RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF385B (Homo sapiens)

Ensembl gene IDs: ENSG00000144331

Ensembl transcript IDs: ENST00000336917.9, ENST00000409343.5, ENST00000409692.5, ENST00000410066.7, ENST00000438871.2, ENST00000439340.1, ENST00000451732.6, ENST00000457304.5, ENST00000463918.1, ENST00000466398.5, ENST00000469551.5, ENST00000475539.5, ENST00000495289.1

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGTTCTCAACTTCCTACTaGCCTCAAACGTCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: KALVNLVMCFSLELGDWVFSTSY*PQTSWG
Trigger: ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAA...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGCATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 2 (lower is better)
Translates to: QSLKALVNLVMCFSLELGHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTTCTCAACTTCCTACTaGCCTCAAACGTCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGFSTSY*PQTSWG
Trigger: ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAATTGGGGGACTGGGTaGTGGGCTGCATTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: LQVADIDALKESTLFCCSNWGTG*WAAFCG
Trigger: CCCACAAAATGCAGCCCACCACCCAGTCCCCCAATT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAAATTGGGGGACTGGGTaGTGGGCTGCATTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMENWGTG*WAAFCG
Trigger: CCCACAAAATGCAGCCCACCACCCAGTCCCCCAATT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 2 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATACATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 2 (lower is better)
Translates to: CSMITLAPDITNIPVLLIHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGGATACAGCAGTACTTaGGTCGAAACAGTACACAAT +
Preference number: 2 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKGYSST*VETVHN
Trigger: ATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCGGATACAGCAGTACTTaGGTCGAAACAGTACACAAT +
Preference number: 2 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCGYSST*VETVHN
Trigger: ATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCC...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCATGGGAGCATGACCTaGAATATATTCAGCGAACAG +
Preference number: 2 (lower is better)
Translates to: LQVADIDALKESTLFCCSHGSMT*NIFSEQ
Trigger: CTGTTCGCTGAATATATTGCAGGTCATGCTCCCATG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR TCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGATAACTCTTGCCCCTaGTATCACAAACATTCCAGT +
Preference number: 2 (lower is better)
Translates to: LQVADIDALKESTLFCCSDNSCP*YHKHSS
Trigger: ACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTGTTTGTATACGTTTaGTTAGCAACACAAACCAGT +
Preference number: 2 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKLFVYV*LATQTS
Trigger: ACTGGTTTGTGTTGCTAAGCAAACGTATACAAACAG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATGTCTTCTTGCAGAATaGACAAGAGGTGCAAAAATG +
Preference number: 2 (lower is better)
Translates to: CSMITLAPDITNIPVLLICLLAE*TRGAKM
Trigger: CATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAAGAATGCACAAGAGGTaGAAAAATGTGCAATTTAGG +
Preference number: 2 (lower is better)
Translates to: CSMITLAPDITNIPVLLIRMHKR*KNVQFR
Trigger: CCTAAATTGCACATTTTTGCACCTCTTGTGCATTCT...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGAATGCACAAGAGGTaGAAAAATGTGCAATTTAGG +
Preference number: 2 (lower is better)
Translates to: LQVADIDALKESTLFCCSRMHKR*KNVQFR
Trigger: CCTAAATTGCACATTTTTGCACCTCTTGTGCATTCT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATCTTCTGTACATTATTaGATTAGGGAGCCACAAAAT +
Preference number: 2 (lower is better)
Translates to: CSMITLAPDITNIPVLLISSVHY*IREPQN
Trigger: ATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGAGGTGCAAAAATGTaGAATTTAGGAAGCTCTTTT +
Preference number: 2 (lower is better)
Translates to: LQVADIDALKESTLFCCSRGAKM*NLGSSF
Trigger: AAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATGTTTCTCTCTGGAATaGGGGGACTGGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: CSMITLAPDITNIPVLLICFSLE*GDWVVG
Trigger: GCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSSEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMESEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTTCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LQVADIDALKESTLFCCSSEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR TCA 72 bp CCCTGTCAACAACAGTACACCAAAAAGAGAACTTTGTaGTCCGTTGGTAAGATAGTATCCACAAGTAAGCAC +
Preference number: 3 (lower is better)
Translates to: PCQQQYTKKRTL*SVGKIVSTSKH
Trigger: GTGCTTACTTGTGGATACTATCTTACCAACGGATCACAAAGTTCTCTTTTTGGTGTACTGTTGTTGACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCTAGAATACACCCAGTaGGATACCAGAGTTATTTAC +
Preference number: 3 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNLEYTQ*DTRVIY
Trigger: GTAAATAACTCTGGTATCCAACTGGGTGTATTCTAG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGGATACAGCAGTACTaGGGTCGAAACAGTACACAA +
Preference number: 3 (lower is better)
Translates to: LQVADIDALKESTLFCCSRIQQY*GRNSTQ
Trigger: TTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCTCTGTTTGTATACGTTaGCTTAGCAACACAAACCAG +
Preference number: 3 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCSVCIR*LSNTNQ
Trigger: CTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGA...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR TCA 72 bp CACTCTATTTTGTTGTTCTATGATAACTCTTGCCCCTaGTATCACAAACATTCCAGTCTTGTTGATATCGGC +
Preference number: 3 (lower is better)
Translates to: HSILLFYDNSCP*YHKHSSLVDIG
Trigger: GCCGATATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACAACAAAATAGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATACACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: CSMITLAPDITNIPVLLIHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTTCTGTTTGTATACGTTaGCTTAGCAACACAAACCAG +
Preference number: 3 (lower is better)
Translates to: LQVADIDALKESTLFCCSSVCIR*LSNTNQ
Trigger: CTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGA...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
3UTR-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAAAATACATGGATTCATaGTCTTCTTGCAGAATGCAC +
Preference number: 3 (lower is better)
Translates to: CSMITLAPDITNIPVLLIKYMDS*SSCRMH
Trigger: GTGCATTCTGCAAGAAGACAATGAATCCATGTATTT...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGGGCGCGTGGGGCAGTaGCTCCTCCAGCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVGRVGQ*LLQPGS
Trigger: GCTTCCCGGCTGGAGGAGCCACTGCCCCACGCGCCC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGTCACGCTCCGGTGGTTaGTGCGGTCCCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILSRSGG*CGPARA
Trigger: AGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGA...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCCCGGGGTTTGGACGTaGCAACGCCACTCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADPGVWT*QRHSRA
Trigger: CGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCAGGAGTGGCGCGGATaGGCCCATGCCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVQEWRG*AHAQAS
Trigger: TGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGCGCGGATGGGCCCATaGCCAGGCCTCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVARMGP*PGLRRA
Trigger: AGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCACACAGAGAGGGAATaGGGCGGAACCGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADHTERE*GGTVRG
Trigger: CCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGGAGGGAGAAGTGGCTaGTCCAGGTGGCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADGGRSG*SRWQGC
Trigger: ACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGATCTCCCGCGATCTGCTaGAGCCCAGGCGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSPAIC*SPGGGG
Trigger: ACCGCCACCGCCTGGGCTGCAGCAGATCGCGGGAGA...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGAGTGGCTGCTCCAGGTaGCAGGGGTGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILSGCSR*QGCCAR
Trigger: TCTGGCACAACACCCCTGCCACCTGGAGCAGCCACT...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGGAATGGCTGGAGCCTaGAAGAGCGAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVGMAGA*KSEAEG
Trigger: GCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGGATGGAGGCAGGAGTaGCGCGGATGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGGWRQE*RGWAHA
Trigger: GGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGCGCGGATGGGCCCATaGCCAGGCCTCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGARMGP*PGLRRA
Trigger: AGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGCGGGTGGTGGGGGCTaGCCATCACTCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGAGGGG*PSLSCF
Trigger: GAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGTGGCTGCTCCAGGTaGCAGGGGTGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSGCSR*QGCCAR
Trigger: TCTGGCACAACACCCCTGCCACCTGGAGCAGCCACT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACACGGAGCAAAGAGGATaGAGGCAGGAGTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADTEQRG*RQEWRG
Trigger: TCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGGGGGCATGGGAGCATaGCCTGCAATATATTCAGCG +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILGGMGA*PAIYSA
Trigger: CGCTGAATATATTGCAGGTCATGCTCCCATGCCCCC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGCCCGGCGCGGCCCCTaGACTGTCCAACTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGARRGP*TVQLLP
Trigger: GGGCAAGAGTTGGACAGTTCAGGGGCCGCGCCGGGC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGGAGGGAGAAGTGGCTaGTCCAGGTGGCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGGGRSG*SRWQGC
Trigger: ACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCGTTCTCCCGCGATCTaGTGCAGCCCAGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNRSPAI*CSPGGG
Trigger: GCCACCGCCTGGGCTGCAGCAGATCGCGGGAGAACG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCGGTCCCGCCAGGGCTaGACCGGGGCTTCGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKRSRQG*TGASRR
Trigger: TCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGCTGCTTCACTCGTTTaGGGTGGGATTTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILAASLV*GGICRW
Trigger: CCAACGGCAAATCCCACCGCAAACGAGTGAAGCAGC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGGAATGGCTGGAGCCTaGAAGAGCGAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGGMAGA*KSEAEG
Trigger: GCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGCCACTTTCAGAGCTTaGTGGCTGACTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILATFRA*WLTGTA
Trigger: AGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGGGGGCATGGGAGCATaGCCTGCAATATATTCAGCG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADGGMGA*PAIYSA
Trigger: CGCTGAATATATTGCAGGTCATGCTCCCATGCCCCC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCGGGAGCTCCATTTGTaGTCTTGGAGGGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVRELHL*SWREKW
Trigger: CCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAGTGGCTGCTCCAGGTaGCAGGGGTGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGSGCSR*QGCCAR
Trigger: TCTGGCACAACACCCCTGCCACCTGGAGCAGCCACT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCAGGAGTGGCGCGGATaGGCCCATGCCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSQEWRG*AHAQAS
Trigger: TGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGGATGGAGGCAGGAGTaGCGCGGATGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGGWRQE*RGWAHA
Trigger: GGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCTGGAATTGGGGGACTaGGTGGTGGGCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVLELGD*VVGCIL
Trigger: CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTTGCTCACGCTCCGGTaGTTGCTGCGGTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNLLTLR*LLRSRQ
Trigger: CTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGCTGCAGAGTTCAGCTaGATGTTGCACACCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILAAEFS*MLHTSQ
Trigger: CTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR TCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCTCGGCCTGGCTATCTaGGTTAAAGCGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVLGLAI*VKAKLT
Trigger: TGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGATCATCTCAACCTGGTaGTCCCGTGAAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILIISTW*SREMWC
Trigger: GCACCACATTTCACGGGAGCACCAGGTTGAGATGAT...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGCGCGGATGGGCCCATaGCCAGGCCTCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGARMGP*PGLRRA
Trigger: AGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGTTGTTGCCTGTGATTaGAGTGATGGAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADVVACD*SDGAAG
Trigger: CCCAGCTGCTCCATCACTCCAATCACAGGCAACAAC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCTCCATTTGTGCTCTTaGAGGGAGAAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADLHLCS*REKWLL
Trigger: GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCAGGAGTGGCGCGGATaGGCCCATGCCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKQEWRG*AHAQAS
Trigger: TGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGTCCACTCCACATCCTaGCAGGGCTCTCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGVHSTS*QGSHQL
Trigger: AAGCTGGTGAGAGCCCTGCCAGGATGTGGAGTGGAC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR TCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGTGGTTTGATATCCAGTaGAGGCTGCATCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILWFDIQ*RLHHQG
Trigger: ACCCTGATGATGCAGCCTTCACTGGATATCAAACCA...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTCAGAGCTTGATGGCTaGCTGGAACTGCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSELDG*LELLAF
Trigger: AAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGGGGGCATGGGAGCATaGCCTGCAATATATTCAGCG +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGGGMGA*PAIYSA
Trigger: CGCTGAATATATTGCAGGTCATGCTCCCATGCCCCC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTGGAGGGAGAAGTGGCTaGTCCAGGTGGCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSGGRSG*SRWQGC
Trigger: ACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCC...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGCGCGGATGGGCCCATaGCCAGGCCTCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKARMGP*PGLRRA
Trigger: AGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGGCATGTACTGCCTGTaGTGCTGTTGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNGMYCL*CCCCWG
Trigger: GCCCCAGCAGCAACAGCAGCACAGGCAGTACATGCC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGGAATGGCTGGAGCCTaGAAGAGCGAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGGMAGA*KSEAEG
Trigger: GCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAATTGGGGGACTGGGTaGTGGGCTGCATTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGNWGTG*WAAFCG
Trigger: CCCACAAAATGCAGCCCACCACCCAGTCCCCCAATT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAACCTGGTGCTCCCGTaGAATGTGGTGCTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGNLVLP*NVVLGN
Trigger: GTTTCCTAGCACCACATTTCACGGGAGCACCAGGTT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTGGTTTGATATCCAGTaGAGGCTGCATCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADWFDIQ*RLHHQG
Trigger: ACCCTGATGATGCAGCCTTCACTGGATATCAAACCA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGCTCGGCCTGGCTATCTaGGTTAAAGCGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGLGLAI*VKAKLT
Trigger: TGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAG...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGGCTTTTTCTTCTTCTaGTTCAACAACAGTACCGGG +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILGFFFF*FNNSTG
Trigger: CCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCCGTTGGAATGCACCTaGGCCTGGGCTGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSPLECT*AWAAEF
Trigger: GAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGAGISL*AVLGRN
Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGATGGCTGACTGGAACTaGTGGCTTTTAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILMADWN*WLLTSL
Trigger: AAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCAT...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCAGCCGGGAAGCTGTTaGTCACGCTCCGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKQPGSC*SRSGGC
Trigger: GCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVPLRCP*KEPFWV
Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGTTGTTGCCTGTGATTaGAGTGATGGAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGVVACD*SDGAAG
Trigger: CCCAGCTGCTCCATCACTCCAATCACAGGCAACAAC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTAGTGGCTGCTCCAGGTaGCAGGGGTGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSSGCSR*QGCCAR
Trigger: TCTGGCACAACACCCCTGCCACCTGGAGCAGCCACT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTCCATTTGTGCTCTTaGAGGGAGAAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGLHLCS*REKWLL
Trigger: GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAG...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGTATTTTGGCTTCAGTaGTTTCCCTGCAACTCGATC +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILVFWLQ*FPCNSI
Trigger: GATCGAGTTGCAGGGAAACCACTGAAGCCAAAATAC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTAAGGGCTGTATTTTaGCTTCAGTGGTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVVRAVF*LQWFPC
Trigger: GCAGGGAAACCACTGAAGCCAAAATACAGCCCTTAC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGGATGGAGGCAGGAGTaGCGCGGATGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSGWRQE*RGWAHA
Trigger: GGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTACGGAGCAAAGAGGATaGAGGCAGGAGTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSTEQRG*RQEWRG
Trigger: TCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTGGCCTCAAACGTCTTaGGGTTTGCAGACGTTAGTA +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADWPQTS*GLQTLV
Trigger: TACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTTCTCAACTTCCTACTaGCCTCAAACGTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADFSTSY*PQTSWG
Trigger: ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGCATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCGAGGACCCCGGGGTTTaGACGTGCCAACGCCACTCT +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCEDPGV*TCQRHS
Trigger: AGAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTC...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGGAAGGGTAGTAGTGTaGCATGTACTGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGGRVVV*HVLPVL
Trigger: CAGCACAGGCAGTACATGCCACACTACTACCCTTCC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR TCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGGCAGGCAGTGCTTCTaGACAAATCATACGTCCTGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGGRQCF*TNHTSC
Trigger: ACAGGACGTATGATTTGTTCAGAAGCACTGCCTGCC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR TCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGGCTTTTTCTTCTTCTaGTTCAACAACAGTACCGGG +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVGFFFF*FNNSTG
Trigger: CCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCGCGCGCCGAAGCTGTaGCGGTTTACTAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSRAPKL*RFTKQR
Trigger: TCTCTGCTTAGTAAACCGTCACAGCTTCGGCGCGCG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGCAACTCGATCTTTATaGCTTCGGCTAGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADATRSL*LRLEMC
Trigger: GCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGCTTCAGTGGTTTCCCTaGAACTCGATCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVLQWFP*NSIFMP
Trigger: AGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAG...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCTTCAGTGGTTTCCCTaGAACTCGATCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADLQWFP*NSIFMP
Trigger: AGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCATGGGAGCATGACCTaGAATATATTCAGCGAACAG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADHGSMT*NIFSEQ
Trigger: CTGTTCGCTGAATATATTGCAGGTCATGCTCCCATG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGAGGATAGGATTTAATTaGACCAGCCCCATTACGAGC +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVRIGFN*TSPITS
Trigger: GCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCT...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGGATAGGATTTAATTaGACCAGCCCCATTACGAGC +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADRIGFN*TSPITS
Trigger: GCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCTGGAATTGGGGGACTaGGTGGTGGGCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNLELGD*VVGCIL
Trigger: CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGGATACAGCAGTACTTaGGTCGAAACAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILGYSST*VETVHN
Trigger: ATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGATAACTCTTGCCCCTaGTATCACAAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADDNSCP*YHKHSS
Trigger: ACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGGACAAGCACACTCTaGGTCATTTGTAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADRTSTL*VICKES
Trigger: GCTTTCTTTACAAATGACTCAGAGTGTGCTTGTCCT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGGAGGGAGAAGTGGCTaGTCCAGGTGGCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSGGRSG*SRWQGC
Trigger: ACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGGGAGCTCCATTTGTaGTCTTGGAGGGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGRELHL*SWREKW
Trigger: CCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGTTTGCGGTGGGATTTaGCGTTGGAATGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNVCGGI*RWNAPE
Trigger: CTCAGGTGCATTCCAACGGCAAATCCCACCGCAAAC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTGCCCATCACTCAGCTaGTTCACTCGTTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSCPSLS*FTRLRW
Trigger: CCACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGCTGACTGGAACTGCTaGCTTTTAACTTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVADWNC*LLTSLY
Trigger: ATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGTAAGGGCTGTATTTTaGCTTCAGTGGTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGVRAVF*LQWFPC
Trigger: GCAGGGAAACCACTGAAGCCAAAATACAGCCCTTAC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGTAAGGGCTGTATTTTaGCTTCAGTGGTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGVRAVF*LQWFPC
Trigger: GCAGGGAAACCACTGAAGCCAAAATACAGCCCTTAC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAACGGAGCAAAGAGGATaGAGGCAGGAGTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLITEQRG*RQEWRG
Trigger: TCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGT...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGGATACAGCAGTACTTaGGTCGAAACAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADGYSST*VETVHN
Trigger: ATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCTCGGCCTGGCTATCTaGGTTAAAGCGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGLGLAI*VKAKLT
Trigger: TGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGCCACTTTCAGAGCTTaGTGGCTGACTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGATFRA*WLTGTA
Trigger: AGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGAGISL*AVLGRN
Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAATGGCTGACTGGAACTaGTGGCTTTTAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGMADWN*WLLTSL
Trigger: AAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCAT...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCCGGGAGCTCCATTTGTaGTCTTGGAGGGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCRELHL*SWREKW
Trigger: CCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCG...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGATGTGCCAAACAACCTaGTACTTGTTGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVMCQTT*YLLCTH
Trigger: ATGTGTACACAACAAGTAGCAGGTTGTTTGGCACAT...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCGAGCATCTGCCATGTaGCAAACAACCTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNRASAM*QTTCYL
Trigger: CAAGTAGCAGGTTGTTTGGCACATGGCAGATGCTCG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTCCATCATCTCAACCTaGTGCTCCCGTGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNSIIST*CSREMW
Trigger: CCACATTTCACGGGAGCACCAGGTTGAGATGATGGA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTCTTCTTTGGGGGAATaGATACTCCAAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSSLGE*ILQMYG
Trigger: ACCATACATTTGGAGTATCCATTCCCCCAAAGAAGA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAAGCTTGATGGCTGACTaGAACTGCTGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSLMAD*NCWLLT
Trigger: AGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCT...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCTCCATTTGTGCTCTTaGAGGGAGAAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGLHLCS*REKWLL
Trigger: GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAGGATAGGATTTAATTaGACCAGCCCCATTACGAGC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGRIGFN*TSPITS
Trigger: GCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGTATTTTGGCTTCAGTaGTTTCCCTGCAACTCGATC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGVFWLQ*FPCNSI
Trigger: GATCGAGTTGCAGGGAAACCACTGAAGCCAAAATAC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTACGGAGCAAAGAGGATaGAGGCAGGAGTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSTEQRG*RQEWRG
Trigger: TCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGAGTTAAAGCGAAGCTaGCAGACATTACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADELKRS*QTLQEI
Trigger: TATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGCTTCCCTTTATCTTCTaGTTTGTCAGAGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGLPFIF*FVRVVA
Trigger: GGCAACAACTCTGACAAATCAGAAGATAAAGGGAAG...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTCAGAGCTTGATGGCTaGCTGGAACTGCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSSELDG*LELLAF
Trigger: AAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGAATGCACAAGAGGTaGAAAAATGTGCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADRMHKR*KNVQFR
Trigger: CCTAAATTGCACATTTTTGCACCTCTTGTGCATTCT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACAACGTATCGAGCATCTaGCATGTGCCAAACAACCTG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNNVSSI*HVPNNL
Trigger: CAGGTTGTTTGGCACATGGCAGATGCTCGATACGTT...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR CCA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGAGAACTACTGTCCACTaGAAAAGACATAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LVMCFSLELGDWVVGCILRTTVH*KRHKWF
Trigger: AAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCT...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGTGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCGT +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVWKEPF*VYFSLR
Trigger: ACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNPLRCP*KEPFWV
Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTGGCCTCAAACGTCTTaGGGTTTGCAGACGTTAGTA +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNWPQTS*GLQTLV
Trigger: TACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAAATTGGGGGACTGGGTaGTGGGCTGCATTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLINWGTG*WAAFCG
Trigger: CCCACAAAATGCAGCCCACCACCCAGTCCCCCAATT...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGGTGGGATTTGCCGTTaGAATGCACCTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSGGICR*NAPEPG
Trigger: CCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTTCACTCGTTTGCGGTaGGATTTGCCGTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGFTRLR*DLPLEC
Trigger: GCATTCCAACGGCAAATCCCACCGCAAACGAGTGAA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGGAAGGGTAGTAGTGTaGCATGTACTGCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGGRVVV*HVLPLL
Trigger: TAGCAGAGGCAGTACATGCCACACTACTACCCTTCC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR TCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGCCACTTTCAGAGCTTaGTGGCTGACTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIATFRA*WLTGTA
Trigger: AGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGGCTTTTTCTTCTTCTaGTTCAACAACAGTACCGGG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNGFFFF*FNNSTG
Trigger: CCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACACATTCCAGTCTTGTTaGTATCGGCTTAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNTFQSC*YRLRKG
Trigger: CCCCTTTCTAAGCCGATATCAACAAGACTGGAATGT...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACATACGTCCTGTAATTaGCGCTTAGCTCTAATTACT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGHTSCN*RLALIT
Trigger: AGTAATTAGAGCTAAGCGGCAATTACAGGACGTATG...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR GCA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGAGTTCACAGCCACTTTaGATAGTGAACAATAAAGTA +
Preference number: 4 (lower is better)
Translates to: KALVNLVMCFSLELGDWVSSQPL*IVNNKV
Trigger: TACTTTATTGTTCACTATGCAAAGTGGCTGTGAACT...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGTCCTGACCCCTTACTaGCATTCTGCATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNVLTPY*HSASLI
Trigger: GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGAC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGCAACTCGATCTTTATaGCTTCGGCTAGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNATRSL*LRLEMC
Trigger: GCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGAGGTGCAAAAATGTaGAATTTAGGAAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADRGAKM*NLGSSF
Trigger: AAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGAACTACTGTCCACTaGAAAAGACATAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADRTTVH*KRHKWF
Trigger: AAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGATACTCCAAATGTATaGTTAATAACCGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VAFFLNFLLASNVLGFADDTPNV*LITAFC
Trigger: GCAAAAAGCGGTTATTAACCATACATTTGGAGTATC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGATCTTCTTTGGGGGAATaGATACTCCAAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSSLGE*ILQMYG
Trigger: ACCATACATTTGGAGTATCCATTCCCCCAAAGAAGA...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGPLRCP*KEPFWV
Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTGGCCTCAAACGTCTTaGGGTTTGCAGACGTTAGTA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSWPQTS*GLQTLV
Trigger: TACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACTGGAATTGGGGGACTaGGTGGTGGGCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMELELGD*VVGCIL
Trigger: CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTAGCCTTCCCAGTTGCTaGCTTATTGCACTGCTCATT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGSLPSC*LIALLI
Trigger: AATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCT...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
3UTR CAA 72 bp GATACAGATCTAGTACTACACAGGATACAGCAGTACTaGGGTCGAAACAGTACACAATCCCTGTCAACAACA +
Preference number: 4 (lower is better)
Translates to: DTDLVLHRIQQY*GRNSTQSLSTT
Trigger: TGTTGTTGACAGGGATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTGTTCACGTCTGCATTTaGGCACTGTACGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSVHVCI*ALYEML
Trigger: TAACATCTCGTACAGTGCTCAAATGCAGACGTGAAC...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR TCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATCAGAGCTTGATGGCTaGCTGGAACTGCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLISELDG*LELLAF
Trigger: AAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAGCCACTTTCAGAGCTTaGTGGCTGACTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEATFRA*WLTGTA
Trigger: AGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGTGTTGTGCCAGATTTaGGGAGAAATGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGVLCQI*GEMSHF
Trigger: AAAGTGGCTCATTTCTCCTCAAATCTGGCACAACAC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEAGISL*AVLGRN
Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSAGISL*AVLGRN
Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGTCCTGACCCCTTACTaGCATTCTGCATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGVLTPY*HSASLI
Trigger: GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGAC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCTTCAGTGGTTTCCCTaGAACTCGATCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGLQWFP*NSIFMP
Trigger: AGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGTTTGTATACGTTTaGTTAGCAACACAAACCAGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGLFVYV*LATQTS
Trigger: ACTGGTTTGTGTTGCTAAGCAAACGTATACAAACAG...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCCAAGCCTTCCCAGTTaGTGGCTTATTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSPSLPS*WLIALL
Trigger: GAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAACCACGTTATATCAGTaGCGCTCCAAGCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMETTLYQ*RSKPSQ
Trigger: CTGGGAAGGCTTGGAGCGGCACTGATATAACGTGGT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGATGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCGT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGWKEPF*VYFSLR
Trigger: ACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGTGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCGT +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGWKEPF*VYFSLR
Trigger: ACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGTTGTTGCCTGTGATTaGAGTGATGGAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSVVACD*SDGAAG
Trigger: CCCAGCTGCTCCATCACTCCAATCACAGGCAACAAC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTAGCTTGATGGCTGACTaGAACTGCTGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSSLMAD*NCWLLT
Trigger: AGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACTCCATTTGTGCTCTTaGAGGGAGAAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMELHLCS*REKWLL
Trigger: GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGGATACAGCAGTACTTaGGTCGAAACAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNGYSST*VETVHN
Trigger: ATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCTTCCCTTTATCTTCTaGTTTGTCAGAGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGLPFIF*FVRVVA
Trigger: GGCAACAACTCTGACAAATCAGAAGATAAAGGGAAG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCGTGTTGTGCCAGATTTaGGGAGAAATGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCVLCQI*GEMSHF
Trigger: AAAGTGGCTCATTTCTCCTCAAATCTGGCACAACAC...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGTGTTGTGCCAGATTTaGGGAGAAATGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKVLCQI*GEMSHF
Trigger: AAAGTGGCTCATTTCTCCTCAAATCTGGCACAACAC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTGATAACTCTTGCCCCTaGTATCACAAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSDNSCP*YHKHSS
Trigger: ACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATC...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTTGTGTACACATTGTTaGAGAAGACATAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNLCTHC*RRHSPC
Trigger: ACAGGGACTATGTCTTCTTCAACAATGTGTACACAA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR GCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGTTAATAACCGCTTTTTaGACAGGATCCATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGLITAF*TGSIVL
Trigger: TAACACAATGGATCCTGTGCAAAAAGCGGTTATTAA...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCATGGCTGACTGGAACTaGTGGCTTTTAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCMADWN*WLLTSL
Trigger: AAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCAT...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAGTTCACAGCCACTTTaGATAGTGAACAATAAAGTA +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGSSQPL*IVNNKV
Trigger: TACTTTATTGTTCACTATGCAAAGTGGCTGTGAACT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCGTCCTGACCCCTTACTaGCATTCTGCATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCVLTPY*HSASLI
Trigger: GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGAC...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGATCTTCTGTACATTATTaGATTAGGGAGCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSSVHY*IREPQN
Trigger: ATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGA...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCCATGGGAGCATGACCTaGAATATATTCAGCGAACAG +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCHGSMT*NIFSEQ
Trigger: CTGTTCGCTGAATATATTGCAGGTCATGCTCCCATG...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGGAAGGGTAGTAGTGTaGCATGTACTGCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKGRVVV*HVLPLF
Trigger: AAACAAAGGCAGTACATGCCACACTACTACCCTTCC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR CCA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGATACTCCAAATGTATaGTTAATAACCGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QSLKALVNLVMCFSLELGDTPNV*LITAFC
Trigger: GCAAAAAGCGGTTATTAACCATACATTTGGAGTATC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGATACTCCAAATGTATaGTTAATAACCGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGDTPNV*LITAFC
Trigger: GCAAAAAGCGGTTATTAACCATACATTTGGAGTATC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAGGATAGGATTTAATTaGACCAGCCCCATTACGAGC +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCRIGFN*TSPITS
Trigger: GCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCT...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGTATTTTGGCTTCAGTaGTTTCCCTGCAACTCGATC +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKVFWLQ*FPCNSI
Trigger: GATCGAGTTGCAGGGAAACCACTGAAGCCAAAATAC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATGGCCTCAAACGTCTTaGGGTTTGCAGACGTTAGTA +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIWPQTS*GLQTLV
Trigger: TACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTTCCCTTTATCTTCTaGTTTGTCAGAGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKLPFIF*FVRVVA
Trigger: GGCAACAACTCTGACAAATCAGAAGATAAAGGGAAG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGGCTTTTTCTTCTTCTaGTTCAACAACAGTACCGGG +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIGFFFF*FNNSTG
Trigger: CCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCGATAACTCTTGCCCCTaGTATCACAAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCDNSCP*YHKHSS
Trigger: ACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATC...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGCAACTCGATCTTTATaGCTTCGGCTAGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIATRSL*LRLEMC
Trigger: GCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATACTTCAGTGGTTTCCCTaGAACTCGATCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLILQWFP*NSIFMP
Trigger: AGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAG...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTGTCTTCTTGCAGAATaGACAAGAGGTGCAAAAATG +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGCLLAE*TRGAKM
Trigger: CATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTGTCTTCTTGCAGAATaGACAAGAGGTGCAAAAATG +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSCLLAE*TRGAKM
Trigger: CATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTCTTCTTTGGGGGAATaGATACTCCAAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGSSLGE*ILQMYG
Trigger: ACCATACATTTGGAGTATCCATTCCCCCAAAGAAGA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTCTTCTTTGGGGGAATaGATACTCCAAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSSSLGE*ILQMYG
Trigger: ACCATACATTTGGAGTATCCATTCCCCCAAAGAAGA...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSPLRCP*KEPFWV
Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGCTGACTGGAACTGCTaGCTTTTAACTTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKADWNC*LLTSLY
Trigger: ATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTTTCTCAACTTCCTACTaGCCTCAAACGTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSFSTSY*PQTSWG
Trigger: ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAA...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATCAAATCCATCCCTGTaGCTGACTTCTGTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMESNPSL*LTSVLV
Trigger: AACTAGGACAGAAGTCAGTCACAGGGATGGATTTGA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAATGGCTGACTGGAACTaGTGGCTTTTAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEMADWN*WLLTSL
Trigger: AAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCAT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGTCCTGACCCCTTACTaGCATTCTGCATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSVLTPY*HSASLI
Trigger: GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGAC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGCAACTCGATCTTTATaGCTTCGGCTAGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSATRSL*LRLEMC
Trigger: GCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCTGTTTGTATACGTTTaGTTAGCAACACAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSLFVYV*LATQTS
Trigger: ACTGGTTTGTGTTGCTAAGCAAACGTATACAAACAG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTAGAATGCACAAGAGGTaGAAAAATGTGCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGRMHKR*KNVQFR
Trigger: CCTAAATTGCACATTTTTGCACCTCTTGTGCATTCT...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGTGTCTTCTTGCAGAATaGACAAGAGGTGCAAAAATG +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKCLLAE*TRGAKM
Trigger: CATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACATGGGAGCATGACCTaGAATATATTCAGCGAACAG +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEHGSMT*NIFSEQ
Trigger: CTGTTCGCTGAATATATTGCAGGTCATGCTCCCATG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGCTTGATGGCTGACTaGAACTGCTGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSSLMAD*NCWLLT
Trigger: AGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTTCATCATATCTTTCTaGAATGCAAGTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNFIISF*NASFAA
Trigger: AGCAGCAAAACTTGCATTCCAGAAAGATATGATGAA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACATTTTGTGGGTGAATaGGGGGTACTGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEHFVGE*GVLQHK
Trigger: TTTGTGTTGCAGTACCCCCCATTCACCCACAAAATG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR TCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGAGTTAAAGCGAAGCTaGCAGACATTACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKELKRS*QTLQEI
Trigger: TATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR TCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACTTCCCTTTATCTTCTaGTTTGTCAGAGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMELPFIF*FVRVVA
Trigger: GGCAACAACTCTGACAAATCAGAAGATAAAGGGAAG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTAGAGGTGCAAAAATGTaGAATTTAGGAAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSRGAKM*NLGSSF
Trigger: AAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAGAATGCACAAGAGGTaGAAAAATGTGCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCRMHKR*KNVQFR
Trigger: CCTAAATTGCACATTTTTGCACCTCTTGTGCATTCT...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAGCTGACTGGAACTGCTaGCTTTTAACTTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEADWNC*LLTSLY
Trigger: ATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGC...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTTCATCATATCTTTCTaGAATGCAAGTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGFIISF*NASFAA
Trigger: AGCAGCAAAACTTGCATTCCAGAAAGATATGATGAA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTATTCCATCTTCAAGATaGTTGTCAGGGCTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSIPSSR*LSGLKE
Trigger: CTCCTTAAGCCCTGACAACCATCTTGAAGATGGAAT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR TCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGAGTTAAAGCGAAGCTaGCAGACATTACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIELKRS*QTLQEI
Trigger: TATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCTTAATAACCGCTTTTTaGACAGGATCCATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCLITAF*TGSIVL
Trigger: TAACACAATGGATCCTGTGCAAAAAGCGGTTATTAA...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAGTTCACAGCCACTTTaGATAGTGAACAATAAAGTA +
Preference number: 4 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCSSQPL*IVNNKV
Trigger: TACTTTATTGTTCACTATGCAAAGTGGCTGTGAACT...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGAGAGGTGCAAAAATGTaGAATTTAGGAAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKRGAKM*NLGSSF
Trigger: AAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCT...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGTCTTCTGTACATTATTaGATTAGGGAGCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKSSVHY*IREPQN
Trigger: ATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGA...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGATACTCCAAATGTATaGTTAATAACCGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: CSMITLAPDITNIPVLLIDTPNV*LITAFC
Trigger: GCAAAAAGCGGTTATTAACCATACATTTGGAGTATC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAAAATCCTTTACATGCTaGCAACATTTTAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEKSFTC*QHFREG
Trigger: TCCTTCCCTAAAATGTTGCCAGCATGTAAAGGATTT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATTAATAACCGCTTTTTaGACAGGATCCATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMELITAF*TGSIVL
Trigger: TAACACAATGGATCCTGTGCAAAAAGCGGTTATTAA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR GCA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGTTCACAGCCACTTTaGATAGTGAACAATAAAGTA +
Preference number: 4 (lower is better)
Translates to: LQVADIDALKESTLFCCSSSQPL*IVNNKV
Trigger: TACTTTATTGTTCACTATGCAAAGTGGCTGTGAACT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR GCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATCTTCTGTACATTATTaGATTAGGGAGCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMESSVHY*IREPQN
Trigger: ATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CCA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAAGAACTACTGTCCACTaGAAAAGACATAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMERTTVH*KRHKWF
Trigger: AAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS TCA 90 bp GGCGGTGGAGGTGGCGCGGGCGACAGCTCGGCCCGGCGCGGCCCCTaGACTGTCCAACTCTTGCCCGCGCCGGGCTTAAGCGCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: GGGGGAGDSSARRGP*TVQLLPAPGLSARP
Trigger: CGGCCGGGCGCTTAAGCCCGGCGCGGGCAAGAGTTGGACAGTTCAGGGGCCGCGCCGGGCCGAGCTGTCGCCCGCGCCACCTCCACCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CCA 90 bp GGGGCAGTGGCTCCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTaGTTGCTGCGGTCCCGCCAGGGCTGCACCGGGGCTTCGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GAVAPPAGKLLLTLR*LLRSRQGCTGASRR
Trigger: TCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 90 bp TGGCTCCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTGGTTGCTaGGGTCCCGCCAGGGCTGCACCGGGGCTTCGCGCAGACGTTCTC +
Preference number: 5 (lower is better)
Translates to: WLLQPGSCCSRSGGC*GPARAAPGLRADVL
Trigger: GAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 90 bp CAGTGGCTCCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTGGTTaGTGCGGTCCCGCCAGGGCTGCACCGGGGCTTCGCGCAGACGTT +
Preference number: 5 (lower is better)
Translates to: QWLLQPGSCCSRSGG*CGPARAAPGLRADV
Trigger: AACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 90 bp AAGCTGTTGCTCACGCTCCGGTGGTTGCTGCGGTCCCGCCAGGGCTaGACCGGGGCTTCGCGCAGACGTTCTCCCGCGATCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KLLLTLRWLLRSRQG*TGASRRRSPAICCS
Trigger: GCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CCA 90 bp TGTACTGCCTGTGCTGCTGTTGCTGCTGGGGCTGGCCTGGGCGGGTaGTGGGGGCTGCCCATCACTCAGCTGCTTCACTCGTTTGCGGTG +
Preference number: 5 (lower is better)
Translates to: CTACAAVAAGAGLGG*WGLPITQLLHSFAV
Trigger: CACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCACAGGCAGTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS TCA 90 bp CCCGGGGTTTGGACGTGCCAACGCCACTCTCGCGCGCCGAAGCTGTaGCGGTTTACTAAGCAGAGACTTGCGAGGCACACAGAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: PGVWTCQRHSRAPKL*RFTKQRLARHTERE
Trigger: TTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAACCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CCA 90 bp CTTCTTCTGATTCAACAACAGTACCGGGAGCTCCATTTGTGCTCTTaGAGGGAGAAGTGGCTGCTCCAGGTGGCAGGGGTGTTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LLLIQQQYRELHLCS*REKWLLQVAGVLCQ
Trigger: CTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACCTCACGCTCCGGTGGTaGCTGCGGTCCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNLTLRW*LRSRQG
Trigger: GCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAG...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS TCA 90 bp AGGGAGAAGTGGCTGCTCCAGGTGGCAGGGGTGTTGTGCCAGATTTaGGGAGAAATGAGCCACTTTCAGAGCTTGATGGCTGACTGGAAC +
Preference number: 5 (lower is better)
Translates to: REKWLLQVAGVLCQI*GEMSHFQSLMADWN
Trigger: GTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
ENST00000475539.5
CDS-3UTR CAA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGCAGCGCTACCGAGACTaGGCTCCAGCCCTGATTATC +
Preference number: 5 (lower is better)
Translates to: LVMCFSLELGDWVVGCILQRYRD*APALII
Trigger: GATAATCAGGGCTGGAGCCAAGTCTCGGTAGCGCTG...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 90 bp GGCTCCAGCCCTGATTATCTGTGTGACAGCACCACGTTATATCAGTaGCGCTCCAAGCCTTCCCAGTTGCTGGCTTATTGCACTGCTCAT +
Preference number: 5 (lower is better)
Translates to: GSSPDYLCDSTTLYQ*RSKPSQLLAYCTAH
Trigger: ATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGATATAACGTGGTGCTGTCACACAGATAATCAGGGCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CCA 90 bp ATCATCAGGGTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTAGTGTaGCATGTACTGCCGAGCATCTGCCATGTGCCAAACAACCTGCTA +
Preference number: 5 (lower is better)
Translates to: IIRVGVRTRAGRVVV*HVLPSICHVPNNLL
Trigger: TAGCAGGTTGTTTGGCACATGGCAGATGCTCGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439340.1
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGTGTTTCTCTCTGGAATaGGGGGACTGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVCFSLE*GDWVVG
Trigger: GCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACA...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS GCA 90 bp CTTTTTCTTCTTCTGATTCAACAACAGTACCGGGAGCTCCATTTGTaGTCTTGGAGGGAGAAGTGGCTGCTCCAGGTGGCAGGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LFLLLIQQQYRELHL*SWREKWLLQVAGVL
Trigger: CAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGTACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVYRELH*CSWREK
Trigger: CTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTA...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVAFALS*EGTILG
Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCAAACGTCTTGGGGTTaGCAGACGTTAGTACGGAGC +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADQTSWG*QTLVRS
Trigger: GCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGTGTTTCTCTCTGGAATaGGGGGACTGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGCFSLE*GDWVVG
Trigger: GCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACA...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCCAGCCGGGAAGCTGTaGCTCACGCTCCGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSPAGKL*LTLRWL
Trigger: CAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTCCAAGCCTTCCCAGTaGCTGGCTTATTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSKPSQ*LAYCTA
Trigger: AGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 90 bp TGGATCCATCTCCCATGCCGCTGCCAGATCAACGTATCGAGCATCTaGCATGTGCCAAACAACCTGCTACTTGTTGTGTACACATTGTTG +
Preference number: 5 (lower is better)
Translates to: WIHLPCRCQINVSSI*HVPNNLLLVVYTLL
Trigger: CAACAATGTGTACACAACAAGTAGCAGGTTGTTTGGCACATGGCAGATGCTCGATACGTTGATCTGGCAGCGGCATGGGAGATGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409692.5
ENST00000466398.5
CDS GCA 90 bp GTGACAGCACCACGTTATATCAGTGCCGCTCCAAGCCTTCCCAGTTaGTGGCTTATTGCACTGCTCATTGAAAATCCTTTACATGCTGGC +
Preference number: 5 (lower is better)
Translates to: VTAPRYISAAPSLPS*WLIALLIENPLHAG
Trigger: GCCAGCATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGATATAACGTGGTGCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 90 bp TGTGGCATGTACTGCCTAGTTTTCAGCCATGAGATCTCTGGCAGATaGCTCAGTGATTATAGTGGCAGTAATGCTCGGCATCCCGACACA +
Preference number: 5 (lower is better)
Translates to: CGMYCLVFSHEISGR*LSDYSGSNARHPDT
Trigger: TGTGTCGGGATGCCGAGCATTACTGCCACTATAATCACTGAGGCATCTGCCAGAGATCTCATGGCTGAAAACTAGGCAGTACATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457304.5
CDS-3UTR CAA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGTGTTTAGATCCTGTGTaGTGTGCCTCTAGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LVMCFSLELGDWVVGCILCLDPV*CASSCD
Trigger: GTCACAGCTAGAGGCACACAACACAGGATCTAAACA...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAAGCTGCTTCACTCGTTaGCGGTGGGATTTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSCFTR*RWDLPL
Trigger: CAACGGCAAATCCCACCGCAAACGAGTGAAGCAGCT...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CCA 90 bp ACAGCACCACGTTATATCAGTGCCGCTCCAAGCCTTCCCAGTTGCTaGCTTATTGCACTGCTCATTGAAAATCCTTTACATGCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: TAPRYISAAPSLPSC*LIALLIENPLHAGN
Trigger: GTTGCCAGCATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGATATAACGTGGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAGCCACTTTCAGAGCTaGATGGCTGACTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGSHFQS*MADWNC
Trigger: GCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAAGCCACTTTCAGAGCTaGATGGCTGACTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGSHFQS*MADWNC
Trigger: GCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTGTTTAGATCCTGTGTaGTGTGCCTCTAGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADCLDPV*CASSCD
Trigger: GTCACAGCTAGAGGCACACAACACAGGATCTAAACA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGGCTTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LVMCFSLELGDWVVGCILASTMV*CLDPVL
Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAAGC...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACAAACGTCTTGGGGTTaGCAGACGTTAGTACGGAGC +
Preference number: 5 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGQTSWG*QTLVRS
Trigger: GCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTG...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTGTTTCTCTCTGGAATaGGGGGACTGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNCFSLE*GDWVVG
Trigger: GCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTGGGCTGCATTTTGAGGATACAGCAGTACTaGGGTCGAAACAGTACACAA +
Preference number: 5 (lower is better)
Translates to: LVMCFSLELGDWVVGCILRIQQY*GRNSTQ
Trigger: TTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCT...CAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCCAGTTTTAATCTCTTaGGATCCATCTCCCATGCCG +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADPVLIS*DPSPMP
Trigger: CGGCATGGGAGATGGATCCAAAGAGATTAAAACTGG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409692.5
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCGAGGACCCCGGGGTTaGGACGTGCCAACGCCACTC +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSRGPRG*DVPTPL
Trigger: GAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTCG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS TCA 90 bp TGCCGCTCCAAGCCTTCCCAGTTGCTGGCTTATTGCACTGCTCATTaGAAATCCTTTACATGCTGGCAACATTTTAGGGAAGGACAAGCA +
Preference number: 5 (lower is better)
Translates to: CRSKPSQLLAYCTAH*KSFTCWQHFREGQA
Trigger: TGCTTGTCCTTCCCTAAAATGTTGCCAGCATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 90 bp CTGTCCACTGGAAAAGACATAAATGGTTTGATATCCAGTGAAGGCTaGATCATCAGGGTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTA +
Preference number: 5 (lower is better)
Translates to: LSTGKDINGLISSEG*IIRVGVRTRAGRVV
Trigger: TACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000439340.1
ENST00000457304.5
ENST00000463918.1
ENST00000466398.5
ENST00000469551.5
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNYRELH*CSWREK
Trigger: CTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGAGGATACAGCAGTACTaGGGTCGAAACAGTACACAA +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVRIQQY*GRNSTQ
Trigger: TTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCT...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS TCA 90 bp AGAACTACTGTCCACTGGAAAAGACATAAATGGTTTGATATCCAGTaGAGGCTGCATCATCAGGGTAGGTGTGCGCACAAGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RTTVHWKRHKWFDIQ*RLHHQGRCAHKSRK
Trigger: CTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000439340.1
ENST00000457304.5
ENST00000463918.1
ENST00000466398.5
ENST00000469551.5
CDS TCA 90 bp CAGAGGAAGCAGAGAATGCAGGAAGAAAGACCACCACATAGGTACTaGAGAAGAGATGCTGTGGTTGAGATTTGTTTTCCTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QRKQRMQEERPPHRY*RRDAVVEICFPLSW
Trigger: CCAGGAGAGAGGAAAACAAATCTCAACCACAGCATCTCTTCTTCAGTACCTATGTGGTGGTCTTTCTTCCTGCATTCTCTGCTTCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495289.1
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACAGTGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSALTF*ACLLPL
Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACT...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGAGTGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVSALTF*ACLLPL
Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACT...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGTGTTTAGATCCTGTGTaGTGTGCCTCTAGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGCLDPV*CASSCD
Trigger: GTCACAGCTAGAGGCACACAACACAGGATCTAAACA...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNSEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS TCA 90 bp TGTACTGCATGTGTAACCCTCCAAAACGTCTCAAATCCATCCCTGTaGCTGACTTCTGTCCTAGTTCAGACCCTCATCTCTTCACATCAT +
Preference number: 5 (lower is better)
Translates to: CTACVTLQNVSNPSL*LTSVLVQTLISSHH
Trigger: ATGATGTGAAGAGATGAGGGTCTGAACTAGGACAGAAGTCAGTCACAGGGATGGATTTGAGACGTTTTGGAGGGTTACACATGCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409692.5
ENST00000466398.5
CDS TCA 90 bp CCTTGGCTTGCGGCTCCTTCCTTCCCATCTGAGTTAAAGCGAAGCTaGCAGACATTACAAGAAATAACTTGTTTCTTCTTTGGGGGAATG +
Preference number: 5 (lower is better)
Translates to: PWLAAPSFPSELKRS*QTLQEITCFFFGGM
Trigger: CATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATGGGAAGGAAGGAGCCGCAAGCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS TCA 90 bp AGAGGTTGCCCACATTCCTTGGCTTGCGGCTCCTTCCTTCCCATCTaGGTTAAAGCGAAGCTGACAGACATTACAAGAAATAACTTGTTT +
Preference number: 5 (lower is better)
Translates to: RGCPHSLACGSFLPI*VKAKLTDITRNNLF
Trigger: AAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATGGGAAGGAAGGAGCCGCAAGCCAAGGAATGTGGGCAACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTTAATAACCGCTTTTaGCACAGGATCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVVNNRF*HRIHCV
Trigger: AACACAATGGATCCTGTGCAAAAAGCGGTTATTAAC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSAFALS*EGTILG
Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGTCTGATTTGTCAGAGTaGTTGCCTGTGATTGGAGTG +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGSDLSE*LPVIGV
Trigger: CACTCCAATCACAGGCAACAACTCTGACAAATCAGA...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGTACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKYRELH*CSWREK
Trigger: CTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTA...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGAGCTTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VSKSPRQSSDVFLSGIGGASTMV*CLDPVL
Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAAGC...TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCTGGCCTCAAACGTCTaGGGGTTTGCAGACGTTAGT +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGLASNV*GFADVS
Trigger: ACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGSEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACCTAGAATACACCCAGTaGGATACCAGAGTTATTTAC +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADLEYTQ*DTRVIY
Trigger: GTAAATAACTCTGGTATCCAACTGGGTGTATTCTAG...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACTCTGTTTGTATACGTTaGCTTAGCAACACAAACCAG +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADSVCIR*LSNTNQ
Trigger: CTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGA...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGCCAGTTGCTGGCTTATaGCACTGCTCATTGAAAATC +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGPVAGL*HCSLKI
Trigger: GATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGG...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS TCA 90 bp GTGCCAGATTTGAGGAGAAATGAGCCACTTTCAGAGCTTGATGGCTaGCTGGAACTGCTGGCTTTTAACTTCCCTTTATCTTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: VPDLRRNEPLSELDG*LELLAFNFPLSSDL
Trigger: CAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000475539.5
CDS TCA 90 bp GTGCCAGATTTGAGGAGAAATGAGCCACTTTCAGAGCTTGATGGCTaGCTGGAACTGCTGGCTTTTAACTTCCCTTTATCTTATCTGAGT +
Preference number: 5 (lower is better)
Translates to: VPDLRRNEPLSELDG*LELLAFNFPLSYLS
Trigger: ACTCAGATAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469551.5
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGCCTTTATCTTCTGATTaGTCAGAGTTGTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGPLSSD*SELLPV
Trigger: CACAGGCAACAACTCTGACAAATCAGAAGATAAAGG...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGAGCCACTTTCAGAGCTaGATGGCTGACTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKSHFQS*MADWNC
Trigger: GCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCCAAACGTCTTGGGGTTaGCAGACGTTAGTACGGAGC +
Preference number: 5 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCQTSWG*QTLVRS
Trigger: GCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTG...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCAAACGTCTTGGGGTTaGCAGACGTTAGTACGGAGC +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKQTSWG*QTLVRS
Trigger: GCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTTGTTTCTCTCTGGAATaGGGGGACTGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSCFSLE*GDWVVG
Trigger: GCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACA...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCTCTGAGATACACAAATaGAACGCGGTAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCSEIHK*NAVGWG
Trigger: CCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGA...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp GTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTGGGGTTTGCAGACGTCCACTCTATTTTGTaGTTCTATGATAACTCTTGC +
Preference number: 5 (lower is better)
Translates to: VAFFLNFLLASNVLGFADVHSIL*FYDNSC
Trigger: GCAAGAGTTATCATAGAACAACAAAATAGAGTGGAC...GTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGACTGGGTGGTCCACTCTATTTTGTaGTTCTATGATAACTCTTGC +
Preference number: 5 (lower is better)
Translates to: KALVNLVMCFSLELGDWVVHSIL*FYDNSC
Trigger: GCAAGAGTTATCATAGAACAACAAAATAGAGTGGAC...CACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS CCA 90 bp AAGCCCCGTAGAAAATTTGCCATATTCATGATTCCATCTTCAAGATaGTTGTCAGGGCTTAAGGAGTACCTCATGCATTGGGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: KPRRKFAIFMIPSSR*LSGLKEYLMHWVVF
Trigger: GAACACAACCCAATGCATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410066.7
ENST00000438871.2
ENST00000451732.6
CDS CCA 90 bp GAAATAACTTGTTTCTTCTTTGGGGGAATGGATACTCCAAATGTATaGTTAATAACCGCTTTTTGCACAGGATCCATCTGGGACAGCGCC +
Preference number: 5 (lower is better)
Translates to: EITCFFFGGMDTPNV*LITAFCTGSIWDSA
Trigger: GGCGCTGTCCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495289.1
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGTTCACGTCTGCATTaGAGCACTGTACGAGATGTT +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGRSRLH*STVRDV
Trigger: AACATCTCGTACAGTGCTCAAATGCAGACGTGAACG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGGTTAATAACCGCTTTTaGCACAGGATCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGVNNRF*HRIHCV
Trigger: AACACAATGGATCCTGTGCAAAAAGCGGTTATTAAC...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTCTGATTTGTCAGAGTaGTTGCCTGTGATTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNSDLSE*LPVIGV
Trigger: CACTCCAATCACAGGCAACAACTCTGACAAATCAGA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEYRELH*CSWREK
Trigger: CTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGCTTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNASTMV*CLDPVL
Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAAGC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATACTGGCCTCAAACGTCTaGGGGTTTGCAGACGTTAGT +
Preference number: 5 (lower is better)
Translates to: CSMITLAPDITNIPVLLILASNV*GFADVS
Trigger: ACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAG...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACTGGCATGTACTGCCTTaGTTTTTAAGGTTACAGTCC +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNWHVLP*FLRLQS
Trigger: GGACTGTAACCTTAAAAACAAAGGCAGTACATGCCA...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336917.9
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEAFALS*EGTILG
Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTGATTTGTCAGAGTTGTaGCCTGTGATTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGDLSEL*PVIGVM
Trigger: CATCACTCCAATCACAGGCAACAACTCTGACAAATC...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTGATTTGTCAGAGTTGTaGCCTGTGATTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSDLSEL*PVIGVM
Trigger: CATCACTCCAATCACAGGCAACAACTCTGACAAATC...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTTCTGATTTGTCAGAGTaGTTGCCTGTGATTGGAGTG +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGSDLSE*LPVIGV
Trigger: CACTCCAATCACAGGCAACAACTCTGACAAATCAGA...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTAGCCACTTTCAGAGCTaGATGGCTGACTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSSHFQS*MADWNC
Trigger: GCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGTGTTTAGATCCTGTGTaGTGTGCCTCTAGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKCLDPV*CASSCD
Trigger: GTCACAGCTAGAGGCACACAACACAGGATCTAAACA...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTAGGATACAGCAGTACTaGGGTCGAAACAGTACACAA +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGRIQQY*GRNSTQ
Trigger: TTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCT...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp CAGTCTCTAAAAGCCCTCGTCAATCTAGTGATGTGTTTCTCTCTGGAATTGGGGAAATACATGGATTCATaGTCTTCTTGCAGAATGCAC +
Preference number: 5 (lower is better)
Translates to: QSLKALVNLVMCFSLELGKYMDS*SSCRMH
Trigger: GTGCATTCTGCAAGAAGACAATGAATCCATGTATTT...CCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACAAAGACATAAATGGTTaGATATCCAGTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNKDING*ISSEGC
Trigger: GCAGCCTTCACTGGATATCAAACCATTTATGTCTTT...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCGAAACGTTAATAACCGCTTTTaGCACAGGATCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: TRDTDLVLHRIQQYLGRNVNNRF*HRIHCV
Trigger: AACACAATGGATCCTGTGCAAAAAGCGGTTATTAAC...GTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGGATTTGTCAGAGTTGTaGCCTGTGATTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKDLSEL*PVIGVM
Trigger: CATCACTCCAATCACAGGCAACAACTCTGACAAATC...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCTCTGATTTGTCAGAGTaGTTGCCTGTGATTGGAGTG +
Preference number: 5 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCSDLSE*LPVIGV
Trigger: CACTCCAATCACAGGCAACAACTCTGACAAATCAGA...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTCCTTTATCTTCTGATTaGTCAGAGTTGTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGPLSSD*SELLPV
Trigger: CACAGGCAACAACTCTGACAAATCAGAAGATAAAGG...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS CCA 90 bp GAAATAACTTGTTTCTTCTTTGGGGGAATGGATACTCCAAATGTATaGTTAATAACCGCTTTTTGCACAGGATCCATCTCTGCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: EITCFFFGGMDTPNV*LITAFCTGSISARK
Trigger: CTTCCTAGCAGAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475539.5
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTAAAGACATAAATGGTTaGATATCCAGTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSKDING*ISSEGC
Trigger: GCAGCCTTCACTGGATATCAAACCATTTATGTCTTT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AATACATGGATTCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCCCTTTATCTTCTGATTaGTCAGAGTTGTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: NTWIHCLLAECTRGAKMCPLSSD*SELLPV
Trigger: CACAGGCAACAACTCTGACAAATCAGAAGATAAAGG...GCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAGCTTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CSMITLAPDITNIPVLLIASTMV*CLDPVL
Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAAGC...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTCTAGAATACACCCAGTaGGATACCAGAGTTATTTAC +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSLEYTQ*DTRVIY
Trigger: GTAAATAACTCTGGTATCCAACTGGGTGTATTCTAG...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCCATCTTCAAGATGGTaGTCAGGGCTTAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSPSSRW*SGLKEY
Trigger: GTACTCCTTAAGCCCTGACAACCATCTTGAAGATGG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATAAGTGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: CSMITLAPDITNIPVLLISALTF*ACLLPL
Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACT...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGATTTGTCAGAGTTGTaGCCTGTGATTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSDLSEL*PVIGVM
Trigger: CATCACTCCAATCACAGGCAACAACTCTGACAAATC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TCATTGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTAGAATACACCCAGTaGGATACCAGAGTTATTTAC +
Preference number: 5 (lower is better)
Translates to: SLSSCRMHKRCKNVQFRKLEYTQ*DTRVIY
Trigger: GTAAATAACTCTGGTATCCAACTGGGTGTATTCTAG...CTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp ATTCAGACAAGAGATACAGATCTAGTACTACACAGGATACAGCAGTACTTGGGTAAATACATGGATTCATaGTCTTCTTGCAGAATGCAC +
Preference number: 5 (lower is better)
Translates to: IQTRDTDLVLHRIQQYLGKYMDS*SSCRMH
Trigger: GTGCATTCTGCAAGAAGACAATGAATCCATGTATTT...ACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTCTTCTTGCAGAATGCACAAGAGGTGCAAAAATGTGCAATTTAGGAAGCTCTAAATACATGGATTCATaGTCTTCTTGCAGAATGCAC +
Preference number: 5 (lower is better)
Translates to: CLLAECTRGAKMCNLGSSKYMDS*SSCRMH
Trigger: GTGCATTCTGCAAGAAGACAATGAATCCATGTATTT...AGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAAGTGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMESALTF*ACLLPL
Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACCTTTATCTTCTGATTaGTCAGAGTTGTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEPLSSD*SELLPV
Trigger: CACAGGCAACAACTCTGACAAATCAGAAGATAAAGG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATACTAGAATACACCCAGTaGGATACCAGAGTTATTTAC +
Preference number: 5 (lower is better)
Translates to: CSMITLAPDITNIPVLLILEYTQ*DTRVIY
Trigger: GTAAATAACTCTGGTATCCAACTGGGTGTATTCTAG...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TGTTCTATGATAACTCTTGCCCCTGATATCACAAACATTCCAGTCTTGTTGATATCTGTTTGTATACGTTaGCTTAGCAACACAAACCAG +
Preference number: 5 (lower is better)
Translates to: CSMITLAPDITNIPVLLISVCIR*LSNTNQ
Trigger: CTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGA...TATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS TCA 90 bp ACTGCCTTTGTTTTTAAGGTTACAGTCCACGTTCACGTCTGCATTTaGGCACTGTACGAGATGTTACATTTAAAAGTAAATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: TAFVFKVTVHVHVCI*ALYEMLHLKVNNSI
Trigger: GATGGAATTATTTACTTTTAAATGTAACATCTCGTACAGTGCTCAAATGCAGACGTGAACGTGGACTGTAACCTTAAAAACAAAGGCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336917.9
ENST00000469551.5
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAAAAAGACATAAATGGTTaGATATCCAGTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEKDING*ISSEGC
Trigger: GCAGCCTTCACTGGATATCAAACCATTTATGTCTTT...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGTTAATAACCGCTTTTaGCACAGGATCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSVNNRF*HRIHCV
Trigger: AACACAATGGATCCTGTGCAAAAAGCGGTTATTAAC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAACACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMEHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTCACAAACTGCTTAAATaGCTGAATCCTTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSHKLLK*LNPCGF
Trigger: AAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp AAGTCTGTCAGGAAAATATTCCATATTGTTTTAAGCCAGATCATACCCATGGAATCTGTTTGTATACGTTaGCTTAGCAACACAAACCAG +
Preference number: 5 (lower is better)
Translates to: KSVRKIFHIVLSQIIPMESVCIR*LSNTNQ
Trigger: CTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGA...TTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS-3UTR CAA 90 bp TTACAGGTTGCAGATATAGATGCTCTAAAAGAGTCCACTCTATTTTGTTGTTCTGTCCACTCTATTTTGTaGTTCTATGATAACTCTTGC +
Preference number: 5 (lower is better)
Translates to: LQVADIDALKESTLFCCSVHSIL*FYDNSC
Trigger: GCAAGAGTTATCATAGAACAACAAAATAGAGTGGAC...AGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000410066.7
CDS GCA 72 bp TGCACCGGGGCTTCGCGCAGACGTTCTCCCGCGATCTaGTGCAGCCCAGGCGGTGGCGGTGGCGGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: CTGASRRRSPAI*CSPGGGGGGSS
Trigger: GCTGCTACCGCCACCGCCACCGCCTGGGCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 72 bp CTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTGGTTaGTGCGGTCCCGCCAGGGCTGCACCGGGGCTTCGC +
Preference number: 6 (lower is better)
Translates to: LQPGSCCSRSGG*CGPARAAPGLR
Trigger: GCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CCA 72 bp GCTCCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTaGTTGCTGCGGTCCCGCCAGGGCTGCACCGGGGCT +
Preference number: 6 (lower is better)
Translates to: APPAGKLLLTLR*LLRSRQGCTGA
Trigger: AGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CAA 72 bp CCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTGGTaGCTGCGGTCCCGCCAGGGCTGCACCGGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: PPAGKLLLTLRW*LRSRQGCTGAS
Trigger: CGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CAA 90 bp GCAGTGGCTCCTCCAGCCGGGAAGCTGTTGCTCACGCTCCGGTGGTaGCTGCGGTCCCGCCAGGGCTGCACCGGGGCTTCGCGCAGACGT +
Preference number: 6 (lower is better)
Translates to: AVAPPAGKLLLTLRW*LRSRQGCTGASRRR
Trigger: ACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACCGGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CAA 90 bp AGAGCAGGAAGGGTAGTAGTGTGGCATGTACTGCCTGTGCTGCTGTaGCTGCTGGGGCTGGCCTGGGCGGGTGGTGGGGGCTGCCCATCA +
Preference number: 6 (lower is better)
Translates to: RAGRVVVWHVLPVLL*LLGLAWAGGGGCPS
Trigger: TGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCACAGGCAGTACATGCCACACTACTACCCTTCCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS CAA 90 bp GCCACTCTCGCGCGCCGAAGCTGTGACGGTTTACTAAGCAGAGACTaGCGAGGCACACAGAGAGGGAATGAGGCGGAACCGTTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: ATLARRSCDGLLSRD*RGTQRGNEAEPFGG
Trigger: GCCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAACCGTCACAGCTTCGGCGCGCGAGAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS TCA 72 bp TGGACGTGCCAACGCCACTCTCGCGCGCCGAAGCTGTaGCGGTTTACTAAGCAGAGACTTGCGAGGCACACA +
Preference number: 6 (lower is better)
Translates to: WTCQRHSRAPKL*RFTKQRLARHT
Trigger: TGTGTGCCTCGCAAGTCTCTGCTTAGTAAACCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 72 bp GTGGGGGCTGCCCATCACTCAGCTGCTTCACTCGTTTaGGGTGGGATTTGCCGTTGGAATGCACCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: VGAAHHSAASLV*GGICRWNAPEP
Trigger: AGGCTCAGGTGCATTCCAACGGCAAATCCCACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410066.7
ENST00000451732.6
CDS CAA 72 bp GCGCGCCGAAGCTGTGACGGTTTACTAAGCAGAGACTaGCGAGGCACACAGAGAGGGAATGAGGCGGAACCG +
Preference number: 6 (lower is better)
Translates to: ARRSCDGLLSRD*RGTQRGNEAEP
Trigger: CGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAACCGTCACAGCTTCGGCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410066.7
CDS GCA 72 bp GGGAGCTCCATTTGTGCTCTTGGAGGGAGAAGTGGCTaGTCCAGGTGGCAGGGGTGTTGTGCCAGATTTGAG +
Preference number: 6 (lower is better)
Translates to: GSSICALGGRSG*SRWQGCCARFE
Trigger: CTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS GCA 72 bp CATCACTCAGCTGCTTCACTCGTTTGCGGTGGGATTTaGCGTTGGAATGCACCTGAGCCTGGGCTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: HHSAASLVCGGI*RWNAPEPGLQS
Trigger: ACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGCAAACGAGTGAAGCAGCTGAGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410066.7
ENST00000451732.6
CDS CCA 72 bp TCAGCTGCTTCACTCGTTTGCGGTGGGATTTGCCGTTaGAATGCACCTGAGCCTGGGCTGCAGAGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SAASLVCGGICR*NAPEPGLQSSA
Trigger: AGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGCAAACGAGTGAAGCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410066.7
ENST00000451732.6
CDS CCA 72 bp GTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTAGTGTaGCATGTACTGCCTCTGCTAGGAAGTCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: VGVRTRAGRVVV*HVLPLLGSPLH
Trigger: GTGGAGTGGACTTCCTAGCAGAGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CCA 72 bp GTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTAGTGTaGCATGTACTGCCGAGCATCTGCCATGTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: VGVRTRAGRVVV*HVLPSICHVPN
Trigger: GTTTGGCACATGGCAGATGCTCGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439340.1
CDS GCA 72 bp CTTCTGATTCAACAACAGTACCGGGAGCTCCATTTGTaGTCTTGGAGGGAGAAGTGGCTGCTCCAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LLIQQQYRELHL*SWREKWLLQVA
Trigger: TGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS CAA 90 bp TGGCTTTTTCTTCTTCTGATTCAACAACAGTACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAGTGGCTGCTCCAGGTGGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: WLFLLLIQQQYRELH*CSWREKWLLQVAGV
Trigger: CACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS GCA 72 bp CTCCCATGCCGCTGCCAGATCAACGTATCGAGCATCTaGCATGTGCCAAACAACCTGCTACTTGTTGTGTAC +
Preference number: 6 (lower is better)
Translates to: LPCRCQINVSSI*HVPNNLLLVVY
Trigger: GTACACAACAAGTAGCAGGTTGTTTGGCACATGGCAGATGCTCGATACGTTGATCTGGCAGCGGCATGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409692.5
ENST00000466398.5
CDS GCA 72 bp CAGGATCCATCTTGTTCTCCCCTTTATTCTGGTTTCTaGTTCCCCGGACAGCATGAACAGAGGCAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: QDPSCSPLYSGF*FPGQHEQRQAQ
Trigger: CTGGGCTTGCCTCTGTTCATGCTGTCCGGGGAAGCAGAAACCAGAATAAAGGGGAGAACAAGATGGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS CAA 72 bp CTTCTTCTGATTCAACAACAGTACCGGGAGCTCCATTaGTGCTCTTGGAGGGAGAAGTGGCTGCTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LLLIQQQYRELH*CSWREKWLLQV
Trigger: CACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS CAA 72 bp GTATGTGACCAGGATAATGCACAGCGCTACCGAGACTaGGCTCCAGCCCTGATTATCTGTGTGACAGCACCA +
Preference number: 6 (lower is better)
Translates to: VCDQDNAQRYRD*APALIICVTAP
Trigger: TGGTGCTGTCACACAGATAATCAGGGCTGGAGCCAAGTCTCGGTAGCGCTGTGCATTATCCTGGTCACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 72 bp CCTGATTATCTGTGTGACAGCACCACGTTATATCAGTaGCGCTCCAAGCCTTCCCAGTTGCTGGCTTATTGC +
Preference number: 6 (lower is better)
Translates to: PDYLCDSTTLYQ*RSKPSQLLAYC
Trigger: GCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGATATAACGTGGTGCTGTCACACAGATAATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CAA 90 bp ATCCTTGTGGCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTaGGGGTTTGCAGACGTTAGTACGGAGCAAAGAGGATGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: ILVAFFLNFLLASNV*GFADVSTEQRGWRQ
Trigger: CTGCCTCCATCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCACAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS CCA 72 bp TGTCTTTTCCAGCTTCTAGAGGTTGCCCACATTCCTTaGCTTGCGGCTCCTTCCTTCCCATCTGAGTTAAAG +
Preference number: 6 (lower is better)
Translates to: CLFQLLEVAHIP*LAAPSFPSELK
Trigger: CTTTAACTCAGATGGGAAGGAAGGAGCCGCAAGCCAAGGAATGTGGGCAACCTCTAGAAGCTGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS CAA 72 bp TCAGTGCCGCTCCAAGCCTTCCCAGTTGCTGGCTTATaGCACTGCTCATTGAAAATCCTTTACATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SVPLQAFPVAGL*HCSLKILYMLA
Trigger: TGCCAGCATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CAA 90 bp AAACTTCCAGTATGTGACCAGGATAATGCACAGCGCTACCGAGACTaGGCTCCAGCCCTGATTATCTGTGTGACAGCACCACGTTATATC +
Preference number: 6 (lower is better)
Translates to: KLPVCDQDNAQRYRD*APALIICVTAPRYI
Trigger: GATATAACGTGGTGCTGTCACACAGATAATCAGGGCTGGAGCCAAGTCTCGGTAGCGCTGTGCATTATCCTGGTCACATACTGGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CCA 72 bp GTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTAGTGTaGCATGTACTGCCTTTGTTTTTAAGGTTACAGTCC +
Preference number: 6 (lower is better)
Translates to: VGVRTRAGRVVV*HVLPLFLRLQS
Trigger: GGACTGTAACCTTAAAAACAAAGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336917.9
ENST00000469551.5
CDS CCA 72 bp GTAGGTGTGCGCACAAGAGCAGGAAGGGTAGTAGTGTaGCATGTACTGCCAAGAAGCATGTTTCTTAGCAAT +
Preference number: 6 (lower is better)
Translates to: VGVRTRAGRVVV*HVLPRSMFLSN
Trigger: ATTGCTAAGAAACATGCTTCTTGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463918.1
CDS CAA 72 bp ATTGGACCAGCCCCATTACGAGCTTCAACCATGGTCTaGTGTTTAGATCCTGTGTTGTGTGCCTCTAGCTGT +
Preference number: 6 (lower is better)
Translates to: IGPAPLRASTMV*CLDPVLCASSC
Trigger: ACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000469551.5
CDS CAA 72 bp GCTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTaGGGGTTTGCAGACGTTAGTACGGAGCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: AFFLNFLLASNV*GFADVSTEQRG
Trigger: TCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS TCA 72 bp CCACATTCCTTGGCTTGCGGCTCCTTCCTTCCCATCTaGGTTAAAGCGAAGCTGACAGACATTACAAGAAAT +
Preference number: 6 (lower is better)
Translates to: PHSLACGSFLPI*VKAKLTDITRN
Trigger: ATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATGGGAAGGAAGGAGCCGCAAGCCAAGGAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS GCA 72 bp GGAAAAGACATAAATGGTTTGATATCCAGTGAAGGCTaGATCATCAGGGTAGGTGTGCGCACAAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GKDINGLISSEG*IIRVGVRTRAG
Trigger: TCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000439340.1
ENST00000457304.5
ENST00000463918.1
ENST00000466398.5
ENST00000469551.5
CDS GCA 72 bp TGTGATTGGAGTGATGGAGCAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAACCATTTTGGGTTTATT +
Preference number: 6 (lower is better)
Translates to: CDWSDGAAGISL*AVLGRNHFGFI
Trigger: AATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000475539.5
ENST00000495289.1
CDS GCA 72 bp CCGCTCCAAGCCTTCCCAGTTGCTGGCTTATTGCACTaGTCATTGAAAATCCTTTACATGCTGGCAACATTT +
Preference number: 6 (lower is better)
Translates to: PLQAFPVAGLLH*SLKILYMLATF
Trigger: AAATGTTGCCAGCATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS GCA 72 bp TACTGCCTAGTTTTCAGCCATGAGATCTCTGGCAGATaGCTCAGTGATTATAGTGGCAGTAATGCTCGGCAT +
Preference number: 6 (lower is better)
Translates to: YCLVFSHEISGR*LSDYSGSNARH
Trigger: ATGCCGAGCATTACTGCCACTATAATCACTGAGGCATCTGCCAGAGATCTCATGGCTGAAAACTAGGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457304.5
CDS CCA 72 bp CTTTCTTTCTCAACTTCCTACTGGCCTCAAACGTCTTaGGGTTTGCAGACGTTAGTACGGAGCAAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: LSFSTSYWPQTS*GLQTLVRSKED
Trigger: ATCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
CDS CAA 72 bp TCATTACTGGACTCCTTCACTCCAGTTTTAATCTCTTaGGATCCATCTCCCATGCCGCTGCCAGATCAACGT +
Preference number: 6 (lower is better)
Translates to: SLLDSFTPVLIS*DPSPMPLPDQR
Trigger: ACGTTGATCTGGCAGCGGCATGGGAGATGGATCCAAAGAGATTAAAACTGGAGTGAAGGAGTCCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409692.5
ENST00000466398.5
CDS CCA 72 bp CGTTATATCAGTGCCGCTCCAAGCCTTCCCAGTTGCTaGCTTATTGCACTGCTCATTGAAAATCCTTTACAT +
Preference number: 6 (lower is better)
Translates to: RYISAAPSLPSC*LIALLIENPLH
Trigger: ATGTAAAGGATTTTCAATGAGCAGTGCAATAAGCCAGCAACTGGGAAGGCTTGGAGCGGCACTGATATAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409343.5
CDS CAA 72 bp CTGGTGTTTTCCAAATGCTCTGATTTGTCAGAGTTGTaGCCTGTGATTGGAGTGATGGAGCAGCTGGGATTA +
Preference number: 6 (lower is better)
Translates to: LVFSKCSDLSEL*PVIGVMEQLGL
Trigger: TAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAGCATTTGGAAAACACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495289.1
CDS CCA 72 bp AGCCACTTTCAGAGCTTGATGGCTGACTGGAACTGCTaGCTTTTAACTTCCCTTTATCTTCTGATTTGTCAG +
Preference number: 6 (lower is better)
Translates to: SHFQSLMADWNC*LLTSLYLLICQ
Trigger: CTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336917.9
ENST00000409343.5
ENST00000409692.5
ENST00000410066.7
ENST00000457304.5
ENST00000466398.5
ENST00000475539.5
CDS GCA 72 bp ATGGATACTCCAAATGTATGGTTAATAACCGCTTTTTaGACAGGATCCATCTGGGACAGCGCCAAGACTAAA +
Preference number: 6 (lower is better)
Translates to: MDTPNVWLITAF*TGSIWDSAKTK
Trigger: TTTAGTCTTGGCGCTGTCCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495289.1
CDS GCA 72 bp ATGGATACTCCAAATGTATGGTTAATAACCGCTTTTTaGACAGGATCCATCTTGTTCTCCCCTTTATTCTGG +
Preference number: 6 (lower is better)
Translates to: MDTPNVWLITAF*TGSILFSPLFW
Trigger: CCAGAATAAAGGGGAGAACAAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS GCA 72 bp GATCTTAATTCTCGTTCCTTGTTCACACCACTGGTATaGTTTATCCTGGTGTTTTCCAAATGCTCTGATTTG +
Preference number: 6 (lower is better)
Translates to: DLNSRSLFTPLV*FILVFSKCSDL
Trigger: CAAATCAGAGCATTTGGAAAACACCAGGATAAAGCATACCAGTGGTGTGAACAAGGAACGAGAATTAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495289.1
CDS CAA 72 bp AATGGATACTCCAAATGTATGGTTAATAACCGCTTTTaGCACAGGATCCATCTTGTTCTCCCCTTTATTCTG +
Preference number: 6 (lower is better)
Translates to: NGYSKCMVNNRF*HRIHLVLPFIL
Trigger: CAGAATAAAGGGGAGAACAAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466398.5
CDS GCA 72 bp ATGGATACTCCAAATGTATGGTTAATAACCGCTTTTTaGACAGGATCCATCTGGCAAAATTTATTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: MDTPNVWLITAF*TGSIWQNLLVS
Trigger: TGAGACCAATAAATTTTGCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439340.1
CDS CAA 72 bp AATGGATACTCCAAATGTATGGTTAATAACCGCTTTTaGCACAGGATCCATCTGGCAAAATTTATTGGTCTC +
Preference number: 6 (lower is better)
Translates to: NGYSKCMVNNRF*HRIHLAKFIGL
Trigger: GAGACCAATAAATTTTGCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439340.1
CDS TCA 72 bp GTTTTTAAGGTTACAGTCCACGTTCACGTCTGCATTTaGGCACTGTACGAGATGTTACATTTAAAAGTAAAT +
Preference number: 6 (lower is better)
Translates to: VFKVTVHVHVCI*ALYEMLHLKVN
Trigger: ATTTACTTTTAAATGTAACATCTCGTACAGTGCTCAAATGCAGACGTGAACGTGGACTGTAACCTTAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336917.9
ENST00000469551.5