAGTGTTGCTGCTGGAGCAGTTCGAAGACTGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GPGAGRRSAGGSAEV*NSVAAGAVRRLKGE
Trigger: TTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTCCTGCGGCCAGCTCCTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 90 bp CCGCAGGAGTGCCGGAGGAAGCGCGGAAGTCTGGAACAGTGTTGCTaGTGGAGCAGTTCGAAGACTGAAGGGGGAACTCACTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: PQECRRKRGSLEQCC*WSSSKTEGGTHCHC
Trigger: GCAGTGGCAGTGAGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTCCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 90 bp TGGCCGCAGGAGTGCCGGAGGAAGCGCGGAAGTCTGGAACAGTGTTaGTGCTGGAGCAGTTCGAAGACTGAAGGGGGAACTCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: WPQECRRKRGSLEQC*CWSSSKTEGGTHCH
Trigger: GTGGCAGTGAGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTCCTGCGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 90 bp GAATTTAGTAAGGAGCAAACAGCACAGGAGTGTGGGCGGTCCGAATaGGTCCAGGAGCTGGCCGCAGGAGTGCCGGAGGAAGCGCGGAAG +
Preference number: 5 (lower is better)
Translates to: EFSKEQTAQECGRSE*VQELAAGVPEEARK
Trigger: CTTCCGCGCTTCCTCCGGCACTCCTGCGGCCAGCTCCTGGACCCATTCGGACCGCCCACACTCCTGTGCTGTTTGCTCCTTACTAAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 90 bp CAGGAGTGCCGGAGGAAGCGCGGAAGTCTGGAACAGTGTTGCTGCTaGAGCAGTTCGAAGACTGAAGGGGGAACTCACTGCCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: QECRRKRGSLEQCCC*SSSKTEGGTHCHCC
Trigger: GCAGCAGTGGCAGTGAGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 90 bp GGGAAGAAATGGTTTAATATCCAGCGATGGTTGCAAAGGAGGGGCTaGTGGACGGACAAGGGCCGGGAGAGCAGGACTCTGGCATGTACC +
Preference number: 5 (lower is better)
Translates to: GKKWFNIQRWLQRRG*WTDKGRESRTLACT
Trigger: GGTACATGCCAGAGTCCTGCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAACCATTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS CCA 90 bp TGGAATCCCACCGCGGTGTCTTCAGCATCAGCTCTCACCCAAGGCTaGCACGTAGAGCAGAGCCCTTTCATGCTACATTCGGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: WNPTAVSSASALTQG*HVEQSPFMLHSVEM
Trigger: CATTTCCACCGAATGTAGCATGAAAGGGCTCTGCTCTACGTGCCAGCCTTGGGTGAGAGCTGATGCTGAAGACACCGCGGTGGGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS CCA 90 bp AAGAAATGGTTTAATATCCAGCGATGGTTGCAAAGGAGGGGCTGGTaGACGGACAAGGGCCGGGAGAGCAGGACTCTGGCATGTACCACC +
Preference number: 5 (lower is better)
Translates to: KKWFNIQRWLQRRGW*TDKGRESRTLACTT
Trigger: GGTGGTACATGCCAGAGTCCTGCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAACCATTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000494108.2
CDS TCA 90 bp GCTGCATCTCACCACTGTTGTGCGCCTCCAGCTGCGAGGCAGAGTTaGCAGCAACCTTGCATAGCGAACAGTAAAGAAGCCGTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: AASHHCCAPPAARQS*QQPCIANSKEAVLP
Trigger: AGGCAAAACGGCTTCTTTACTGTTCGCTATGCAAGGTTGCTGTCAACTCTGCCTCGCAGCTGGAGGCGCACAACAGTGGTGAGATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS CCA 90 bp TGCAGTGTCAAGAGGAAAGGGAAGAAATGGTTTAATATCCAGCGATaGTTGCAAAGGAGGGGCTGGTGGACGGACAAGGGCCGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: CSVKRKGKKWFNIQR*LQRRGWWTDKGRES
Trigger: GCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAACCATTTCTTCCCTTTCCTCTTGACACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS CCA 90 bp AAGAAATGGTTTAATATCCAGCGATGGTTGCAAAGGAGGGGCTGGTaGACGGACAAGGGCCGGGAGAGCAGGACTCTGGCATGTACCACA +
Preference number: 5 (lower is better)
Translates to: KKWFNIQRWLQRRGW*TDKGRESRTLACTT
Trigger: TGTGGTACATGCCAGAGTCCTGCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAACCATTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGACGCGGGATGAGCGCCTaGCAGGCTGCCTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGRGMSA*QAAFPG
Trigger: CCCTGGAAAGGCAGCCTGCAAGGCGCTCATCCCGCG...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACACGCGGGATGAGCGCCTaGCAGGCTGCCTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: STLEVISVVITLLLRISTRGMSA*QAAFPG
Trigger: CCCTGGAAAGGCAGCCTGCAAGGCGCTCATCCCGCG...TGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTCATGCCCCAGTCCATaGTTGGGAGGCTCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQSCPSP*LGGSSV
Trigger: CACACTGGAGCCTCCCAACAATGGACTGGGGCATGA...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp CTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGAAGGACATGAGCTATaGCCAGTGGCTGTCGTTGGG +
Preference number: 5 (lower is better)
Translates to: LLLRISTVVVVDIAGVPAEGHEL*PVAVVG
Trigger: CCCAACGACAGCCACTGGCAATAGCTCATGTCCTTC...TGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CAA 90 bp TTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGGTCTTTGCGCTGTCCTaGGCAGTTACAGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LRISTVVVVDIAGVPAVPVFALS*AVTDFC
Trigger: GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGAC...CGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp TTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTAC +
Preference number: 5 (lower is better)
Translates to: LRISTVVVVDIAGVPAVPLSSLI*LVSLQY
Trigger: GTACTGCAGGGACACCAGCAATATCAACGACGACAA...CGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp GTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTGTCAGAGCTGGTACCACAGTTGTCGTCGTaGATATTGCTGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VVDIAGVPAVPSVLSELVPQLSS*ILLVSL
Trigger: CAGGGACACCAGCAATATCAACGACGACAACTGTGG...TACCAGCTCTGACAAAACAGACGGTACTGCAGGGACACCAGCAATATCAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS GCA 90 bp GAGCAGGACTCTGGCATGTACCACATAGATCTTCCCATTGGAGACTaGGTCTTTGGGCCTGATTTTTCACCCTTCTTCATATCCATGCCC +
Preference number: 5 (lower is better)
Translates to: EQDSGMYHIDLPIGD*VFGPDFSPFFISMP
Trigger: GGGCATGGATATGAAGAAGGGTGAAAAATCAGGCCCAAAGACGCAGTCTCCAATGGGAAGATCTATGTGGTACATGCCAGAGTCCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS GCA 90 bp GAGACCTCAGTACTCAAGGAATGGCTTCGAAGCCATTCCTTGCTCTaGACTAAGACAAGCAGAGGGGCCATCCTACTTTTCTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: ETSVLKEWLRSHSLL*TKTSRGAILLFSTN
Trigger: GTTTGTGGAGAAAAGTAGGATGGCCCCTCTGCTTGTCTTAGTGCAGAGCAAGGAATGGCTTCGAAGCCATTCCTTGAGTACTGAGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497570.1
CDS GCA 90 bp ACACAGAGACCTCAGTACTCAAGGAATGGCTTCGAAGCCATTCCTTaGTCTGCACTAAGACAAGCAGAGGGGCCATCCTACTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TQRPQYSRNGFEAIP*SALRQAEGPSYFSP
Trigger: TGGAGAAAAGTAGGATGGCCCCTCTGCTTGTCTTAGTGCAGAGCAAGGAATGGCTTCGAAGCCATTCCTTGAGTACTGAGGTCTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497570.1
CDS-3UTR CAA 90 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGATCGGGTCCATCGCATaGAAATTGGGGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: CFCGFPQLSSLILLVSLQIGSIA*KLGKRL
Trigger: CAACCTCTTCCCCAATTTCAATGCGATGGACCCGAT...CTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp CGTGCCTTTGTAGTGGGCCGCAGCCTGGCTATCAGAATTAAATCTCAACTGGCATGCGGATTTCCACAGTaGTCGTCGTTGATATTGCTG +
Preference number: 5 (lower is better)
Translates to: RAFVVGRSLAIRIKSQLACGFPQ*SSLILL
Trigger: CAGCAATATCAACGACGACAACTGTGGAAATCCGCA...TGCCAGTTGAGATTTAATTCTGATAGCCAGGCTGCGGCCCACTACAAAGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CAA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTGCTTAGTACCACTGTaGTGCGCCTCCAGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: YNTLRAVSGRPHPILPYICLVPL*CASSCE
Trigger: CTCGCAGCTGGAGGCGCACAACAGTGGTACTAAGCA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CCCAGATCCCTTGGCCACAAGGCTTTTTCGCCAATATCCAGTACTTCCACACATAAGTCTGGAACAGTGTaGCTGCTGGAGCAGTTCGAA +
Preference number: 5 (lower is better)
Translates to: PRSLGHKAFSPISSTSTHKSGTV*LLEQFE
Trigger: TTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTT...ATGTGTGGAAGTACTGGATATTGGCGAAAAAGCCTTGTGGCCAAGGGATCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS TCA 90 bp CATCAGGTATTAATTCAGCCTCACTCTCGCCATCGTGTACACAGGTaGAATCTGTCTGTCTCCTCTCTCTCTCACAAGCACACGCACTCA +
Preference number: 5 (lower is better)
Translates to: HQVLIQPHSRHRVHR*NLSVSSLSHKHTHS
Trigger: TGAGTGCGTGTGCTTGTGAGAGAGAGAGGAGACAGACAGATTTCACCTGTGTACACGATGGCGAGAGTGAGGCTGAATTAATACCTGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466511.1
CDS TCA 90 bp ACCTTGGCCATGTTCCTTTTACGACATGCCACACAGACCAGACAGTaGATTTGTCAGCACCTTGATCTTGGACTTCTCAGCCTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: TLAMFLLRHATQTRQ*ICQHLDLGLLSLRK
Trigger: TTTCCGGAGGCTGAGAAGTCCAAGATCAAGGTGCTGACAAATTCACTGTCTGGTCTGTGTGGCATGTCGTAAAAGGAACATGGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS-3UTR CAA 90 bp GTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTAATATCCAGCGATGGTaGCAAAGGAGGGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VITLLLRISTVVVVDIAGNIQRW*QRRGWW
Trigger: CCACCAGCCCCTCCTTTGCAACCATCGCTGGATATT...ACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp TTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTGCAGTACCGTCTGTTTTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTAC +
Preference number: 5 (lower is better)
Translates to: FPQLSSLILLVSLQYRLFLSSLI*LVSLQY
Trigger: GTACTGCAGGGACACCAGCAATATCAACGACGACAA...AAACAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTCCACAGTTGTCGTCGTaGATATTGCTGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLIPQLSS*ILLVSL
Trigger: CAGGGACACCAGCAATATCAACGACGACAACTGTGG...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTGAGGCTCCAGTGTGTTaGTACTACCTAATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLIEAPVC*YYLMGP
Trigger: TGGCCCCATTAGGTAGTACAAACACACTGGAGCCTC...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp ATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCTGCCCCAGTCCATTGTaGGGAGGCTCCAGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: ITLLLRISTVVVVDIAGVCPSPL*GGSSVF
Trigger: AAACACACTGGAGCCTCCCAACAATGGACTGGGGCA...GACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS TCA 90 bp CATGTACCACATAGATCTTCCCATTGGAGACTGCGTCTTTGGGCCTaGTTTTTCACCCTTCTTCATATCCATGCCCTCTGCCATGCAACT +
Preference number: 5 (lower is better)
Translates to: HVPHRSSHWRLRLWA*FFTLLHIHALCHAT
Trigger: AGTTGCATGGCAGAGGGCATGGATATGAAGAAGGGTGAAAAATCAGGCCCAAAGACGCAGTCTCCAATGGGAAGATCTATGTGGTACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS TCA 90 bp AGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTCTTGTGCAGAATGG +
Preference number: 5 (lower is better)
Translates to: SCHNTAFADFHSCRR*YCWCPCSTVSCAEW
Trigger: CCATTCTGCACAAGAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAAATATCCAGCGATGGTaGCAAAGGAGGGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGNIQRW*QRRGWW
Trigger: CCACCAGCCCCTCCTTTGCAACCATCGCTGGATATT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp ATGGATCTTTCATGCCCCAGTCCATTGTTGGGAGGCTCCAGTGTGTTTGTACTAGCAGTACCGTCTGTTTaGTCAGAGCTGGTATTGATG +
Preference number: 5 (lower is better)
Translates to: MDLSCPSPLLGGSSVFVLAVPSV*SELVLM
Trigger: CATCAATACCAGCTCTGACAAAACAGACGGTACTGC...TAGTACAAACACACTGGAGCCTCCCAACAATGGACTGGGGCATGAAAGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTAC +
Preference number: 5 (lower is better)
Translates to: TWAIKVAQISILSVLASGLSSLI*LVSLQY
Trigger: GTACTGCAGGGACACCAGCAATATCAACGACGACAA...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTTGCGGATTTCCACAGTaGTCGTCGTTGATATTGCTG +
Preference number: 5 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPCGFPQ*SSLILL
Trigger: CAGCAATATCAACGACGACAACTGTGGAAATCCGCA...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTAGTGCTTTGAGCTTCTaGGCATGTTTCGTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLISALSF*ACFVPL
Trigger: CAAAGGCACGAAACATGCCAAGAAGCTCAAAGCACT...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp GTGATGGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTGTCAGAGCTGGTATaGATGGTATTGGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: VMEVKVVFALSLAVTDFCLSELV*MVLVVM
Trigger: CATCACTACCAATACCATCAATACCAGCTCTGACAA...GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGAAGGACATGAGCTATaGCCAGTGGCTGTCGTTGGG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSEGHEL*PVAVVG
Trigger: CCCAACGACAGCCACTGGCAATAGCTCATGTCCTTC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CGTGCCTTTGTAGTGGGCCGCAGCCTGGCTATCAGAATTAAATCTCAACTGGCATTTTTCAGCGTCCCATaGCTGAGTTGTTTTAATCTC +
Preference number: 5 (lower is better)
Translates to: RAFVVGRSLAIRIKSQLAFFSVP*LSCFNL
Trigger: GAGATTAAAACAACTCAGCAATGGGACGCTGAAAAA...TGCCAGTTGAGATTTAATTCTGATAGCCAGGCTGCGGCCCACTACAAAGGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CAA 90 bp TCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTCTTTGCGCTGTCCTaGGCAGTTACAGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: STLEVISVVITLLLRISTVFALS*AVTDFC
Trigger: GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGAC...TGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTTTGTCAGAGCTGGTATaGATGGTATTGGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPLSELV*MVLVVM
Trigger: CATCACTACCAATACCATCAATACCAGCTCTGACAA...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCCACAGTTGTCGTCGTaGATATTGCTGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSPQLSS*ILLVSL
Trigger: CAGGGACACCAGCAATATCAACGACGACAACTGTGG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCAGTTGCGTTTCCGAGTaGACGTGCACATCACAGATT +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTSCVSE*TCTSQI
Trigger: AATCTGTGATGTGCACGTCAACTCGGAAACGCAACT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 90 bp TTTCTGAATCGGGTCCATCGCATTGAAATTGGGGAAGAGGTTGACTaGAGCTGCAGTGTCAAGAGGAAAGGGAAGAAATGGTTTAATATC +
Preference number: 5 (lower is better)
Translates to: FLNRVHRIEIGEEVD*SCSVKRKGKKWFNI
Trigger: GATATTAAACCATTTCTTCCCTTTCCTCTTGACACTGCAGCTGCAGTCAACCTCTTCCCCAATTTCAATGCGATGGACCCGATTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGATGCGGATTTCCACAGTaGTCGTCGTTGATATTGCTG +
Preference number: 5 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGCGFPQ*SSLILL
Trigger: CAGCAATATCAACGACGACAACTGTGGAAATCCGCA...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGTCATAACACTGCTTTaGCGGATTTCCACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTVITLL*RISTVV
Trigger: GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGAGTAAAGAAGCCGTTTaGCCTTTTCTTCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMSKEAV*PFLPRS
Trigger: AGACCGAGGAAGAAAAGGCAAAACGGCTTCTTTACT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCAGCTGCGAGGCAGAGTaGACAGCAACCTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISSCEAE*TATLHS
Trigger: GCTATGCAAGGTTGCTGTCAACTCTGCCTCGCAGCT...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTTATTAACAGGTCCTTaGCCTTTCACTCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: YNTLRAVSGRPHPILPYILLTGP*PFTPAL
Trigger: TAGGGCAGGAGTGAAAGGCAAAGGACCTGTTAATAA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCCAGCAGCTCTGTCTTaGTGCCTTCTACTGCTAATG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSPAALS*CLLLLM
Trigger: CATTAGCAGTAGAAGGCACAAAGACAGAGCTGCTGG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCAGCTGCTAGAGGATTaGGTAGAATTCGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSQLLED*VEFVEP
Trigger: TGGCTCCACGAATTCTACCAAATCCTCTAGCAGCTG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCGATGCATTTAAATTGTaGTTCCCTTCCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTDAFKL*FPSTPP
Trigger: TGGGGGTGTGGAAGGGAACAACAATTTAAATGCATC...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCGGGACCCCTTCCTATaGAAGAGAGAAAGTGCAACA +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSRDPFL*KRESAT
Trigger: TGTTGCACTTTCTCTCTTCAATAGGAAGGGGTCCCG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAAGCATTCTGAGCGTTTaGGCTTCTGGTACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGSILSV*ASGTQV
Trigger: GACTTGAGTACCAGAAGCCAAAACGCTCAGAATGCT...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp GGAGGTGAAGGTAGTCTTTGCGCTGTCCTTGGCAGTTACAGATTTCTGCTTATTGCCAATCCAGTTCTTTaGCTTGTGCCATATCAGAAT +
Preference number: 5 (lower is better)
Translates to: GGEGSLCAVLGSYRFLLIANPVL*LVPYQN
Trigger: ATTCTGATATGGCACAAGCAAAAGAACTGGATTGGC...AATAAGCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGACTACCTTCACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS TCA 90 bp TGCCACACAGACATCAGAATTAAATCTCAACTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCGGTGGGGAAGAGGAACCCCGAATGT +
Preference number: 5 (lower is better)
Translates to: CHTDIRIKSQLANVA*YDLLSSVGKRNPEC
Trigger: ACATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATGTCTGTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469927.5
CDS TCA 90 bp TTTACGACATGCCACACAGACCAGACAGTGAATTTGTCAGCACCTTaGTCTTGGACTTCTCAGCCTCCGGAAATCAGAATTAAATCTCAA +
Preference number: 5 (lower is better)
Translates to: FTTCHTDQTVNLSAP*SWTSQPPEIRIKSQ
Trigger: TTGAGATTTAATTCTGATTTCCGGAGGCTGAGAAGTCCAAGATCAAGGTGCTGACAAATTCACTGTCTGGTCTGTGTGGCATGTCGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS GCA 90 bp GCTTTGATAGTGCCACTTCCATTCCGGGCTTCTAACATGGTTTTGTaGTTAGTACCTATCAACTTTAAGCTCCAAGTCCTCAGTAGTAAC +
Preference number: 5 (lower is better)
Translates to: ALIVPLPFRASNMVL*LVPINFKLQVLSSN
Trigger: GTTACTACTGAGGACTTGGAGCTTAAAGTTGATAGGTACTAAGCACAAAACCATGTTAGAAGCCCGGAATGGAAGTGGCACTATCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467140.1
CDS-3UTR CAA 90 bp ACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGCTGGTGTCCCTCTCAACTGGCAAATGTaGCATGATATGATTTGCTTT +
Preference number: 5 (lower is better)
Translates to: TLLLRISTVVVVDIAGVPLNWQM*HDMICF
Trigger: AAAGCAAATCATATCATGCAACATTTGCCAGTTGAG...AGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp TCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTAGTGCTTTGAGCTTCTaGGCATGTTTCGTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SVVITLLLRISTVVVVDISALSF*ACFVPL
Trigger: CAAAGGCACGAAACATGCCAAGAAGCTCAAAGCACT...AATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGTCTTTGCGCTGTCCTaGGCAGTTACAGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPVFALS*AVTDFC
Trigger: GCAGAAATCTGTAACTGCCAAGGACAGCGCAAAGAC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCTTGTCAGAGCTGGTATaGATGGTATTGGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTLSELV*MVLVVM
Trigger: CATCACTACCAATACCATCAATACCAGCTCTGACAA...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGCAGTACCGTCTGTTTaGTCAGAGCTGGTATTGATG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSAVPSV*SELVLM
Trigger: CATCAATACCAGCTCTGACAAAACAGACGGTACTGC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTCATAACACTGCTTTaGCGGATTTCCACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: STLEVISVVITLLLRISTVITLL*RISTVV
Trigger: GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC...TGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp TCCACTTTAGAGGTGATCTCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAAGTAAAGAAGCCGTTTaGCCTTTTCTTCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: STLEVISVVITLLLRISTSKEAV*PFLPRS
Trigger: AGACCGAGGAAGAAAAGGCAAAACGGCTTCTTTACT...TGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGAGATCACCTCTAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCAAACCATGTTTAATGTaGAGCACCAAGCACGCTATG +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTKPCLM*STKHAM
Trigger: CATAGCGTGCTTGGTGCTCAACATTAAACATGGTTT...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp ACATGGGCCATTAAGGTGGCACAAATTAGCATTCTGAGCGTTTTGGCTTCTGGTGCAACTACTCCAATATaGGTGAAATGTACATTCTGG +
Preference number: 5 (lower is better)
Translates to: TWAIKVAQISILSVLASGATTPI*VKCTFW
Trigger: CCAGAATGTACATTTCACCAATATTGGAGTAGTTGC...ACCAGAAGCCAAAACGCTCAGAATGCTAATTTGTGCCACCTTAATGGCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS TCA 90 bp TGCTTGTGCCATATCAGAATTAAATCTCAACTGGCAAATGTTGCATaGTATGATTTGCTTTCTTCGGTGGGGAAGAGGAACCCCGAATGT +
Preference number: 5 (lower is better)
Translates to: CLCHIRIKSQLANVA*YDLLSSVGKRNPEC
Trigger: ACATTCGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATATGGCACAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS-3UTR CAA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCATCGGGTCCATCGCATaGAAATTGGGGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISIGSIA*KLGKRL
Trigger: CAACCTCTTCCCCAATTTCAATGCGATGGACCCGAT...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAGTTGTCATAACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATTGTCATAACACTGCTTTaGCGGATTTCCACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SVVITLLLRISTVVVVDIVITLL*RISTVV
Trigger: GACAACTGTGGAAATCCGCAAAAGCAGTGTTATGAC...AATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTTATGACAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446749.1
ENST00000494118.5
CDS-3UTR CAA 90 bp GATTCGTTTGTTCCCAGCAAATCATTAAAGACAGTAATGCCTTGTGACCCAGGAGCTTCTAACATGGTTTaGTGCTTAGTACCACTGTTG +
Preference number: 5 (lower is better)
Translates to: DSFVPSKSLKTVMPCDPGASNMV*CLVPLL
Trigger: CAACAGTGGTACTAAGCACAAAACCATGTTAGAAGC...TCCTGGGTCACAAGGCATTACTGTCTTTAATGATTTGCTGGGAACAAACGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATGCCCTAGGAAAGGCTTaGATAGTGCCACTTCCATTC +
Preference number: 5 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYALGKA*IVPLPF
Trigger: GAATGGAAGTGGCACTATCAAAGCCTTTCCTAGGGC...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTAATGTGCTGTTTAAGTaGCGTTTCCGAGTTGACGTG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSNVLFK*RFRVDV
Trigger: CACGTCAACTCGGAAACGCAACTTAAACAGCACATT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTTAAAGCAGAAACCTTaGCCTAAGAAACAACCCTAC +
Preference number: 5 (lower is better)
Translates to: YNTLRAVSGRPHPILPYILKQKP*PKKQPY
Trigger: GTAGGGTTGTTTCTTAGGCAAAGGTTTCTGCTTTAA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTAAGGGTTACAACACTTaGAGAGCAGTTTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSKGYNT*RAVSGR
Trigger: CCTTCCTGAAACTGCTCTCAAAGTGTTGTAACCCTT...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTCCCTATATTTCTGCTAATTTTCCGTaGTCTTGTTATACCATGTCC +
Preference number: 5 (lower is better)
Translates to: YNTLRAVSGRPHPILPYISANFP*SCYTMS
Trigger: GGACATGGTATAACAAGACAACGGAAAATTAGCAGA...AATATAGGGAAGGATTGGGTGTGGCCTTCCTGAAACTGCTCTCAAAGTGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAATGGAACAGGCAAGTTaGATGCCAAGGTGGCATCAC +
Preference number: 5 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRMEQAS*MPRWHH
Trigger: GTGATGCCACCTTGGCATCAAACTTGCCTGTTCCAT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGATTCTCACTTGGCACTaGGAACAGTCGTGTTATATA +
Preference number: 5 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMILTWH*EQSCYI
Trigger: TATATAACACGACTGTTCCAAGTGCCAAGTGAGAAT...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCCATCGCATTGAAATaGGGGAAGAGGTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSIALK*GKRLTA
Trigger: TGCAGTCAACCTCTTCCCCAATTTCAATGCGATGGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp GATCTGATTGAGGTGCAACAATGCTTTTTCCAGAGGCATTTGGCTTCTGCAATGCTCAACTGGCAAATGTaGCATGATATGATTTGCTTT +
Preference number: 5 (lower is better)
Translates to: DLIEVQQCFFQRHLASAMLNWQM*HDMICF
Trigger: AAAGCAAATCATATCATGCAACATTTGCCAGTTGAG...CATTGCAGAAGCCAAATGCCTCTGGAAAAAGCATTGTTGCACCTCAATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAGTGCTTTGAGCTTCTaGGCATGTTTCGTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRSALSF*ACFVPL
Trigger: CAAAGGCACGAAACATGCCAAGAAGCTCAAAGCACT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCAAAGAGAGAGGATATAATGGCTAAGGATGTTCCTAGAGCTGCTGAAGGAACCCCCAAATTGAAAACATaGCCTATGGATTATCTACAG +
Preference number: 5 (lower is better)
Translates to: SKREDIMAKDVPRAAEGTPKLKT*PMDYLQ
Trigger: CTGTAGATAATCCATAGGCAATGTTTTCAATTTGGG...GGTTCCTTCAGCAGCTCTAGGAACATCCTTAGCCATTATATCCTCTCTCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp AAAAAGCAAATTTATTTACCGAACACATGGGCCATTAAGGTGGCACAAATTAGCCACTACAATTCTCACTaGGCACTTGGAACAGTCGTG +
Preference number: 5 (lower is better)
Translates to: KKQIYLPNTWAIKVAQISHYNSH*ALGTVV
Trigger: CACGACTGTTCCAAGTGCCAAGTGAGAATTGTAGTG...GCTAATTTGTGCCACCTTAATGGCCCATGTGTTCGGTAAATAAATTTGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTGTGGAGCCAATGGCTTaGAAGGTTCTTTTGAAAATA +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSVEPMA*KVLLKI
Trigger: TATTTTCAAAAGAACCTTCAAAGCCATTGGCTCCAC...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCATCTCTATCACTTTCCTaGCCATGGTGTGATGCATGG +
Preference number: 5 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHASLSLS*PWCDAW
Trigger: CCATGCATCACACCATGGCAAGGAAAGTGATAGAGA...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTTTTTTCCAGAGGCATTaGGCTTCTGCAATGCATTTA +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSFFQRH*ASAMHL
Trigger: TAAATGCATTGCAGAAGCCAAATGCCTCTGGAAAAA...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TTGTCTGTGGAAGAGATGGTCTTAATAAGGCAACCATTAGTTAAAATACATGCAAAGTACTCTTCAAAGTaGAGGTCCAGTGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LSVEEMVLIRQPLVKIHAKYSSK*RSSERS
Trigger: GCTCCTCTCACTGGACCTCAACTTTGAAGAGTACTT...TGCATGTATTTTAACTAATGGTTGCCTTATTAAGACCATCTCTTCCACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TCCATCACTGAGAAGAGGAAAGAGAAGACCCTCAAATTGAAGGTAATGTTCAGTCATGTCTACTATGTGTaGGTTTGTGCCTTAGAAACT +
Preference number: 5 (lower is better)
Translates to: SITEKRKEKTLKLKVMFSHVYYV*VCALET
Trigger: AGTTTCTAAGGCACAAACCAACACATAGTAGACATG...ACTGAACATTACCTTCAATTTGAGGGTCTTCTCTTTCCTCTTCTCAGTGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp ATAAGAGACATAAAGCATCTCACGAAGGGTCTTTATCCAATATTAGTTGCCCCTGAACAGACCAATGTCTaGACACCACTGGCAATATTA +
Preference number: 5 (lower is better)
Translates to: IRDIKHLTKGLYPILVAPEQTNV*TPLAIL
Trigger: TAATATTGCCAGTGGTGTCAAGACATTGGTCTGTTC...AGGGGCAACTAATATTGGATAAAGACCCTTCGTGAGATGCTTTATGTCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAAAAATGTCAAGTGAATaGGCCCAGTTTCCTCGTAGA +
Preference number: 5 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRKMSSE*AQFPRR
Trigger: TCTACGAGGAAACTGGGCCAATTCACTTGACATTTT...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATACAAATGATGTAGCTTaGGCATCAGGTCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYTNDVA*ASGQFH
Trigger: ATGGAACTGACCTGATGCCAAAGCTACATCATTTGT...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TGGAATATGGTAAGCTCCTCAATAAAGTACTTATTATGTGGCTGGCTGGATGAACTCAACTGGCAAATGTaGCATGATATGATTTGCTTT +
Preference number: 5 (lower is better)
Translates to: WNMVSSSIKYLLCGWLDELNWQM*HDMICF
Trigger: AAAGCAAATCATATCATGCAACATTTGCCAGTTGAG...TTCATCCAGCCAGCCACATAATAAGTACTTTATTGAGGAGCTTACCATATTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494118.5
CDS-3UTR CAA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGACCAGAGAAGCATGGTTaGAAATTCTTTCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRPEKHG*KFFLPE
Trigger: TTCTGGTAGAAAGAATTTCAAACCATGCTTCTCTGG...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp TGGAGATCACTTCTAAAACAATCAGCGTTCAAGAGGAATGCTTTAATTTGGAGAGTGAAATGTTTTATTTaGGAGGCCTGTGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: WRSLLKQSAFKRNALIWRVKCFI*EACVSF
Trigger: AAAGGAAACACAGGCCTCCAAAATAAAACATTTCAC...TCTCCAAATTAAAGCATTCCTCTTGAACGCTGATTGTTTTAGAAGTGATCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCAAATGGTTTCCTCTaGATTCTTTATACCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSNGFL*ILYTSP
Trigger: TGGAGAGGTATAAAGAATCAAGAGGAAACCATTTGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS-3UTR CAA 90 bp CTTGGAACAGTCGTGTTATATAGGTTTACCATAACTCTCAGAACAGGAGTATATTCCTTTGCCAAGAGATaGATATTAGATAAAACCCTG +
Preference number: 5 (lower is better)
Translates to: LGTVVLYRFTITLRTGVYSFAKR*ILDKTL
Trigger: CAGGGTTTTATCTAATATCAATCTCTTGGCAAAGGA...ATATACTCCTGTTCTGAGAGTTATGGTAAACCTATATAACACGACTGTTCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 72 bp GAGTCCCGAGCCGGCGTCAGCCCAGGTGCACCAGGCTaGGGAGAGGTGCGAGCCCGCGCGAAGGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: ESRAGVSPGAPG*GEVRARAKGGA
Trigger: GGCCCCTCCCTTCGCGCGGGCTCGCACCTCTCCCCAGCCTGGTGCACCTGGGCTGACGCCGGCTCGGGACTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 72 bp CCGTTGCGCAGCGCGTGCTGTCCCTCCGGCACGGGCTaGAGGTGGCAGTCAGCGCGCCTCTGCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PLRSACCPSGTG*RWQSARLCLRR
Trigger: GCGGCGGAGGCAGAGGCGCGCTGACTGCCACCTCCAGCCCGTGCCGGAGGGACAGCACGCGCTGCGCAACGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CAA 72 bp CGAGCCGTGAGCGGCGGCCAAGGAGAACGGTCTCCGTaGCGCAGCGCGTGCTGTCCCTCCGGCACGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RAVSGGQGERSP*RSACCPSGTGW
Trigger: CCAGCCCGTGCCGGAGGGACAGCACGCGCTGCGCAACGGAGACCGTTCTCCTTGGCCGCCGCTCACGGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CAA 90 bp TGGTCGCCGCGAGCCGTGAGCGGCGGCCAAGGAGAACGGTCTCCGTaGCGCAGCGCGTGCTGTCCCTCCGGCACGGGCTGGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: WSPRAVSGGQGERSP*RSACCPSGTGWRWQ
Trigger: CTGCCACCTCCAGCCCGTGCCGGAGGGACAGCACGCGCTGCGCAACGGAGACCGTTCTCCTTGGCCGCCGCTCACGGCTCGCGGCGACCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 72 bp AGACGCACGGCTGCCCGCCTGCAGCTTCAACGGCGGTaGTCGCCGCGAGCCGTGAGCGGCGGCCAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: RRTAARLQLQRR*SPRAVSGGQGE
Trigger: TTCTCCTTGGCCGCCGCTCACGGCTCGCGGCGACCACCGCCGTTGAAGCTGCAGGCGGGCAGCCGTGCGTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 72 bp CTCTCCTTCCTCCCACCGAGCTCTTCATTCTCCTGCTaGCGGCCGCCCGGCGCCCTGGCCCTGGCATCCGGG +
Preference number: 6 (lower is better)
Translates to: LSFLPPSSSFSC*RPPGALALASG
Trigger: CCCGGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCGGTGGGAGGAAGGAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS TCA 72 bp GCCTGCAGCTTCAACGGCGGTGGTCGCCGCGAGCCGTaGGCGGCGGCCAAGGAGAACGGTCTCCGTTGCGCA +
Preference number: 6 (lower is better)
Translates to: ACSFNGGGRREP*AAAKENGLRCA
Trigger: TGCGCAACGGAGACCGTTCTCCTTGGCCGCCGCTCACGGCTCGCGGCGACCACCGCCGTTGAAGCTGCAGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS GCA 72 bp GGCGGCCAAGGAGAACGGTCTCCGTTGCGCAGCGCGTaGTGTCCCTCCGGCACGGGCTGGAGGTGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GGQGERSPLRSA*CPSGTGWRWQS
Trigger: TGACTGCCACCTCCAGCCCGTGCCGGAGGGACAGCACGCGCTGCGCAACGGAGACCGTTCTCCTTGGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CAA 72 bp GCGCCGAGAGCGTGCCTCCTCCGCGGGATGAGCGCCTaGCAGGCTGCCTTTCCAGGGCTAAGATCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: APRACLLRGMSA*QAAFPGLRSPA
Trigger: CGCCGGGGATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTCATCCCGCGGAGGAGGCACGCTCTCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS CCA 72 bp GCAGGCTGCCTTTCCAGGGCTAAGATCCCCGGCGGCTaGAGAGTGCGCTCGGGCTGCCTGCTGCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: AGCLSRAKIPGG*RVRSGCLLHCP
Trigger: TGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGATCTTAGCCCTGGAAAGGCAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp AGCGTGCCTCCTCCGCGGGATGAGCGCCTTGCAGGCTaGCTTTCCAGGGCTAAGATCCCCGGCGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SVPPPRDERLAG*LSRAKIPGGWR
Trigger: TCTCCAGCCGCCGGGGATCTTAGCCCTGGAAAGGCAGCCTGCAAGGCGCTCATCCCGCGGAGGAGGCACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp TTTCTCTCCTTCCTCCCACCGAGCTCTTCATTCTCCTaGTGGCGGCCGCCCGGCGCCCTGGCCCTGGCATCC +
Preference number: 6 (lower is better)
Translates to: FLSFLPPSSSFS*WRPPGALALAS
Trigger: GGATGCCAGGGCCAGGGCGCCGGGCGGCCGCCAGCAGGAGAATGAAGAGCTCGGTGGGAGGAAGGAGAGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494108.2
ENST00000494118.5
CDS TCA 72 bp TACATTCGGTGGAAATGTCCCCGGCGTGGAGAGCAGTaGGCGCCGAGAGCGTGCCTCCTCCGCGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: YIRWKCPRRGEQ*APRACLLRGMS
Trigger: GCTCATCCCGCGGAGGAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTCCACCGAATGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS GCA 72 bp TCCCCGGCGGCTGGAGAGTGCGCTCGGGCTGCCTGCTaGACTGCCCATCCTTACTGTAATCCGACTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SPAAGECARAAC*TAHPYCNPTPP
Trigger: AGGAGGAGTCGGATTACAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp AGATCCCCGGCGGCTGGAGAGTGCGCTCGGGCTGCCTaGTGCACTGCCCATCCTTACTGTAATCCGACTCCT +
Preference number: 6 (lower is better)
Translates to: RSPAAGECARAA*CTAHPYCNPTP
Trigger: AGGAGTCGGATTACAGTAAGGATGGGCAGTGCAGCAGGCAGCCCGAGCGCACTCTCCAGCCGCCGGGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 72 bp AAGGAGCAAACAGCACAGGAGTGTGGGCGGTCCGAATaGGTCCAGGAGCTGGCCGCAGGAGTGCCGGAGGAA +
Preference number: 6 (lower is better)
Translates to: KEQTAQECGRSE*VQELAAGVPEE
Trigger: TTCCTCCGGCACTCCTGCGGCCAGCTCCTGGACCCATTCGGACCGCCCACACTCCTGTGCTGTTTGCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 72 bp CCTTTCATGCTACATTCGGTGGAAATGTCCCCGGCGTaGAGAGCAGTGAGCGCCGAGAGCGTGCCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: PFMLHSVEMSPA*RAVSAESVPPP
Trigger: CGGAGGAGGCACGCTCTCGGCGCTCACTGCTCTCCACGCCGGGGACATTTCCACCGAATGTAGCATGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000446749.1
CDS CCA 72 bp GCTGGCCGCAGGAGTGCCGGAGGAAGCGCGGAAGTCTaGAACAGTGTTGCTGCTGGAGCAGTTCGAAGACTG +
Preference number: 6 (lower is better)
Translates to: AGRRSAGGSAEV*NSVAAGAVRRL
Trigger: CAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTCCTGCGGCCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 72 bp CGCGAAGGGAGGGGCCCGCGGCCTCCTTTATCCTCCTaGTTTGGGTGCAGTACCAGACAACAACTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: REGRGPRPPLSS*FGCSTRQQLPP
Trigger: TGGGGGAAGTTGTTGTCTGGTACTGCACCCAAACCAGGAGGATAAAGGAGGCCGCGGGCCCCTCCCTTCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS CCA 72 bp AGGGAGGGGCCCGCGGCCTCCTTTATCCTCCTGGTTTaGGTGCAGTACCAGACAACAACTTCCCCCACACTC +
Preference number: 6 (lower is better)
Translates to: REGPAASFILLV*VQYQTTTSPTL
Trigger: GAGTGTGGGGGAAGTTGTTGTCTGGTACTGCACCCAAACCAGGAGGATAAAGGAGGCCGCGGGCCCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494108.2
CDS GCA 72 bp TGCCGGAGGAAGCGCGGAAGTCTGGAACAGTGTTGCTaGTGGAGCAGTTCGAAGACTGAAGGGGGAACTCAC +
Preference number: 6 (lower is better)
Translates to: CRRKRGSLEQCC*WSSSKTEGGTH
Trigger: GTGAGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp GAGTGCCGGAGGAAGCGCGGAAGTCTGGAACAGTGTTaGTGCTGGAGCAGTTCGAAGACTGAAGGGGGAACT +
Preference number: 6 (lower is better)
Translates to: ECRRKRGSLEQC*CWSSSKTEGGT
Trigger: AGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCGGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS CCA 72 bp TTTAATATCCAGCGATGGTTGCAAAGGAGGGGCTGGTaGACGGACAAGGGCCGGGAGAGCAGGACTCTGGCA +
Preference number: 6 (lower is better)
Translates to: FNIQRWLQRRGW*TDKGRESRTLA
Trigger: TGCCAGAGTCCTGCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS CCA 72 bp TGGTTTAATATCCAGCGATGGTTGCAAAGGAGGGGCTaGTGGACGGACAAGGGCCGGGAGAGCAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: WFNIQRWLQRRG*WTDKGRESRTL
Trigger: CAGAGTCCTGCTCTCCCGGCCCTTGTCCGTCCACCAGCCCCTCCTTTGCAACCATCGCTGGATATTAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS CCA 72 bp CGGAGGAAGCGCGGAAGTCTGGAACAGTGTTGCTGCTaGAGCAGTTCGAAGACTGAAGGGGGAACTCACTGC +
Preference number: 6 (lower is better)
Translates to: RRKRGSLEQCCC*SSSKTEGGTHC
Trigger: GCAGTGAGTTCCCCCTTCAGTCTTCGAACTGCTCCAGCAGCAACACTGTTCCAGACTTCCGCGCTTCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp AATCGCTGCATCTCACCACTGTTGTGCGCCTCCAGCTaGGAGGCAGAGTTGACAGCAACCTTGCATAGCGAA +
Preference number: 6 (lower is better)
Translates to: NRCISPLLCASS*EAELTATLHSE
Trigger: TTCGCTATGCAAGGTTGCTGTCAACTCTGCCTCGCAGCTGGAGGCGCACAACAGTGGTGAGATGCAGCGATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS GCA 72 bp GTTTTGTGCTTAGTACCACTGTTGTGCGCCTCCAGCTaGGAGGCAGAGTTGACAGCAACCTTGCATAGCGAA +
Preference number: 6 (lower is better)
Translates to: VLCLVPLLCASS*EAELTATLHSE
Trigger: TTCGCTATGCAAGGTTGCTGTCAACTCTGCCTCGCAGCTGGAGGCGCACAACAGTGGTACTAAGCACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281523.8
CDS GCA 72 bp CCTCAGTACTCAAGGAATGGCTTCGAAGCCATTCCTTaGTCTGCACTAAGACAAGCAGAGGGGCCATCCTAC +
Preference number: 6 (lower is better)
Translates to: PQYSRNGFEAIP*SALRQAEGPSY
Trigger: GTAGGATGGCCCCTCTGCTTGTCTTAGTGCAGAGCAAGGAATGGCTTCGAAGCCATTCCTTGAGTACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497570.1
CDS GCA 72 bp CGGGTCCATCGCATTGAAATTGGGGAAGAGGTTGACTaGAGCTGCAGTGTCAAGAGGAAAGGGAAGAAATGG +
Preference number: 6 (lower is better)
Translates to: RVHRIEIGEEVD*SCSVKRKGKKW
Trigger: CCATTTCTTCCCTTTCCTCTTGACACTGCAGCTGCAGTCAACCTCTTCCCCAATTTCAATGCGATGGACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS CAA 72 bp ACCTCAGTACTCAAGGAATGGCTTCGAAGCCATTCCTaGCTCTGCACTAAGACAAGCAGAGGGGCCATCCTA +
Preference number: 6 (lower is better)
Translates to: TSVLKEWLRSHS*LCTKTSRGAIL
Trigger: TAGGATGGCCCCTCTGCTTGTCTTAGTGCAGAGCAAGGAATGGCTTCGAAGCCATTCCTTGAGTACTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497570.1
CDS CAA 90 bp TACACAGAGACCTCAGTACTCAAGGAATGGCTTCGAAGCCATTCCTaGCTCTGCACTAAGACAAGCAGAGGGGCCATCCTACTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: YTETSVLKEWLRSHS*LCTKTSRGAILLFS
Trigger: GGAGAAAAGTAGGATGGCCCCTCTGCTTGTCTTAGTGCAGAGCAAGGAATGGCTTCGAAGCCATTCCTTGAGTACTGAGGTCTCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497570.1
CDS CAA 72 bp TTTCAGCGCATGGATCTTTCATGCCCCAGTCCATTGTaGGGAGGCTCCAGTGTGTTTGTACTACCTAATGGG +
Preference number: 6 (lower is better)
Translates to: FQRMDLSCPSPL*GGSSVFVLPNG
Trigger: CCCATTAGGTAGTACAAACACACTGGAGCCTCCCAACAATGGACTGGGGCATGAAAGATCCATGCGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS CAA 72 bp TGCTTTTGCGGATTTCCACAGTTGTCGTCGTTGATATaGCTGGTGTCCCTGCAGTACCGTCTCTTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: CFCGFPQLSSLI*LVSLQYRLLCR
Trigger: TCTGCACAAGAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS TCA 72 bp TTAATTCAGCCTCACTCTCGCCATCGTGTACACAGGTaGAATCTGTCTGTCTCCTCTCTCTCTCACAAGCAC +
Preference number: 6 (lower is better)
Translates to: LIQPHSRHRVHR*NLSVSSLSHKH
Trigger: GTGCTTGTGAGAGAGAGAGGAGACAGACAGATTTCACCTGTGTACACGATGGCGAGAGTGAGGCTGAATTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466511.1
CDS TCA 72 bp AACACTGCTTTTGCGGATTTCCACAGTTGTCGTCGTTaGTATTGCTGGTGTCCCTGCAGTACCGTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: NTAFADFHSCRR*YCWCPCSTVSC
Trigger: ACAAGAGACGGTACTGCAGGGACACCAGCAATATCAACGACGACAACTGTGGAAATCCGCAAAAGCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS GCA 72 bp TTAGGTTTCGGGGGCTTCCCAGCAGCTCTGTCTTTGTaGCTTCTACTGCTAATGTGCTGTTTAAGTTGCGTT +
Preference number: 6 (lower is better)
Translates to: LGFGGFPAALSL*LLLLMCCLSCV
Trigger: AACGCAACTTAAACAGCACATTAGCAGTAGAAGGCACAAAGACAGAGCTGCTGGGAAGCCCCCGAAACCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000467140.1
CDS TCA 72 bp TGCCACACAGACCAGACAGTGAATTTGTCAGCACCTTaGTCTTGGACTTCTCAGCCTCCGGAAATCAGAATT +
Preference number: 6 (lower is better)
Translates to: CHTDQTVNLSAP*SWTSQPPEIRI
Trigger: AATTCTGATTTCCGGAGGCTGAGAAGTCCAAGATCAAGGTGCTGACAAATTCACTGTCTGGTCTGTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS CAA 72 bp TATTTAGGTTTCGGGGGCTTCCCAGCAGCTCTGTCTTaGTGCCTTCTACTGCTAATGTGCTGTTTAAGTTGC +
Preference number: 6 (lower is better)
Translates to: YLGFGGFPAALS*CLLLLMCCLSC
Trigger: GCAACTTAAACAGCACATTAGCAGTAGAAGGCACAAAGACAGAGCTGCTGGGAAGCCCCCGAAACCTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281523.8
ENST00000467140.1
CDS CAA 72 bp TTTCCCCCTGTTTTGTCAGAGCTGGTATTGATGGTATaGGTAGTGATGGAGGTGAAGGTAGTCTTTGCGCTG +
Preference number: 6 (lower is better)
Translates to: FPPVLSELVLMV*VVMEVKVVFAL
Trigger: CAGCGCAAAGACTACCTTCACCTCCATCACTACCAATACCATCAATACCAGCTCTGACAAAACAGGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495739.1
CDS CAA 90 bp CGACATGCCACACAGACATCAGAATTAAATCTCAACTGGCAAATGTaGCATGATATGATTTGCTTTCTTCGGTGGGGAAGAGGAACCCCG +
Preference number: 6 (lower is better)
Translates to: RHATQTSELNLNWQM*HDMICFLRWGRGTP
Trigger: CGGGGTTCCTCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATGTCTGTGTGGCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469927.5
CDS TCA 72 bp AGAGGAACCCCGAATGTATGGTTTATTACAGCTTTCTaGATCGGGTCCATCGCATTGAAATTGGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RGTPNVWFITAF*IGSIALKLGKR
Trigger: CCTCTTCCCCAATTTCAATGCGATGGACCCGATTCAGAAAGCTGTAATAAACCATACATTCGGGGTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281523.8
ENST00000446749.1
ENST00000478967.5
ENST00000494108.2
CDS GCA 72 bp ATCTCCAAATACCTTGGCCATGTTCCTTTTACGACATaGCACACAGACCAGACAGTGAATTTGTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: ISKYLGHVPFTT*HTDQTVNLSAP
Trigger: AGGTGCTGACAAATTCACTGTCTGGTCTGTGTGGCATGTCGTAAAAGGAACATGGCCAAGGTATTTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478967.5
CDS CAA 90 bp AAGGCTTTGATAGTGCCACTTCCATTCCGGGCTTCTAACATGGTTTaGTGCTTAGTACCTATCAACTTTAAGCTCCAAGTCCTCAGTAGT +
Preference number: 6 (lower is better)
Translates to: KALIVPLPFRASNMV*CLVPINFKLQVLSS
Trigger: ACTACTGAGGACTTGGAGCTTAAAGTTGATAGGTACTAAGCACAAAACCATGTTAGAAGCCCGGAATGGAAGTGGCACTATCAAAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467140.1
CDS CAA 72 bp TGTGCCATATCAGAATTAAATCTCAACTGGCAAATGTaGCATGATATGATTTGCTTTCTTCGGTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: CAISELNLNWQM*HDMICFLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATATGGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446749.1
CDS CAA 72 bp ACACAGACATCAGAATTAAATCTCAACTGGCAAATGTaGCATGATATGATTTGCTTTCTTCGGTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: TQTSELNLNWQM*HDMICFLRWGR
Trigger: TCTTCCCCACCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGATTTAATTCTGATGTCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469927.5