RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF384 (Homo sapiens)

Ensembl gene IDs: ENSG00000126746

Ensembl transcript IDs: ENST00000319770.7, ENST00000355772.8, ENST00000361959.7, ENST00000396801.7, ENST00000417772.7, ENST00000436774.6, ENST00000535485.5, ENST00000537248.5, ENST00000537383.1, ENST00000538829.5, ENST00000540915.5, ENST00000542351.5, ENST00000542519.1, ENST00000542605.1, ENST00000544482.1, ENST00000545946.1, ENST00000683879.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTGTGAAGGAAAGCCGTaGCAGAGGCCCAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQCEGKP*QRPKEM
Trigger: CATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTGTGAAGGAAAGCCGTaGCAGAGGCCCAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRCEGKP*QRPKEM
Trigger: CATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETLGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 2 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGGGGAGGCTGCTGGATaGCACCATCAGCTCAGTATT +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRGEAAG*HHQLSI
Trigger: AATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGAGCAAATCCTTCCCTTaGGCACCGACCCCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSKSFP*APTPSF
Trigger: AAAACTGGGGGTCGGTGCTCAAGGGAAGGATTTGCT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR GCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 2 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLLGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 2 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGGGGAGGCTGCTGGATaGCACCATCAGCTCAGTATT +
Preference number: 2 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLGEAAG*HHQLSI
Trigger: AATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 2 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGLGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGGTAAGTGGCCACACTaGACAAGGTTCTATGAGGTC +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETGKWPH*TRFYEV
Trigger: GACCTCATAGAACCTTGTCCAGTGTGGCCACTTACC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETEAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLEAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGCAAATCCTTCCCTTaGGCACCGACCCCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLSKSFP*APTPSF
Trigger: AAAACTGGGGGTCGGTGCTCAAGGGAAGGATTTGCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCCACATCTCAGCCCTTaGCCCCTTCAAATAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLPHLSP*PLQIKG
Trigger: TCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 2 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 2 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGGTAAGTGGCCACACTaGACAAGGTTCTATGAGGTC +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRGKWPH*TRFYEV
Trigger: GACCTCATAGAACCTTGTCCAGTGTGGCCACTTACC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 2 (lower is better)
Translates to: APTPNLLLPAVNRKQSETFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCTGGACAAGGTTCTATaGGGTCATAGCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRLDKVL*GHSKSF
Trigger: GAAGGATTTGCTATGACCTCATAGAACCTTGTCCAG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGAACAAGAGGCTGGTTaGATTTGGGGCTCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGEQEAG*IWGSLF
Trigger: GAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 2 (lower is better)
Translates to: EKERGFKEIRKTITHTSKKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCTGGACAAGGTTCTATaGGGTCATAGCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGLDKVL*GHSKSF
Trigger: GAAGGATTTGCTATGACCTCATAGAACCTTGTCCAG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCTTTTCTCTGTTATCTaGGAGGGCCAGCCTCTAGTC +
Preference number: 2 (lower is better)
Translates to: EKERGFKEIRKTITHTSKLFSVI*EGQPLV
Trigger: GACTAGAGGCTGGCCCTCCCAGATAACAGAGAAAAG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: EKERGFKEIRKTITHTSKEAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCTGGACAAGGTTCTATaGGGTCATAGCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: EKERGFKEIRKTITHTSKLDKVL*GHSKSF
Trigger: GAAGGATTTGCTATGACCTCATAGAACCTTGTCCAG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: EKERGFKEIRKTITHTSKSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCCACCTGTGACCAACTaGGGAATTTCTGGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLPPVTN*GISGPL
Trigger: CAAGGGGCCAGAAATTCCCAAGTTGGTCACAGGTGG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCCAGTTTTAGAAGCTTaGCTTGGGAGGGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRPVLEA*LGRGGC
Trigger: GCAGCCTCCCCTCCCAAGCAAAGCTTCTAAAACTGG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCCAGTTTTAGAAGCTTaGCTTGGGAGGGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLPVLEA*LGRGGC
Trigger: GCAGCCTCCCCTCCCAAGCAAAGCTTCTAAAACTGG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR CCA 72 bp TTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTTATCTGGGAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LQARIEQEAGCI*GSLFSVIWEGQ
Trigger: CTGGCCCTCCCAGATAACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCCACCTGTGACCAACTaGGGAATTTCTGGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: EKERGFKEIRKTITHTSKPPVTN*GISGPL
Trigger: CAAGGGGCCAGAAATTCCCAAGTTGGTCACAGGTGG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCACATCAGCCCAAACTTaGAGGATAAGGAGGGTAAGG +
Preference number: 3 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGTSAQT*RIRRVR
Trigger: CCTTACCCTCCTTATCCTCAAAGTTTGGGCTGATGT...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAGAACAAGAGGCTGGTaGCATTTGGGGCTCCCTTTT +
Preference number: 3 (lower is better)
Translates to: EKERGFKEIRKTITHTSKRTRGW*HLGLPF
Trigger: AAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGACCACATCTCAGCCCTaGCCCCCTTCAAATAAAAGG +
Preference number: 3 (lower is better)
Translates to: EKERGFKEIRKTITHTSKTTSQP*PPSNKR
Trigger: CCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGGT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGACATCAGCCCAAACTTaGAGGATAAGGAGGGTAAGG +
Preference number: 3 (lower is better)
Translates to: EKERGFKEIRKTITHTSKTSAQT*RIRRVR
Trigger: CCTTACCCTCCTTATCCTCAAAGTTTGGGCTGATGT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
3UTR-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCAGGGACTGAGGCATTaGAGAAACCTCTGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: EKERGFKEIRKTITHTSKQGLRH*RNLCSF
Trigger: AAAAGAACAGAGGTTTCTCAAATGCCTCAGTCCCTG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACTTCCGGCCCCGGGGTaGCTTAGGAGCCACACTGCC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLPAPG*LRSHTA
Trigger: GGCAGTGTGGCTCCTAAGCCACCCCGGGGCCGGAAG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGGCCACTGCTGCCGCTaGTGCTGCTGCCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRGHCCR*CCCLHL
Trigger: CAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCTTCCGGCCCCGGGGTaGCTTAGGAGCCACACTGCC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRLPAPG*LRSHTA
Trigger: GGCAGTGTGGCTCCTAAGCCACCCCGGGGCCGGAAG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTGCTGCTGTGATGCCTaGGAGGCCTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRCCCDA*EAWAWA
Trigger: GGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGGCTTGGCCCCCGAGTaGATACGGAGGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQGLAPE*IRRCWA
Trigger: GGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGGCCACTGCTGCCGCTaGTGCTGCTGCCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLGHCCR*CCCLHL
Trigger: CAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGTGGAGGGTTGGGATTaGTGTCCCCACCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQVEGWD*CPHHPH
Trigger: GTGGGGGTGGTGGGGACAGCAATCCCAACCCTCCAC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCTTCCGGCCCCGGGGTaGCTTAGGAGCCACACTGCC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLPAPG*LRSHTA
Trigger: GGCAGTGTGGCTCCTAAGCCACCCCGGGGCCGGAAG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTGCTGCTGTGATGCCTaGGAGGCCTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETCCCDA*EAWAWA
Trigger: GGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGGCTTGGCCCCCGAGTaGATACGGAGGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWGLAPE*IRRCWA
Trigger: GGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCCTTTCCAGGGCTCCTaGACTTTCGGGCGGCGACGG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLPFQGS*TFGRRR
Trigger: CCGTCGCCGCCCGAAAGTTCAGGAGCCCTGGAAAGG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCCC +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARISLRGT*LPNPDP
Trigger: GGGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCT...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTCCGTGTCCGGCATCTaGCTGTGGCACCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSVSGI*LWHLGS
Trigger: GCTCCCTAGGTGCCACAGTCAGATGCCGGACACGGA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTGGTGCTGCAGCTCGTaGTCCCGCGAACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQWCCSS*SREPQF
Trigger: GAACTGGGGTTCGCGGGAGCACGAGCTGCAGCACCA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCTCACCCGGAAGTGGTaGTGCAGCTCGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLTRKW*CSSCSR
Trigger: GCGGGAGCACGAGCTGCAGCACCACTTCCGGGTGAG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTGCTGCCGCTGCTGCTaGTGCCTGCACCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQCCRCC*CLHLLL
Trigger: CAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGGTGGTGGCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQGGGCC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGGTGGTGGCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRGGGCC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGGGGCGGCGTTTGCTaGGAAAGGAGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWRGGVC*ERREPR
Trigger: CCTCGGCTCCCTCCTTTCCCAGCAAACGCCGCCCCT...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGCACTGTCAGCAAGGTaGGGTAGTGAGGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQALSAR*GSEVGP
Trigger: TGGCCCCACCTCACTACCCCACCTTGCTGACAGTGC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCTTCCGGCCCCGGGGTaGCTTAGGAGCCACACTGCC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRLPAPG*LRSHTA
Trigger: GGCAGTGTGGCTCCTAAGCCACCCCGGGGCCGGAAG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTGCTGCTGTGATGCCTaGGAGGCCTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRCCCDA*EAWAWA
Trigger: GGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGCTGCCCCAGGAGACTaGAAGTGTGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQAAPGD*KCGGGC
Trigger: ACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCCTCCCACAGCTCCTTaGGGGTGGGTTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSPPTAP*GWVGET
Trigger: AGTCTCCCCAACCCACCCCCAAGGAGCTGTGGGAGG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCCTTTCCAGGGCTCCTaGACTTTCGGGCGGCGACGG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRPFQGS*TFGRRR
Trigger: CCGTCGCCGCCCGAAAGTTCAGGAGCCCTGGAAAGG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR TCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACATCTCGGGCAGCCCTaGTTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQHLGQP*FQHPLL
Trigger: AAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCCGTGTCCGGCATCTaGCTGTGGCACCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSVSGI*LWHLGS
Trigger: GCTCCCTAGGTGCCACAGTCAGATGCCGGACACGGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTCCGTGTCCGGCATCTaGCTGTGGCACCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSVSGI*LWHLGS
Trigger: GCTCCCTAGGTGCCACAGTCAGATGCCGGACACGGA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTGGTGCTGCAGCTCGTaGTCCCGCGAACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETWCCSS*SREPQF
Trigger: GAACTGGGGTTCGCGGGAGCACGAGCTGCAGCACCA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGACCCGGAAGTGGTGCTaGAGCTCGTGCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETTRKWC*SSCSRE
Trigger: TTCGCGGGAGCACGAGCTGCAGCACCACTTCCGGGT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGAGGTCAGGGACAACCTaGAGGGCTTGTGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQRSGTT*RACEPG
Trigger: CCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACCT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTGCTGCCGCTGCTGCTaGTGCCTGCACCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETCCRCC*CLHLLL
Trigger: CAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTGCTGCCGCTGCTGCTaGTGCCTGCACCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLCCRCC*CLHLLL
Trigger: CAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGGCCACTGCTGCCGCTaGTGCTGCTGCCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLGHCCR*CCCLHL
Trigger: CAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGGCCACTGCTGCCGCTaGTGCTGCTGCCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLGHCCR*CCCLHL
Trigger: CAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTGTGGTGGTGGCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQCGGGC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTGTGGTGGTGGCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRCGGGC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGTGGAGGGTTGGGATTaGTGTCCCCACCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETVEGWD*CPHHPH
Trigger: GTGGGGGTGGTGGGGACAGCAATCCCAACCCTCCAC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGACTTTCCGGAAGTGGTaGTGCAGCTCGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQTFRKW*CSSCSR
Trigger: GCGGGAGCACGAGCTGCAGCACCACTTCCGGAAAGT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCACTTTCCGGAAGTGGTaGTGCAGCTCGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSTFRKW*CSSCSR
Trigger: GCGGGAGCACGAGCTGCAGCACCACTTCCGGAAAGT...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGCGGGCACGCACTTCTaGAGCGAGACAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETAGTHF*SETDPH
Trigger: GTGTGGGTCTGTCTCGCTCCAGAAGTGCGTGCCCGC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGCACTGTCAGCAAGGTaGGGTAGTGAGGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSALSAR*GSEVGP
Trigger: TGGCCCCACCTCACTACCCCACCTTGCTGACAGTGC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGCACTGTCAGCAAGGTaGGGTAGTGAGGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQALSAR*GSEVGP
Trigger: TGGCCCCACCTCACTACCCCACCTTGCTGACAGTGC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSWVTDA*LCGVSW
Trigger: CCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTGCTGCTGTGATGCCTaGGAGGCCTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLCCCDA*EAWAWA
Trigger: GGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGCTGCCCCAGGAGACTaGAAGTGTGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQAAPGD*KCGGGC
Trigger: ACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGCTGCCCCAGGAGACTaGAAGTGTGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSAAPGD*KCGGGC
Trigger: ACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACGGATCTCTAAGAGCTaGCCAGGTGCTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRISKS*PGAPPG
Trigger: TCCAGGTGGAGCACCTGGCCAGCTCTTAGAGATCCG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCCTCCCACAGCTCCTTaGGGGTGGGTTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLPPTAP*GWVGET
Trigger: AGTCTCCCCAACCCACCCCCAAGGAGCTGTGGGAGG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCCCGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCGGG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCCC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRSLRGT*LPNPDP
Trigger: GGGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCCATCTCGGGCAGCCCTaGTTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIHLGQP*FQHPLL
Trigger: AAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATG...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCCTTTCCAGGGCTCCTaGACTTTCCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRPFQGS*TFRKWC
Trigger: GCACCACTTCCGGAAAGTTCAGGAGCCCTGGAAAGG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCTCAGAGAAGAGCTCTaGGGAGAGAAGGCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWLREEL*GEKAGA
Trigger: CGCTCCCGCCTTCTCTCCGCAGAGCTCTTCTCTGAG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGAGGTCAGGGACAACCTaGAGGGCTTGTGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETRSGTT*RACEPG
Trigger: CCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACCT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTGTGGTGGTGGCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETCGGGC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCCTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARILGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTTCCGGAAGTGGTGCTaGAGCTCGTGCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLFRKWC*SSCSRE
Trigger: TTCGCGGGAGCACGAGCTGCAGCACCACTTCCGGAA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTAGGGGCGGCGTTTGCTaGGAAAGGAGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLRGGVC*ERREPR
Trigger: CCTCGGCTCCCTCCTTTCCCAGCAAACGCCGCCCCT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLCGVS*SDLDSV
Trigger: CACAGAGTCCAAGTCAGACCAGCTGACCCCACACAG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLWVTDA*LCGVSW
Trigger: CCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGACTGGAAGTGTGGTaGTGGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRLEVW*WLLLLL
Trigger: CAGCAGCAGCAACAGCCACCACCACACTTCCAGTCT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCACAGCTCCTTGGGGGTaGGTTGGGGAGACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARITAPWG*VGETES
Trigger: ACTCTCAGTCTCCCCAACCCACCCCCAAGGAGCTGT...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGTTCTCGATCTGACCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQVLDLT*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGTCAGATCGAGAAC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCACTCTGTGTCCATACTaGTGCCTGAGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARITLCPY*CLRAGT
Trigger: TGTCCCTGCCCTCAGGCATCAGTATGGACACAGAGT...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCCCGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCGGG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGAAATGGGGAAGGTCTaGGCTGATGATGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQEMGKV*ADDAVV
Trigger: GACCACAGCATCATCAGCTCAGACCTTCCCCATTTC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGGAGTAGAATGTCAGTaGGCACATCCGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQGVECQ*AHPAPV
Trigger: TACAGGTGCCGGATGTGCTCACTGACATTCTACTCC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGTAGGGCTTAGCCCCTaGGTGTATACGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIVGLSP*VYTDVL
Trigger: CAGCACATCCGTATACACTCAGGGGCTAAGCCCTAC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGTAGGGCTTAGCCCCTaGGTGTATACGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSVGLSP*VYTDVL
Trigger: CAGCACATCCGTATACACTCAGGGGCTAAGCCCTAC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCTCCGTGTACGCCCGATaGCAGTTGTGGCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARISVYAR*QLWHLK
Trigger: CTTCAAGTGCCACAACTGTCATCGGGCGTACACGGA...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTGTGAAGGAAAGCCGTaGCAGAGGCCCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSCEGKP*QRPKEM
Trigger: CATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGGGGAGGCTGCTGGATaGCACCATCAGCTCAGTATT +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSGEAAG*HHQLSI
Trigger: AATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTCCGTGTCCGGCATCTaGCTGTGGCACCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLSVSGI*LWHLGS
Trigger: GCTCCCTAGGTGCCACAGTCAGATGCCGGACACGGA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTGGTGCTGCAGCTCGTaGTCCCGCGAACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLWCCSS*SREPQF
Trigger: GAACTGGGGTTCGCGGGAGCACGAGCTGCAGCACCA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTTGCTGCCCTCCCCTTaGACTCACCCGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRLLPSP*THPEVV
Trigger: CACCACTTCCGGGTGAGTGCAAGGGGAGGGCAGCAA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGTGTGCGTAGACAGGTaGACCTCTAGTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRVCVDR*TSSEAA
Trigger: TGCAGCCTCACTAGAGGTGCACCTGTCTACGCACAC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTGCTGCCGCTGCTGCTaGTGCCTGCACCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLCCRCC*CLHLLL
Trigger: CAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSLCGVS*SDLDSV
Trigger: CACAGAGTCCAAGTCAGACCAGCTGACCCCACACAG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGCTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQLCGVS*SDLDSV
Trigger: CACAGAGTCCAAGTCAGACCAGCTGACCCCACACAG...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCCTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARILCGVS*SDLDSV
Trigger: CACAGAGTCCAAGTCAGACCAGCTGACCCCACACAG...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRWVTDA*LCGVSW
Trigger: CCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCAATGTGGGCACTTGTaGGGCTTGGTCTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRQCGHL*GLVSVC
Trigger: ACACACCGAGACCAAGCCCCACAAGTGCCCACATTG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCAGACTGGAAGTGTGGTaGTGGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIRLEVW*WLLLLL
Trigger: CAGCAGCAGCAACAGCCACCACCACACTTCCAGTCT...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGGTCAAAGGAACACTaGGGTGGAGGGTTGGGATTG +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRSKEH*GGGLGL
Trigger: CAATCCCAACCCTCCACCCCAGTGTTCCTTTGACCT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCGGATCTCTAAGAGCTaGCCAGGTGCTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETRISKS*PGAPPG
Trigger: TCCAGGTGGAGCACCTGGCCAGCTCTTAGAGATCCG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTCTTCCTCTTCCCAGTaGGTGGCAGCACGGATCTCT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRSSSSQ*VAARIS
Trigger: AGAGATCCGTGCTGCCACCCACTGGGAAGAGGAAGA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGAATTTCTGGCCCCTTaGGGACCACATCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRREFLAP*GPHLSP
Trigger: AGGGCTGAGATGTGGTCCCCAAGGGGCCAGAAATTC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGAATTTCTGGCCCCTTaGGGACCACATCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSEFLAP*GPHLSP
Trigger: AGGGCTGAGATGTGGTCCCCAAGGGGCCAGAAATTC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAATTTCTGGCCCCTTaGGGACCACATCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQEFLAP*GPHLSP
Trigger: AGGGCTGAGATGTGGTCCCCAAGGGGCCAGAAATTC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGTTCTCGATCTGACCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSVLDLT*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGTCAGATCGAGAAC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTCTCTTCTCCACCTCTaGGAACAGGAGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSLLHL*EQETPA
Trigger: TGCTGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCAAACCCGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGAAATGGGGAAGGTCTaGGCTGATGATGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRREMGKV*ADDAVV
Trigger: GACCACAGCATCATCAGCTCAGACCTTCCCCATTTC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCCGTGTACGCCCGATaGCAGTTGTGGCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSVYAR*QLWHLK
Trigger: CTTCAAGTGCCACAACTGTCATCGGGCGTACACGGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGGCAGATGTCCTTATaGTGCTCCGCCGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRQMSL*CSAVLY
Trigger: GTATAAGACGGCGGAGCATCATAAGGACATCTGCCT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGAGCAAATCCTTCCCTTaGGCACCGACCCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRSKSFP*APTPSF
Trigger: AAAACTGGGGGTCGGTGCTCAAGGGAAGGATTTGCT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCCTTTCCAGGGCTCCTaGACTTTCCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRPFQGS*TFRKWC
Trigger: GCACCACTTCCGGAAAGTTCAGGAGCCCTGGAAAGG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGGTCAGGGACAACCTaGAGGGCTTGTGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRSGTT*RACEPG
Trigger: CCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGTGTGCGTAGACAGGTaGACCTCTAGTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETVCVDR*TSSEAA
Trigger: TGCAGCCTCACTAGAGGTGCACCTGTCTACGCACAC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGCATGCTTCACTGTGTaGGTAGACAGGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIACFTV*VDRCTS
Trigger: AGAGGTGCACCTGTCTACGCACACAGTGAAGCATGC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGTGGTGGCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGGGCC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTGTGGTGGTGGCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLCGGGC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCTTGGGAGGGGAGGCTaGTGGATGACACCATCAGCT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRLGRGG*WMTPSA
Trigger: AGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCAAG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGAACAAGAGGCTGGTTaGATTTGGGGCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQEQEAG*IWGSLF
Trigger: GAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAGCTAAGTCCAGTCCTTaGGTTTGCCTTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQAKSSP*VCLELS
Trigger: GGAGAGTTCAAGGCAAACGCAAGGACTGGACTTAGC...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCCGGAAGTGGTGCTaGAGCTCGTGCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLFRKWC*SSCSRE
Trigger: TTCGCGGGAGCACGAGCTGCAGCACCACTTCCGGAA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355772.8
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCTTGATGGTCTCCGTGTaGATCTTGGAGTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARILMVSV*ILEWIR
Trigger: CCGGATCCACTCCAAGATGCACACGGAGACCATCAA...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTTGATGGTCTCCGTGTaGATCTTGGAGTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRLMVSV*ILEWIR
Trigger: CCGGATCCACTCCAAGATGCACACGGAGACCATCAA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGCACTGTCAGCAAGGTaGGGTAGTGAGGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLALSAR*GSEVGP
Trigger: TGGCCCCACCTCACTACCCCACCTTGCTGACAGTGC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGACCACCGTGATATTCTaGGTAACGGACGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQTTVIF*VTDAWL
Trigger: CAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGAGCTGATGATGCTGTaGTCACAAGAGAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSELMML*SQESLR
Trigger: CCTCAGGCTCTCTTGTGACCACAGCATCATCAGCTC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGCTGAGACAATCATaGGAGCCGAAATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQELRQS*EPKWGR
Trigger: CCTTCCCCATTTCGGCTCCCATGATTGTCTCAGCTC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGAGCTGAGACAATCATaGGAGCCGAAATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSELRQS*EPKWGR
Trigger: CCTTCCCCATTTCGGCTCCCATGATTGTCTCAGCTC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCAATGTGGGCACTTGTaGGGCTTGGTCTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWQCGHL*GLVSVC
Trigger: ACACACCGAGACCAAGCCCCACAAGTGCCCACATTG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCAATGTGGGCACTTGTaGGGCTTGGTCTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLQCGHL*GLVSVC
Trigger: ACACACCGAGACCAAGCCCCACAAGTGCCCACATTG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTGCAGGTGTACACCTTaGCATGCTTCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRCRCTP*HASLCA
Trigger: CGCACACAGTGAAGCATGCCAAGGTGTACACCTGCA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGACTGGAAGTGTGGTaGTGGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLRLEVW*WLLLLL
Trigger: CAGCAGCAGCAACAGCCACCACCACACTTCCAGTCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGGAGACTGGAAGTGTaGTGGTGGCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLRRLEV*WWLLLL
Trigger: CAGCAGCAACAGCCACCACCACACTTCCAGTCTCCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGCTGCCCCAGGAGACTaGAAGTGTGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLAAPGD*KCGGGC
Trigger: ACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCCTCTTCCCAGTGGGTaGCAGCACGGATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWPLPSG*QHGSLR
Trigger: TCTTAGAGATCCGTGCTGCCACCCACTGGGAAGAGG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTCTTCCTCTTCCCAGTaGGTGGCAGCACGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSSSSQ*VAARIS
Trigger: AGAGATCCGTGCTGCCACCCACTGGGAAGAGGAAGA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCTTCCTCTTCCCAGTaGGTGGCAGCACGGATCTCT +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSSSSQ*VAARIS
Trigger: AGAGATCCGTGCTGCCACCCACTGGGAAGAGGAAGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACTTTTCTCTGTTATCTaGGAGGGCCAGCCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLFSVI*EGQPLV
Trigger: GACTAGAGGCTGGCCCTCCCAGATAACAGAGAAAAG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGACAGCTCCTTGGGGGTaGGTTGGGGAGACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRTAPWG*VGETES
Trigger: ACTCTCAGTCTCCCCAACCCACCCCCAAGGAGCTGT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCTCCGTGTGCATCTTaGAGTGGATCCGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSPCAS*SGSGCA
Trigger: AGCACACCCGGATCCACTCCAAGATGCACACGGAGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGGTCTATCACCAGTGTaGATTCGTGTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRGLSPV*IRVCCW
Trigger: CCAGCAGCACACACGAATCCACACTGGTGATAGACC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGACTCTGTGTCCATACTaGTGCCTGAGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRTLCPY*CLRAGT
Trigger: TGTCCCTGCCCTCAGGCATCAGTATGGACACAGAGT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGTCTCTTCTCCACCTCTaGGAACAGGAGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWSLLHL*EQETPA
Trigger: TGCTGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGA...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCTCTTCTCCACCTCTaGGAACAGGAGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSLLHL*EQETPA
Trigger: TGCTGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCCCGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCGGG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGAAATGGGGAAGGTCTaGGCTGATGATGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLEMGKV*ADDAVV
Trigger: GACCACAGCATCATCAGCTCAGACCTTCCCCATTTC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGTAGGGCTTAGCCCCTaGGTGTATACGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRVGLSP*VYTDVL
Trigger: CAGCACATCCGTATACACTCAGGGGCTAAGCCCTAC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCAGGCAGATGTCCTTATaGTGCTCCGCCGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSRQMSL*CSAVLY
Trigger: GTATAAGACGGCGGAGCATCATAAGGACATCTGCCT...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGCAAATCCTTCCCTTaGGCACCGACCCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSKSFP*APTPSF
Trigger: AAAACTGGGGGTCGGTGCTCAAGGGAAGGATTTGCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGTGGGTTGGGGAGACTaGGAGTATAGGGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRVGWGD*EYRVFV
Trigger: TACAAAGACCCTATACTCTCAGTCTCCCCAACCCAC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTCCTTGCGTTTGCCTTaGACTCTCCCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETSLRLP*TLPSPQ
Trigger: TTGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGTCCTTGCGTTTGCCTTaGACTCTCCCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWSLRLP*TLPSPQ
Trigger: TTGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGA...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTCCTTGCGTTTGCCTTaGACTCTCCCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSLRLP*TLPSPQ
Trigger: TTGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCTCAGAGAAGAGCTCTaGGGAGAGAAGGCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGLREEL*GEKAGA
Trigger: CGCTCCCGCCTTCTCTCCGCAGAGCTCTTCTCTGAG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGGCACCTGTAGGTCTTaGCGTCTTTCTGATGGTCAT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIGTCRS*RLSDGH
Trigger: ATGACCATCAGAAAGACGGCAAGACCTACAGGTGCC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGGCACCTGTAGGTCTTaGCGTCTTTCTGATGGTCAT +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSGTCRS*RLSDGH
Trigger: ATGACCATCAGAAAGACGGCAAGACCTACAGGTGCC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGCATGCTTCACTGTGTaGGTAGACAGGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWACFTV*VDRCTS
Trigger: AGAGGTGCACCTGTCTACGCACACAGTGAAGCATGC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGAACAAGAGGCTGGTTaGATTTGGGGCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRREQEAG*IWGSLF
Trigger: GAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAACAAGAGGCTGGTTaGATTTGGGGCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQEQEAG*IWGSLF
Trigger: GAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGAACAAGAGGCTGGTTaGATTTGGGGCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIEQEAG*IWGSLF
Trigger: GAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTCCAGTCCTTGCGTTTaGCTTGAACTCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSSPCV*LELSLL
Trigger: GAGAAGGGAGAGTTCAAGGCAAACGCAAGGACTGGA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTCCAGTCCTTGCGTTTaGCTTGAACTCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRSSPCV*LELSLL
Trigger: GAGAAGGGAGAGTTCAAGGCAAACGCAAGGACTGGA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGACCACCGTGATATTCTaGGTAACGGACGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWTTVIF*VTDAWL
Trigger: CAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGT...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCT +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQSMLPS*RGQGQP
Trigger: AGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGA...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGGCTTTCTCACAGCCTaGGTGTGCACATTTGTATGG +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSGFLTA*VCTFVW
Trigger: CCATACAAATGTGCACACCCAGGCTGTGAGAAAGCC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGGCTTTCTCACAGCCTaGGTGTGCACATTTGTATGG +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQGFLTA*VCTFVW
Trigger: CCATACAAATGTGCACACCCAGGCTGTGAGAAAGCC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGTGCAGGTGTACACCTTaGCATGCTTCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETCRCTP*HASLCA
Trigger: CGCACACAGTGAAGCATGCCAAGGTGTACACCTGCA...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGGTCAAAGGAACACTaGGGTGGAGGGTTGGGATTG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLRSKEH*GGGLGL
Trigger: CAATCCCAACCCTCCACCCCAGTGTTCCTTTGACCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCGGATCTCTAAGAGCTaGCCAGGTGCTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLRISKS*PGAPPG
Trigger: TCCAGGTGGAGCACCTGGCCAGCTCTTAGAGATCCG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGGAGGGGAGGCTGCTaGATGACACCATCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGRGGC*MTPSAQ
Trigger: CTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGGTAAGTGGCCACACTaGACAAGGTTCTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQGKWPH*TRFYEV
Trigger: GACCTCATAGAACCTTGTCCAGTGTGGCCACTTACC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCTTTTCTCTGTTATCTaGGAGGGCCAGCCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSLFSVI*EGQPLV
Trigger: GACTAGAGGCTGGCCCTCCCAGATAACAGAGAAAAG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRREAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGAATTTCTGGCCCCTTaGGGACCACATCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLREFLAP*GPHLSP
Trigger: AGGGCTGAGATGTGGTCCCCAAGGGGCCAGAAATTC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCAACTTGGGAATTTCTaGCCCCTTGGGGACCACATC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLQLGNF*PLGDHI
Trigger: GATGTGGTCCCCAAGGGGCCAGAAATTCCCAAGTTG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCAACTTGGGAATTTCTaGCCCCTTGGGGACCACATC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETQLGNF*PLGDHI
Trigger: GATGTGGTCCCCAAGGGGCCAGAAATTCCCAAGTTG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTACAGCTCCTTGGGGGTaGGTTGGGGAGACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLTAPWG*VGETES
Trigger: ACTCTCAGTCTCCCCAACCCACCCCCAAGGAGCTGT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGGTCTATCACCAGTGTaGATTCGTGTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETGLSPV*IRVCCW
Trigger: CCAGCAGCACACACGAATCCACACTGGTGATAGACC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCACTCTGTGTCCATACTaGTGCCTGAGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLTLCPY*CLRAGT
Trigger: TGTCCCTGCCCTCAGGCATCAGTATGGACACAGAGT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCCC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKSLRGT*LPNPDP
Trigger: GGGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCATCTCGGGCAGCCCTaGTTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGHLGQP*FQHPLL
Trigger: AAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGTCTTGCCGTCTTTCTaGTGGTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQVLPSF*WSSSSS
Trigger: TGAGGATGATGATGACCATCAGAAAGACGGCAAGAC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGTAGGGCTTAGCCCCTaGGTGTATACGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLVGLSP*VYTDVL
Trigger: CAGCACATCCGTATACACTCAGGGGCTAAGCCCTAC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTCCGTGTACGCCCGATaGCAGTTGTGGCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLSVYAR*QLWHLK
Trigger: CTTCAAGTGCCACAACTGTCATCGGGCGTACACGGA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGTGGGTTGGGGAGACTaGGAGTATAGGGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWVGWGD*EYRVFV
Trigger: TACAAAGACCCTATACTCTCAGTCTCCCCAACCCAC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGGCACCTGTAGGTCTTaGCGTCTTTCTGATGGTCAT +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLGTCRS*RLSDGH
Trigger: ATGACCATCAGAAAGACGGCAAGACCTACAGGTGCC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGCTCACAGCCTGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQLTAWV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCAGGCTGTGAG...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCCTCACAGCCTGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARILTAWV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCAGGCTGTGAG...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGTGTGCGTAGACAGGTaGACCTCTAGTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLVCVDR*TSSEAA
Trigger: TGCAGCCTCACTAGAGGTGCACCTGTCTACGCACAC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGTGTGCGTAGACAGGTaGACCTCTAGTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLVCVDR*TSSEAA
Trigger: TGCAGCCTCACTAGAGGTGCACCTGTCTACGCACAC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTGGAGGGTTGGGATTaGTGTCCCCACCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVEGWD*CPHHPH
Trigger: GTGGGGGTGGTGGGGACAGCAATCCCAACCCTCCAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCCACATCTCAGCCCTTaGCCCCTTCAAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSPHLSP*PLQIKG
Trigger: TCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCCACATCTCAGCCCTTaGCCCCTTCAAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRPHLSP*PLQIKG
Trigger: TCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCCCACATCTCAGCCCTTaGCCCCTTCAAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIPHLSP*PLQIKG
Trigger: TCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGG...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGCCACATCTCAGCCCTTaGCCCCTTCAAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQPHLSP*PLQIKG
Trigger: TCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGG...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGCTAAGTCCAGTCCTTaGGTTTGCCTTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETAKSSP*VCLELS
Trigger: GGAGAGTTCAAGGCAAACGCAAGGACTGGACTTAGC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGCACTCACCCGGAAGTaGTGCTGCAGCTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKALTRK*CCSSCS
Trigger: GGAGCACGAGCTGCAGCACCACTTCCGGGTGAGTGC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGCGGGCACGCACTTCTaGAGCGAGACAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKAGTHF*SETDPH
Trigger: GTGTGGGTCTGTCTCGCTCCAGAAGTGCGTGCCCGC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319770.7
ENST00000361959.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGACCACCGTGATATTCTaGGTAACGGACGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRTTVIF*VTDAWL
Trigger: CAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGAGCTGATGATGCTGTaGTCACAAGAGAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRELMML*SQESLR
Trigger: CCTCAGGCTCTCTTGTGACCACAGCATCATCAGCTC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCTCTGCATCTCCGACTTaGAGTAGAATGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARISASPT*SRMSVS
Trigger: GCTCACTGACATTCTACTCCAAGTCGGAGATGCAGA...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCCAATGTGGGCACTTGTaGGGCTTGGTCTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLQCGHL*GLVSVC
Trigger: ACACACCGAGACCAAGCCCCACAAGTGCCCACATTG...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGACTGGAAGTGTGGTaGTGGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRLEVW*WLLLLL
Trigger: CAGCAGCAGCAACAGCCACCACCACACTTCCAGTCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGGAGACTGGAAGTGTaGTGGTGGCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRRLEV*WWLLLL
Trigger: CAGCAGCAACAGCCACCACCACACTTCCAGTCTCCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCCCTCTTCCCAGTGGGTaGCAGCACGGATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLPLPSG*QHGSLR
Trigger: TCTTAGAGATCCGTGCTGCCACCCACTGGGAAGAGG...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCTTTTCTCTGTTATCTaGGAGGGCCAGCCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWLFSVI*EGQPLV
Trigger: GACTAGAGGCTGGCCCTCCCAGATAACAGAGAAAAG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGCAACTTGGGAATTTCTaGCCCCTTGGGGACCACATC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRQLGNF*PLGDHI
Trigger: GATGTGGTCCCCAAGGGGCCAGAAATTCCCAAGTTG...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCCTCCCACAGCTCCTTaGGGGTGGGTTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKPPTAP*GWVGET
Trigger: AGTCTCCCCAACCCACCCCCAAGGAGCTGTGGGAGG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGTTCTCGATCTGACCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLVLDLT*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGTCAGATCGAGAAC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGTCTTGCCGTCTTTCTaGTGGTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWVLPSF*WSSSSS
Trigger: TGAGGATGATGATGACCATCAGAAAGACGGCAAGAC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGGAGTAGAATGTCAGTaGGCACATCCGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLGVECQ*AHPAPV
Trigger: TACAGGTGCCGGATGTGCTCACTGACATTCTACTCC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGAGGCAGATGTCCTTATaGTGCTCCGCCGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRRQMSL*CSAVLY
Trigger: GTATAAGACGGCGGAGCATCATAAGGACATCTGCCT...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTGTGAAGGAAAGCCGTaGCAGAGGCCCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGCEGKP*QRPKEM
Trigger: CATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGGGAGGCTGCTGGATaGCACCATCAGCTCAGTATT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGEAAG*HHQLSI
Trigger: AATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGTGGGTTGGGGAGACTaGGAGTATAGGGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRVGWGD*EYRVFV
Trigger: TACAAAGACCCTATACTCTCAGTCTCCCCAACCCAC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCTCACAGCCTGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETLTAWV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCAGGCTGTGAG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTTATCTTTGTTGTGTTaGCGTCTGTGGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRLSLLC*RLWDCR
Trigger: TCTGCAGTCCCACAGACGGCAACACAACAAAGATAA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGCATGCTTCACTGTGTaGGTAGACAGGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLACFTV*VDRCTS
Trigger: AGAGGTGCACCTGTCTACGCACACAGTGAAGCATGC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCAGGTCAGGGACAACCTaGAGGGCAGCAGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGRSGTT*RAAVIS
Trigger: ACTGATGACTGCTGCCCTGCAGGTTGTCCCTGACCT...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355772.8
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKWVTDA*LCGVSW
Trigger: CCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGAGCTGATGATGCTGTaGTCACAAGAGAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLELMML*SQESLR
Trigger: CCTCAGGCTCTCTTGTGACCACAGCATCATCAGCTC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRSMLPS*RGQGQP
Trigger: AGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTCTGCATCTCCGACTTaGAGTAGAATGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSASPT*SRMSVS
Trigger: GCTCACTGACATTCTACTCCAAGTCGGAGATGCAGA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTTGTGTTGCCGTCTGTaGGACTGCAGATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRLCCRL*DCRLES
Trigger: ACTCTCCAATCTGCAGTCCCACAGACGGCAACACAA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCAGGAGACTGGAAGTGTaGTGGTGGCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGRRLEV*WWLLLL
Trigger: CAGCAGCAACAGCCACCACCACACTTCCAGTCTCCT...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTAGGTCAAAGGAACACTaGGGTGGAGGGTTGGGATTG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLRSKEH*GGGLGL
Trigger: CAATCCCAACCCTCCACCCCAGTGTTCCTTTGACCT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCCTCTTCCCAGTGGGTaGCAGCACGGATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGPLPSG*QHGSLR
Trigger: TCTTAGAGATCCGTGCTGCCACCCACTGGGAAGAGG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTTCCTCTTCCCAGTaGGTGGCAGCACGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGSSSSQ*VAARIS
Trigger: AGAGATCCGTGCTGCCACCCACTGGGAAGAGGAAGA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLREAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCAGTGCGGGCACTTGTaGGGCTTGATGGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKQCGHL*GLMVSV
Trigger: CACGGAGACCATCAAGCCCCACAAGTGCCCGCACTG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCAAACCCGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCATCTCGGGCAGCCCTaGTTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKHLGQP*FQHPLL
Trigger: AAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGAGTAGAATGTCAGTaGGCACATCCGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGVECQ*AHPAPV
Trigger: TACAGGTGCCGGATGTGCTCACTGACATTCTACTCC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGGCAGATGTCCTTATaGTGCTCCGCCGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRQMSL*CSAVLY
Trigger: GTATAAGACGGCGGAGCATCATAAGGACATCTGCCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAAGGATGGTATCCTGTaGAGGAAAGCCGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLKDGIL*RKAVTE
Trigger: CTCTGTCACGGCTTTCCTTCACAGGATACCATCCTT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCTGGACAAGGTTCTATaGGGTCATAGCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLDKVL*GHSKSF
Trigger: GAAGGATTTGCTATGACCTCATAGAACCTTGTCCAG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCTGGACAAGGTTCTATaGGGTCATAGCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: APTPNLLLPAVNRKQSETLDKVL*GHSKSF
Trigger: GAAGGATTTGCTATGACCTCATAGAACCTTGTCCAG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGGCACCTGTAGGTCTTaGCGTCTTTCTGATGGTCAT +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLGTCRS*RLSDGH
Trigger: ATGACCATCAGAAAGACGGCAAGACCTACAGGTGCC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTTATCTTTGTTGTGTTaGCGTCTGTGGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLSLLC*RLWDCR
Trigger: TCTGCAGTCCCACAGACGGCAACACAACAAAGATAA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGTTATCTTTGTTGTGTTaGCGTCTGTGGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWLSLLC*RLWDCR
Trigger: TCTGCAGTCCCACAGACGGCAACACAACAAAGATAA...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGTGTACACCTTGGCATaGTTCACTGTGTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLVYTLA*FTVCVD
Trigger: GTCTACGCACACAGTGAAGCATGCCAAGGTGTACAC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTCCAGTCCTTGCGTTTaGCTTGAACTCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLSSPCV*LELSLL
Trigger: GAGAAGGGAGAGTTCAAGGCAAACGCAAGGACTGGA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGCTAAGTCCAGTCCTTaGGTTTGCCTTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLAKSSP*VCLELS
Trigger: GGAGAGTTCAAGGCAAACGCAAGGACTGGACTTAGC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCT +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLSMLPS*RGQGQP
Trigger: AGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTCTGCATCTCCGACTTaGAGTAGAATGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRSASPT*SRMSVS
Trigger: GCTCACTGACATTCTACTCCAAGTCGGAGATGCAGA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGGCTTTCTCACAGCCTaGGTGTGCACATTTGTATGG +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLGFLTA*VCTFVW
Trigger: CCATACAAATGTGCACACCCAGGCTGTGAGAAAGCC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTTGTGTTGCCGTCTGTaGGACTGCAGATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLLCCRL*DCRLES
Trigger: ACTCTCCAATCTGCAGTCCCACAGACGGCAACACAA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTGCAGGTGTACACCTTaGCATGCTTCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGCRCTP*HASLCA
Trigger: CGCACACAGTGAAGCATGCCAAGGTGTACACCTGCA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCGGATCTCTAAGAGCTaGCCAGGTGCTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKRISKS*PGAPPG
Trigger: TCCAGGTGGAGCACCTGGCCAGCTCTTAGAGATCCG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAGAGGCCCAAGGAGATaGAGCCAAGGCCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKRGPRR*SQGLSR
Trigger: CCTTGACAGGCCTTGGCTCCATCTCCTTGGGCCTCT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCTTTTCTCTGTTATCTaGGAGGGCCAGCCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLLFSVI*EGQPLV
Trigger: GACTAGAGGCTGGCCCTCCCAGATAACAGAGAAAAG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTCCGTGTACGCCCGATaGCAGTTGTGGCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKSVYAR*QLWHLK
Trigger: CTTCAAGTGCCACAACTGTCATCGGGCGTACACGGA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTGTGAAGGAAAGCCGTaGCAGAGGCCCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKCEGKP*QRPKEM
Trigger: CATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGCTAAGTCCAGTCCTTaGGTTTGCCTTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGAKSSP*VCLELS
Trigger: GGAGAGTTCAAGGCAAACGCAAGGACTGGACTTAGC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGSMLPS*RGQGQP
Trigger: AGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTCTGCATCTCCGACTTaGAGTAGAATGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLSASPT*SRMSVS
Trigger: GCTCACTGACATTCTACTCCAAGTCGGAGATGCAGA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGCTTTCTCACAGCCTaGGTGTGCACATTTGTATGG +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGFLTA*VCTFVW
Trigger: CCATACAAATGTGCACACCCAGGCTGTGAGAAAGCC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTTGTGTTGCCGTCTGTaGGACTGCAGATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGLCCRL*DCRLES
Trigger: ACTCTCCAATCTGCAGTCCCACAGACGGCAACACAA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp ATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTCTCAGGGACTGAGGTTTCCCACCAAGAGTTaGAGAAAGAAGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: IGSKVRRCRGRNGSQGLRFPTKS*RKKTPG
Trigger: TCCTGGTGTCTTCTTTCTCCAACTCTTGGTGGGAAA...CCTCAGTCCCTGAGAGCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGGTAAGTGGCCACACTaGACAAGGTTCTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGGKWPH*TRFYEV
Trigger: GACCTCATAGAACCTTGTCCAGTGTGGCCACTTACC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGAGGCTGGTTGCATTTaGGGCTCCCTTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGEAGCI*GSLFSV
Trigger: AACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCAAACCCGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTCCTTGCGTTTGCCTTaGACTCTCCCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKSLRLP*TLPSPQ
Trigger: TTGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGCATGCTTCACTGTGTaGGTAGACAGGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKACFTV*VDRCTS
Trigger: AGAGGTGCACCTGTCTACGCACACAGTGAAGCATGC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCAACTTGGGAATTTCTaGCCCCTTGGGGACCACATC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKQLGNF*PLGDHI
Trigger: GATGTGGTCCCCAAGGGGCCAGAAATTCCCAAGTTG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTGGGTTGGGGAGACTaGGAGTATAGGGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVGWGD*EYRVFV
Trigger: TACAAAGACCCTATACTCTCAGTCTCCCCAACCCAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTGTACACCTTGGCATaGTTCACTGTGTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVYTLA*FTVCVD
Trigger: GTCTACGCACACAGTGAAGCATGCCAAGGTGTACAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTCCAGTCCTTGCGTTTaGCTTGAACTCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKSSPCV*LELSLL
Trigger: GAGAAGGGAGAGTTCAAGGCAAACGCAAGGACTGGA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGGTAAGTGGCCACACTaGACAAGGTTCTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKGKWPH*TRFYEV
Trigger: GACCTCATAGAACCTTGTCCAGTGTGGCCACTTACC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR TCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTCTTGCCGTCTTTCTaGTGGTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVLPSF*WSSSSS
Trigger: TGAGGATGATGATGACCATCAGAAAGACGGCAAGAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGCTCACAGCCTGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKLTAWV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCAGGCTGTGAG...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGTTCAGAAAAAGGATaGTATCCTGTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLSSEKG*YPVKES
Trigger: GCTTTCCTTCACAGGATACCATCCTTTTTCTGAACT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAATAGAACAAGAGGCTaGTTGCATTTGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKNRTRG*LHLGLP
Trigger: AGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR GCA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGTTATCTTTGTTGTGTTaGCGTCTGTGGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: EKERGFKEIRKTITHTSKLSLLC*RLWDCR
Trigger: TCTGCAGTCCCACAGACGGCAACACAACAAAGATAA...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS GCA 90 bp GGTGGTGGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGTGATGCCTGGGAGGCCTGGGCCTGGGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GGGCCCCCCCCCCCC*CCCDAWEAWAWAWA
Trigger: AGCCCAGGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS CCA 90 bp AGGGAGGGGAAAAAGCGCAAGGCGCAGCGCGCGGGCACGCACTTCTaGAGCGAGACAGACCCACACACTCACACGCACGGAACGCGCGCG +
Preference number: 5 (lower is better)
Translates to: REGKKRKAQRAGTHF*SETDPHTHTHGTRA
Trigger: CGCGCGCGTTCCGTGCGTGTGAGTGTGTGGGTCTGTCTCGCTCCAGAAGTGCGTGCCCGCGCGCTGCGCCTTGCGCTTTTTCCCCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000436774.6
ENST00000544482.1
ENST00000683879.1
CDS GCA 90 bp CTGAGCCTGAGCCTGGGCTTGAGCTTGAGCCTGGGCCTGGGCCACTaGTGCCGCTGCTGCTGCTGCCTGCACCTGTTGCTGAAGATCAGG +
Preference number: 5 (lower is better)
Translates to: LSLSLGLSLSLGLGH*CRCCCCLHLLLKIR
Trigger: CCTGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCTCAGGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS GCA 90 bp GGGGCTGCCCCAGGAGACTGGAAGTGTGGTGGTGGCTGTTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGATGCC +
Preference number: 5 (lower is better)
Translates to: GAAPGDWKCGGGCCC*CCCCCCCCCCCCDA
Trigger: GGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 90 bp GGCTTGAGCTTGAGCCTGGGCCTGGGCCACTGCTGCCGCTGCTGCTaGTGCCTGCACCTGTTGCTGAAGATCAGGCGGGTTGTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: GLSLSLGLGHCCRCC*CLHLLLKIRRVVFA
Trigger: CGCAAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS GCA 90 bp GGAGACTGGAAGTGTGGTGGTGGCTGTTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGTGATGCCTGGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GDWKCGGGCCCCCCC*CCCCCCCCDAWEAW
Trigger: CCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 90 bp GCCCCAGGAGACTGGAAGTGTGGTGGTGGCTGTTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGATGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: APGDWKCGGGCCCCC*CCCCCCCCCCDAWE
Trigger: CTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 90 bp CTGGGCTTGAGCTTGAGCCTGGGCCTGGGCCACTGCTGCCGCTGCTaGTGCTGCCTGCACCTGTTGCTGAAGATCAGGCGGGTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LGLSLSLGLGHCCRC*CCLHLLLKIRRVVF
Trigger: AAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS TCA 90 bp GGCCTGGGCCACTGCTGCCGCTGCTGCTGCTGCCTGCACCTGTTGTaGTGTGTATGCCCGACTGCAGATAGTGCAGGTGTACACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GLGHCCRCCCCLHLL*CVCPTADSAGVHLG
Trigger: GCCAAGGTGTACACCTGCACTATCTGCAGTCGGGCATACACATCACAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545946.1
CDS CCA 90 bp CACCACCTCCGCCTCCTTCCTCGGTTAGGGTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCTGCAGGGCTTGTGAGCCAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: HHLRLLPRLGSMLPS*RGQGQPAGLVSQGE
Trigger: TTCCCCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGACCCTAACCGAGGAAGGAGGCGGAGGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000540915.5
ENST00000542519.1
ENST00000683879.1
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCAGCCTGGGCTTGAGCTaGAGCCTGGGCCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSLGLS*SLGLGH
Trigger: GTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCT...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp CCGGCACCCAGGGTCACACAGCAAATTCGTGGTGGAGCCGGGAACTaGATCCATGAGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGTT +
Preference number: 5 (lower is better)
Translates to: PAPRVTQQIRGGAGN*IHEPKALSISCAAV
Trigger: AACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAATTTGCTGTGTGACCCTGGGTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417772.7
ENST00000683879.1
CDS CCA 90 bp GGAGTAGGTGCAGGCAACATGGTCTTAGGGTTCACGGCCAGGTGGTaGGGTAAACCAAGAGCAGCCTTACCGGGTGTGCTGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GVGAGNMVLGFTARW*GKPRAALPGVLLKV
Trigger: CACCTTCAGCAGCACACCCGGTAAGGCTGCTCTTGGTTTACCCCACCACCTGGCCGTGAACCCTAAGACCATGTTGCCTGCACCTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542519.1
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACTGGGTAACGGACGCTaGGCTGTGTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLGNGR*AVWGQL
Trigger: CAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCTGGGCTTGAGCTaGAGCCTGGGCCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWSLGLS*SLGLGH
Trigger: GTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCT...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCAGCCTGGGCTTGAGCTaGAGCCTGGGCCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLSLGLS*SLGLGH
Trigger: GTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCT...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp CAGGGTCACACAGCAAATTCGTGGTGGAGCCGGGAACTGAATCCATaGGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGTTCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: QGHTANSWWSRELNP*AQGSVHFLCRSSLR
Trigger: GCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAATTTGCTGTGTGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417772.7
ENST00000683879.1
CDS CCA 90 bp GCAGTCATCAGTCCTGTAGACGGCACAGGGACCACCGTGATATTCTaGGTAACGGACGCTTGGCTGTGTGGGGTCAGCTGGTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: AVISPVDGTGTTVIF*VTDAWLCGVSWSDL
Trigger: CAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGCCGTCTACAGGACTGATGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CCA 90 bp AGAGGAGTAGGTGCAGGCAACATGGTCTTAGGGTTCACGGCCAGGTaGTGGGGTAAACCAAGAGCAGCCTTACCGGGTGTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RGVGAGNMVLGFTAR*WGKPRAALPGVLLK
Trigger: CTTCAGCAGCACACCCGGTAAGGCTGCTCTTGGTTTACCCCACCACCTGGCCGTGAACCCTAAGACCATGTTGCCTGCACCTACTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542519.1
CDS-3UTR CAA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGCACTGGGGTGGAGGGTaGGGATTGCTGTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQHWGGG*GLLSPP
Trigger: TGGTGGGGACAGCAATCCCAACCCTCCACCCCAGTG...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp GCCTGGGCCACTGCTGCCGCTGCTGCTGCTGCCTGCACCTGTTGCTaGAGATCAGGCGGGTTGTGTTTGCGCATATGTTTCATAAGGTAT +
Preference number: 5 (lower is better)
Translates to: AWATAAAAAAACTCC*RSGGLCLRICFIRY
Trigger: ATACCTTATGAAACATATGCGCAAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS CCA 90 bp ACCGTGATATTCTGGGTAACGGACGCTTGGCTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTGTCCATACTGATGCCTGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: TVIFWVTDAWLCGVS*SDLDSVSILMPEGR
Trigger: CCTGCCCTCAGGCATCAGTATGGACACAGAGTCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CCA 90 bp GTAGACGGCACAGGGACCACCGTGATATTCTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGGTCTGACTTGGACTCTGTGTCCATA +
Preference number: 5 (lower is better)
Translates to: VDGTGTTVIFWVTDA*LCGVSWSDLDSVSI
Trigger: TATGGACACAGAGTCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGCCGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CCA 90 bp CAACCTGCAGGGCTTGTGAGCCAGGGGGAAGAGCTGAGACAATCATaGGAGCCGAAATGGGGAAGGTCTGAGCTGATGATGCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QPAGLVSQGEELRQS*EPKWGRSELMMLWS
Trigger: TGACCACAGCATCATCAGCTCAGACCTTCCCCATTTCGGCTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTGCAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000540915.5
ENST00000542519.1
ENST00000683879.1
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCTTGCTGCCCTCCCCTaGCACTCACCCGGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETLAALP*HSPGSG
Trigger: ACCACTTCCGGGTGAGTGCAAGGGGAGGGCAGCAAG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCACTGGGGTGGAGGGTaGGGATTGCTGTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLHWGGG*GLLSPP
Trigger: TGGTGGGGACAGCAATCCCAACCCTCCACCCCAGTG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAACCAAACCCGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQPNPDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTGG...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCCAAACCCGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRPNPDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTGG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCGTCGATGCTACCTTCTaGGAGAGGTCAGGGACAACC +
Preference number: 5 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIVDATF*ERSGTT
Trigger: GGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGAC...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCGTGCAGGTGTACACCTaGGCATGCTTCACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSVQVYT*ACFTVC
Trigger: GCACACAGTGAAGCATGCCAAGGTGTACACCTGCAC...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCACTGGGGTGGAGGGTaGGGATTGCTGTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLHWGGG*GLLSPP
Trigger: TGGTGGGGACAGCAATCCCAACCCTCCACCCCAGTG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCCAGTTTTAGAAGCTTaGCTTGGGAGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSPVLEA*LGRGGC
Trigger: GCAGCCTCCCCTCCCAAGCAAAGCTTCTAAAACTGG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCCACCTGTGACCAACTaGGGAATTTCTGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSPPVTN*GISGPL
Trigger: CAAGGGGCCAGAAATTCCCAAGTTGGTCACAGGTGG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGTCCTTGCGTTTGCCTaGAACTCTCCCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRVLAFA*NSPFSA
Trigger: TGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGAC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp GCTCGTGAGCACACTTCAGTGTCTGTCCTCCTTAGGGATCAAGGATaGGCACTTCATACCTCTGGCCTTCTAGAGAGAAGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: AREHTSVSVLLRDQG*ALHTSGLLERSPGR
Trigger: TCTGCCTGGGCTTCTCTCTAGAAGGCCAGAGGTATGAAGTGCTCATCCTTGATCCCTAAGGAGGACAGACACTGAAGTGTGCTCACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS CCA 90 bp GAATTCTATCACCAGCGTTTGGGTTTCACTCCTAGGCTCAGAGACTaGTCCTTGTTCGTTCCCAGGCCACAGGTAACCAGGGGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: EFYHQRLGFTPRLRD*SLFVPRPQVTRGQR
Trigger: TCTCTGACCCCTGGTTACCTGTGGCCTGGGAACGAACAAGGACCAGTCTCTGAGCCTAGGAGTGAAACCCAAACGCTGGTGATAGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535485.5
ENST00000540915.5
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGGTCAGCTGGTCTGACTaGGACTCTGTGTCCATACTG +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRVSWSD*DSVSIL
Trigger: CAGTATGGACACAGAGTCCAAGTCAGACCAGCTGAC...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGTCGATGCTACCTTCTaGGAGAGGTCAGGGACAACC +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWVDATF*ERSGTT
Trigger: GGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGAC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGTCGATGCTACCTTCTaGGAGAGGTCAGGGACAACC +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLVDATF*ERSGTT
Trigger: GGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGAC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGGTGCAGGTGTACACCTaGGCATGCTTCACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETVQVYT*ACFTVC
Trigger: GCACACAGTGAAGCATGCCAAGGTGTACACCTGCAC...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCGTGCAGGTGTACACCTaGGCATGCTTCACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLVQVYT*ACFTVC
Trigger: GCACACAGTGAAGCATGCCAAGGTGTACACCTGCAC...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCCAGTTTTAGAAGCTTaGCTTGGGAGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETPVLEA*LGRGGC
Trigger: GCAGCCTCCCCTCCCAAGCAAAGCTTCTAAAACTGG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCCAGTTTTAGAAGCTTaGCTTGGGAGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWPVLEA*LGRGGC
Trigger: GCAGCCTCCCCTCCCAAGCAAAGCTTCTAAAACTGG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGAGAGGCTGGTTGCATTaGGGGCTCCCTTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRRGWLH*GLPFLC
Trigger: ACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTCT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAAAGAACAAGAGGCTGGTaGCATTTGGGGCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQRTRGW*HLGLPF
Trigger: AAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCT...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp CTAGTGAGGCTGCATCCGTGTACGCCCGATGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGTGTTGCCGTCTGTGGGACTGCAGAT +
Preference number: 5 (lower is better)
Translates to: LVRLHPCTPDDSCGT*RVYLCCVAVCGTAD
Trigger: ATCTGCAGTCCCACAGACGGCAACACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCATCGGGCGTACACGGATGCAGCCTCACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGGTCAGCTGGTCTGACTaGGACTCTGTGTCCATACTG +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWVSWSD*DSVSIL
Trigger: CAGTATGGACACAGAGTCCAAGTCAGACCAGCTGAC...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCCTGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCAGG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCTGTGGGACTGCAGATaGGAGAGTTGTGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWLWDCR*ESCVKA
Trigger: AGCCTTCACACAACTCTCCAATCTGCAGTCCCACAG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCTGTGGGACTGCAGATaGGAGAGTTGTGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLWDCR*ESCVKA
Trigger: AGCCTTCACACAACTCTCCAATCTGCAGTCCCACAG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCTGTGGGACTGCAGATaGGAGAGTTGTGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETLWDCR*ESCVKA
Trigger: AGCCTTCACACAACTCTCCAATCTGCAGTCCCACAG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAATTTATCTTTGTTGTGTaGCCGTCTGTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQFIFVV*PSVGLQ
Trigger: CTGCAGTCCCACAGACGGCAACACAACAAAGATAAA...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAATCAGGCGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCGCCTGA...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAGCTCAGTATTCCTTaGCAATCAGGAGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSQLSIP*QSGGLM
Trigger: CATCAGCCCTCCTGATTGCAAAGGAATACTGAGCTG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGAGGCTGGTTGCATTaGGGGCTCCCTTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWRGWLH*GLPFLC
Trigger: ACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTCT...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCAGAACAAGAGGCTGGTaGCATTTGGGGCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: KEDTRTTSSSSQWVAARIRTRGW*HLGLPF
Trigger: AAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCT...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TGGGAGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGACCACATCTCAGCCCTaGCCCCCTTCAAATAAAAGG +
Preference number: 5 (lower is better)
Translates to: WEGRLLDDTISSVFLCNQTTSQP*PPSNKR
Trigger: CCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGGT...CTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGACCACATCTCAGCCCTaGCCCCCTTCAAATAAAAGG +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRTTSQP*PPSNKR
Trigger: CCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGGT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCCAAACCCGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLPNPDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCGGGTTTGG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTGTCGATGCTACCTTCTaGGAGAGGTCAGGGACAACC +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLVDATF*ERSGTT
Trigger: GGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGAC...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCCTGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCAGG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCCTGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCAGG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCTGCAGATTGGAGAGTaGTGTGAAGGCTTTCTCACA +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSLQIGE*CEGFLT
Trigger: TGTGAGAAAGCCTTCACACAACTCTCCAATCTGCAG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGAAGGGTTTATCTTTGTaGTGTTGCCGTCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRKGLSL*CCRLWD
Trigger: GTCCCACAGACGGCAACACAACAAAGATAAACCCTT...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAATTGAAGGGTTTATCTTaGTTGTGTTGCCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GWYPVKESRDRGPRRWSQLKGLS*LCCRLW
Trigger: CCACAGACGGCAACACAACAAAGATAAACCCTTCAA...TTGGCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCTCAGGCGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCGCCTGA...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCAGCTCAGTATTCCTTaGCAATCAGGAGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLQLSIP*QSGGLM
Trigger: CATCAGCCCTCCTGATTGCAAAGGAATACTGAGCTG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGCAGCTCAGTATTCCTTaGCAATCAGGAGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETQLSIP*QSGGLM
Trigger: CATCAGCCCTCCTGATTGCAAAGGAATACTGAGCTG...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCCACCTGTGACCAACTaGGGAATTTCTGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLPPVTN*GISGPL
Trigger: CAAGGGGCCAGAAATTCCCAAGTTGGTCACAGGTGG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCGTCCTTGCGTTTGCCTaGAACTCTCCCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLVLAFA*NSPFSA
Trigger: TGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGAC...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGCTGCAGATTGGAGAGTaGTGTGAAGGCTTTCTCACA +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWLQIGE*CEGFLT
Trigger: TGTGAGAAAGCCTTCACACAACTCTCCAATCTGCAG...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTTTATCTTTGTTGTGTaGCCGTCTGTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLFIFVV*PSVGLQ
Trigger: CTGCAGTCCCACAGACGGCAACACAACAAAGATAAA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGAAGGGTTTATCTTTGTaGTGTTGCCGTCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETKGLSL*CCRLWD
Trigger: GTCCCACAGACGGCAACACAACAAAGATAAACCCTT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGAAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTGGCAGCACGGATCTTGAAGGGTTTATCTTaGTTGTGTTGCCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KEDTRTTSSSSQWVAARILKGLS*LCCRLW
Trigger: CCACAGACGGCAACACAACAAAGATAAACCCTTCAA...GATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAAAAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGTCAGGCGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: EKGWYPVKESRDRGPRRWSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCGCCTGA...CCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GCCCCTACCCCAAATCTCCTTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGACATCAGCCCAAACTTaGAGGATAAGGAGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: APTPNLLLPAVNRKQSETTSAQT*RIRRVR
Trigger: CCTTACCCTCCTTATCCTCAAAGTTTGGGCTGATGT...CGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAAGGAGATTTGGGGTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGAGGCTGGTTGCATTaGGGGCTCCCTTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRGWLH*GLPFLC
Trigger: ACAGAGAAAAGGGAGCCCCAAATGCAACCAGCCTCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AAAGGATGGTATCCTGTGAAGGAAAGCCGTGACAGAGGCCCAAGGAGATGGAGCCAGGGACTGAGGCATTaGAGAAACCTCTGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: KGWYPVKESRDRGPRRWSQGLRH*RNLCSF
Trigger: AAAAGAACAGAGGTTTCTCAAATGCCTCAGTCCCTG...GCTCCATCTCCTTGGGCCTCTGTCACGGCTTTCCTTCACAGGATACCATCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp AGGGGAGGCTGCTGGATGACACCATCAGCTCAGTATTCCTTTGCAATCAGGAGGCAGGGACTGAGGCATTaGAGAAACCTCTGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: RGGCWMTPSAQYSFAIRRQGLRH*RNLCSF
Trigger: AAAAGAACAGAGGTTTCTCAAATGCCTCAGTCCCTG...CCTCCTGATTGCAAAGGAATACTGAGCTGATGGTGTCATCCAGCAGCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCCCACCTGTGACCAACTaGGGAATTTCTGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGPPVTN*GISGPL
Trigger: CAAGGGGCCAGAAATTCCCAAGTTGGTCACAGGTGG...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCGTCCTTGCGTTTGCCTaGAACTCTCCCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGVLAFA*NSPFSA
Trigger: TGCGGAGAAGGGAGAGTTCAAGGCAAACGCAAGGAC...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCTTGAAGGGTTTATCTTaGTTGTGTTGCCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLLKGLS*LCCRLW
Trigger: CCACAGACGGCAACACAACAAAGATAAACCCTTCAA...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCCAGCTCAGTATTCCTTaGCAATCAGGAGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLQLSIP*QSGGLM
Trigger: CATCAGCCCTCCTGATTGCAAAGGAATACTGAGCTG...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCAGAACAAGAGGCTGGTaGCATTTGGGGCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLRTRGW*HLGLPF
Trigger: AAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp CCGCAACACCCCTGTTTTGGAGTTTCACAGATAACACAAAGCCTCCCACAGCTCCAGGGACTGAGGCATTaGAGAAACCTCTGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: PQHPCFGVSQITQSLPQLQGLRH*RNLCSF
Trigger: AAAAGAACAGAGGTTTCTCAAATGCCTCAGTCCCTG...GAGCTGTGGGAGGCTTTGTGTTATCTGTGAAACTCCAAAACAGGGGTGTTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTACCACATCTCAGCCCTaGCCCCCTTCAAATAAAAGG +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLTTSQP*PPSNKR
Trigger: CCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGGT...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp ACTGAGACTTGGAGAGAGCAAGAAAGCAACACCACTTACCTGACCTaGGACTGTGGGGATAGAAGGCCAGAAGTACGGGTTAGAATTGAA +
Preference number: 5 (lower is better)
Translates to: TETWREQESNTTYLT*DCGDRRPEVRVRIE
Trigger: TTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGGTAAGTGGTGTTGCTTTCTTGCTCTCTCCAAGTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS TCA 90 bp TTACTACTGAGACTTGGAGAGAGCAAGAAAGCAACACCACTTACCTaGCCTGAGACTGTGGGGATAGAAGGCCAGAAGTACGGGTTAGAA +
Preference number: 5 (lower is better)
Translates to: LLLRLGESKKATPLT*PETVGIEGQKYGLE
Trigger: TTCTAACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGGTAAGTGGTGTTGCTTTCTTGCTCTCTCCAAGTCTCAGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS GCA 90 bp ATCAGTGAATATCATATAGTCACTGCAGCTCCCCGACGTAGCTCTTaGCCCAGAGAAGCTCTGTGTCCACTTGAATCTCCAGTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ISEYHIVTAAPRRSS*PREALCPLESPVLF
Trigger: AAACAACACTGGAGATTCAAGTGGACACAGAGCTTCTCTGGGGCAAGAGCTACGTCGGGGAGCTGCAGTGACTATATGATATTCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537383.1
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCCTGCAGATTGGAGAGTaGTGTGAAGGCTTTCTCACA +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLLQIGE*CEGFLT
Trigger: TGTGAGAAAGCCTTCACACAACTCTCCAATCTGCAG...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTTATCTTTGTTGTGTaGCCGTCTGTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLFIFVV*PSVGLQ
Trigger: CTGCAGTCCCACAGACGGCAACACAACAAAGATAAA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTGCAGGTGTACACCTaGGCATGCTTCACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVQVYT*ACFTVC
Trigger: GCACACAGTGAAGCATGCCAAGGTGTACACCTGCAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCTCAGGCGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCGCCTGA...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTCTCACATCAGCCCAAACTTaGAGGATAAGGAGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FAGKNRTRGWLHLGLPFLTSAQT*RIRRVR
Trigger: CCTTACCCTCCTTATCCTCAAAGTTTGGGCTGATGT...GAGAAAAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGGTCAGCTGGTCTGACTaGGACTCTGTGTCCATACTG +
Preference number: 5 (lower is better)
Translates to: EKERGFKEIRKTITHTSKVSWSD*DSVSIL
Trigger: CAGTATGGACACAGAGTCCAAGTCAGACCAGCTGAC...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCTTTATCTTTGTTGTGTaGCCGTCTGTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGFIFVV*PSVGLQ
Trigger: CTGCAGTCCCACAGACGGCAACACAACAAAGATAAA...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp TTCTACCAGCAGTCAATAGGAAGCAAAGTGAGACGATGTAGGGGAAGAAATGGCAAGGGTTTATCTTTGTaGTGTTGCCGTCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: FYQQSIGSKVRRCRGRNGKGLSL*CCRLWD
Trigger: GTCCCACAGACGGCAACACAACAAAGATAAACCCTT...GCCATTTCTTCCCCTACATCGTCTCACTTTGCTTCCTATTGACTGCTGGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTTTGAAGGGTTTATCTTaGTTGTGTTGCCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLLKGLS*LCCRLW
Trigger: CCACAGACGGCAACACAACAAAGATAAACCCTTCAA...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS-3UTR CAA 90 bp GTTCTTTTGCAGGCAAGAATAGAACAAGAGGCTGGTTGCATTTGGGGCTCCCTTCAGGGACTGAGGCATTaGAGAAACCTCTGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: VLLQARIEQEAGCIWGSLQGLRH*RNLCSF
Trigger: AAAAGAACAGAGGTTTCTCAAATGCCTCAGTCCCTG...AAGGGAGCCCCAAATGCAACCAGCCTCTTGTTCTATTCTTGCCTGCAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS TCA 90 bp AGCATGTGGTGTACCTTCAGTCTCCATAGTAACAGAACTTACTACTaGGACTTGGAGAGAGCAAGAAAGCAACACCACTTACCTGACCTG +
Preference number: 5 (lower is better)
Translates to: SMWCTFSLHSNRTYY*DLERARKQHHLPDL
Trigger: CAGGTCAGGTAAGTGGTGTTGCTTTCTTGCTCTCTCCAAGTCTCAGTAGTAAGTTCTGTTACTATGGAGACTGAAGGTACACCACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS CCA 90 bp ATTAGAGAAAAGTTGTTTCTACTCCAGGTACGTGTCTGTCTCCCATaGATCAGTGAATATCATATAGTCACTGCAGCTCCCCGACGTAGC +
Preference number: 5 (lower is better)
Translates to: IREKLFLLQVRVCLP*ISEYHIVTAAPRRS
Trigger: GCTACGTCGGGGAGCTGCAGTGACTATATGATATTCACTGATCCATGGGAGACAGACACGTACCTGGAGTAGAAACAACTTTTCTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537383.1
CDS-3UTR CAA 90 bp GAGAAGGAGAGAGGCTTCAAGGAAATCCGTAAAACCATAACACACACTTCTAAGAAGGGTTTATCTTTGTaGTGTTGCCGTCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: EKERGFKEIRKTITHTSKKGLSL*CCRLWD
Trigger: GTCCCACAGACGGCAACACAACAAAGATAAACCCTT...CTTAGAAGTGTGTGTTATGGTTTTACGGATTTCCTTGAAGCCTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
CDS CAA 90 bp GGCCTGGGCCTGGGCCTGGGCTTGAGCCTGAGCCTGAGCCTGGGCTaGAGCTTGAGCCTGGGCCTGGGCCACTGCTGCCGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GLGLGLGLSLSLSLG*SLSLGLGHCCRCCC
Trigger: GCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCTCAGGCTCAGGCTCAAGCCCAGGCCCAGGCCCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp GGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGTGATGCCTGGGAGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GCCCCCCCCCCC*CCCCDAWEAWA
Trigger: GGCCCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp TGCTGCCCTCCCCTTGCACTCACCCGGAAGTGGTGCTaGAGCTCGTGCTCCCGCGAACCCCAGTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: CCPPLALTRKWC*SSCSREPQFLH
Trigger: GTGGAGGAACTGGGGTTCGCGGGAGCACGAGCTGCAGCACCACTTCCGGGTGAGTGCAAGGGGAGGGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS GCA 72 bp CCTTGCTGCCCTCCCCTTGCACTCACCCGGAAGTGGTaGTGCAGCTCGTGCTCCCGCGAACCCCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: PCCPPLALTRKW*CSSCSREPQFL
Trigger: GAGGAACTGGGGTTCGCGGGAGCACGAGCTGCAGCACCACTTCCGGGTGAGTGCAAGGGGAGGGCAGCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319770.7
CDS GCA 72 bp GGTGGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGTGATGCCTGGGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGCCCCCCCCCC*CCCCCDAWEAW
Trigger: CCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp GGTGGTGGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGTGATGCCTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GGGCCCCCCCCC*CCCCCCDAWEA
Trigger: GGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp TGTGGTGGTGGCTGTTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGTGATGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: CGGGCCCCCCCC*CCCCCCCDAWE
Trigger: CTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp CCAGGAGACTGGAAGTGTGGTGGTGGCTGTTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGDWKCGGGCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp AAGTGTGGTGGTGGCTGTTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGTGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: KCGGGCCCCCCC*CCCCCCCCDAW
Trigger: CCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp TGGAAGTGTGGTGGTGGCTGTTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGTGATGCC +
Preference number: 6 (lower is better)
Translates to: WKCGGGCCCCCC*CCCCCCCCCDA
Trigger: GGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS GCA 72 bp GGAGACTGGAAGTGTGGTGGTGGCTGTTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GDWKCGGGCCCC*CCCCCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS TCA 72 bp GGAGAGGACATAAGGGTCATTCATCTCGGGCAGCCCTaGTTCCAGCATCCGCTTCTTCTTCCGGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GEDIRVIHLGQP*FQHPLLLPAPG
Trigger: CCCCGGGGCCGGAAGAAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATGAATGACCCTTATGTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000542519.1
ENST00000683879.1
CDS CCA 72 bp TCCGCCGTCTTATACGGGGTCAGGTCAAAGGAACACTaGGGTGGAGGGTTGGGATTGCTGTCCCCACCACCC +
Preference number: 6 (lower is better)
Translates to: SAVLYGVRSKEH*GGGLGLLSPPP
Trigger: GGGTGGTGGGGACAGCAATCCCAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCGTATAAGACGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000545946.1
ENST00000683879.1
CDS CAA 72 bp GGCCACTGCTGCCGCTGCTGCTGCTGCCTGCACCTGTaGCTGAAGATCAGGCGGGTTGTGTTTGCGCATATG +
Preference number: 6 (lower is better)
Translates to: GHCCRCCCCLHL*LKIRRVVFAHM
Trigger: CATATGCGCAAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS CCA 72 bp AGTCCTGTAGACGGCACAGGGACCACCGTGATATTCTaGGTAACGGACGCTTGGCTGTGTGGGGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPVDGTGTTVIF*VTDAWLCGVSW
Trigger: CCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGCCGTCTACAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CCA 72 bp CGCCTCCTTCCTCGGTTAGGGTCGATGCTACCTTCTTaGAGAGGTCAGGGACAACCTGCAGGGCTTGTGAGC +
Preference number: 6 (lower is better)
Translates to: RLLPRLGSMLPS*RGQGQPAGLVS
Trigger: GCTCACAAGCCCTGCAGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGACCCTAACCGAGGAAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000540915.5
ENST00000542519.1
ENST00000683879.1
CDS CCA 72 bp GCAGGCAACATGGTCTTAGGGTTCACGGCCAGGTGGTaGGGTAAACCAAGAGCAGCCTTACCGGGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: AGNMVLGFTARW*GKPRAALPGVL
Trigger: CAGCACACCCGGTAAGGCTGCTCTTGGTTTACCCCACCACCTGGCCGTGAACCCTAAGACCATGTTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542519.1
CDS CCA 72 bp GGTGCAGGCAACATGGTCTTAGGGTTCACGGCCAGGTaGTGGGGTAAACCAAGAGCAGCCTTACCGGGTGTG +
Preference number: 6 (lower is better)
Translates to: GAGNMVLGFTAR*WGKPRAALPGV
Trigger: CACACCCGGTAAGGCTGCTCTTGGTTTACCCCACCACCTGGCCGTGAACCCTAAGACCATGTTGCCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542519.1
CDS TCA 72 bp CACTGCTGCCGCTGCTGCTGCTGCCTGCACCTGTTGTaGTGTGTATGCCCGACTGCAGATAGTGCAGGTGTA +
Preference number: 6 (lower is better)
Translates to: HCCRCCCCLHLL*CVCPTADSAGV
Trigger: TACACCTGCACTATCTGCAGTCGGGCATACACATCACAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545946.1
CDS CCA 72 bp CCTTGTGCCAAGAAGTACCTCCCTCAGCCTGCACCGTaGTCTATCTACTGGAGACCCCAGCTGTCCCCTCAA +
Preference number: 6 (lower is better)
Translates to: PCAKKYLPQPAP*SIYWRPQLSPQ
Trigger: TTGAGGGGACAGCTGGGGTCTCCAGTAGATAGACCACGGTGCAGGCTGAGGGAGGTACTTCTTGGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542351.5
CDS CCA 72 bp ACAGGGACCACCGTGATATTCTGGGTAACGGACGCTTaGCTGTGTGGGGTCAGCTGGTCTGACTTGGACTCT +
Preference number: 6 (lower is better)
Translates to: TGTTVIFWVTDA*LCGVSWSDLDS
Trigger: AGAGTCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CCA 72 bp GGGCTTGTGAGCCAGGGGGAAGAGCTGAGACAATCATaGGAGCCGAAATGGGGAAGGTCTGAGCTGATGATG +
Preference number: 6 (lower is better)
Translates to: GLVSQGEELRQS*EPKWGRSELMM
Trigger: CATCATCAGCTCAGACCTTCCCCATTTCGGCTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000540915.5
ENST00000542519.1
ENST00000683879.1
CDS CCA 72 bp AAGACACCAGGACTACTTCTTCCTCTTCCCAGTGGGTaGCAGCACGGATCTCTAAGAGCTGGCCAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: KTPGLLLPLPSG*QHGSLRAGQVL
Trigger: GAGCACCTGGCCAGCTCTTAGAGATCCGTGCTGCCACCCACTGGGAAGAGGAAGAAGTAGTCCTGGTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS CCA 72 bp CACCAGCGTTTGGGTTTCACTCCTAGGCTCAGAGACTaGTCCTTGTTCGTTCCCAGGCCACAGGTAACCAGG +
Preference number: 6 (lower is better)
Translates to: HQRLGFTPRLRD*SLFVPRPQVTR
Trigger: CCTGGTTACCTGTGGCCTGGGAACGAACAAGGACCAGTCTCTGAGCCTAGGAGTGAAACCCAAACGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535485.5
ENST00000540915.5
CDS CAA 72 bp CGTTTGGGTTTCACTCCTAGGCTCAGAGACTGGTCCTaGTTCGTTCCCAGGCCACAGGTAACCAGGGGTCAG +
Preference number: 6 (lower is better)
Translates to: RLGFTPRLRDWS*FVPRPQVTRGQ
Trigger: CTGACCCCTGGTTACCTGTGGCCTGGGAACGAACAAGGACCAGTCTCTGAGCCTAGGAGTGAAACCCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535485.5
ENST00000540915.5
CDS CAA 90 bp CAGCTCCCCGACGTAGCTCTTGCCCCAGAGAAGCTCTGTGTCCACTaGAATCTCCAGTGTTGTTTGGTCTTCCTTCTCCCAGATGCCAGC +
Preference number: 6 (lower is better)
Translates to: QLPDVALAPEKLCVH*NLQCCLVFLLPDAS
Trigger: GCTGGCATCTGGGAGAAGGAAGACCAAACAACACTGGAGATTCAAGTGGACACAGAGCTTCTCTGGGGCAAGAGCTACGTCGGGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537383.1
CDS TCA 72 bp ACAGCAAATTCGTGGTGGAGCCGGGAACTGAATCCATaGGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: TANSWWSRELNP*AQGSVHFLCRS
Trigger: ACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAATTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417772.7
ENST00000683879.1
CDS TCA 72 bp ATGATGCTGTGGTCACAAGAGAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCAGCAGTCATCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: MMLWSQESLRGT*LPNPDQQSSVL
Trigger: CAGGACTGATGACTGCTGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCTCTCTTGTGACCACAGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436774.6
ENST00000535485.5
CDS CCA 72 bp TTCTGGGTAACGGACGCTTGGCTGTGTGGGGTCAGCTaGTCTGACTTGGACTCTGTGTCCATACTGATGCCT +
Preference number: 6 (lower is better)
Translates to: FWVTDAWLCGVS*SDLDSVSILMP
Trigger: AGGCATCAGTATGGACACAGAGTCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000436774.6
ENST00000535485.5
ENST00000537248.5
ENST00000538829.5
ENST00000540915.5
ENST00000542351.5
ENST00000544482.1
ENST00000683879.1
CDS CAA 90 bp AGCTCTTGCCCCAGAGAAGCTCTGTGTCCACTTGAATCTCCAGTGTaGTTTGGTCTTCCTTCTCCCAGATGCCAGCCAGGTCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSCPREALCPLESPV*FGLPSPRCQPGLSS
Trigger: GGAGGAGAGACCTGGCTGGCATCTGGGAGAAGGAAGACCAAACAACACTGGAGATTCAAGTGGACACAGAGCTTCTCTGGGGCAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537383.1
CDS TCA 72 bp ATGATGCTGTGGTCACAAGAGAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCCCTTGATTGACTCCCTT +
Preference number: 6 (lower is better)
Translates to: MMLWSQESLRGT*LPNPDPLIDSL
Trigger: AAGGGAGTCAATCAAGGGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCTCTCTTGTGACCACAGCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319770.7
ENST00000361959.7
ENST00000396801.7
ENST00000417772.7
ENST00000540915.5
ENST00000683879.1
CDS TCA 72 bp CTGCATCCGTGTACGCCCGATGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGTGTTGCCGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LHPCTPDDSCGT*RVYLCCVAVCG
Trigger: CCCACAGACGGCAACACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCATCGGGCGTACACGGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319770.7
ENST00000355772.8
ENST00000361959.7
ENST00000396801.7
ENST00000683879.1
CDS CAA 90 bp TATCACCAGCGTTTGGGTTTCACTCCTAGGCTCAGAGACTGGTCCTaGTTCGTTCCCAGGCCACAGGTAACCAGGGGTCAGAGAACATTA +
Preference number: 6 (lower is better)
Translates to: YHQRLGFTPRLRDWS*FVPRPQVTRGQRTL
Trigger: TAATGTTCTCTGACCCCTGGTTACCTGTGGCCTGGGAACGAACAAGGACCAGTCTCTGAGCCTAGGAGTGAAACCCAAACGCTGGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535485.5
ENST00000540915.5
CDS TCA 72 bp TGGAGAGAGCAAGAAAGCAACACCACTTACCTGACCTaGGACTGTGGGGATAGAAGGCCAGAAGTACGGGTT +
Preference number: 6 (lower is better)
Translates to: WREQESNTTYLT*DCGDRRPEVRV
Trigger: AACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGGTAAGTGGTGTTGCTTTCTTGCTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS TCA 72 bp ATGATGCTGTGGTCACAAGAGAGCCTGAGGGGGACGTaGTTACCAAACCCGGACCTAGGATTGGGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: MMLWSQESLRGT*LPNPDLGLGEK
Trigger: TTTTTCTCCCAATCCTAGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCTCTCTTGTGACCACAGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542519.1
CDS TCA 72 bp CACACTTCAGTGTCTGTCCTCCTTAGGGATCAAGGATaGGCACTTCATACCTCTGGCCTTCTAGAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: HTSVSVLLRDQG*ALHTSGLLERS
Trigger: GCTTCTCTCTAGAAGGCCAGAGGTATGAAGTGCTCATCCTTGATCCCTAAGGAGGACAGACACTGAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542605.1
CDS TCA 72 bp GGGATAGAAGGCCAGAAGTACGGGTTAGAATTGAAGTaGGATTCTTCCATTCCTCTCTCTCTCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: GIEGQKYGLELK*DSSIPLSLFLL
Trigger: CAGGAGGAAGAGAGAGAGAGGAATGGAAGAATCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542351.5
CDS CCA 72 bp TTCCCAGAAACTAAGACGAATTCTATCACCAGCGTTTaGGTTTCACTCCTAGGCTCAGAGACTGGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: FPETKTNSITSV*VSLLGSETGPC
Trigger: ACAAGGACCAGTCTCTGAGCCTAGGAGTGAAACCCAAACGCTGGTGATAGAATTCGTCTTAGTTTCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535485.5
ENST00000540915.5
CDS CCA 72 bp AAGTTGTTTCTACTCCAGGTACGTGTCTGTCTCCCATaGATCAGTGAATATCATATAGTCACTGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: KLFLLQVRVCLP*ISEYHIVTAAP
Trigger: GGGAGCTGCAGTGACTATATGATATTCACTGATCCATGGGAGACAGACACGTACCTGGAGTAGAAACAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537383.1