RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF385C (Homo sapiens)

Ensembl gene IDs: ENSG00000187595

Ensembl transcript IDs: ENST00000436535.4, ENST00000453355.2, ENST00000461831.1, ENST00000496039.5, ENST00000618554.4, ENST00000649819.1

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATaGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGAC +
Preference number: 1 (lower is better)
Translates to: FWVPLSPPWSSVTLP*SPCPDSLEPAAARD
Trigger: GTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CCA 90 bp CTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTGGAGGAAAGTGAGAGCACCACATGG +
Preference number: 1 (lower is better)
Translates to: LARRGWLVEAKIPRV*PCGSWVEESESTTW
Trigger: CCATGTGGTGCTCTCACTTTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CCA 90 bp TGGCTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTaGGTGGAGGAAAGTGAGAGCACCACATGGCTGGGGCTGAGATTT +
Preference number: 1 (lower is better)
Translates to: WLVEAKIPRVWPCGS*VEESESTTWLGLRF
Trigger: AAATCTCAGCCCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR TCA 90 bp GTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTaGACCAGGGAGGCAGAGGCTGCATGCAGTGAGCCAAGATTGCAC +
Preference number: 1 (lower is better)
Translates to: VTPSILRLGLSASIT*TREAEAACSEPRLH
Trigger: GTGCAATCTTGGCTCACTGCATGCAGCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR TCA 90 bp GTTCAGGAAGTCAGAGAAAGGCTAAGAAGAAGAGCTTCTGAGGGATaGGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATC +
Preference number: 1 (lower is better)
Translates to: VQEVRERLRRRASEG*VTPSILRLGLSASI
Trigger: GATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACTCATCCCTCAGAAGCTCTTCTTCTTAGCCTTTCTCTGACTTCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCATCGGGCAGGACCCCTaGAGCTGTTCACAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: HSHGHLVLTALSLLQLETIGQDP*SCSQSL
Trigger: CAGGGACTGTGAACAGCTTCAGGGGTCCTGCCCGAT...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGTTGGGTGGAGGAAAGTaGGAGCACCACATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKLGGGK*EHHMAG
Trigger: CCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAA...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGCAGAGAGTCGTCCCCTaGCTAGGAGAGGATGGCTTG +
Preference number: 2 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKQRVVP*LGEDGL
Trigger: CAAGCCATCCTCTCCTAGCCAGGGGACGACTCTCTG...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTATTGGGTGGAGGAAAGTaGGAGCACCACATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLGGGK*EHHMAG
Trigger: CCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAA...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCAGAGAGTCGTCCCCTaGCTAGGAGAGGATGGCTTG +
Preference number: 2 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVQRVVP*LGEDGL
Trigger: CAAGCCATCCTCTCCTAGCCAGGGGACGACTCTCTG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CAA 90 bp CATGGTCCTCTGTCACACTCCCATGGTCACCTTGTCCTGACAGCCTaGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: HGPLSHSHGHLVLTA*SLLQLETPSLSPVK
Trigger: CTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTGTGACAGAGGACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGGCTGAGTCCATAGTCTaGGGGAGACCCACACCCGCC +
Preference number: 2 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMAESIV*GRPTPA
Trigger: GGCGGGTGTGGGTCTCCCTCAGACTATGGACTCAGC...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGTGGGGACAGTCCTTaGAAGGCAGCTGCCCTTAAA +
Preference number: 2 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLGGDSP*KAAALK
Trigger: TTTAAGGGCAGCTGCCTTCCAAGGACTGTCCCCACC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCATGTGGGTCTTGGGTaGAGGAAAGTGAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: HSHGHLVLTALSLLQLETHVGLG*RKVRAP
Trigger: TGGTGCTCTCACTTTCCTCCACCCAAGACCCACATG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATATTGGGTGGAGGAAAGTaGGAGCACCACATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LQLETPSLSPVKPQSLGILGGGK*EHHMAG
Trigger: CCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAA...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQGGDKE*LLGNQL
Trigger: GAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLKIPRV*PCGSWV
Trigger: CACCCAAGACCCACATGGCCAGACTCTAGGAATCTT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTGGGGTCTGTCAGGGTaGGAAATGCAGGCAAGCCTA +
Preference number: 2 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVWGLSG*EMQASL
Trigger: TAGGCTTGCCTGCATTTCCCACCCTGACAGACCCCA...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGTTTTGCATAGATCTTTaGGGTCTGTCAGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKFCIDL*GLSGWE
Trigger: TTCCCACCCTGACAGACCCCAAAGATCTATGCAAAA...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCTTTTGCATAGATCTTTaGGGTCTGTCAGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVFCIDL*GLSGWE
Trigger: TTCCCACCCTGACAGACCCCAAAGATCTATGCAAAA...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGCATGTGGGTCTTGGGTaGAGGAAAGTGAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMHVGLG*RKVRAP
Trigger: TGGTGCTCTCACTTTCCTCCACCCAAGACCCACATG...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTGGCTAGGAGAGGATaGCTTGTAGAAGCTAAGATT +
Preference number: 2 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLARRG*LVEAKI
Trigger: AATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMGGDKE*LLGNQL
Trigger: GAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCC...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMKIPRV*PCGSWV
Trigger: CACCCAAGACCCACATGGCCAGACTCTAGGAATCTT...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAGAGGCTGCATGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGRGCMQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCATGCAGCCTCT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGTGTTCACAGTCCCTGTaGCATGTAGGAAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMCSQSL*HVGNQG
Trigger: ACCTTGGTTTCCTACATGCCACAGGGACTGTGAACA...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCTGGGGTCTGTCAGGGTaGGAAATGCAGGCAAGCCTA +
Preference number: 2 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGWGLSG*EMQASL
Trigger: TAGGCTTGCCTGCATTTCCCACCCTGACAGACCCCA...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCTGTTCACAGTCCCTGTaGCATGTAGGAAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGCSQSL*HVGNQG
Trigger: ACCTTGGTTTCCTACATGCCACAGGGACTGTGAACA...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR GCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGACTGGGCCCATGAATaGCCAGAAGACTTAAGATTA +
Preference number: 2 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQDWAHE*PEDLRL
Trigger: TAATCTTAAGTCTTCTGGGCATTCATGGGCCCAGTC...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGACAAGGAGTGGCTATaGGGAAATCAGCTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQDKEWL*GNQLWP
Trigger: AGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTGCTGGGGCTGAGATTTaGCATAGATCTTTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: SPTTSLALPHLSTADRRTAGAEI*HRSLGS
Trigger: AGACCCCAAAGATCTATGCAAAATCTCAGCCCCAGC...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CCA 72 bp GAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTaGGTGGAGGAAAGTGAGAGCACCACATGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: EAKIPRVWPCGS*VEESESTTWLG
Trigger: CCCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGCTGGGGCTGAGATTTaGCATAGATCTTTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLAGAEI*HRSLGS
Trigger: AGACCCCAAAGATCTATGCAAAATCTCAGCCCCAGC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CCA 72 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTCTGGCCTCCCCATGAG +
Preference number: 3 (lower is better)
Translates to: KPRCLRTGGDKE*LLGNQLWPPHE
Trigger: CTCATGGGGAGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCATTTTGCATAGATCTTaGGGGTCTGTCAGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVILHRS*GSVRVG
Trigger: TCCCACCCTGACAGACCCCAAAGATCTATGCAAAAT...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGCTGATCGAAGGACTTTaGGGTCCCCCTTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMLIEGL*GPPFSS
Trigger: GGAGGAGAAAGGGGGACCCAAAAGTCCTTCGATCAG...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGACAAGGAGTGGCTATaGGGAAATCAGCTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEDKEWL*GNQLWP
Trigger: AGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR-3UTR CAA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCCTGATCGAAGGACTTTaGGGTCCCCCTTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGLIEGL*GPPFSS
Trigger: GGAGGAGAAAGGGGGACCCAAAAGTCCTTCGATCAG...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR TCA 72 bp GTCAGAGAAAGGCTAAGAAGAAGAGCTTCTGAGGGATaGGTTACTCCCTCAATATTAAGACTGGGCTTATCA +
Preference number: 3 (lower is better)
Translates to: VRERLRRRASEG*VTPSILRLGLS
Trigger: TGATAAGCCCAGTCTTAATATTGAGGGAGTAACTCATCCCTCAGAAGCTCTTCTTCTTAGCCTTTCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGCTTCCCACGGCAGCTaGCGCTGGCTCAGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLASHGS*RWLRPR
Trigger: CCGGGGCCTGAGCCAGCGGCAGCTGCCGTGGGAAGC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCACGGCAGCTGCCGCTaGCTCAGGCCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPHGSCR*LRPRCL
Trigger: GAGGCACCGGGGCCTGAGCCAGCGGCAGCTGCCGTG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACGGTGGGGAGCGGGCTaGGCAGGAAGCGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLRWGAG*AGSGLP
Trigger: TGGCAGCCCGCTTCCTGCCCAGCCCGCTCCCCACCG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCGGTGGGGAGCGGGCTaGGCAGGAAGCGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVRWGAG*AGSGLP
Trigger: TGGCAGCCCGCTTCCTGCCCAGCCCGCTCCCCACCG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAAAGTCCAGCGGGGGCTaGAGAGGCCGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLKSSGG*RGRVGR
Trigger: CCTGCCCACCCGGCCTCTGCAGCCCCCGCTGGACTT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618554.4
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTCACGGCAGCTGCCGCTaGCTCAGGCCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPHGSCR*LRPRCL
Trigger: GAGGCACCGGGGCCTGAGCCAGCGGCAGCTGCCGTG...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTATGGCAGTGGCTGCGGTaGGGAGCGGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLWQWLR*GAGWAG
Trigger: TCCTGCCCAGCCCGCTCCCCACCGCAGCCACTGCCA...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTGGCAGTGGCTGCGGTaGGGAGCGGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGWQWLR*GAGWAG
Trigger: TCCTGCCCAGCCCGCTCCCCACCGCAGCCACTGCCA...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGGGTGCGAAACAGAGCTaGGCCCAGGATGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKGAKQS*AQDGSR
Trigger: CCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACC...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCGCCCCGGCCCCCTGTaGCTCTCTTGGCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVRPGPL*LSWLCV
Trigger: GACACAAAGCCAAGAGAGTCACAGGGGGCCGGGGCG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTGCCCCATCCTGGGCCTaGGTGTGTGGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPAPSWA*VCGLCL
Trigger: CAAGCAGAGGCCACACACCCAGGCCCAGGATGGGGC...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGCCCCATCCTGGGCCTaGGTGTGTGGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVAPSWA*VCGLCL
Trigger: CAAGCAGAGGCCACACACCCAGGCCCAGGATGGGGC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCTCTCTCCCAGGCTCTaGGGAGCAAGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETLSPRL*GARWAG
Trigger: TCCTGCCCACCTTGCTCCCCAGAGCCTGGGAGAGAG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGCTTGCTGTGCTGGCTaGAGGGCTTGGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETACCAG*RAWGSS
Trigger: GGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCCGGTGGGGAGCGGGCTaGGCAGGAAGCGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVRWGAG*AGSGLP
Trigger: TGGCAGCCCGCTTCCTGCCCAGCCCGCTCCCCACCG...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTGAGGGCCAGGGGCCCTaGCAGAGCACAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPEGQGP*QSTDGS
Trigger: ACTGCCATCTGTGCTCTGCCAGGGCCCCTGGCCCTC...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGGTGCGAAACAGAGCTaGGCCCAGGATGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVGAKQS*AQDGSR
Trigger: CCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTGCGGACAGCTCCTGCTaGGGTGCGAAACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTADSSC*GAKQSW
Trigger: CCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGC...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGGCGAGCAAGTGCTTaGAGTCCAGCGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPRRASA*SPAGAA
Trigger: TGCAGCCCCCGCTGGACTTCAAGCACTTGCTCGCCT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618554.4
CDS-3UTR TCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGAGCATCCAAGAGCTCTaGGTGGGCTGGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKSIQEL*VGWLPA
Trigger: TGCAGGGAGCCAGCCCACTCAGAGCTCTTGGATGCT...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAATCGGGCAGGACCCCTaGAGCTGTTCACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQIGQDP*SCSQSL
Trigger: CAGGGACTGTGAACAGCTTCAGGGGTCCTGCCCGAT...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGCTGAGTCCATAGTCTaGGGGAGACCCACACCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVAESIV*GRPTPA
Trigger: GGCGGGTGTGGGTCTCCCTCAGACTATGGACTCAGC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAATGGAAGGCGAGCAAGTaGTTGAAGTCCAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQWKASK*LKSSGG
Trigger: GCCCCCGCTGGACTTCAAGCACTTGCTCGCCTTCCA...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGTGGGTGTGTGGCCTCTaGTTGCTCTTGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKWVCGL*LLLAAS
Trigger: CGAGGCTGCCAAGAGCAAGCAGAGGCCACACACCCA...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATATGGCTCAGGCCCCGGTaGCTCTCTCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIWLRPR*LSPRLW
Trigger: CCAGAGCCTGGGAGAGAGGCACCGGGGCCTGAGCCA...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTTCCCACGGCAGCTaGCGCTGGCTCAGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSASHGS*RWLRPR
Trigger: CCGGGGCCTGAGCCAGCGGCAGCTGCCGTGGGAAGC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCTTCCCCACTCATGCTaGTTCCCACGGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPLPHSC*FPRQLP
Trigger: CGGCAGCTGCCGTGGGAAGCAGCATGAGTGGGGAAG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTTCCCCACTCATGCTaGTTCCCACGGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLPHSC*FPRQLP
Trigger: CGGCAGCTGCCGTGGGAAGCAGCATGAGTGGGGAAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCTGCCTTCCCCACTCATaGTGCTTCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETCLPHS*CFPRQL
Trigger: CAGCTGCCGTGGGAAGCAGCATGAGTGGGGAAGGCA...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGCGTGCTTCTGCAGCTTaGTGTGCTGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKRASAA*CAGWRA
Trigger: AGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACG...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKSAACF*SLLCWL
Trigger: CAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCT...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAAGGGCGGACAGCTCCTaGTGGGGTGCGAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLRADSS*WGAKQS
Trigger: GCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGGGCGGACAGCTCCTaGTGGGGTGCGAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPRADSS*WGAKQS
Trigger: GCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGGGCCAGCGTTGGGATTaGGGACACTACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKGQRWD*GHYSPI
Trigger: GATGGGGCTGTAGTGTCCCCAATCCCAACGCTGGCC...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTCTCCAGGGGCTCCACTaGCCAGCGTTGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPLQGLH*PALGLG
Trigger: CCCCAATCCCAACGCTGGCCAGTGGAGCCCCTGGAG...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTGGTGGTGGCTGGAGTaGAGGCCCAAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRWWWLE*RPKRRG
Trigger: GCCCCTCCTCTTGGGCCTCCACTCCAGCCACCACCA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTGGTGGTGGCTGGAGTaGAGGCCCAAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGWWWLE*RPKRRG
Trigger: GCCCCTCCTCTTGGGCCTCCACTCCAGCCACCACCA...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTCTCTCCCAGGCTCTaGGGAGCAAGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLSPRL*GARWAG
Trigger: TCCTGCCCACCTTGCTCCCCAGAGCCTGGGAGAGAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTGGCAGTGGCTGCGGTaGGGAGCGGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVWQWLR*GAGWAG
Trigger: TCCTGCCCAGCCCGCTCCCCACCGCAGCCACTGCCA...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTGGTGCGAAACAGAGCTaGGCCCAGGATGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPGAKQS*AQDGSR
Trigger: CCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACC...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGCCCCACTACCTCCTTaGCTCTGCCCCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETAPLPP*LCPTLA
Trigger: TGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCTCCCATATTGTGGGGTaGGGAGGGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETSHIVG*GGGSAA
Trigger: TGCAGCACTGCCCCCTCCCCACCCCACAATATGGGA...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAATGTGTGGCCTCTGCTTaGTCTTGGCAGCCTCGACAG +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQCVASA*SWQPRQ
Trigger: CTGTCGAGGCTGCCAAGAGCAAGCAGAGGCCACACA...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGTGTGTGGCCTCTGCTTaGTCTTGGCAGCCTCGACAG +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKCVASA*SWQPRQ
Trigger: CTGTCGAGGCTGCCAAGAGCAAGCAGAGGCCACACA...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTGGCTCAGGCCCCGGTaGCTCTCTCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVWLRPR*LSPRLW
Trigger: CCAGAGCCTGGGAGAGAGGCACCGGGGCCTGAGCCA...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGCCAGGCGGTCTTTGTaGCTCCTGCTGCTCATGTGC +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLARRSL*LLLLMC
Trigger: GCACATGAGCAGCAGGAGGCACAAAGACCGCCTGGC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGCCAGGCGGTCTTTGTaGCTCCTGCTGCTCATGTGC +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVARRSL*LLLLMC
Trigger: GCACATGAGCAGCAGGAGGCACAAAGACCGCCTGGC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCGTGCTTCTGCAGCTTaGTGTGCTGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVRASAA*CAGWRA
Trigger: AGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLSAACF*SLLCWL
Trigger: CAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCTACCTCCTTGGCTCTaGCCCACCTTAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETLPPWL*PTLALL
Trigger: CAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTCTACCTCCTTGGCTCTaGCCCACCTTAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTLPPWL*PTLALL
Trigger: CAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAG...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGGGAGGGGGCAGTGCTaGAGTGGAAAGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETGRGQC*SGKEFV
Trigger: CACAAACTCCTTTCCACTGCAGCACTGCCCCCTCCC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCACTACAGCCCCATCCTaGGCCTGGGTGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGTTAPS*AWVCGL
Trigger: GAGGCCACACACCCAGGCCCAGGATGGGGCTGTAGT...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTTCCACTGGCCAGCGTTaGGATTGGGGACACTACAGC +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTSTGQR*DWGHYS
Trigger: GCTGTAGTGTCCCCAATCCCAACGCTGGCCAGTGGA...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCAGGGTCTGGAGTTGGTaGTGGCTGGAGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGRVWSW*WLEWRP
Trigger: GGGCCTCCACTCCAGCCACCACCAACTCCAGACCCT...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCTGTCACCTTACACGTaGGGCAGTAGAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETLSPYT*GSRGAP
Trigger: AGGGGCACCTCTACTGCCCCACGTGTAAGGTGACAG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCAGAGAGTCGTCCCCTaGCTAGGAGAGGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETQRVVP*LGEDGL
Trigger: CAAGCCATCCTCTCCTAGCCAGGGGACGACTCTCTG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACACTCAGCTTCACAGTaGCAGGGGCTGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQHSASQ*QGLVGR
Trigger: TCTCCCAACCAGCCCCTGCCACTGTGAAGCTGAGTG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCTCGGCCTGGTTCGCTaGGTTGAACCTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVLGLVR*VEPQVT
Trigger: TGTCACCTGAGGTTCAACTCAGCGAACCAGGCCGAG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTCGGCCTGGTTCGCTaGGTTGAACCTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLGLVR*VEPQVT
Trigger: TGTCACCTGAGGTTCAACTCAGCGAACCAGGCCGAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGCGCCCCGGCCCCCTGTaGCTCTCTTGGCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMRPGPL*LSWLCV
Trigger: GACACAAAGCCAAGAGAGTCACAGGGGGCCGGGGCG...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCTGCCAACGTCTTGGTaGGTTGCTTCTGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETLPTSW*VASARP
Trigger: TGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAGCTGAGTCCATAGTCTaGGGGAGACCCACACCCGCC +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIAESIV*GRPTPA
Trigger: GGCGGGTGTGGGTCTCCCTCAGACTATGGACTCAGC...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCTGGGTGTGTGGCCTCTaGTTGCTCTTGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGWVCGL*LLLAAS
Trigger: CGAGGCTGCCAAGAGCAAGCAGAGGCCACACACCCA...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTTGCCTTCCCCACTCATaGTGCTTCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPCLPHS*CFPRQL
Trigger: CAGCTGCCGTGGGAAGCAGCATGAGTGGGGAAGGCA...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCGCCCCTTCTCACTCCTaGCTTCCCCACTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGAPSHS*LPHSCC
Trigger: GCAGCATGAGTGGGGAAGGCAGGAGTGAGAAGGGGC...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTTCTGCAGCTTGCTGTaGTGGCTGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGFCSLL*WLEGLG
Trigger: CCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAA...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTTCTGCAGCTTGCTGTaGTGGCTGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRFCSLL*WLEGLG
Trigger: CCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCGGGCAGGAAGCGGGCTaGCAACGTCTTGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGGQEAG*QRLGEL
Trigger: CAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCC...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAACAGATGGCAGTGGCTaGGGTGGGGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEETDGSG*GGERAG
Trigger: CCCAGCCCGCTCCCCACCGCAGCCACTGCCATCTGT...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAACAGATGGCAGTGGCTaGGGTGGGGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSTDGSG*GGERAG
Trigger: CCCAGCCCGCTCCCCACCGCAGCCACTGCCATCTGT...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAAGGGCGGACAGCTCCTaGTGGGGTGCGAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIRADSS*WGAKQS
Trigger: GCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCT...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAACTCACAGCCAGCGCTaGGTGCTTCTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLTHSQR*VLLQLA
Trigger: AGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGAGGCAGAGGCTGCATaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQEAEAA*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCATGCAGCCTCTGCCTC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGCAGCGCCATTGAAGTaGAAGGCGAGCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQAAPLK*KASKCL
Trigger: CAAGCACTTGCTCGCCTTCCACTTCAATGGCGCTGC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGGCCAGCGTTGGGATTaGGGACACTACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRGQRWD*GHYSPI
Trigger: GATGGGGCTGTAGTGTCCCCAATCCCAACGCTGGCC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCCTGCATGTAGGGTCTaGAGTTGGTGGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPPACRV*SWWWLE
Trigger: CTCCAGCCACCACCAACTCCAGACCCTACATGCAGG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGGCTTGCTGTGCTGGCTaGAGGGCTTGGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWACCAG*RAWGSS
Trigger: GGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGC...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTGGTGGGGACAGTCCTTaGAAGGCAGCTGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTGGDSP*KAAALK
Trigger: TTTAAGGGCAGCTGCCTTCCAAGGACTGTCCCCACC...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAATGGGGTCTGTCAGGGTaGGAAATGCAGGCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQWGLSG*EMQASL
Trigger: TAGGCTTGCCTGCATTTCCCACCCTGACAGACCCCA...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCAGAGAGTCGTCCCCTaGCTAGGAGAGGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPQRVVP*LGEDGL
Trigger: CAAGCCATCCTCTCCTAGCCAGGGGACGACTCTCTG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCGCCCCACTACCTCCTTaGCTCTGCCCCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGAPLPP*LCPTLA
Trigger: TGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGC...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACCGCCCTCCAAGAGTTaGGGTTCAGGAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQPPSKS*GSGSQR
Trigger: TCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTCCCATATTGTGGGGTaGGGAGGGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGSHIVG*GGGSAA
Trigger: TGCAGCACTGCCCCCTCCCCACCCCACAATATGGGA...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCGCGGGGCAGCGCCATTaGAGTGGAAGGCGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVAGQRH*SGRRAS
Trigger: ACTTGCTCGCCTTCCACTTCAATGGCGCTGCCCCGC...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGCAGCCTCGACAGCCTTaGGTTTTCTGGCGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKQPRQP*VFWRVC
Trigger: ACAAACACGCCAGAAAACTCAAGGCTGTCGAGGCTG...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGAGCATCCAAGAGCTCTaGGTGGGCTGGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWSIQEL*VGWLPA
Trigger: TGCAGGGAGCCAGCCCACTCAGAGCTCTTGGATGCT...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAACGCCCCGGCCCCCTGTaGCTCTCTTGGCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEERPGPL*LSWLCV
Trigger: GACACAAAGCCAAGAGAGTCACAGGGGGCCGGGGCG...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGAATTGACCTGGAGCTaGCAGAGAGCACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQELTWS*QRAQWK
Trigger: CTTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGAATTGACCTGGAGCTaGCAGAGAGCACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETELTWS*QRAQWK
Trigger: CTTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTGCCAACGTCTTGGTaGGTTGCTTCTGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLPTSW*VASARP
Trigger: TGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGTGGAAGGCGAGCAAGTaGTTGAAGTCCAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWWKASK*LKSSGG
Trigger: GCCCCCGCTGGACTTCAAGCACTTGCTCGCCTTCCA...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATACGTGCTTCTGCAGCTTaGTGTGCTGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIRASAA*CAGWRA
Trigger: AGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACG...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAGGGCAGGAAGCGGGCTaGCAACGTCTTGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIGQEAG*QRLGEL
Trigger: CAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCC...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCACTCACAGCCAGCGCTaGGTGCTTCTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGTHSQR*VLLQLA
Trigger: AGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGT...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTGAGGCAGAGGCTGCATaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPEAEAA*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCATGCAGCCTCTGCCTC...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCCCAAGAGGAGGGGCTaGAGGAACTTTACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPPKRRG*RNFTLW
Trigger: CCACAGAGTAAAGTTCCTGCAGCCCCTCCTCTTGGG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCCAGGGGCTCCACTaGCCAGCGTTGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQLQGLH*PALGLG
Trigger: CCCCAATCCCAACGCTGGCCAGTGGAGCCCCTGGAG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCAGGGTCTGGAGTTGGTaGTGGCTGGAGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVRVWSW*WLEWRP
Trigger: GGGCCTCCACTCCAGCCACCACCAACTCCAGACCCT...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTGTAGGGTCTGGAGTTaGTGGTGGCTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRCRVWS*WWLEWR
Trigger: CCTCCACTCCAGCCACCACCAACTCCAGACCCTACA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGAGGGCCAGGGGCCCTaGCAGAGCACAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEEGQGP*QSTDGS
Trigger: ACTGCCATCTGTGCTCTGCCAGGGCCCCTGGCCCTC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGAGGGCCAGGGGCCCTaGCAGAGCACAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSEGQGP*QSTDGS
Trigger: ACTGCCATCTGTGCTCTGCCAGGGCCCCTGGCCCTC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCGCGGACAGCTCCTGCTaGGGTGCGAAACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVADSSC*GAKQSW
Trigger: CCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGC...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCTCATCCACCGGTGCTTaGCTCCTTCAGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETSSTGA*LLQFLL
Trigger: CAGCAAGAACTGAAGGAGCCAAGCACCGGTGGATGA...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461831.1
CDS-3UTR CCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACATGTGGGTCTTGGGTaGAGGAAAGTGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQHVGLG*RKVRAP
Trigger: TGGTGCTCTCACTTTCCTCCACCCAAGACCCACATG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTCATGTGGGTCTTGGGTaGAGGAAAGTGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTHVGLG*RKVRAP
Trigger: TGGTGCTCTCACTTTCCTCCACCCAAGACCCACATG...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTTCTGTCACACTCCCATaGTCACCTTGTCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTSVTLP*SPCPDS
Trigger: GCTGTCAGGACAAGGTGACCATGGGAGTGTGACAGA...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCCACTCAGCTTCACAGTaGCAGGGGCTGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGHSASQ*QGLVGR
Trigger: TCTCCCAACCAGCCCCTGCCACTGTGAAGCTGAGTG...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTCACTCAGCTTCACAGTaGCAGGGGCTGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPHSASQ*QGLVGR
Trigger: TCTCCCAACCAGCCCCTGCCACTGTGAAGCTGAGTG...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATATCCCATATTGTGGGGTaGGGAGGGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGISHIVG*GGGSAA
Trigger: TGCAGCACTGCCCCCTCCCCACCCCACAATATGGGA...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGATACAGGGGGATACTaGCAGGGTCCCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETDTGGY*QGPILW
Trigger: CCACAATATGGGACCCTGCCAGTATCCCCCTGTATC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
3UTR CAA 72 bp CTGTCACACTCCCATGGTCACCTTGTCCTGACAGCCTaGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCT +
Preference number: 4 (lower is better)
Translates to: LSHSHGHLVLTA*SLLQLETPSLS
Trigger: AGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCGGGGCAGCGCCATTaGAGTGGAAGGCGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSAGQRH*SGRRAS
Trigger: ACTTGCTCGCCTTCCACTTCAATGGCGCTGCCCCGC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACTTCAGTTGGGTCTCTaGATTGACCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQLQLGL*IDLELT
Trigger: TGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCATCGGGCAGGACCCCTaGAGCTGTTCACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVIGQDP*SCSQSL
Trigger: CAGGGACTGTGAACAGCTTCAGGGGTCCTGCCCGAT...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGATCGGGCAGGACCCCTaGAGCTGTTCACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMIGQDP*SCSQSL
Trigger: CAGGGACTGTGAACAGCTTCAGGGGTCCTGCCCGAT...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGTTGGGTGGAGGAAAGTaGGAGCACCACATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWLGGGK*EHHMAG
Trigger: CCCAGCCATGTGGTGCTCTCACTTTCCTCCACCCAA...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGAGGCTGCATGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRRGCMQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCATGCAGCCTCT...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTATCAGCAAGTATCACTTaGACCAGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLSASIT*TREAEA
Trigger: AGCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGA...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTCTTGCCAGTGCATGTaGGACTGCCTCCCAACACTC +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRSCQCM*DCLPTL
Trigger: GAGTGTTGGGAGGCAGTCTCACATGCACTGGCAAGA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGGCCCCTTCTCACTCCTaGCTTCCCCACTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMAPSHS*LPHSCC
Trigger: GCAGCATGAGTGGGGAAGGCAGGAGTGAGAAGGGGC...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCTTTGTGCCTCCTGCTaGTCATGTGCTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETLCASC*SCAASV
Trigger: AACTGAAGCAGCACATGAGCAGCAGGAGGCACAAAG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGTTCTGCAGCTTGCTGTaGTGGCTGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMFCSLL*WLEGLG
Trigger: CCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAA...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCGGGCAGGAAGCGGGCTaGCAACGTCTTGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVGQEAG*QRLGEL
Trigger: CAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCC...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCACAGATGGCAGTGGCTaGGGTGGGGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGTDGSG*GGERAG
Trigger: CCCAGCCCGCTCCCCACCGCAGCCACTGCCATCTGT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGGAAGAGGGTAGTGGCTaGTGTAGGGGCAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQEEGSG*CRGRAE
Trigger: CTCCGCCCTGCCCCTACAGCAGCCACTACCCTCTTC...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGACAGCCAGCGCTGCGTaGTTCTGCAGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMTASAA*FCSLLC
Trigger: GCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTGT...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGACTCACAGCCAGCGCTaGGTGCTTCTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWTHSQR*VLLQLA
Trigger: AGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGT...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGCAGCGCCATTGAAGTaGAAGGCGAGCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRAAPLK*KASKCL
Trigger: CAAGCACTTGCTCGCCTTCCACTTCAATGGCGCTGC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTCTGATGACAGCTTTCTaGACCGGGTCCATCGTGCTG +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPLMTAF*TGSIVL
Trigger: CAGCACGATGGACCCGGTCCAGAAAGCTGTCATCAG...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGTGTAGGGTCTGGAGTTaGTGGTGGCTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWCRVWS*WWLEWR
Trigger: CCTCCACTCCAGCCACCACCAACTCCAGACCCTACA...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTTCCAAGAGCTCTGAGTaGGCTGGCTCCCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPSKSSE*AGSLHV
Trigger: TACATGCAGGGAGCCAGCCCACTCAGAGCTCTTGGA...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTTGCTGTGCTGGCTaGAGGGCTTGGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSACCAG*RAWGSS
Trigger: GGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCGGACAGCTCCTGCTaGGGTGCGAAACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSADSSC*GAKQSW
Trigger: CCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTGGDKE*LLGNQL
Trigger: GAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCC...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGGTGGGGACAGTCCTTaGAAGGCAGCTGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRGGDSP*KAAALK
Trigger: TTTAAGGGCAGCTGCCTTCCAAGGACTGTCCCCACC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTGGGGTCTGTCAGGGTaGGAAATGCAGGCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRWGLSG*EMQASL
Trigger: TAGGCTTGCCTGCATTTCCCACCCTGACAGACCCCA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKKIPRV*PCGSWV
Trigger: CACCCAAGACCCACATGGCCAGACTCTAGGAATCTT...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATACAGAGAGTCGTCCCCTaGCTAGGAGAGGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIQRVVP*LGEDGL
Trigger: CAAGCCATCCTCTCCTAGCCAGGGGACGACTCTCTG...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGGACCAGTTTGGAGTaGGAAGCTGTAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPRTSLE*EAVGES
Trigger: GCTTTCCCCTACAGCTTCCCACTCCAAACTGGTCCT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCGGGGCAGTGCTGCAGTaGAAAGGAGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: HSHGHLVLTALSLLQLETGAVLQ*KGVCDI
Trigger: AATGTCACAAACTCCTTTCCACTGCAGCACTGCCCC...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGGGGGCAGTGCTGCAGTaGAAAGGAGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKGAVLQ*KGVCDI
Trigger: AATGTCACAAACTCCTTTCCACTGCAGCACTGCCCC...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGATACAGGGGGATACTaGCAGGGTCCCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVDTGGY*QGPILW
Trigger: CCACAATATGGGACCCTGCCAGTATCCCCCTGTATC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGGAACTTTACTCTGTaGCTCTCCAGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPRNFTL*LSRGST
Trigger: AGTGGAGCCCCTGGAGAGCCACAGAGTAAAGTTCCT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCGTTGGGTCTCTGAATTaGCCTGGAGCTGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGVGSLN*PGADRE
Trigger: CTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAAC...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAAGAGGCTGCATGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIRGCMQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCATGCAGCCTCT...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCTCAGCAAGTATCACTTaGACCAGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGSASIT*TREAEA
Trigger: AGCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGA...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTGCTGCTCATGTGCTaGTTCAGTTGGGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLLLMC*FSWVSE
Trigger: TTCAGAGACCCAACTGAAGCAGCACATGAGCAGCAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGCCAGGCGGTCTTTGTaGCTCCTGCTGCTCATGTGC +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEARRSL*LLLLMC
Trigger: GCACATGAGCAGCAGGAGGCACAAAGACCGCCTGGC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAGAGGCAGAGGCTGCATaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIEAEAA*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCATGCAGCCTCTGCCTC...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTTGTTCACAGTCCCTGTaGCATGTAGGAAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTCSQSL*HVGNQG
Trigger: ACCTTGGTTTCCTACATGCCACAGGGACTGTGAACA...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGCCCCACTACCTCCTTaGCTCTGCCCCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEAPLPP*LCPTLA
Trigger: TGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGGACCAGTTTGGAGTaGGAAGCTGTAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRRTSLE*EAVGES
Trigger: GCTTTCCCCTACAGCTTCCCACTCCAAACTGGTCCT...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCGATACAGGGGGATACTaGCAGGGTCCCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGDTGGY*QGPILW
Trigger: CCACAATATGGGACCCTGCCAGTATCCCCCTGTATC...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGGTTGGGTCTCTGAATTaGCCTGGAGCTGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWVGSLN*PGADRE
Trigger: CTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAAC...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGTCTTGCCAGTGCATGTaGGACTGCCTCCCAACACTC +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMSCQCM*DCLPTL
Trigger: GAGTGTTGGGAGGCAGTCTCACATGCACTGGCAAGA...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCCTTTGTGCCTCCTGCTaGTCATGTGCTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGLCASC*SCAASV
Trigger: AACTGAAGCAGCACATGAGCAGCAGGAGGCACAAAG...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCGAAGAGGGTAGTGGCTaGTGTAGGGGCAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGEEGSG*CRGRAE
Trigger: CTCCGCCCTGCCCCTACAGCAGCCACTACCCTCTTC...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAATTGGTGAGTTGCTTCTaGAAGGCCAGTTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQLVSCF*KASLDL
Trigger: CAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAA...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTTTGGTGAGTTGCTTCTaGAAGGCCAGTTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTLVSCF*KASLDL
Trigger: CAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAA...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGGGAGGGGGCAGTGCTaGAGTGGAAAGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEGRGQC*SGKEFV
Trigger: CACAAACTCCTTTCCACTGCAGCACTGCCCCCTCCC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAGGGACACCAAACGTGTaGCTGATGACAGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIGTPNV*LMTAFW
Trigger: CCAGAAAGCTGTCATCAGCCACACGTTTGGTGTCCC...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCACTACAGCCCCATCCTaGGCCTGGGTGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGTTAPS*AWVCGL
Trigger: GAGGCCACACACCCAGGCCCAGGATGGGGCTGTAGT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAACCTGCATGTAGGGTCTaGAGTTGGTGGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEPACRV*SWWWLE
Trigger: CTCCAGCCACCACCAACTCCAGACCCTACATGCAGG...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGTCCAAGAGCTCTGAGTaGGCTGGCTCCCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMSKSSE*AGSLHV
Trigger: TACATGCAGGGAGCCAGCCCACTCAGAGCTCTTGGA...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTGTCACCTTACACGTaGGGCAGTAGAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQLSPYT*GSRGAP
Trigger: AGGGGCACCTCTACTGCCCCACGTGTAAGGTGACAG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVSGQEETRSGYWEISSGGGDKE*LLGNQL
Trigger: GAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCC...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGGAGGAGACAAGGAGTaGCTATTGGGAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRGGDKE*LLGNQL
Trigger: GAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCATGTGGGTCTTGGGTaGAGGAAAGTGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWHVGLG*RKVRAP
Trigger: TGGTGCTCTCACTTTCCTCCACCCAAGACCCACATG...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGKIPRV*PCGSWV
Trigger: CACCCAAGACCCACATGGCCAGACTCTAGGAATCTT...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTCTGGCTAGGAGAGGATaGCTTGTAGAAGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTLARRG*LVEAKI
Trigger: AATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAG...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGCTGGCTAGGAGAGGATaGCTTGTAGAAGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKLARRG*LVEAKI
Trigger: AATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAG...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGCCGCCCTCCAAGAGTTaGGGTTCAGGAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMPPSKS*GSGSQR
Trigger: TCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGG...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGGGGCAGTGCTGCAGTaGAAAGGAGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRGAVLQ*KGVCDI
Trigger: AATGTCACAAACTCCTTTCCACTGCAGCACTGCCCC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGAGGAACTTTACTCTGTaGCTCTCCAGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWRNFTL*LSRGST
Trigger: AGTGGAGCCCCTGGAGAGCCACAGAGTAAAGTTCCT...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCCCTGGTTCGCTGAGTTaGACCTCAGGTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVPGSLS*TSGDRC
Trigger: ACATCTGTCACCTGAGGTTCAACTCAGCGAACCAGG...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCGAATTGACCTGGAGCTaGCAGAGAGCACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVELTWS*QRAQWK
Trigger: CTTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTC...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTGCCAACGTCTTGGTaGGTTGCTTCTGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQLPTSW*VASARP
Trigger: TGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAAGAGGCTGCATGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEERGCMQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCATGCAGCCTCT...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCATCTTGCCAGTGCATGTaGGACTGCCTCCCAACACTC +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSSCQCM*DCLPTL
Trigger: GAGTGTTGGGAGGCAGTCTCACATGCACTGGCAAGA...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCTGCTGCTCATGTGCTaGTTCAGTTGGGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWLLLMC*FSWVSE
Trigger: TTCAGAGACCCAACTGAAGCAGCACATGAGCAGCAG...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPNVLVS*FCKASL
Trigger: TAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLNVLVS*FCKASL
Trigger: TAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTT...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCCCAAGAGGAGGGGCTaGAGGAACTTTACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQPKRRG*RNFTLW
Trigger: CCACAGAGTAAAGTTCCTGCAGCCCCTCCTCTTGGG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAACTGATGACAGCTTTCTaGACCGGGTCCATCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEELMTAF*TGSIVL
Trigger: CAGCACGATGGACCCGGTCCAGAAAGCTGTCATCAG...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCATCATCCACCGGTGCTTaGCTCCTGTGTTGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSSSTGA*LLCCEP
Trigger: AGGCTCACAACACAGGAGCCAAGCACCGGTGGATGA...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAATCATCCACCGGTGCTTaGCTCCTGTGTTGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEESSTGA*LLCCEP
Trigger: AGGCTCACAACACAGGAGCCAAGCACCGGTGGATGA...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTATTAAAACAAAACCCTaGGCCCAACCAGAACATCAC +
Preference number: 4 (lower is better)
Translates to: SPTTSLALPHLSTADRRTIKTKP*AQPEHH
Trigger: GTGATGTTCTGGTTGGGCCCAGGGTTTTGTTTTAAT...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCCGCCCTCCAAGAGTTaGGGTTCAGGAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQPPSKS*GSGSQR
Trigger: TCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGAGGACCAGTTTGGAGTaGGAAGCTGTAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMRTSLE*EAVGES
Trigger: GCTTTCCCCTACAGCTTCCCACTCCAAACTGGTCCT...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGGAGTTGAACCTCAGGTaGCAGATGTTACAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRELNLR*QMLQEM
Trigger: CATTTCCTGTAACATCTGTCACCTGAGGTTCAACTC...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCAGCCTCGACAGCCTTaGGTTTTCTGGCGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQQPRQP*VFWRVC
Trigger: ACAAACACGCCAGAAAACTCAAGGCTGTCGAGGCTG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCATCAGCAAGTATCACTTaGACCAGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSSASIT*TREAEA
Trigger: AGCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGA...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCTCCACTGGCCAGCGTTaGGATTGGGGACACTACAGC +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGSTGQR*DWGHYS
Trigger: GCTGTAGTGTCCCCAATCCCAACGCTGGCCAGTGGA...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTTTTGCATAGATCTTTaGGGTCTGTCAGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGFCIDL*GLSGWE
Trigger: TTCCCACCCTGACAGACCCCAAAGATCTATGCAAAA...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCAAGATTCCTAGAGTCTaGCCATGTGGGTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVKIPRV*PCGSWV
Trigger: CACCCAAGACCCACATGGCCAGACTCTAGGAATCTT...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCATCTGTCACACTCCCATaGTCACCTTGTCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSSVTLP*SPCPDS
Trigger: GCTGTCAGGACAAGGTGACCATGGGAGTGTGACAGA...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGTCTGTCACACTCCCATaGTCACCTTGTCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQSVTLP*SPCPDS
Trigger: GCTGTCAGGACAAGGTGACCATGGGAGTGTGACAGA...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTATTAAAACAAAACCCTaGGCCCAACCAGAACATCAC +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPIKTKP*AQPEHH
Trigger: GTGATGTTCTGGTTGGGCCCAGGGTTTTGTTTTAAT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGATGTTACAGGAAATaGACAGCTTCTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPRCYRK*TASSSE
Trigger: CTCTGAAGAAGAAGCTGTTCATTTCCTGTAACATCT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCACTTCAGTTGGGTCTCTaGATTGACCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSLQLGL*IDLELT
Trigger: TGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAG...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCAGAGCTTCTGAGGGATaGGTTACTCCCTCAATATTA +
Preference number: 4 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGRASEG*VTPSIL
Trigger: TAATATTGAGGGAGTAACTCATCCCTCAGAAGCTCT...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGCTGAGTCCATAGTCTaGGGGAGACCCACACCCGCC +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQAESIV*GRPTPA
Trigger: GGCGGGTGTGGGTCTCCCTCAGACTATGGACTCAGC...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAATCCATCATCCACCGGTaGTTGGCTCCTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEESIIHR*LAPSVL
Trigger: AAGAACTGAAGGAGCCAAGCACCGGTGGATGATGGA...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461831.1
CDS-3UTR CCA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATACTGGCTAGGAGAGGATaGCTTGTAGAAGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: LQLETPSLSPVKPQSLGILARRG*LVEAKI
Trigger: AATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAG...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCCCTGGTTCGCTGAGTTaGACCTCAGGTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGPGSLS*TSGDRC
Trigger: ACATCTGTCACCTGAGGTTCAACTCAGCGAACCAGG...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTTGACATTGACAGCATaGAAATGGGTCTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVLTLTA*KWVLPV
Trigger: CACTGGCAAGACCCATTTTCATGCTGTCAATGTCAA...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGTTGACATTGACAGCATaGAAATGGGTCTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMLTLTA*KWVLPV
Trigger: CACTGGCAAGACCCATTTTCATGCTGTCAATGTCAA...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQSAACF*SLLCWL
Trigger: CAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCT...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGACAGCCAGCGCTGCGTaGTTCTGCAGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQTASAA*FCSLLC
Trigger: GCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTGT...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCGACTGGGCCCATGAATaGCCAGAAGACTTAAGATTA +
Preference number: 4 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVDWAHE*PEDLRL
Trigger: TAATCTTAAGTCTTCTGGGCATTCATGGGCCCAGTC...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCATGTTCACAGTCCCTGTaGCATGTAGGAAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSCSQSL*HVGNQG
Trigger: ACCTTGGTTTCCTACATGCCACAGGGACTGTGAACA...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGGAGTTGAACCTCAGGTaGCAGATGTTACAGGAAATG +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQELNLR*QMLQEM
Trigger: CATTTCCTGTAACATCTGTCACCTGAGGTTCAACTC...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCCTTCAGTTGGGTCTCTaGATTGACCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGLQLGL*IDLELT
Trigger: TGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAG...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCCTGCTGCTCATGTGCTaGTTCAGTTGGGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGLLLMC*FSWVSE
Trigger: TTCAGAGACCCAACTGAAGCAGCACATGAGCAGCAG...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCCTTTGTGCCTCCTGCTaGTCATGTGCTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGLCASC*SCAASV
Trigger: AACTGAAGCAGCACATGAGCAGCAGGAGGCACAAAG...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAATTGGTGAGTTGCTTCTaGAAGGCCAGTTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEELVSCF*KASLDL
Trigger: CAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAA...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGCTACCTCCTTGGCTCTaGCCCACCTTAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQLPPWL*PTLALL
Trigger: CAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAG...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGACTGGGCCCATGAATaGCCAGAAGACTTAAGATTA +
Preference number: 4 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSDWAHE*PEDLRL
Trigger: TAATCTTAAGTCTTCTGGGCATTCATGGGCCCAGTC...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGACTGGGCCCATGAATaGCCAGAAGACTTAAGATTA +
Preference number: 4 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEDWAHE*PEDLRL
Trigger: TAATCTTAAGTCTTCTGGGCATTCATGGGCCCAGTC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CCA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGTTTTGCATAGATCTTTaGGGTCTGTCAGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQFCIDL*GLSGWE
Trigger: TTCCCACCCTGACAGACCCCAAAGATCTATGCAAAA...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGTTGGGTCTCTGAATTaGCCTGGAGCTGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQVGSLN*PGADRE
Trigger: CTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAAC...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCTTGACATTGACAGCATaGAAATGGGTCTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGLTLTA*KWVLPV
Trigger: CACTGGCAAGACCCATTTTCATGCTGTCAATGTCAA...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR GCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGNVLVS*FCKASL
Trigger: TAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAGAGCTTCTGAGGGATaGGTTACTCCCTCAATATTA +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGRASEG*VTPSIL
Trigger: TAATATTGAGGGAGTAACTCATCCCTCAGAAGCTCT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAGATGTTACAGGAAATaGACAGCTTCTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGRCYRK*TASSSE
Trigger: CTCTGAAGAAGAAGCTGTTCATTTCCTGTAACATCT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR TCA 90 bp AGTTACTCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGAGAGCTTCTGAGGGATaGGTTACTCCCTCAATATTA +
Preference number: 4 (lower is better)
Translates to: SYSLNIKTGLISKYHLNQRASEG*VTPSIL
Trigger: TAATATTGAGGGAGTAACTCATCCCTCAGAAGCTCT...CTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGAGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp AGGGGCAAGGACGATAGGTCCTGTGGCAGGGCGGACAGCTCCTGCTaGGGTGCGAAACAGAGCTGGGCCCAGGATGGGAGCCGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RGKDDRSCGRADSSC*GAKQSWAQDGSREE
Trigger: CTCTTCCCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCTGCCACAGGACCTATCGTCCTTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS TCA 90 bp CACAGACTGGGTCCTCACCCTGGGGTAGGCCCTGGGAAGGGGAGGTaGGTCTTGGCCTTTGCCCTTAATTGGCCCACTGGCCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: HRLGPHPGVGPGKGR*VLAFALNWPTGLLA
Trigger: GGCCAGCAGGCCAGTGGGCCAATTAAGGGCAAAGGCCAAGACTCACCTCCCCTTCCCAGGGCCTACCCCAGGGTGAGGACCCAGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS GCA 90 bp ATAAGGGGCAAGGACGATAGGTCCTGTGGCAGGGCGGACAGCTCCTaGTGGGGTGCGAAACAGAGCTGGGCCCAGGATGGGAGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: IRGKDDRSCGRADSS*WGAKQSWAQDGSRE
Trigger: TTCCCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCTGCCACAGGACCTATCGTCCTTGCCCCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp GGGAGCGGGCTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTAGAAGCCAGCGCTGCGTGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GSGLGRKRAANVLVS*FCKASLEASAACFC
Trigger: GCAGAAGCACGCAGCGCTGGCTTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAGCCCGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS CCA 90 bp CTCAGCAGCTCCAGATATGGGGGTCTCCTTCTCAGCCGGTGGGGGTaGGCTCAGTGGCCGCTTCATATCTCAGCCTCCCAAAGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSSSRYGGLLLSRWG*AQWPLHISASQSAG
Trigger: CCCAGCGCTTTGGGAGGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGAGCTGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 90 bp GCCAGTTTAGACTTGAGGATACTCACAGCCAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTGGAGGGCTTGGGGGTCTTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: ASLDLRILTASAACF*SLLCWLEGLGVFPA
Trigger: GGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGTATCCTCAAGTCTAAACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp GAGGCACTCAGCAGCTCCAGATATGGGGGTCTCCTTCTCAGCCGGTaGGGGTGGGCTCAGTGGCCGCTTCATATCTCAGCCTCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: EALSSSRYGGLLLSR*GWAQWPLHISASQS
Trigger: GCTTTGGGAGGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGAGCTGCTGAGTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGTGCTGGCTGGAGGGCTaGGGGGTCTTCCCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRCWLEG*GVFPAR
Trigger: CCTGGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCA...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTAAGGCGAGCAAGTGCTaGAAGTCCAGCGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SPTTSLALPHLSTADRRTKASKC*KSSGGC
Trigger: GCAGCCCCCGCTGGACTTCAAGCACTTGCTCGCCTT...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618554.4
CDS-3UTR CAA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGGGCCTCTGCTTGCTCTaGGCAGCCTCGACAGCCTTG +
Preference number: 5 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKGLCLL*AASTAL
Trigger: CAAGGCTGTCGAGGCTGCCAAGAGCAAGCAGAGGCC...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp TCCATGTTCCGAGGCTCAGCCCCCTCTTCCTTCAGGAGACTTTCCTaGTGCCCCCAGGGACTGCAGCTTTGCCTTTGTGCCCTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: SMFRGSAPSSFRRLS*CPQGLQLCLCALRV
Trigger: TACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGTCTCCTGAAGGAAGAGGGGGCTGAGCCTCGGAACATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 90 bp GGGAGCGGGCTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTAGACTTGAGGATACTCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GSGLGRKRAANVLVS*FCKASLDLRILTAS
Trigger: GCTGGCTGTGAGTATCCTCAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAGCCCGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp TCCAGATATGGGGGTCTCCTTCTCAGCCGGTGGGGGTGGGCTCAGTaGCCGCTTCATATCTCAGCCTCCCAAAGCGCTGGGATTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SRYGGLLLSRWGWAQ*PLHISASQSAGISG
Trigger: ACCTGAAATCCCAGCGCTTTGGGAGGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGCCTCTGCTTGCTCTaGGCAGCCTCGACAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLGLCLL*AASTAL
Trigger: CAAGGCTGTCGAGGCTGCCAAGAGCAAGCAGAGGCC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCTGGCCAGCGTTGGGATaGGGGACACTACAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: HSHGHLVLTALSLLQLETWPALG*GTLQPH
Trigger: ATGGGGCTGTAGTGTCCCCAATCCCAACGCTGGCCA...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGGTGACTCTCTTGGCTTaGTGTCCGGCACCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKVTLLA*CPAPPL
Trigger: CAGGGGAGGTGCCGGACACAAAGCCAAGAGAGTCAC...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACCCCCTGTGACTCTCTaGGCTTTGTGTCCGGCACCT +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQPPVTL*ALCPAP
Trigger: AGGTGCCGGACACAAAGCCAAGAGAGTCACAGGGGG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCTGCTGGCTGGAGGGCTaGGGGGTCTTCCCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVCWLEG*GVFPAR
Trigger: CCTGGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCA...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGCCCGCCCTCCAAGAGTaGGGGTTCAGGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKPALQE*GFRKSE
Trigger: CTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGG...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp TGCAAGGCCAGTTTAGACTTGAGGATACTCACAGCCAGCGCTGCGTaGTTCTGCAGCTTGCTGTGCTGGCTGGAGGGCTTGGGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: CKASLDLRILTASAA*FCSLLCWLEGLGVF
Trigger: GAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGTATCCTCAAGTCTAAACTGGCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCTCCATCGTGCTGAAGTaGGGGAAGAGACTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: HSHGHLVLTALSLLQLETSIVLK*GKRLSG
Trigger: CCCGCTCAGTCTCTTCCCCAACTTCAGCACGATGGA...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACCCCCTGTGACTCTCTaGGCTTTGTGTCCGGCACCT +
Preference number: 5 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLPPVTL*ALCPAP
Trigger: AGGTGCCGGACACAAAGCCAAGAGAGTCACAGGGGG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCCCCCTGTGACTCTCTaGGCTTTGTGTCCGGCACCT +
Preference number: 5 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPPPVTL*ALCPAP
Trigger: AGGTGCCGGACACAAAGCCAAGAGAGTCACAGGGGG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACGGGCTGCCAACGTCTaGGTGAGTTGCTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQRAANV*VSCFCK
Trigger: CTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCCCGCCCTCCAAGAGTaGGGGTTCAGGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPPALQE*GFRKSE
Trigger: CTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAAGCGGGGCAGCGCCATaGAAGTGGAAGGCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LQLETPSLSPVKPQSLGISGAAP*KWKASK
Trigger: CTTGCTCGCCTTCCACTTCAATGGCGCTGCCCCGCT...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTTGGCCAGCGTTGGGATaGGGGACACTACAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPWPALG*GTLQPH
Trigger: ATGGGGCTGTAGTGTCCCCAATCCCAACGCTGGCCA...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCCTCCACTGGCCAGCGTaGGGATTGGGGACACTACAG +
Preference number: 5 (lower is better)
Translates to: GVSGQEETRSGYWEISSGLHWPA*GLGTLQ
Trigger: CTGTAGTGTCCCCAATCCCAACGCTGGCCAGTGGAG...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGCGTGACTCTCTTGGCTTaGTGTCCGGCACCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GVSGQEETRSGYWEISSGVTLLA*CPAPPL
Trigger: CAGGGGAGGTGCCGGACACAAAGCCAAGAGAGTCAC...GCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCCTTGTCCTGACAGCCTaGAGCCTGCTGCAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVLVLTA*SLLQLE
Trigger: CTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAG...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTCTTGTCCTGACAGCCTaGAGCCTGCTGCAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPLVLTA*SLLQLE
Trigger: CTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAG...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGCCCCACTACCTCCTTGGCTCTGCCCCACCTTAGCACTGCTGATCGAAGGACTCTGATCGAAGGACTTTaGGGTCCCCCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPTTSLALPHLSTADRRTLIEGL*GPPFSS
Trigger: GGAGGAGAAAGGGGGACCCAAAAGTCCTTCGATCAG...AGTCCTTCGATCAGCAGTGCTAAGGTGGGGCAGAGCCAAGGAGGTAGTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp TCTGAAAGCCTGTGGCTACCAGGAGGCTCCAGGCTGGAGAAGTGCTaGTTAGGAGTCCTGATCCCAAAAGATCCCACAGGGAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SESLWLPGGSRLEKC*LGVLIPKDPTGRVP
Trigger: GGGAACTCTCCCTGTGGGATCTTTTGGGATCAGGACTCCTAAGCAGCACTTCTCCAGCCTGGAGCCTCCTGGTAGCCACAGGCTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 90 bp GGAGGCATTCACCCATTTCCCCCAGAAATCTGCCTTGCAGCCAGCTaGCCCTTCCAAGCTCATAGCCAAACCTCTGCAAAGTCACCCCAG +
Preference number: 5 (lower is better)
Translates to: GGIHPFPPEICLAAS*PFQAHSQTSAKSPQ
Trigger: CTGGGGTGACTTTGCAGAGGTTTGGCTATGAGCTTGGAAGGGGCAGCTGGCTGCAAGGCAGATTTCTGGGGGAAATGGGTGAATGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp GGACTTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCGCAGCCTCGACAGCCTaGAGTTTTCTGGCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: GLLGPPFSSMVLCHTPMVAASTA*SFLACL
Trigger: CAAACACGCCAGAAAACTCAAGGCTGTCGAGGCTGC...GACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGCAGCCTCGACAGCCTaGAGTTTTCTGGCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLAASTA*SFLACL
Trigger: CAAACACGCCAGAAAACTCAAGGCTGTCGAGGCTGC...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGGTGTGTGGCCTCTGCTaGCTCTTGGCAGCCTCGACA +
Preference number: 5 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWVCGLC*LLAAST
Trigger: TGTCGAGGCTGCCAAGAGCAAGCAGAGGCCACACAC...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGCGGGCTGCCAACGTCTaGGTGAGTTGCTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRRAANV*VSCFCK
Trigger: CTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCG...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GAGGGAGACCCACACCCGCCCTCCAAGAGTTGGGGTTCAGGAAGTCAGAGAAAGATCATCCACCGGTGCTaGGCTCCTTCAGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: EGDPHPPSKSWGSGSQRKIIHRC*APSVLA
Trigger: AGCAAGAACTGAAGGAGCCAAGCACCGGTGGATGAT...CTTTCTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGGTGTGGGTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461831.1
CDS-3UTR CAA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTCTTGTCCTGACAGCCTaGAGCCTGCTGCAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPLVLTA*SLLQLE
Trigger: CTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAG...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTACTGATCGAAGGACTTTaGGGTCCCCCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLLQLETPSLSPVKPQSLLIEGL*GPPFSS
Trigger: GGAGGAGAAAGGGGGACCCAAAAGTCCTTCGATCAG...TAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCATCAGCAAGTATCACTaGAACCAGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: HSHGHLVLTALSLLQLETISKYH*NQGGRG
Trigger: GCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGAT...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAATCAGCAAGTATCACTaGAACCAGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQISKYH*NQGGRG
Trigger: GCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGAT...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GGGTCTGTCAGGGTGGGAAATGCAGGCAAGCCTAGGATTAACCCTGGAAGGCCTAGTGCTAGGACCAGTTaGGAGTGGGAAGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: GSVRVGNAGKPRINPGRPSARTS*EWEAVG
Trigger: CCCTACAGCTTCCCACTCCAAACTGGTCCTAGCACT...AGGCCTTCCAGGGTTAATCCTAGGCTTGCCTGCATTTCCCACCCTGACAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp CTTTCCCTATGGCCCCTGTGCACCTGTCAGCTAGAATCACCCTCATaGAGGCATTCACCCATTTCCCCCAGAAATCTGCCTTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LSLWPLCTCQLESPS*RHSPISPRNLPCSQ
Trigger: CTGGCTGCAAGGCAGATTTCTGGGGGAAATGGGTGAATGCCTCCATGAGGGTGATTCTAGCTGACAGGTGCACAGGGGCCATAGGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 90 bp CTTGCTCAGAGTCATGCTTTTGGTGTCCAGCCTGAAATAATTGGGTaGGGAGGAGCTGGTCCCAGTCACCAGAGCACCCTGGCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LAQSHAFGVQPEIIG*GGAGPSHQSTLAFA
Trigger: AGCAAAGGCCAGGGTGCTCTGGTGACTGGGACCAGCTCCTCCCCACCCAATTATTTCAGGCTGGACACCAAAAGCATGACTCTGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATATCCATCGTGCTGAAGTaGGGGAAGAGACTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: LQLETPSLSPVKPQSLGISIVLK*GKRLSG
Trigger: CCCGCTCAGTCTCTTCCCCAACTTCAGCACGATGGA...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GAGGGGGCAGTGCTGCAGTGGAAAGGAGTTTGTGACATTGACATTGACAGCATGGTGACTCTCTTGGCTTaGTGTCCGGCACCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: EGAVLQWKGVCDIDIDSMVTLLA*CPAPPL
Trigger: CAGGGGAGGTGCCGGACACAAAGCCAAGAGAGTCAC...CATGCTGTCAATGTCAATGTCACAAACTCCTTTCCACTGCAGCACTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAACAACGTCTTGGTGAGTaGCTTCTGCAAGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQQRLGE*LLQGQF
Trigger: AAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTG...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CACTCCCATGGTCACCTTGTCCTGACAGCCTTGAGCCTGCTGCAGCTAGAGACCCAACGTCTTGGTGAGTaGCTTCTGCAAGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: HSHGHLVLTALSLLQLETQRLGE*LLQGQF
Trigger: AAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTG...GGTCTCTAGCTGCAGCAGGCTCAAGGCTGTCAGGACAAGGTGACCATGGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAAGGCCAGTTTAGACTaGAGGATACTCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQKASLD*RILTAS
Trigger: GCTGGCTGTGAGTATCCTCAAGTCTAAACTGGCCTT...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GCCTTGAGCCTGCTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAGCTGGGGCTGAGATTTaGCATAGATCTTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: ALSLLQLETPSLSPVKPQAGAEI*HRSLGS
Trigger: AGACCCCAAAGATCTATGCAAAATCTCAGCCCCAGC...TTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAGCAGGCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CAGTCCCTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGCTGATCGAAGGACTTTaGGGTCCCCCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QSLWHVGNQGVSGQEETRLIEGL*GPPFSS
Trigger: GGAGGAGAAAGGGGGACCCAAAAGTCCTTCGATCAG...CCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AGTCGTCCCCTGGCTAGGAGAGGATGGCTTGTAGAAGCTAAGATTCCTAGAGTCCCCGCCCTCCAAGAGTaGGGGTTCAGGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SRPLARRGWLVEAKIPRVPALQE*GFRKSE
Trigger: CTCTGACTTCCTGAACCCCAACTCTTGGAGGGCGGG...GACTCTAGGAATCTTAGCTTCTACAAGCCATCCTCTCCTAGCCAGGGGACGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp TGCCAACAGCAGCCTGGGTGGTTCTTACTTTCCCTATGGCCCCTGTaGACCTGTCAGCTAGAATCACCCTCATGGAGGCATTCACCCATT +
Preference number: 5 (lower is better)
Translates to: CQQQPGWFLLSLWPL*TCQLESPSWRHSPI
Trigger: AATGGGTGAATGCCTCCATGAGGGTGATTCTAGCTGACAGGTGCACAGGGGCCATAGGGAAAGTAAGAACCACCCAGGCTGCTGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 90 bp TGTTTGCTCTGCCAACAGCAGCCTGGGTGGTTCTTACTTTCCCTATaGCCCCTGTGCACCTGTCAGCTAGAATCACCCTCATGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: CLLCQQQPGWFLLSL*PLCTCQLESPSWRH
Trigger: ATGCCTCCATGAGGGTGATTCTAGCTGACAGGTGCACAGGGGCCATAGGGAAAGTAAGAACCACCCAGGCTGCTGTTGGCAGAGCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 90 bp GGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTaGGAAATCAGCTCTGGCCTCCCCATGAGGGCTAATAAGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GNQGVSGQEETRSGY*EISSGLPMRANKGQ
Trigger: TTGCCCCTTATTAGCCCTCATGGGGAGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAGTGTGTGGCCTCTGCTaGCTCTTGGCAGCCTCGACA +
Preference number: 5 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEVCGLC*LLAAST
Trigger: TGTCGAGGCTGCCAAGAGCAAGCAGAGGCCACACAC...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCCACTGGCCAGCGTaGGGATTGGGGACACTACAG +
Preference number: 5 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQLHWPA*GLGTLQ
Trigger: CTGTAGTGTCCCCAATCCCAACGCTGGCCAGTGGAG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTGTGGCATGTAGGAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCGACAAGGAGTGGCTATaGGGAAATCAGCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LWHVGNQGVSGQEETRSGDKEWL*GNQLWP
Trigger: AGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTC...GCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTCCTACATGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp CAGGGACTGCAGCTTTGCCTTTGTGCCCTGAGGGTATGTCCCATGTaGCAACCACAACCCTTATCCCTTTTCACATGTGTCTCCACCCAA +
Preference number: 5 (lower is better)
Translates to: QGLQLCLCALRVCPM*QPQPLSLFTCVSTQ
Trigger: TTGGGTGGAGACACATGTGAAAAGGGATAAGGGTTGTGGTTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAGCGGGGCAGCGCCATaGAAGTGGAAGGCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGSGAAP*KWKASK
Trigger: CTTGCTCGCCTTCCACTTCAATGGCGCTGCCCCGCT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCGGGCTGCCAACGTCTaGGTGAGTTGCTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQRAANV*VSCFCK
Trigger: CTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCG...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp TTTTGGGTCCCCCTTTCTCCTCCATGGTCCTCTGTCACACTCCCATGGTCACCTAAGGCCAGTTTAGACTaGAGGATACTCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FWVPLSPPWSSVTLPWSPKASLD*RILTAS
Trigger: GCTGGCTGTGAGTATCCTCAAGTCTAAACTGGCCTT...AGGTGACCATGGGAGTGTGACAGAGGACCATGGAGGAGAAAGGGGGACCCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS GCA 90 bp AAGGACCCACAGATTCCGAGAGGTCCTACAGAAGGGTTGTCCAGATaGAGAATAAAACTTGCTGGCATCGGGGAGGCTTCAGACCCTAAG +
Preference number: 5 (lower is better)
Translates to: KDPQIPRGPTEGLSR*RIKLAGIGEASDPK
Trigger: CTTAGGGTCTGAAGCCTCCCCGATGCCAGCAAGTTTTATTCTGCATCTGGACAACCCTTCTGTAGGACCTCTCGGAATCTGTGGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS-3UTR CAA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGAAGGCCAGTTTAGACTaGAGGATACTCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWKASLD*RILTAS
Trigger: GCTGGCTGTGAGTATCCTCAAGTCTAAACTGGCCTT...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTGCAGCTAGAGACCCCATCCCTATCTCCAGTGAAGCCCCAAAGCCTAGGAATAGCTGGGGCTGAGATTTaGCATAGATCTTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LQLETPSLSPVKPQSLGIAGAEI*HRSLGS
Trigger: AGACCCCAAAGATCTATGCAAAATCTCAGCCCCAGC...TATTCCTAGGCTTTGGGGCTTCACTGGAGATAGGGATGGGGTCTCTAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAAAGTGCTAGGACCAGTTaGGAGTGGGAAGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEESARTS*EWEAVG
Trigger: CCCTACAGCTTCCCACTCCAAACTGGTCCTAGCACT...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS CCA 90 bp TTTGTGCCTCCTGCTGCTCATGTGCTAATGGACAGACAGACAGACTaGGAACAAGATGACAAAGCCCAAGGACCCCAAGACCATCATCCT +
Preference number: 5 (lower is better)
Translates to: FVPPAAHVLMDRQTD*EQDDKAQGPQDHHP
Trigger: AGGATGATGGTCTTGGGGTCCTTGGGCTTTGTCATCTTGTTCCCAGTCTGTCTGTCTGTCCATTAGCACATGAGCAGCAGGAGGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS-3UTR CAA 90 bp AGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGCTCTGGATTTTGCATAGATCTTaGGGGTCTGTCAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RCLRTGGDKEWLLGNQLWILHRS*GSVRVG
Trigger: TCCCACCCTGACAGACCCCAAAGATCTATGCAAAAT...CCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp GAAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAATCAGCAAGTATCACTaGAACCAGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ETKVSQDRRRQGVAIGKSISKYH*NQGGRG
Trigger: GCCTCTGCCTCCCTGGTTCAAGTGATACTTGCTGAT...TGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAACAACGTCTTGGTGAGTaGCTTCTGCAAGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEQRLGE*LLQGQF
Trigger: AAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTG...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp CTTGTAGAAGCTAAGATTCCTAGAGTCTGGCCATGTGGGTCTTGGGTGGAGGAATGGCTCCTTCAGTTCTaGCTGCCTCAGACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LVEAKIPRVWPCGSWVEEWLLQF*LPQTSL
Trigger: AAGAGAAGTCTGAGGCAGCAAGAACTGAAGGAGCCA...TTCCTCCACCCAAGACCCACATGGCCAGACTCTAGGAATCTTAGCTTCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461831.1
CDS-3UTR CAA 90 bp AAACCAAGGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTGGGAAATCAGGCTGGGGCTGAGATTTaGCATAGATCTTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: KPRCLRTGGDKEWLLGNQAGAEI*HRSLGS
Trigger: AGACCCCAAAGATCTATGCAAAATCTCAGCCCCAGC...CTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACCTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCAGTGCTAGGACCAGTTaGGAGTGGGAAGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGSARTS*EWEAVG
Trigger: CCCTACAGCTTCCCACTCCAAACTGGTCCTAGCACT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS-3UTR CAA 90 bp TCCCTCAATATTAAGACTGGGCTTATCAGCAAGTATCACTTGAACCAGGGAGGCATTTTGCATAGATCTTaGGGGTCTGTCAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SLNIKTGLISKYHLNQGGILHRS*GSVRVG
Trigger: TCCCACCCTGACAGACCCCAAAGATCTATGCAAAAT...GCCTCCCTGGTTCAAGTGATACTTGCTGATAAGCCCAGTCTTAATATTGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS CAA 90 bp GCCAGCGCTGCGTGCTTCTGCAGCTTGCTGTGCTGGCTGGAGGGCTaGGGGGTCTTCCCGGCCAGGCGGTCTTTGTGCCTCCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ASAACFCSLLCWLEG*GVFPARRSLCLLLL
Trigger: GAGCAGCAGGAGGCACAAAGACCGCCTGGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CAA 72 bp GGGGCAGCGCCATTGAAGTGGAAGGCGAGCAAGTGCTaGAAGTCCAGCGGGGGCTGCAGAGGCCGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GAAPLKWKASKC*KSSGGCRGRVG
Trigger: GCCCACCCGGCCTCTGCAGCCCCCGCTGGACTTCAAGCACTTGCTCGCCTTCCACTTCAATGGCGCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436535.4
ENST00000618554.4
CDS CCA 72 bp GACGATAGGTCCTGTGGCAGGGCGGACAGCTCCTGCTaGGGTGCGAAACAGAGCTGGGCCCAGGATGGGAGC +
Preference number: 6 (lower is better)
Translates to: DDRSCGRADSSC*GAKQSWAQDGS
Trigger: GCTCCCATCCTGGGCCCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCTGCCACAGGACCTATCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp GGGGGTCTCCTTCTCAGCCGGTGGGGGTGGGCTCAGTaGCCGCTTCATATCTCAGCCTCCCAAAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGLLLSRWGWAQ*PLHISASQSAG
Trigger: CCCAGCGCTTTGGGAGGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 72 bp GCGTGCTTCTGCAGCTTGCTGTGCTGGCTGGAGGGCTaGGGGGTCTTCCCGGCCAGGCGGTCTTTGTGCCTC +
Preference number: 6 (lower is better)
Translates to: ACFCSLLCWLEG*GVFPARRSLCL
Trigger: GAGGCACAAAGACCGCCTGGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CAA 72 bp CTGGAGCCTGGGACCCCCACCCCGCAGATGAGGCCCTaGTCTGAAAGCCTGTGGCTACCAGGAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LEPGTPTPQMRP*SESLWLPGGSR
Trigger: CCTGGAGCCTCCTGGTAGCCACAGGCTTTCAGACAAGGGCCTCATCTGCGGGGTGGGGGTCCCAGGCTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 72 bp AAGGACGATAGGTCCTGTGGCAGGGCGGACAGCTCCTaGTGGGGTGCGAAACAGAGCTGGGCCCAGGATGGG +
Preference number: 6 (lower is better)
Translates to: KDDRSCGRADSS*WGAKQSWAQDG
Trigger: CCCATCCTGGGCCCAGCTCTGTTTCGCACCCCAGCAGGAGCTGTCCGCCCTGCCACAGGACCTATCGTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp AGCAGCTCCAGATATGGGGGTCTCCTTCTCAGCCGGTaGGGGTGGGCTCAGTGGCCGCTTCATATCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SSSRYGGLLLSR*GWAQWPLHICG
Trigger: CCCGCAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS GCA 72 bp TGCAAGGCCAGTTTAGAAGCCAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTGGAGGGCTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: CKASLEASAACF*SLLCWLEGLGV
Trigger: GACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTTCTAAACTGGCCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS GCA 72 bp GACTTGAGGATACTCACAGCCAGCGCTGCGTGCTTCTaGAGCTTGCTGTGCTGGCTGGAGGGCTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: DLRILTASAACF*SLLCWLEGLGV
Trigger: GACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCTGTGAGTATCCTCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS GCA 72 bp GAGTCTTGGCCTTTGCCCTTAATTGGCCCACTGGCCTaGTGGCCTCGCTTCTCCAGCCTGCTCTGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: ESWPLPLIGPLA*WPRFSSLLCCA
Trigger: GGCACAGCAGAGCAGGCTGGAGAAGCGAGGCCAGCAGGCCAGTGGGCCAATTAAGGGCAAAGGCCAAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS CCA 72 bp CCACAGTGCACCTGGGCCTGGGCCGCCGAGTTCAGCTaGATGTTGCAGACATCACAGAGCGTGTACGATGGC +
Preference number: 6 (lower is better)
Translates to: PQCTWAWAAEFS*MLQTSQSVYDG
Trigger: GCCATCGTACACGCTCTGTGATGTCTGCAACATCCAGCTGAACTCGGCGGCCCAGGCCCAGGTGCACTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436535.4
ENST00000453355.2
CDS CCA 72 bp AGCAGCTCCAGATATGGGGGTCTCCTTCTCAGCCGGTaGGGGTGGGCTCAGTGGCCGCTTCATATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSSRYGGLLLSR*GWAQWPLHISA
Trigger: GGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 72 bp TCTTGGCCTTTGCCCTTAATTGGCCCACTGGCCTGCTaGCCTCGCTTCTCCAGCCTGCTCTGCTGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: SWPLPLIGPLAC*PRFSSLLCCAL
Trigger: CAGGGCACAGCAGAGCAGGCTGGAGAAGCGAGGCCAGCAGGCCAGTGGGCCAATTAAGGGCAAAGGCCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS CAA 72 bp CCTGGCCAGGAGTCCAAAGGAAGAGGGGCCTCCCCCTaGTCCCTGGGTTGGAGTGCTGTGTACCTTGCTGAC +
Preference number: 6 (lower is better)
Translates to: PGQESKGRGASP*SLGWSAVYLAD
Trigger: GTCAGCAAGGTACACAGCACTCCAACCCAGGGACAAGGGGGAGGCCCCTCTTCCTTTGGACTCCTGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 72 bp CTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTAGAAGCCAGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: LGRKRAANVLVS*FCKASLEASAA
Trigger: CGCAGCGCTGGCTTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS CCA 72 bp TCCAGATATGGGGGTCTCCTTCTCAGCCGGTGGGGGTaGGCTCAGTGGCCGCTTCATATCTCAGCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SRYGGLLLSRWG*AQWPLHISASQ
Trigger: TTGGGAGGCTGAGATATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 72 bp TCACAGAGCGTGTACGATGGCCGCTTTCTTTCTCGCTaGGGCTTAGGTGGTTCTGGGGGCCGAGGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: SQSVYDGRFLSR*GLGGSGGRGRH
Trigger: GTGCCTCCCTCGGCCCCCAGAACCACCTAAGCCCAAGCGAGAAAGAAAGCGGCCATCGTACACGCTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436535.4
ENST00000453355.2
CDS CAA 72 bp GCTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTaGCTTCTGCAAGGCCAGTTTAGAAGCCAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AGQEAGCQRLGE*LLQGQFRSQRC
Trigger: GCAGCGCTGGCTTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS GCA 72 bp GGGTGTCTGAGGTCAGAGTGTAGCCTCCGGCAAAACTaGCAGCCTGGGCTGCAAGGTAGGTTTCTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: GCLRSECSLRQN*QPGLQGRFLLA
Trigger: GGCCAACAGAAACCTACCTTGCAGCCCAGGCTGGCAGTTTTGCCGGAGGCTACACTCTGACCTCAGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 72 bp TTCCTGCTGCCCCCAGGGACTGCAGCTTTGCCTTTGTaGCCTGAGGGTATGTCCCATGTGGCAACCACAACC +
Preference number: 6 (lower is better)
Translates to: FLLPPGTAALPL*PEGMSHVATTT
Trigger: GGTTGTGGTTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 72 bp GAAGCTGGGAGGCCGAGTTCACTGTCACCTTACACGTaGGGCAGTAGAGGTGCCCCTTCTCACTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: EAGRPSSLSPYT*GSRGAPSHSCL
Trigger: AAGGCAGGAGTGAGAAGGGGCACCTCTACTGCCCCACGTGTAAGGTGACAGTGAACTCGGCCTCCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436535.4
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp TCATACATCCAAAGCACACAGACTGGGTCCTCACCCTaGGGTAGGCCCTGGGAAGGGGAGGTGAGTCTTGGC +
Preference number: 6 (lower is better)
Translates to: SYIQSTQTGSSP*GRPWEGEVSLG
Trigger: GCCAAGACTCACCTCCCCTTCCCAGGGCCTACCCCAGGGTGAGGACCCAGTCTGTGTGCTTTGGATGTATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS CAA 72 bp CAGGAGACTTTCCTGCTGCCCCCAGGGACTGCAGCTTaGCCTTTGTGCCCTGAGGGTATGTCCCATGTGGCA +
Preference number: 6 (lower is better)
Translates to: QETFLLPPGTAA*PLCPEGMSHVA
Trigger: TGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 90 bp TTGCAGACATCACAGAGCGTGTACGATGGCCGCTTTCTTTCTCGCTaGGGCTTAGGTGGTTCTGGGGGCCGAGGGAGGCACTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LQTSQSVYDGRFLSR*GLGGSGGRGRHSAA
Trigger: AGCTGCTGAGTGCCTCCCTCGGCCCCCAGAACCACCTAAGCCCAAGCGAGAAAGAAAGCGGCCATCGTACACGCTCTGTGATGTCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436535.4
ENST00000453355.2
CDS CAA 90 bp CTCTTCCTTCAGGAGACTTTCCTGCTGCCCCCAGGGACTGCAGCTTaGCCTTTGTGCCCTGAGGGTATGTCCCATGTGGCAACCACAACC +
Preference number: 6 (lower is better)
Translates to: LFLQETFLLPPGTAA*PLCPEGMSHVATTT
Trigger: GGTTGTGGTTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGTCTCCTGAAGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 72 bp AGGAAGCGGGCTGCCAACGTCTTGGTGAGTTGCTTCTaGAAGGCCAGTTTAGAAGCCAGCGCTGCGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RKRAANVLVSCF*KASLEASAACF
Trigger: GAAGCACGCAGCGCTGGCTTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436535.4
CDS GCA 72 bp AGGAGACTTTCCTGCTGCCCCCAGGGACTGCAGCTTTaGCTTTGTGCCCTGAGGGTATGTCCCATGTGGCAA +
Preference number: 6 (lower is better)
Translates to: RRLSCCPQGLQL*LCALRVCPMWQ
Trigger: TTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 72 bp CTGAAGTTGGGGAAGAGACTGAGCGGGGCAGCGCCATaGAAGTGGAAGGCGAGCAAGTGCTTGAAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LKLGKRLSGAAP*KWKASKCLKSS
Trigger: GCTGGACTTCAAGCACTTGCTCGCCTTCCACTTCAATGGCGCTGCCCCGCTCAGTCTCTTCCCCAACTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436535.4
ENST00000618554.4
ENST00000649819.1
CDS CAA 72 bp ACTTTCCTGCTGCCCCCAGGGACTGCAGCTTTGCCTTaGTGCCCTGAGGGTATGTCCCATGTGGCAACCACA +
Preference number: 6 (lower is better)
Translates to: TFLLPPGTAALP*CPEGMSHVATT
Trigger: TGTGGTTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 90 bp CTTCAGGAGACTTTCCTGCTGCCCCCAGGGACTGCAGCTTTGCCTTaGTGCCCTGAGGGTATGTCCCATGTGGCAACCACAACCCTTATC +
Preference number: 6 (lower is better)
Translates to: LQETFLLPPGTAALP*CPEGMSHVATTTLI
Trigger: GATAAGGGTTGTGGTTGCCACATGGGACATACCCTCAGGGCACAAAGGCAAAGCTGCAGTCCCTGGGGGCAGCAGGAAAGTCTCCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 72 bp GAGGGGACACCAAACGTGTGGCTGATGACAGCTTTCTaGACCGGGTCCATCGTGCTGAAGTTGGGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: EGTPNVWLMTAF*TGSIVLKLGKR
Trigger: TCTCTTCCCCAACTTCAGCACGATGGACCCGGTCCAGAAAGCTGTCATCAGCCACACGTTTGGTGTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436535.4
ENST00000618554.4
ENST00000649819.1
CDS CAA 72 bp GAGAGATTGGATCTTACTTGTCTCTGGCCTACAGGATaGTGTGTGTGGAGCGGGGGACACAGTGGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: ERLDLTCLWPTG*CVWSGGHSGCP
Trigger: GGGGCACCCACTGTGTCCCCCGCTCCACACACACAATCCTGTAGGCCAGAGACAAGTAAGATCCAATCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS GCA 72 bp CTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTTaGTTCTGCAAGGCCAGTTTAGACTTGAGGATACTC +
Preference number: 6 (lower is better)
Translates to: LGRKRAANVLVS*FCKASLDLRIL
Trigger: GAGTATCCTCAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp TGGCCCCTGTGCACCTGTCAGCTAGAATCACCCTCATaGAGGCATTCACCCATTTCCCCCAGAAATCTGCCT +
Preference number: 6 (lower is better)
Translates to: WPLCTCQLESPS*RHSPISPRNLP
Trigger: AGGCAGATTTCTGGGGGAAATGGGTGAATGCCTCCATGAGGGTGATTCTAGCTGACAGGTGCACAGGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 72 bp TGCCAACAGCAGCCTGGGTGGTTCTTACTTTCCCTATaGCCCCTGTGCACCTGTCAGCTAGAATCACCCTCA +
Preference number: 6 (lower is better)
Translates to: CQQQPGWFLLSL*PLCTCQLESPS
Trigger: TGAGGGTGATTCTAGCTGACAGGTGCACAGGGGCCATAGGGAAAGTAAGAACCACCCAGGCTGCTGTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CCA 72 bp GGTGTCTCAGGACAGGAGGAGACAAGGAGTGGCTATTaGGAAATCAGCTCTGGCCTCCCCATGAGGGCTAAT +
Preference number: 6 (lower is better)
Translates to: GVSGQEETRSGY*EISSGLPMRAN
Trigger: ATTAGCCCTCATGGGGAGGCCAGAGCTGATTTCCCAATAGCCACTCCTTGTCTCCTCCTGTCCTGAGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CAA 72 bp GCTGGGCAGGAAGCGGGCTGCCAACGTCTTGGTGAGTaGCTTCTGCAAGGCCAGTTTAGACTTGAGGATACT +
Preference number: 6 (lower is better)
Translates to: AGQEAGCQRLGE*LLQGQFRLEDT
Trigger: AGTATCCTCAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CAA 90 bp AGGCGGCCTAAGGACCCACAGATTCCGAGAGGTCCTACAGAAGGGTaGTCCAGATGCAGAATAAAACTTGCTGGCATCGGGGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RRPKDPQIPRGPTEG*SRCRIKLAGIGEAS
Trigger: TGAAGCCTCCCCGATGCCAGCAAGTTTTATTCTGCATCTGGACAACCCTTCTGTAGGACCTCTCGGAATCTGTGGGTCCTTAGGCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 90 bp ATCACCCTCATGGAGGCATTCACCCATTTCCCCCAGAAATCTGCCTaGCAGCCAGCTGCCCCTTCCAAGCTCATAGCCAAACCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: ITLMEAFTHFPQKSA*QPAAPSKLIAKPLQ
Trigger: TTGCAGAGGTTTGGCTATGAGCTTGGAAGGGGCAGCTGGCTGCAAGGCAGATTTCTGGGGGAAATGGGTGAATGCCTCCATGAGGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS TCA 72 bp TGCTGCTCATGTGCTGCTTCAGTTGGGTCTCTGAATTaGCCTGGAGCTGACAGAGAGCACAGTGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: CCSCAASVGSLN*PGADREHSGRQ
Trigger: CTGCCTTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAGCAGCACATGAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436535.4
ENST00000461831.1
ENST00000618554.4
ENST00000649819.1
CDS TCA 72 bp TCACTTCTCCCACCTGCTTCAGTTGGGTCTCTGAATTaGCCTGGAGCTGACAGAGAGCACAGTGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLLPPASVGSLN*PGADREHSGRQ
Trigger: CTGCCTTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAGCAGGTGGGAGAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS TCA 72 bp CAGCCTCACTTCTCCCACCTGCTTCAGTTGGGTCTCTaGATTGACCTGGAGCTGACAGAGAGCACAGTGGAA +
Preference number: 6 (lower is better)
Translates to: QPHFSHLLQLGL*IDLELTESTVE
Trigger: TTCCACTGTGCTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAGCAGGTGGGAGAAGTGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496039.5
CDS GCA 72 bp AGGAAGCGGGCTGCCAACGTCTTGGTGAGTTGCTTCTaGAAGGCCAGTTTAGACTTGAGGATACTCACAGCC +
Preference number: 6 (lower is better)
Translates to: RKRAANVLVSCF*KASLDLRILTA
Trigger: GGCTGTGAGTATCCTCAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461831.1
ENST00000496039.5
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp CAGCTGGATGTTGCAGACATCACAGAGCGTGTACGATaGCCGCTTTCTTTCTCGCTTGGGCTTAGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: QLDVADITERVR*PLSFSLGLRWF
Trigger: GAACCACCTAAGCCCAAGCGAGAAAGAAAGCGGCCATCGTACACGCTCTGTGATGTCTGCAACATCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436535.4
ENST00000453355.2
CDS GCA 72 bp CCACCTCCCCACACTGAGCCTGAATGTGAATCTGTTTaGTCTGCCAACAGCAGCCTGGGTGGTTCTTACTTT +
Preference number: 6 (lower is better)
Translates to: PPPHTEPECESV*SANSSLGGSYF
Trigger: AAAGTAAGAACCACCCAGGCTGCTGTTGGCAGAGCAAACAGATTCACATTCAGGCTCAGTGTGGGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS CAA 72 bp AAGGACCCACAGATTCCGAGAGGTCCTACAGAAGGGTaGTCCAGATGCAGAATAAAACTTGCTGGCATCGGG +
Preference number: 6 (lower is better)
Translates to: KDPQIPRGPTEG*SRCRIKLAGIG
Trigger: CCCGATGCCAGCAAGTTTTATTCTGCATCTGGACAACCCTTCTGTAGGACCTCTCGGAATCTGTGGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2
CDS TCA 72 bp TGTGCCTCGGCCTGGTTCGCTGAGTTGAACCTCAGGTaGCAGATGTTACAGGAAATGAACAGCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: CASAWFAELNLR*QMLQEMNSFFF
Trigger: GAAGAAGAAGCTGTTCATTTCCTGTAACATCTGTCACCTGAGGTTCAACTCAGCGAACCAGGCCGAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436535.4
ENST00000618554.4
ENST00000649819.1
CDS CCA 72 bp CCACTCAATCTTGGGGAGGGTGGTAAGCAGAGAGATTaGATCTTACTTGTCTCTGGCCTACAGGATTGTGTG +
Preference number: 6 (lower is better)
Translates to: PLNLGEGGKQRD*ILLVSGLQDCV
Trigger: CACACAATCCTGTAGGCCAGAGACAAGTAAGATCCAATCTCTCTGCTTACCACCCTCCCCAAGATTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453355.2