RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF385A (Homo sapiens)

Ensembl gene IDs: ENSG00000161642

Ensembl transcript IDs: ENST00000338010.9, ENST00000352268.10, ENST00000394313.7, ENST00000546919.5, ENST00000546970.5, ENST00000547210.5, ENST00000549937.5, ENST00000549962.5, ENST00000550120.1, ENST00000550774.5, ENST00000550779.5, ENST00000551109.5, ENST00000551771.5, ENST00000551864.1, ENST00000552382.5

Found 735 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCGGGCGCAGGGACAGCGGCGAGCCTGCTGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCTGGGGAGCAGGCCGCCCGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: SRAQGQRRACCRCHH*SHRQGAGEQAARQG
Trigger: TCCCTGGCGGGCGGCCTGCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR GCA 90 bp TGCGGCTGGAGCCGGGCGCAGGGACAGCGGCGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGCCAGGGGGCTGGGGAGCAGGCCGCC +
Preference number: 1 (lower is better)
Translates to: CGWSRAQGQRRACCR*HHCSHRQGAGEQAA
Trigger: GGCGGCCTGCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCCGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR GCA 90 bp AAGAGGTGCGGCTGGAGCCGGGCGCAGGGACAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGCCACCGCCAGGGGGCTGGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: KRCGWSRAQGQRRAC*RCHHCSHRQGAGEQ
Trigger: CTGCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR CCA 90 bp AAGCAGAGGGTGAGTGATCGGCGGTCCCTGGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAGCGGCGAGCCTGCTGCCGCTGCCAT +
Preference number: 1 (lower is better)
Translates to: KQRVSDRRSLEKRCG*SRAQGQRRACCRCH
Trigger: ATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCACTCACCCTCTGCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR TCA 90 bp AAAGTCAGCGTGCCCGCCAGCTCCCCGGCGCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTGGGCTTCCCGGCCACGCCGTCTCGG +
Preference number: 1 (lower is better)
Translates to: KVSVPASSPAPLDFL*RLSSGLGFPATPSR
Trigger: CCGAGACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTGGCGGGCACGCTGACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR GCA 90 bp AAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGG +
Preference number: 1 (lower is better)
Translates to: KVYGGISLVPPKCRR*PQVLPPAMGPARPG
Trigger: CCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR CCA 90 bp CTAGGGAGGAAGAAGGCGAGGGAAAGGTCTATGGTGGCATCTCCTTaGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTG +
Preference number: 1 (lower is better)
Translates to: LGRKKARERSMVASP*SHPSAGDAPKCCPL
Trigger: CAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGCCTTCTTCCTCCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR TCA 90 bp CGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAAT +
Preference number: 1 (lower is better)
Translates to: RPSCAVEVTGGRGQP*GLGTWIGEATDSAN
Trigger: ATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR CCA 90 bp CCTCCCCCTACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: PPPTEDGGVHGSASV*GREPESQSPLIAKK
Trigger: TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGTAGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 2 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGSRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 2 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTTGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTALVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 2 (lower is better)
Translates to: TEDGGVHGSASVWGREPERLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTCGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGATGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 2 (lower is better)
Translates to: DSANPAKGKGGGEASIAFKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGSRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: TEDGGVHGSASVWGREPERSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: DSANPAKGKGGGEASIAFPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GCCCGCCAGGGACTTGGGCAGCTCCTTGGAGAAAGTCAGCGTGCCCGCCAGCTCTCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: ARQGLGQLLGESQRARQLSPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...GAGCTGGCGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTARWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCATGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGATGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGCCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 2 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPRACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCATGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGACCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCAGTAGAGCAGCCGCTTaGCTTTCTCCTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTASRAAA*LSPPLP
Trigger: AGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR CAA 90 bp ACTAGGGAGGAAGAAGGCGAGGGAAAGGTCTATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: TREEEGEGKVYGGIS*VPPKCRRCPQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGCCTTCTTCCTCCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 2 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: DSANPAKGKGGGEASIAFGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 2 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGLGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGTGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: DSANPAKGKGGGEASIAFPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 2 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 2 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: EDGGVHGSASVWGREPESVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 2 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGATCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 2 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGSRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: VHGSASVWGREPESQSPLRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGCGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 2 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGACCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGSSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR TCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 2 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: DSANPAKGKGGGEASIAFPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR GCA 72 bp AGCCGGGCGCAGGGACAGCGGCGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGCCAGGGGGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: SRAQGQRRACCR*HHCSHRQGAGE
Trigger: CTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR GCA 72 bp GGCTGGAGCCGGGCGCAGGGACAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGCCACCGCCAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: GWSRAQGQRRAC*RCHHCSHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR TCA 72 bp GTGCCCGCCAGCTCCCCGGCGCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTGGGCTTCCCGGCCACG +
Preference number: 3 (lower is better)
Translates to: VPASSPAPLDFL*RLSSGLGFPAT
Trigger: CGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR GCA 72 bp CCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: PWSHPSAGDAPK*CPLQWARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 3 (lower is better)
Translates to: VTPPPELCSGGDWWEGTATPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR GCA 72 bp GGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCT +
Preference number: 3 (lower is better)
Translates to: GGISLVPPKCRR*PQVLPPAMGPA
Trigger: AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR TCA 72 bp GACCAGTGTAGGCCAGACCCCTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAAACCACGGAGTCGGGG +
Preference number: 3 (lower is better)
Translates to: DQCRPDPSRVGG*RVDDTETTESG
Trigger: CCCCGACTCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGAGGGGTCTGGCCTACACTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR CCA 72 bp GGGTTCAGGGTTGAGGTCAGTACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGATGGGTCCGGGGGCCG +
Preference number: 3 (lower is better)
Translates to: GFRVEVSTGRRG*VRAQFGWVRGP
Trigger: CGGCCCCCGGACCCATCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGTACTGACCTCAACCCTGAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYREAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACGGCTCAGTAGTGGGTaGGGCTTCCCGGCCACGCCG +
Preference number: 3 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRLSSG*GFPATP
Trigger: CGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 3 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR CCA 72 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTaGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTG +
Preference number: 3 (lower is better)
Translates to: VTPPPELCSGGD*WEGTAMRSRNL
Trigger: CAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 3 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR CCA 72 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATT +
Preference number: 3 (lower is better)
Translates to: TEDGGVHGSASV*GREPESQSPLI
Trigger: AATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 3 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 3 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGTCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 3 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR TCA 72 bp TGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATCGGGGAGGCTACAGAC +
Preference number: 3 (lower is better)
Translates to: CAVEVTGGRGQP*GLGTWIGEATD
Trigger: GTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGATATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGG +
Preference number: 3 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGYGGIS*VPPKCR
Trigger: CCGGCACTTGGGTGGGACCAAGGAGATGCCACCATA...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 3 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: EDGGVHGSASVWGREPESPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 3 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACCTCCGAGTTGACCTaGACATTGCAGATCTCACAG +
Preference number: 3 (lower is better)
Translates to: GSASVWGREPESQSPLIATSELT*TLQISQ
Trigger: CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR CCA 72 bp ACCTCCGAGTTGACCTTGACATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCAGGAGCCTCTGGTTCC +
Preference number: 3 (lower is better)
Translates to: TSELTLTLQISQ*KVRSWAGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATTTGTGCTTAGTACCTTaGTTATGTGCCTCAAGCTGG +
Preference number: 3 (lower is better)
Translates to: ARERSMVASPWSHPSAGDLCLVP*LCASSW
Trigger: CCAGCTTGAGGCACATAACAAAGGTACTAAGCACAA...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: ARERSMVASPWSHPSAGDASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 3 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 3 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTAGTGGGTTGGGCTTCCCGGCCACGCCGTCTCGGTGCCGCCGGCTGGAGATGTGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: VVGWASRPRRLGAAGWRCATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...ACATCTCCAGCCGGCGGCACCGAGACGGCGTGGCCGGGAAGCCCAACCCACTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR TCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTCCAGTGGGGGCTGCATaGTCGGGGGCTGCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAPVGAA*SGAAVA
Trigger: TGCTACGGCAGCCCCCGATCATGCAGCCCCCACTGG...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCAGTGGGGGCTGCATaGTCGGGGGCTGCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPVGAA*SGAAVA
Trigger: TGCTACGGCAGCCCCCGATCATGCAGCCCCCACTGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTTGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGRACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGACAGCGGCGAGCCTaGTGCCGCTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGQRRA*CRCHHC
Trigger: GCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAAKGRG*LEWEGQ
Trigger: CTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPAREKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTARAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCTGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTACCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPASRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTTGCATGATCGGGGGCTaGCGTAGCAGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGCMIGG*RSRGRG
Trigger: GCCCCTGCCTCTGCTACGGCAGCCCCCGATCATGCA...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAAKGRG*LEWEGQ
Trigger: CTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGAKGRG*LEWEGQ
Trigger: CTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTCAGTCTCCGGAATGCTaGGAGGGGATGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAQSPEC*EGMGSQ
Trigger: CTGGCTCCCCATCCCCTCCCAGCATTCCGGAGACTG...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCTTGTGACGGCTCAGTAGTGGGTTGGGCTTCCCGGCCACGCCGTCTCGGTGCCGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: SCDGSVVGWASRPRRLGAGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...GGCACCGAGACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR TCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAAGGGCAGGATCTGCTTaGGGTCCAGTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLRAGSA*GPVGAA
Trigger: TGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCT...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAAGGGCAGGATCTGCTTaGGGTCCAGTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARRAGSA*GPVGAA
Trigger: TGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPARRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTASRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLSRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGTCCCGGGTCGGCGGCTaGAGGGTTGACGATACGGAA +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGSRVGG*RVDDTE
Trigger: TTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGA...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGGAAGGGCAGGATCTaGTTGAGGTCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGKGRI*LRSSGG
Trigger: GCCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGGAAGGGCAGGATCTaGTTGAGGTCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGKGRI*LRSSGG
Trigger: GCCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGTGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPALVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCAGTCTCCGGAATGCTaGGAGGGGATGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGQSPEC*EGMGSQ
Trigger: CTGGCTCCCCATCCCCTCCCAGCATTCCGGAGACTG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACAGTCTCCGGAATGCTaGGAGGGGATGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLQSPEC*EGMGSQ
Trigger: CTGGCTCCCCATCCCCTCCCAGCATTCCGGAGACTG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCGCCCGCCAGGGACTTaGGCAGCTCCTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGRPPGT*AAPWRK
Trigger: CTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACGCCCGCCAGGGACTTaGGCAGCTCCTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLRPPGT*AAPWRK
Trigger: CTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPATGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCTTGTGACGGCTCAGTAGTGGGTTGGGCTTCCCGGCCACGCCGTCTCGGTGCCCGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 4 (lower is better)
Translates to: SCDGSVVGWASRPRRLGARLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...GGCACCGAGACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCCAGTGGGGGCTGCATaGTCGGGGGCTGCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGPVGAA*SGAAVA
Trigger: TGCTACGGCAGCCCCCGATCATGCAGCCCCCACTGG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACAGCCTCAATGCCTTTaGCTCGTCGGGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLQPQCL*LVGRGD
Trigger: ATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGTCCAGTGGGGGCTaGATGATCGGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSRSSGG*MIGGCR
Trigger: ACGGCAGCCCCCGATCATGCAGCCCCCACTGGACCT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGCCACGCCGTCTCGGTaGCGCCGGCTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLATPSR*RRLEMC
Trigger: GCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGATGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGGACAGCGGCGAGCCTaGTGCCGCTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGGQRRA*CRCHHC
Trigger: GCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTGCCGAGGATCATGCTaGGGACCCAGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLCRGSC*GPRRPG
Trigger: CCCCGGGCGCCTGGGTCCCCAGCATGATCCTCGGCA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338010.9
ENST00000352268.10
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAAGGGGCTGGCTCGAGTaGGAAGGGCAGGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLRGWLE*EGQDLL
Trigger: AAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCT...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTCTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPALGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPATWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGATGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGGCAGGATCTGCTTaGGGTCCAGTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSRAGSA*GPVGAA
Trigger: TGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCCGGCTCAGGCTGCCTaGAGGGCAGAGAAAACATTC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAPAQAA*RAEKTF
Trigger: GAATGTTTTCTCTGCCCTTCAGGCAGCCTGAGCCGG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394313.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGGCTGCCGAGGATCATaGTGGGGACCCAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRGCRGS*WGPRRP
Trigger: CGGGCGCCTGGGTCCCCAGCATGATCCTCGGCAGCC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338010.9
ENST00000352268.10
CDS-3UTR GCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCAGGTCCAGTGGGGGCTaGATGATCGGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGRSSGG*MIGGCR
Trigger: ACGGCAGCCCCCGATCATGCAGCCCCCACTGGACCT...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGGAAGGGCAGGATCTaGTTGAGGTCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGKGRI*LRSSGG
Trigger: GCCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGACCAGTCTCCGGAATaGTGGGAGGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESDQSPE*WEGMGS
Trigger: GCTCCCCATCCCCTCCCAGCATTCCGGAGACTGGTC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTCAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGGACAGCGGCGAGCCTaGTGCCGCTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGGQRRA*CRCHHC
Trigger: GCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGGACAGCGGCGAGCCTaGTGCCGCTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAGQRRA*CRCHHC
Trigger: GCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGGCTAGGGCATGGTaGGGGGCGGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGARAW*GAGTVR
Trigger: CCTCACTGTGCCCGCCCCGCACCATGCCCTAGCCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGATTAGTTTCTGATGCCTaGTGCCCCCAGGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARLVSDA*CPQAVA
Trigger: GGCCACTGCCTGGGGGCAGCAGGCATCAGAAACTAA...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGTGCCGAGGATCATGCTaGGGACCCAGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGCRGSC*GPRRPG
Trigger: CCCCGGGCGCCTGGGTCCCCAGCATGATCCTCGGCA...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338010.9
ENST00000352268.10
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGAKGRG*LEWEGQ
Trigger: CTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGPPKV*ESTAFC
Trigger: GCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGPPKV*ESTAFC
Trigger: GCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAATGCTGGGAGGGGATaGGGAGCCAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGNAGRG*GARLFL
Trigger: GAGAAACAGCCTGGCTCCCCATCCCCTCCCAGCATT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARLGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTALGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGTWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGACGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTAGTGGGTTGGGCTTCCCGGCCACGCCGTCTCGGTGCCGCCGGCTGGAGATGTAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VVGWASRPRRLGAAGWRCRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...ACATCTCCAGCCGGCGGCACCGAGACGGCGTGGCCGGGAAGCCCAACCCACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTTGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCAGTCTCCGGAATGCTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAQSPEC*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGCATTCCGGAGACTG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCAGTGGGGGCTGCATaGTCGGGGGCTGCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPVGAA*SGAAVA
Trigger: TGCTACGGCAGCCCCCGATCATGCAGCCCCCACTGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACCAGTGGGGGCTGCATaGTCGGGGGCTGCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPPVGAA*SGAAVA
Trigger: TGCTACGGCAGCCCCCGATCATGCAGCCCCCACTGG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGCCTCAATGCCTTTaGCTCGTCGGGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESQPQCL*LVGRGD
Trigger: ATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAPLDFL*RLSSGL
Trigger: CAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GCCCGCCAGGGACTTGGGCAGCTCCTTGGAGAAAGTCAGCGTGCCCGCCAGCTCAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: ARQGLGQLLGESQRARQLKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...GAGCTGGCGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR TCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTGCATGATCGGGGGCTaGCGTAGCAGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLCMIGG*RSRGRG
Trigger: GCCCCTGCCTCTGCTACGGCAGCCCCCGATCATGCA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGGTCCAGTGGGGGCTaGATGATCGGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGRSSGG*MIGGCR
Trigger: ACGGCAGCCCCCGATCATGCAGCCCCCACTGGACCT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGGAAACTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAGNWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGTTTCC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTTCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGSPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACTGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPELVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGACCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGCCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACTGCTTGAGGTCCAGTaGGGGCTGCATGATCGGGGG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGLLEVQ*GLHDRG
Trigger: CCCCCGATCATGCAGCCCCCACTGGACCTCAAGCAG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGAGGGGCTGGCTCGAGTaGGAAGGGCAGGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPERGWLE*EGQDLL
Trigger: AAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCT...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCAGGGGCTGGCTCGAGTaGGAAGGGCAGGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESRGWLE*EGQDLL
Trigger: AAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGTAGAGCAGCCGCTTaGCTTTCTCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPASRAAA*LSPPLP
Trigger: AGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPETGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGACGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACCTGGGGCTAGGGCATaGTGCGGGGCGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPPGARA*CGAGTV
Trigger: CACTGTGCCCGCCCCGCACCATGCCCTAGCCCCAGG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGTGCTGCCCCCTGCAATaGGCCCGGCTAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLCCPLQ*ARLDLG
Trigger: CCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCA...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGCGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGAGGCGGGGGTGGGCTTaGACTGGACACCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRRGWA*TGHPLP
Trigger: GGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTCGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTCCCTTGGTTACACCCTaGCCAGTCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSPLVTP*PVSGML
Trigger: CAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGG...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTCCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGGCTGCCGAGGATCATaGTGGGGACCCAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGGCRGS*WGPRRP
Trigger: CGGGCGCCTGGGTCCCCAGCATGATCCTCGGCAGCC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338010.9
ENST00000352268.10
CDS-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACAGGTCCAGTGGGGGCTaGATGATCGGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDRSSGG*MIGGCR
Trigger: ACGGCAGCCCCCGATCATGCAGCCCCCACTGGACCT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGACGCCAGGCTCCCTaGCTCTGGTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGRQAP*LWSWQP
Trigger: AGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGACCAGTCTCCGGAATaGTGGGAGGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGDQSPE*WEGMGS
Trigger: GCTCCCCATCCCCTCCCAGCATTCCGGAGACTGGTC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGACCAGTCTCCGGAATaGTGGGAGGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGDQSPE*WEGMGS
Trigger: GCTCCCCATCCCCTCCCAGCATTCCGGAGACTGGTC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATCCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGTTTCTGATGCCTGCTaGCCCCAGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAVSDAC*PQAVAW
Trigger: CCAGGCCACTGCCTGGGGGCAGCAGGCATCAGAAAC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGAKGRG*LEWEGQ
Trigger: CTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESGPPKV*ESTAFC
Trigger: GCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCAGTCCATTCTCCATaGAAACTGGACGGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARPVHSP*KLDGVL
Trigger: TAGCACCCCGTCCAGTTTCCATGGAGAATGGACTGG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGAATGCTGGGAGGGGATaGGGAGCCAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPENAGRG*GARLFL
Trigger: GAGAAACAGCCTGGCTCCCCATCCCCTCCCAGCATT...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCTGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPELGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGAGAAGAGGTGCGGCTaGAGCCGGGCGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPEKRCG*SRAQGQ
Trigger: CTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGTGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACAGGGCAGGATCTGCTTaGGGTCCAGTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDRAGSA*GPVGAA
Trigger: TGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMPLDFL*RLSSGL
Trigger: CAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGG...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTGAAGCAGAGGGTGAGTaGTCGGCGGTCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFEAEGE*SAVPGE
Trigger: TTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTC...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGAAGCAGAGGGTGAGTaGTCGGCGGTCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSEAEGE*SAVPGE
Trigger: TTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGAAGCAGAGGGTGAGTaGTCGGCGGTCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGEAEGE*SAVPGE
Trigger: TTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIARRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCTCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESSPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: VTPPPELCSGGDWWEGTASSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGATGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGATGCCGCTGCCATCACTaGAGCCACCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGCRCHH*SHRQGA
Trigger: AGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCA...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGRACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAACGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKRACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAACAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGACAGCGGCGAGCCTaGTGCCGCTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGQRRA*CRCHHC
Trigger: GCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACCCAGGATCCCGCCTaGTCCCCTCCCCCTACGGAG +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKTQDPA*SPPPTE
Trigger: CTCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGT...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGTTTCTGATGCCTGCTaGCCCCAGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDVSDAC*PQAVAW
Trigger: CCAGGCCACTGCCTGGGGGCAGCAGGCATCAGAAAC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCAGGCTGCCTTTTCTaGAGGCTGCCTGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPESGCLF*RLPAEP
Trigger: TGGTTCAGCAGGCAGCCTGCAGAAAAGGCAGCCTGA...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546970.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCTGCTTGAGGTCCAGTaGGGGCTGCATGATCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGLLEVQ*GLHDRG
Trigger: CCCCCGATCATGCAGCCCCCACTGGACCTCAAGCAG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGGPPKV*ESTAFC
Trigger: GCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGATTCTCCATGGAAACTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGILHGN*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGTTTCCATGGAGAAT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCAGTCTCCGGAATGCTaGGAGGGGATGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGQSPEC*EGMGSQ
Trigger: CTGGCTCCCCATCCCCTCCCAGCATTCCGGAGACTG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGTWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACGCCCGCCAGGGACTTaGGCAGCTCCTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPRPPGT*AAPWRK
Trigger: CTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGTGATCGGCGGTCCCTaGAGAAGAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGVIGGP*RRGAAG
Trigger: TCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCAC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAAGTGGAGGTGACTGGTaGGAGGGGACAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGSGGDW*EGTAMR
Trigger: CCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACT...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGTGGAGGTGACTGGTaGGAGGGGACAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGSGGDW*EGTAMR
Trigger: CCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTAGTGGAGGTGACTGGTaGGAGGGGACAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFSGGDW*EGTAMR
Trigger: CCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACT...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCCAGCCTCAAGCCCCTaGCCACCCTCTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSPASSP*PPSSSG
Trigger: ACCAGAAGAAGAGGGTGGCCAGGGGCTTGAGGCTGG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546970.5
3UTR CAA 72 bp GACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGACTCGGCGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: DWWEGTAMRSRN*DRGGYRLGESC
Trigger: GCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACAGCCTCAATGCCTTTaGCTCGTCGGGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRQPQCL*LVGRGD
Trigger: ATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGAAGCAGAGGGTGAGTaGTCGGCGGTCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYREAEGE*SAVPGE
Trigger: TTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGAAGCAGAGGGTGAGTaGTCGGCGGTCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLEAEGE*SAVPGE
Trigger: TTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGAGGGGTTCAGGGTTaGGGTCAGTACGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGGVQG*GQYGEK
Trigger: CTTCTCCCCGTACTGACCTCAACCCTGAACCCCTCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGACCCGACCATGGCTTGTaGACCCCGTTTTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGPDHGL*TPFCAR
Trigger: CCTAGCACAAAACGGGGTTCACAAGCCATGGTCGGG...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATCGGCGGCTGAAGGGTTaGCGATACGGAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDRRLKG*RYGNHG
Trigger: TCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCG...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGCTGCCTTTAGTTTCTaGTGCCTGCTGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGAAFSF*CLLPPG
Trigger: GCCTGGGGGCAGCAGGCATCAGAAACTAAAGGCAGC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551109.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAATGCATGATCGGGGGCTaGCGTAGCAGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKCMIGG*RSRGRG
Trigger: GCCCCTGCCTCTGCTACGGCAGCCCCCGATCATGCA...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGACCAGTCTCCGGAATaGTGGGAGGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPDQSPE*WEGMGS
Trigger: GCTCCCCATCCCCTCCCAGCATTCCGGAGACTGGTC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACAGCGGCGAGCCTGCTaGCGCTGCCATCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKQRRAC*RCHHCS
Trigger: GCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGAGATCATTTAGGGAGTaGCGGGAGGAGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLRSFRE*REEGRA
Trigger: AGCCCGCCCCTCCTCCCGGCACTCCCTAAATGATCT...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGAGATGCCCCCAAGTaGTGCCCCCTGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGDAPK*CPLQWA
Trigger: GGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGRLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACAGGGGCTGGCTCGAGTaGGAAGGGCAGGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDRGWLE*EGQDLL
Trigger: AAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCAGTCCATTCTCCATaGAAACTGGACGGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESPVHSP*KLDGVL
Trigger: TAGCACCCCGTCCAGTTTCCATGGAGAATGGACTGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCCAGTCCATTCTCCATaGAAACTGGACGGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEPVHSP*KLDGVL
Trigger: TAGCACCCCGTCCAGTTTCCATGGAGAATGGACTGG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGTAGAGCAGCCGCTTaGCTTTCTCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSSRAAA*LSPPLP
Trigger: AGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGAGTAGAGCAGCCGCTTaGCTTTCTCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMSRAAA*LSPPLP
Trigger: AGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCTGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGTGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAATGTGCTGTTTCAGTTaGACCTCCGAGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARMCCFS*TSELTL
Trigger: CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACAT...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGCTCAGTAGTGGGTTaGGCTTCCCGGCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGSVVG*ASRPRR
Trigger: ACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFTWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIATWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACGTGCGCAGTTCGGATaGGTCCGGGGGCCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKRAQFG*VRGPGE
Trigger: TTCACCCGGCCCCCGGACCCATCCGAACTGCGCACG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDTGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGTCCCGGCTGGAGGTaGGGAGTTGAATGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGPGWR*GVEWEG
Trigger: CCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: TEDGGVHGSASVWGREPEVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAAAGGCGAGGCGGGGGTaGGCTTGGACTGGACACCCC +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKKARRG*AWTGHP
Trigger: GGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTT...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAGTGGAGGTGACTGGTaGGAGGGGACAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDSGGDW*EGTAMR
Trigger: CCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGTGGAGGTGACTGGTaGGAGGGGACAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPSGGDW*EGTAMR
Trigger: CCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGGGGAGGACCGTGGGTaGGGGGCCTGGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKGEDRG*GAWVAT
Trigger: TGTAGCAACCCAGGCCCCCCACCCACGGTCCTCCCC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
3UTR CAA 72 bp GAAGAAGGCGAGGGAAAGGTCTATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: EEGEGKVYGGIS*VPPKCRRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGCCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAAGGGCAGGATCTGCTTaGGGTCCAGTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGRAGSA*GPVGAA
Trigger: TGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCCTTGGTTACACCCTaGCCAGTCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPLVTP*PVSGML
Trigger: CAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCTTGGTTACACCCTaGCCAGTCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLPLVTP*PVSGML
Trigger: CAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGG...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGCCGAGGGTAAGCTTTaGTGGGCCCGAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGAEGKL*WARAHF
Trigger: GAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLPLDFL*RLSSGL
Trigger: CAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGG...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGGGAAGGGCAGGATCTaGTTGAGGTCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGGKGRI*LRSSGG
Trigger: GCCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAGAGCACAGCCTTCTaGACAGGGTCCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGESTAF*TGSMVL
Trigger: CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGGAAACTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGGNWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGTTTCC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCTCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIASPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGATCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGSPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACCCAAGTGCCGGAGATaGCCCCAAGTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKPKCRR*PQVLPP
Trigger: AGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACCCCCGCCCGAGTTGTaGAGTGGAGGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKPPPEL*SGGDWW
Trigger: CCACCAGTCACCTCCACTGCACAACTCGGGCGGGGG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACTGCTTGAGGTCCAGTaGGGGCTGCATGATCGGGGG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGLLEVQ*GLHDRG
Trigger: CCCCCGATCATGCAGCCCCCACTGGACCTCAAGCAG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLGPPKV*ESTAFC
Trigger: GCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCATTCTCCATGGAAACTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESILHGN*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGTTTCCATGGAGAAT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGATTCTCCATGGAAACTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMILHGN*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGTTTCCATGGAGAAT...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAATGCTGGGAGGGGATaGGGAGCCAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDNAGRG*GARLFL
Trigger: GAGAAACAGCCTGGCTCCCCATCCCCTCCCAGCATT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAATGCTGGGAGGGGATaGGGAGCCAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPNAGRG*GARLFL
Trigger: GAGAAACAGCCTGGCTCCCCATCCCCTCCCAGCATT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCATGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGTGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRLGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCTCGGTGCCGCCGGCTaGAGATGTGCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLLGAAG*RCAVSV
Trigger: AACTGAAACAGCACATCTCCAGCCGGCGGCACCGAG...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACACTTGGGCAGCTCCTTaGAGAAAGTCAGCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDTWAAP*RKSACP
Trigger: CGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACGCCCGCCAGGGACTTaGGCAGCTCCTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGRPPGT*AAPWRK
Trigger: CTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACGCCTGGGTCCCGGCTaGAGGTGGGGAGTTGAATGG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKRLGPG*RWGVEW
Trigger: CCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAAGCGCTTCAGTTTaGGGTAGGGAGCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPGSASV*GREPES
Trigger: GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSRGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCGAGGGAAAGGTCTATaGTGGCATCTCCTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIARGKGL*WHLLGP
Trigger: GGGACCAAGGAGATGCCACCATAGACCTTTCCCTCG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACTTGTGCTTAGTACCTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGLVLST*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGGTACTAAGCACAAG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352268.10
CDS-3UTR TCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACAGCCTCAATGCCTTTaGCTCGTCGGGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGQPQCL*LVGRGD
Trigger: ATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLPLDFL*RLSSGL
Trigger: CAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGG...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGACCCCTAGACTTCTTGTaGCGGCTCAGTAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRPLDFL*RLSSGL
Trigger: CAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGG...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAAACCAAAGTGCTTATaGGGGACCCAGGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPKPKCL*GTQDPA
Trigger: GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGTCATCCTTTAGTTTCTaGTGCCTGCTGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGSSFSF*CLLPPG
Trigger: GCCTGGGGGCAGCAGGCATCAGAAACTAAAGGATGA...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546970.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCCGAGCCTGCTGCCGCTaGCATCACTGCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: SPLRASRIVLCLVPLLCARACCR*HHCSHR
Trigger: GCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCG...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTGTACACACTTCCCCTaGTGGCTCCAGAGCAATGGA +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLCTHFP*WLQSNG
Trigger: TCCATTGCTCTGGAGCCAGCAGGGGAAGTGTGTACA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394313.7
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAACTGCCCGGCTCAGGCTaGCTGAAGGGCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKLPGSG*LKGREN
Trigger: GTTTTCTCTGCCCTTCAGGCAGCCTGAGCCGGGCAG...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394313.7
CDS-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGCCAGTCCATTCTCCATaGAAACTGGACGGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGPVHSP*KLDGVL
Trigger: TAGCACCCCGTCCAGTTTCCATGGAGAATGGACTGG...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGTAGAGCAGCCGCTTaGCTTTCTCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGSRAAA*LSPPLP
Trigger: AGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACGCCCGCCAGGGACTTaGGCAGCTCCTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKRPPGT*AAPWRK
Trigger: CTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAACCCCTCGGTACCCCTTaGGCGATGGGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKPLGTP*AMGAGE
Trigger: TTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGG...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GAGTTGACCTTGACATTGCAGATCTCACAGTGGAAAGTTCGGTCCTGGGCAGGACGGGCCGCTTGGTCTTaGGCAAGGGTCCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: ELTLTLQISQWKVRSWAGRAAWS*ARVPQK
Trigger: CTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCG...TCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR TCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACCCTTGGTTACACCCTaGCCAGTCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGPLVTP*PVSGML
Trigger: CAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAACCCTTGGTTACACCCTaGCCAGTCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKPLVTP*PVSGML
Trigger: CAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGG...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGGCGATGGGTGCTGGTaGAAAGAATGGAACCCGGAC +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGGDGCW*KEWNPD
Trigger: GTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGGGAGGGGACAGCCATaGGGTCTAGGAACTTGGATC +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGGRGQP*GLGTWI
Trigger: GATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAATTGGTCCCACCCAAGTaGCGGAGATGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKLVPPK*RRCPQV
Trigger: CACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAA...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCAGACTCGGCGAATCCTaGGAAGGGGAAGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPLRASRIVLCLVPLLCARLGES*EGEGRG
Trigger: CCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTCT...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR GCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAATGCTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGECWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGCATTC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR CCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTTTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAACGGGGAGAAGAGGATaGGTCCGTGCGCAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKTGRRG*VRAQFG
Trigger: TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGT...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGGAAAGGTCTATGGTaGCATCTCCTTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPGKGLW*HLLGPT
Trigger: GGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGAGGAAGATTAAAGCTTaGGAACCCCACCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGRKIKA*EPHPSL
Trigger: CAGGCTTGGGTGGGGTTCCCAAGCTTTAATCTTCCT...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394313.7
CDS-3UTR CCA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGGATCCTAAAGCTTaGTATCGCCCCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGDPKA*YRPRKK
Trigger: CTTCTTCCTGGGGCGATACCAAGCTTTAGGATCCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000546970.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGATCTCCTCCTCTTCCTTaGTACCCCCAGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGSPPLP*YPQARK
Trigger: CTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGA...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDSSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDSSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRSSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EDGGVHGSASVWGREPESASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAAGTACCTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPSTWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGGTACT...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352268.10
CDS-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTTCCAGAATTGTCTTGTaGTTAGTACCTGGACGGGGT +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFSRIVL*LVPGRG
Trigger: ACCCCGTCCAGGTACTAAGCACAAGACAATTCTGGA...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000352268.10
CDS-3UTR CCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAATTCTCCATGGAAACTaGACGGGGTGCTACACCATC +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPILHGN*TGCYTI
Trigger: GATGGTGTAGCACCCCGTCCAGTTTCCATGGAGAAT...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR CCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAATGGAAAGTTCGGTCCTaGGCAGGAGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKWKVRS*AGASGS
Trigger: GGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATGTGCTGTTTCAGTTaGACCTCCGAGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLMCCFS*TSELTL
Trigger: CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACAT...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCATGTGCTGTTTCAGTTaGACCTCCGAGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAMCCFS*TSELTL
Trigger: CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACAT...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAAGGTGGGGAGTTGAATaGGAGGGGTTCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGRWGVE*EGFRVE
Trigger: CTCAACCCTGAACCCCTCCCATTCAACTCCCCACCT...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCCAGCCTCAATGCCTTTaGCTCGTCGGGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SPLRASRIVLCLVPLLCAQPQCL*LVGRGD
Trigger: ATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTG...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAGGAAACTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKGNWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGTTTCC...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAAGTTCACAGCCACCTTaGACAGAGCACAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPSSQPP*TEHSRA
Trigger: TGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACT...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATCCAGAATTGTCTTGTaGTTAGTACCTTTGTTATGT +
Preference number: 4 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLSRIVL*LVPLLC
Trigger: ACATAACAAAGGTACTAAGCACAAGACAATTCTGGA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCAAGAGGATGGGTCCGTaGGCAGTTCGGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPLRASRIVLCLVPLLCAKRMGP*AVRMGP
Trigger: CGGACCCATCCGAACTGCGCACGGACCCATCCTCTT...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR GCA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VHGSASVWGREPESQSPLGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGTACCCCTTGGGCGATaGGTGCTGGTGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGVPLGR*VLVKRM
Trigger: CATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATCCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGGAAACTGGACGGGGTaGTACACCATCCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKGNWTG*YTIPIC
Trigger: ACAAATGGGGATGGTGTAGCACCCCGTCCAGTTTCC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSASVWGREPESQSPLIAASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGATTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGLQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAATGTGCTGTTTCAGTTaGACCTCCGAGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPMCCFS*TSELTL
Trigger: CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACAT...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR TCA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACCTGGCTCTGAGAATTaGAGCGGATTTGACAGATAT +
Preference number: 4 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPPGSEN*SGFDRY
Trigger: ATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGTACCTTTGTTATGTaGCTCAAGCTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: ASVWGREPESQSPLIAKKSTFVM*LKLGQG
Trigger: TCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACT...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGCTTCTATTGCTTTTTaGTCACAGTTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARERSMVASPWSHPSAGDASIAF*SQFCGR
Trigger: CCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAATGTGCTGTTTCAGTTaGACCTCCGAGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGMCCFS*TSELTL
Trigger: CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACAT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGATCCAGAATTGTCTTGTaGTTAGTACCTTTGTTATGT +
Preference number: 4 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGSRIVL*LVPLLC
Trigger: ACATAACAAAGGTACTAAGCACAAGACAATTCTGGA...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTTCCAGAATTGTCTTGTaGTTAGTACCTTTGTTATGT +
Preference number: 4 (lower is better)
Translates to: DSANPAKGKGGGEASIAFSRIVL*LVPLLC
Trigger: ACATAACAAAGGTACTAAGCACAAGACAATTCTGGA...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGTCCAGAATTGTCTTGTaGTTAGTACCTTTGTTATGT +
Preference number: 4 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGSRIVL*LVPLLC
Trigger: ACATAACAAAGGTACTAAGCACAAGACAATTCTGGA...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACCAGAGTCCGCTTATTaGCAAGAAAATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGPESAY*QENPFL
Trigger: CAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGGGCGAGGCTTCTATTaGTTTTTGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKGRGFY*FLLTVL
Trigger: CAAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CCA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCTTGCAGATCTCACAGTaGAAAGTTCGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPLRASRIVLCLVPLLCALQISQ*KVRSWA
Trigger: TGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAA...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
3UTR CAA 72 bp CGGCTGGAGATGTGCTGTTTCAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATCTCACAGTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RLEMCCFSWTSE*TLTLQISQWKV
Trigger: AACTTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR GCA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAATCCAGAATTGTCTTGTaGTTAGTACCTTTGTTATGT +
Preference number: 4 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKSRIVL*LVPLLC
Trigger: ACATAACAAAGGTACTAAGCACAAGACAATTCTGGA...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCCGGCTCAGTAGTGGGTaGGGCTTCCCGGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: VTPPPELCSGGDWWEGTARLSSG*GFPATP
Trigger: CGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCG...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGCGGCTCAGTAGTGGGTaGGGCTTCCCGGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMRLSSG*GFPATP
Trigger: CGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCG...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTACGGGCCGCTTGGTCTaGAGCAAGGGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPATGRLV*SKGPPK
Trigger: TTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: VTPPPELCSGGDWWEGTAAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACGGCTCAGTAGTGGGTaGGGCTTCCCGGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGRLSSG*GFPATP
Trigger: CGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGACGGGCCGCTTGGTCTaGAGCAAGGGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGTGRLV*SKGPPK
Trigger: TTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGT...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAAATGACGGGCCGCTaGGTCTTGAGCAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLEMTGR*VLSKGP
Trigger: GGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: VTPPPELCSGGDWWEGTADLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...GGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTCCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGGGAGAGGTGTCACACCCCCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GGEVSHPRPSCAVEVTGGGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...CCCACCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGTGACACCTCTCCCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTTATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGYGGIS*VPPKCR
Trigger: CCGGCACTTGGGTGGGACCAAGGAGATGCCACCATA...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: VHGSASVWGREPESQSPLEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: DSANPAKGKGGGEASIAFEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGATCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 5 (lower is better)
Translates to: PKCRRCPQVLPPAMGPARSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...TCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLSLPLV*AASMPL
Trigger: CAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCGGCTCAGTAGTGGGTaGGGCTTCCCGGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDRLSSG*GFPATP
Trigger: CGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCG...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCCCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS CCA 90 bp AGCCTGGCTGGTGCTGTAGTTGCTGAAGAGGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAGGATCTGCTTGAGGTCCAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SLAGAVVAEEAKGRG*LEWEGQDLLEVQWG
Trigger: CCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACCAGCCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549962.5
ENST00000550120.1
CDS-3UTR CAA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGAAATGACGGGCCGCTaGGTCTTGAGCAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSEMTGR*VLSKGP
Trigger: GGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: EDGGVHGSASVWGREPESLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: TEDGGVHGSASVWGREPEDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: EDGGVHGSASVWGREPESGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS CCA 90 bp AGGGTCCATGGTGCTGTAGTTGCTGAAGAGGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAGGATCTGCTTGAGGTCCAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RVHGAVVAEEAKGRG*LEWEGQDLLEVQWG
Trigger: CCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACCATGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546919.5
ENST00000546970.5
ENST00000547210.5
ENST00000550774.5
ENST00000551109.5
ENST00000551771.5
CDS-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGTCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMSLPLV*AASMPL
Trigger: CAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGA...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGACGGGCCGCTTGGTCTaGAGCAAGGGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSTGRLV*SKGPPK
Trigger: TTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGT...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAACGGGCCGCTTGGTCTaGAGCAAGGGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGTGRLV*SKGPPK
Trigger: TTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGT...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTGAAATGACGGGCCGCTaGGTCTTGAGCAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VHGSASVWGREPESQSPLEMTGR*VLSKGP
Trigger: GGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGATCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGSLPLV*AASMPL
Trigger: CAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGA...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GDWWEGTAMRSRNLDRGGSLPLV*AASMPL
Trigger: CAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGA...GCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTCTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: DSANPAKGKGGGEASIAFLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGAGGCGGGGGTGGGCTaGGACTGGACACCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKEAGVG*DWTPLA
Trigger: GGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: PPKCRRCPQVLPPAMGPAGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...AGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 5 (lower is better)
Translates to: VHGSASVWGREPESQSPLSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS CCA 90 bp GAAATGACGGGCCGCTTGGTCTTGAGCAAGGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGCACAGGGTCCATCCTGCGAGACCCT +
Preference number: 5 (lower is better)
Translates to: EMTGRLVLSKGPPKV*ESTAFCTGSILRDP
Trigger: AGGGTCTCGCAGGATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552382.5
CDS-3UTR CAA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGGAAATGACGGGCCGCTaGGTCTTGAGCAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLEMTGR*VLSKGP
Trigger: GGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCTCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GSASVWGREPESQSPLIASLPLV*AASMPL
Trigger: CAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGA...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATCTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGACCGCCCGCCAGGGACTaGGGCAGCTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGPPARD*GSSLEK
Trigger: TTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACTATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDYGGIS*VPPKCR
Trigger: CCGGCACTTGGGTGGGACCAAGGAGATGCCACCATA...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGTATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLYGGIS*VPPKCR
Trigger: CCGGCACTTGGGTGGGACCAAGGAGATGCCACCATA...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: VHGSASVWGREPESQSPLFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...AAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: EDGGVHGSASVWGREPESMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCATCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 5 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATTCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS CCA 90 bp GCCCTGCCCGGCTCAGGCTGCCTGAAGGGCAGAGAAAACATTCTGTaGGGTAGGAAGATTAAAGCTTGGGAACCCCACCCAAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: ALPGSGCLKGRENIL*GRKIKAWEPHPSLP
Trigger: TGGCAGGCTTGGGTGGGGTTCCCAAGCTTTAATCTTCCTACCCCACAGAATGTTTTCTCTGCCCTTCAGGCAGCCTGAGCCGGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394313.7
ENST00000550120.1
ENST00000551771.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGAAATGACGGGCCGCTaGGTCTTGAGCAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPEMTGR*VLSKGP
Trigger: GGGACCCTTGCTCAAGACCAAGCGGCCCGTCATTTC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTATTGTGCTTAGTACCTTaGTTATGTGCCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLLCLVP*LCASSW
Trigger: CCAGCTTGAGGCACATAACAAAGGTACTAAGCACAA...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGACCTCCGAGTTGACCTaGACATTGCAGATCTCACAG +
Preference number: 5 (lower is better)
Translates to: TEDGGVHGSASVWGREPETSELT*TLQISQ
Trigger: CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGACTTGGGCAGCTCCTaGGAGAAAGTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPDLGSS*EKVSVP
Trigger: GGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGACCTGGGGCTAGGGCATGGTCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: PKCCPLQWARLDLGLGHGPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...ACCATGCCCTAGCCCCAGGTCTAGCCGGGCCCATTGCAGGGGGCAGCACTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGATTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATTTTTTGCTCACAGTTTaGCGGAAGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDFLLTV*RKARRG
Trigger: CCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAA...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCCCGGCTAGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: HPSAGDAPKCCPLQWARLGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...TAGCCGGGCCCATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAACACCCCCGCCCGAGTaGTGCAGTGGAGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKTPPPE*CSGGDW
Trigger: CCAGTCACCTCCACTGCACAACTCGGGCGGGGGTGT...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAGCAGCCTCAATGCCTTaGACTCGTCGGGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKAASMP*TRRAWR
Trigger: TCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGC...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGACTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGAAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAGGGAGGGGTTCAGGGTaGAGGTCAGTACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ASVWGREPESQSPLIAKKGRGSG*RSVRGE
Trigger: TTCTCCCCGTACTGACCTCAACCCTGAACCCCTCCC...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAATATGGTGGCATCTCCTaGGTCCCACCCAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: ASVWGREPESQSPLIAKKYGGIS*VPPKCR
Trigger: CCGGCACTTGGGTGGGACCAAGGAGATGCCACCATA...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: TEDGGVHGSASVWGREPEGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CCGCCCGAGTTGTGCAGTGGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: PPELCSGGDWWEGTAMRSGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...AGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACTCGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: GSASVWGREPESQSPLIAMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGATCGGCGGCTGAAGGGTaGACGATACGGAAACCACGG +
Preference number: 5 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGSAAEG*TIRKPR
Trigger: CCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGA...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GACTCGGCGAATCCTGCGAAGGGGAAGGGCGGGGGCGAGGCTTCTATTGCTTTTGCCTCCAGAATTGTCTaGTGCTTAGTACCTGGACGG +
Preference number: 5 (lower is better)
Translates to: DSANPAKGKGGGEASIAFASRIV*CLVPGR
Trigger: CCGTCCAGGTACTAAGCACAAGACAATTCTGGAGGC...AAAAGCAATAGAAGCCTCGCCCCCGCCCTTCCCCTTCGCAGGATTCGCCGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352268.10
CDS-3UTR CAA 90 bp ACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCTCTTCTTCTGGTTTaGCTTTCCCCCAGGGGATCC +
Preference number: 5 (lower is better)
Translates to: TEALQFGVGSRSPRVRLLPLLLV*LSPRGS
Trigger: GGATCCCCTGGGGGAAAGCAAAACCAGAAGAAGAGG...CAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546970.5
CDS-3UTR CAA 90 bp CTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAAACGGGCCGCTTGGTCTaGAGCAAGGGTCCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LQFGVGSRSPRVRLLPRKTGRLV*SKGPPK
Trigger: TTTTGGGGGACCCTTGCTCAAGACCAAGCGGCCCGT...TTTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: EDGGVHGSASVWGREPESELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...GGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: GSASVWGREPESQSPLIADVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: TEDGGVHGSASVWGREPEPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAATGAGGTCTAGGAACTaGGATCGGGGAGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRMRSRN*DRGGYR
Trigger: TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCAT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAGTTGACCTTGACATTGCAGATCTCACAGTGGAAAGTTCGGTCCTGGGCAGGACTACACCATCCCCATTaGTTGGGGTGCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: ELTLTLQISQWKVRSWAGLHHPH*LGCCLG
Trigger: CCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAG...TCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR CAA 90 bp ACGGAGGACGGGGGTGTTCACGGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: TEDGGVHGSASVWGREPEASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...CTCCGGCTCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCCAAGTGCCGGAGATGCCCCCAAGTGCTGCCCCCTGCAATGGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: SLVPPKCRRCPQVLPPAMASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...CATTGCAGGGGGCAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATACCTCCGAGTTGACCTaGACATTGCAGATCTCACAG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDTSELT*TLQISQ
Trigger: CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 5 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAAGAGTTGATGGGAAGGGGAAGACCAGTGTAGGCCAGACCCCTCCCGGGTCGTTGTGCTTAGTACCTTaGTTATGTGCCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: ERVDGKGKTSVGQTPPGSLCLVP*LCASSW
Trigger: CCAGCTTGAGGCACATAACAAAGGTACTAAGCACAA...CGACCCGGGAGGGGTCTGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAGGTGACTGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GGDWWEGTAMRSRNLDRGELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: GSASVWGREPESQSPLIAPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...GGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGGGGCGAGGCTTCTATaGCTTTTTGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGGARLL*LFAHSF
Trigger: AAAACTGTGAGCAAAAAGCAATAGAAGCCTCGCCCC...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp TGGTGGGAGGGGACAGCCATGAGGTCTAGGAACTTGGATCGGGGAGGCTACAGAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WWEGTAMRSRNLDRGGYRELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAACCTCCGAGTTGACCTaGACATTGCAGATCTCACAG +
Preference number: 5 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGTSELT*TLQISQ
Trigger: CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAAGTTGGACCTCCGAGTaGACCTTGACATTGCAGATC +
Preference number: 5 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGSWTSE*TLTLQI
Trigger: GATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACT...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGGAGATGTGCTGTTTCAGTaGGACCTCCGAGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: GHSEVAGGKTKVLMRDPGDVLFQ*DLRVDL
Trigger: AAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC...TCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GAAGCGCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCACCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: EALQFGVGSRSPRVRLLPPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...TGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGCGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGGTCTAGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGCCCAGAGTCCGCTTATaGCCAAGAAAATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: RSRNLDRGGYRLGESCEGPRVRL*PRKSIS
Trigger: AGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGG...CCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp CGGGGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RGGHSEVAGGKTKVLMRDGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...GTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ACCAAAGTGCTTATGAGGGACCCAGGATCCCGCCTGCTCCCCTCCCCCTACGGACAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: TKVLMRDPGSRLLPSPYGQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...TCCGTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGGAACTTGGATCGGGGAGGCTACAGACTCGGCGAATCCTGCGAAGGGGAAGGGCAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: RNLDRGGYRLGESCEGEGQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...CCCTTCCCCTTCGCAGGATTCGCCGAGTCTGTAGCCTCCCCGATCCAAGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAATTGTGCTTAGTACCTTaGTTATGTGCCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASVWGREPESQSPLIAKKLCLVP*LCASSW
Trigger: CCAGCTTGAGGCACATAACAAAGGTACTAAGCACAA...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGATTGTGCTTAGTACCTTaGTTATGTGCCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGLCLVP*LCASSW
Trigger: CCAGCTTGAGGCACATAACAAAGGTACTAAGCACAA...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCAGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp ATGGGTGCTGGTGAAAAGAATGGAACCCGGACTAGGGAGGAAGAAGGCGAGGGAGAGTTGACCTTGACATaGCAGATCTCACAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: MGAGEKNGTRTREEEGEGELTLT*QISQWK
Trigger: TTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTC...TCCCTCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCGAGGGAAAGGTCTATGGTGGCATCTCCTTGGTCCCACCCAAGTGCCGGAGATCAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: ARERSMVASPWSHPSAGDQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAAGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: ASVWGREPESQSPLIAKKASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000394313.7
ENST00000546970.5
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCACCTCCGAGTTGACCTaGACATTGCAGATCTCACAG +
Preference number: 5 (lower is better)
Translates to: SPLRASRIVLCLVPLLCATSELT*TLQISQ
Trigger: CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGT...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS-3UTR CAA 90 bp GGCGGGCACAGTGAGGTTGCAGGCGGTAAAACCAAAGTGCTTATGAGGGACCCACAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: GGHSEVAGGKTKVLMRDPQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...TGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp GCTTCAGTTTGGGGTAGGGAGCCGGAGTCCCAGAGTCCGCTTATTGCCAAGAAACAAATTCAGACTTTATaGTCAGGGAGAGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: ASVWGREPESQSPLIAKKQIQTL*SGRGKR
Trigger: CCTTTTTCCTCTCCCTGACAATAAAGTCTGAATTTG...TTTCTTGGCAATAAGCGGACTCTGGGACTCCGGCTCCCTACCCCAAACTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000550779.5
ENST00000551109.5
CDS-3UTR CAA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCGGCTTCTATTGCTTTTaGCTCACAGTTTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: SPLRASRIVLCLVPLLCAGFYCF*LTVLRK
Trigger: CTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS CCA 90 bp CAGCCTTCTGCACAGGGTCCATCTAAGATCACACAGCCAGTACTTTaGAACATCAGTTTAAATCCTGCCAATCAGATGCAGGATGCAGTT +
Preference number: 5 (lower is better)
Translates to: QPSAQGPSKITQPVL*NISLNPANQMQDAV
Trigger: AACTGCATCCTGCATCTGATTGGCAGGATTTAAACTGATGTTCCAAAGTACTGGCTGTGTGATCTTAGATGGACCCTGTGCAGAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551864.1
CDS-3UTR CAA 90 bp AGCCCACTTCGGGCCTCCAGAATTGTCTTGTGCTTAGTACCTTTGTTATGTGCCGCCTCCAGAATTGTCTaGTGCTTAGTACCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: SPLRASRIVLCLVPLLCAASRIV*CLVPLL
Trigger: TAACAAAGGTACTAAGCACAAGACAATTCTGGAGGC...GGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550779.5
CDS CAA 90 bp GCTGGGTCTCCAGGTTCTCGGACGCCAGGCTCCCTGCCTCTGGTCTaGGCAGCCTCAATGCCTTTGACTCGTCGGGCGTGGCGATTACCT +
Preference number: 6 (lower is better)
Translates to: AGSPGSRTPGSLPLV*AASMPLTRRAWRLP
Trigger: AGGTAATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGTCCGAGAACCTGGAGACCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546919.5
ENST00000546970.5
ENST00000547210.5
ENST00000549937.5
ENST00000549962.5
ENST00000550120.1
ENST00000550774.5
ENST00000550779.5
ENST00000551109.5
ENST00000551771.5
ENST00000551864.1
ENST00000552382.5
CDS CCA 72 bp GGTGCTGTAGTTGCTGAAGAGGCCAAGGGTAGGGGCTaGCTCGAGTGGGAAGGGCAGGATCTGCTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: GAVVAEEAKGRG*LEWEGQDLLEV
Trigger: GACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546919.5
ENST00000546970.5
ENST00000547210.5
ENST00000549962.5
ENST00000550120.1
ENST00000550774.5
ENST00000551109.5
ENST00000551771.5
CDS CCA 72 bp GGCCGCTTGGTCTTGAGCAAGGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGCACAGGGTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: GRLVLSKGPPKV*ESTAFCTGSMV
Trigger: CACCATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338010.9
ENST00000352268.10
ENST00000394313.7
ENST00000546919.5
ENST00000546970.5
ENST00000547210.5
ENST00000549937.5
ENST00000550774.5
ENST00000550779.5
ENST00000551109.5
ENST00000551771.5
CDS CCA 72 bp GGCCGCTTGGTCTTGAGCAAGGGTCCCCCAAAAGTGTaGGAGAGCACAGCCTTCTGCACAGGGTCCATCCTG +
Preference number: 6 (lower is better)
Translates to: GRLVLSKGPPKV*ESTAFCTGSIL
Trigger: CAGGATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552382.5
CDS GCA 72 bp CACACAGCCAGTACTTTGGAACATCAGTTTAAATCCTaGCAATCAGATGCAGGATGCAGTTCAACACCCTGC +
Preference number: 6 (lower is better)
Translates to: HTASTLEHQFKS*QSDAGCSSTPC
Trigger: GCAGGGTGTTGAACTGCATCCTGCATCTGATTGGCAGGATTTAAACTGATGTTCCAAAGTACTGGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551864.1