RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF382 (Homo sapiens)

Ensembl gene IDs: ENSG00000161298

Ensembl transcript IDs: ENST00000292928.7, ENST00000423582.5, ENST00000435416.1, ENST00000439428.5, ENST00000460384.1, ENST00000460670.5, ENST00000463910.1, ENST00000590785.1

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTGGCCAGGAATTTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTaGGGTCTCATTTGTGGTACCAGTTGGGTGTTAGCAGGGTCCACA +
Preference number: 1 (lower is better)
Translates to: CWPGIWEGLSWAVLA*GLICGTSWVLAGST
Trigger: TGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAAATTCCTGGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTaGTACCAGTTGGGTGTTAGCAGGGTCCACAGTCATCTGAAGGCT +
Preference number: 1 (lower is better)
Translates to: LGRPQLGSSCLRSHL*YQLGVSRVHSHLKA
Trigger: AGCCTTCAGATGACTGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp TGGTACCAGTTGGGTGTTAGCAGGGTCCACAGTCATCTGAAGGCTTaGCTGGATGTCCAAGAGGCCTCACTTACATGGTTGGCAGCTGAT +
Preference number: 1 (lower is better)
Translates to: WYQLGVSRVHSHLKA*LDVQEASLTWLAAD
Trigger: ATCAGCTGCCAACCATGTAAGTGAGGCCTCTTGGACATCCAGTCAAGCCTTCAGATGACTGTGGACCCTGCTAACACCCAACTGGTACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR GCA 90 bp ATTTTGTTGGCCAGGAATTTGGGAAGGCCTCAGCTGGGCAGTTCTTaGTTGAGGTCTCATTTGTGGTACCAGTTGGGTGTTAGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: ILLARNLGRPQLGSS*LRSHLWYQLGVSRV
Trigger: GACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAAATTCCTGGCCAACAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp GGTTGGGATAAGGCCAGTGAGCTATACAAGGTACTAGTTAAAGTCTaGTATTCCCTGGGAGACTCCCAGAGCCAATTTGTTTATGATGGC +
Preference number: 1 (lower is better)
Translates to: GWDKASELYKVLVKV*YSLGDSQSQFVYDG
Trigger: GCCATCATAAACAAATTGGCTCTGGGAGTCTCCCAGGGAATATCAGACTTTAACTAGTACCTTGTATAGCTCACTGGCCTTATCCCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp ATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCATACCTTaGTTTCTCTCTGCGCCTTTGTTGAGAAATGACAGCACGGGGTCT +
Preference number: 1 (lower is better)
Translates to: IQKYLLHGHSLDSIP*FLSAPLLRNDSTGS
Trigger: AGACCCCGTGCTGTCATTTCTCAACAAAGGCGCAGAGAGAAATCAAGGTATGGAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp TACCATCTCGGTTTGTATCAGCACTCTGTGATGCTTGCACGATCATaGCACTGCCTCATGATGCATTTCTCAGAATGTATCCCTATTAAG +
Preference number: 1 (lower is better)
Translates to: YHLGLYQHSVMLARS*HCLMMHFSECIPIK
Trigger: CTTAATAGGGATACATTCTGAGAAATGCATCATGAGGCAGTGTCATGATCGTGCAAGCATCACAGAGTGCTGATACAAACCGAGATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp GACCAGAAACTGAGTGGAGAAATTCAAGCATTAGCTGACAAGAAATaGTCACATTTGAGATGTACTGTGCACTATCTGATACTGGGGACA +
Preference number: 1 (lower is better)
Translates to: DQKLSGEIQALADKK*SHLRCTVHYLILGT
Trigger: TGTCCCCAGTATCAGATAGTGCACAGTACATCTCAAATGTGATCATTTCTTGTCAGCTAATGCTTGAATTTCTCCACTCAGTTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 90 bp AGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTaGTTTACAGTCAGACTGCAAAGCTCTAAAATTATCTCCACGATG +
Preference number: 1 (lower is better)
Translates to: RKYTAVIGTMFIRWS*FTVRLQSSKIISTM
Trigger: CATCGTGGAGATAATTTTAGAGCTTTGCAGTCTGACTGTAAATCAGCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp AATTTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTaGTGGTACCAGTTGGGTGTTAGCAGGGTCCACAGTCATCTGAAG +
Preference number: 2 (lower is better)
Translates to: NLGRPQLGSSCLRSH*WYQLGVSRVHSHLK
Trigger: CTTCAGATGACTGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAAGGCAGAGGCTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: MASLALLLDQKLSGEIQARQRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAGCCTCTGCCT...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp AACATCCCAGGTGCATGTTGTAGACTAGTGTTGGAGCCTGTGCTTTaGCTGTTGCACATTACTTGTGAAGCAGGACATGGCAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: NIPGACCRLVLEPVL*LLHITCEAGHGKPG
Trigger: GCCAGGCTTGCCATGTCCTGCTTCACAAGTAATGTGCAACAGCAAAAGCACAGGCTCCAACACTAGTCTACAACATGCACCTGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAGGGTCCACAGTCATCTaGAGGCTTGACTGGATGTCC +
Preference number: 2 (lower is better)
Translates to: MASLALLLDQKLSGEIQAGSTVI*RLDWMS
Trigger: GGACATCCAGTCAAGCCTTCAGATGACTGTGGACCC...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCATGTTGGCCAGGAATTTaGGAAGGCCTCAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: MASLALLLDQKLSGEIQACWPGI*EGLSWA
Trigger: TGCCCAGCTGAGGCCTTCCCAAATTCCTGGCCAACA...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp CCAGGTGCATGTTGTAGACTAGTGTTGGAGCCTGTGCTTTTGCTGTaGCACATTACTTGTGAAGCAGGACATGGCAAGCCTGGCTCTATT +
Preference number: 2 (lower is better)
Translates to: PGACCRLVLEPVLLL*HITCEAGHGKPGSI
Trigger: AATAGAGCCAGGCTTGCCATGTCCTGCTTCACAAGTAATGTGCAACAGCAAAAGCACAGGCTCCAACACTAGTCTACAACATGCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACCGAAATTGCGCCATTaGACTCCAGCCTGGGAAACA +
Preference number: 2 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTPKLRH*TPAWET
Trigger: TGTTTCCCAGGCTGGAGTGCAATGGCGCAATTTCGG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp TGTTGCACATTACTTGTGAAGCAGGACATGGCAAGCCTGGCTCTATaGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCATTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: CCTLLVKQDMASLAL*LDQKLSGEIQALAD
Trigger: GTCAGCTAATGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCATGTCCTGCTTCACAAGTAATGTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACTGCCAGTATCTGACTaGATACACACATGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTLPVSD*IHTCSK
Trigger: CTTAGAGCATGTGTGTATTCAGTCAGATACTGGCAG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACAACACCTCCCAAAGTaGTGGGATTACAGAAATGAG +
Preference number: 2 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTQHLPK*WDYRNE
Trigger: CTCATTTCTGTAATCCCAGCACTTTGGGAGGTGTTG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACATGACACTGCCTCATaGTGCATTTCTCAGAATGTA +
Preference number: 2 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTHDTAS*CISQNV
Trigger: TACATTCTGAGAAATGCATCATGAGGCAGTGTCATG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 2 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR GCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 2 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTGTGTTTTACAGGCTaGCAAACAGTAGGTTACCAT +
Preference number: 2 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTVCFTG*QTVGYH
Trigger: ATGGTAACCTACTGTTTGCCAGCCTGTAAAACACAC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR GCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 2 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR GCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCCAGCTGGGCAGTTCTTaGTTGAGGTCTCATTTGTGG +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSQLGSS*LRSHLW
Trigger: CCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTG...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACCCAATGCTGTTTCATaGCAAAATATAAACCACAGG +
Preference number: 2 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTPNAVS*QNINHR
Trigger: CCTGTGGTTTATATTTTGGCATGAAACAGCATTGGG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCCCTCACTTACATGGTTaGCAGCTGATGCTAGCTGAT +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSPHLHG*QLMLAD
Trigger: ATCAGCTAGCATCAGCTGCCAACCATGTAAGTGAGG...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp CATTTGAGGTTCATCTATGTAGCTGCATGTTTCAGTAGCTCATTATaGTTATCGTTGAGTAGAATTCCATCTTGGGAATGTACCACAGTG +
Preference number: 2 (lower is better)
Translates to: HLRFIYVAACFSSSL*LSLSRIPSWECTTV
Trigger: CACTGTGGTACATTCCCAAGATGGAATTCTACTCAACGATAACAATAATGAGCTACTGAAACATGCAGCTACATAGATGAACCTCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCAGTTTCCCTGCAGCATaGATTCTCTGGTTTGAACCA +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSSFPAA*ILWFEP
Trigger: TGGTTCAAACCAGAGAATTCATGCTGCAGGGAAACT...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCCTTCAAGCAGGATTCTaGAATACAGCCCAATGCTGT +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSLQAGF*NTAQCC
Trigger: ACAGCATTGGGCTGTATTCCAGAATCCTGCTTGAAG...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 90 bp ATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTACATTaGCCTGGAAGATTTGGGCTGTGGCTAAATGTTTTTCTACATATA +
Preference number: 2 (lower is better)
Translates to: IRHLLWLTAMSRLLH*PGRFGLWLNVFLHI
Trigger: TATATGTAGAAAAACATTTAGCCACAGCCCAAATCTTCCAGGCAAATGTAATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR TCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTTAGATTCCATACCTTaGTTTCTCTCTGCGCCTTTG +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSLDSIP*FLSAPL
Trigger: CAAAGGCGCAGAGAGAAATCAAGGTATGGAATCTAA...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 2 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR CCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTTTGCCTGGAAGATTTaGGCTGTGGCTAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSFAWKI*AVAKCF
Trigger: AAAACATTTAGCCACAGCCCAAATCTTCCAGGCAAA...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR GCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCAACTCATTTTGCATATaGCTTATGACCTTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSNSFCI*LMTLQL
Trigger: TAACTGCAAGGTCATAAGGCATATGCAAAATGAGTT...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCGAGAAAGAATATATATaGACCCCTCAATTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFEKEYI*TPQLSC
Trigger: ACAACTCAATTGAGGGGTCCATATATATTCTTTCTC...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp CTTGACTGGATGTCCAAGAGGCCTCACTTACATGGTTaGCAGCTGATGCTAGCTGATGGCTGGGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: LDWMSKRPHLHG*QLMLADGWELS
Trigger: GCTGAGCTCCCAGCCATCAGCTAGCATCAGCTGCCAACCATGTAAGTGAGGCCTCTTGGACATCCAGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp GGTACCAGTTGGGTGTTAGCAGGGTCCACAGTCATCTaGAGGCTTGACTGGATGTCCAAGAGGCCTCACTTA +
Preference number: 3 (lower is better)
Translates to: GTSWVLAGSTVI*RLDWMSKRPHL
Trigger: TAAGTGAGGCCTCTTGGACATCCAGTCAAGCCTTCAGATGACTGTGGACCCTGCTAACACCCAACTGGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR GCA 72 bp GCCAGGAATTTGGGAAGGCCTCAGCTGGGCAGTTCTTaGTTGAGGTCTCATTTGTGGTACCAGTTGGGTGTT +
Preference number: 3 (lower is better)
Translates to: ARNLGRPQLGSS*LRSHLWYQLGV
Trigger: AACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAAATTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp CCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTaGTACCAGTTGGGTGTTAGCAGGGTCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: PQLGSSCLRSHL*YQLGVSRVHSH
Trigger: ATGACTGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCATGGCAGGAGACTTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: MASLALLLDQKLSGEIQAWQETC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAAGTCTCCTGCCA...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp TTGGGTGTTAGCAGGGTCCACAGTCATCTGAAGGCTTaGCTGGATGTCCAAGAGGCCTCACTTACATGGTTG +
Preference number: 3 (lower is better)
Translates to: LGVSRVHSHLKA*LDVQEASLTWL
Trigger: CAACCATGTAAGTGAGGCCTCTTGGACATCCAGTCAAGCCTTCAGATGACTGTGGACCCTGCTAACACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp GGAATTTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTaGGGTCTCATTTGTGGTACCAGTTGGGTGTTAGCA +
Preference number: 3 (lower is better)
Translates to: GIWEGLSWAVLA*GLICGTSWVLA
Trigger: TGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp TCCACGATGCCCAGATGTCTGGCTCTGACTCTTGGTTaGGATAAGGCCAGTGAGCTATACAAGGTACTAGTT +
Preference number: 3 (lower is better)
Translates to: STMPRCLALTLG*DKASELYKVLV
Trigger: AACTAGTACCTTGTATAGCTCACTGGCCTTATCCCAACCAAGAGTCAGAGCCAGACATCTGGGCATCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAAGCCTGATGATTTTGTaGGCCAGGAATTTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: MASLALLLDQKLSGEIQASLMIL*ARNLGR
Trigger: CCTTCCCAAATTCCTGGCCAACAAAATCATCAGGCT...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAACAGCACGGGGTCTTTaGAGGATAGATCGCATTATC +
Preference number: 3 (lower is better)
Translates to: MASLALLLDQKLSGEIQATARGL*RIDRII
Trigger: GATAATGCGATCTATCCTCAAAAGACCCCGTGCTGT...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp CTAAAATTATCTCCACGATGCCCAGATGTCTGGCTCTaGCTCTTGGTTGGGATAAGGCCAGTGAGCTATACA +
Preference number: 3 (lower is better)
Translates to: LKLSPRCPDVWL*LLVGIRPVSYT
Trigger: TGTATAGCTCACTGGCCTTATCCCAACCAAGAGTCAGAGCCAGACATCTGGGCATCGTGGAGATAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR GCA 72 bp GTACCATCTCGGTTTGTATCAGCACTCTGTGATGCTTaGACGATCATGACACTGCCTCATGATGCATTTCTC +
Preference number: 3 (lower is better)
Translates to: VPSRFVSALCDA*TIMTLPHDAFL
Trigger: GAGAAATGCATCATGAGGCAGTGTCATGATCGTGCAAGCATCACAGAGTGCTGATACAAACCGAGATGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp GTGGTGAAAGTTCTGAATTGTCTGCCAGTATCTGACTaGATACACACATGCTCTAAGACCCAGCGATTCCAC +
Preference number: 3 (lower is better)
Translates to: VVKVLNCLPVSD*IHTCSKTQRFH
Trigger: GTGGAATCGCTGGGTCTTAGAGCATGTGTGTATTCAGTCAGATACTGGCAGACAATTCAGAACTTTCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
3UTR TCA 72 bp GGTTTGTATCAGCACTCTGTGATGCTTGCACGATCATaGCACTGCCTCATGATGCATTTCTCAGAATGTATC +
Preference number: 3 (lower is better)
Translates to: GLYQHSVMLARS*HCLMMHFSECI
Trigger: GATACATTCTGAGAAATGCATCATGAGGCAGTGTCATGATCGTGCAAGCATCACAGAGTGCTGATACAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp GTGGGATTGCTGGGTCATATTGGATGTGTAACTTTTTaGGACTGGCATATTGTTTTCCAGACCGGCTTTACC +
Preference number: 3 (lower is better)
Translates to: VGLLGHIGCVTF*DWHIVFQTGFT
Trigger: GGTAAAGCCGGTCTGGAAAACAATATGCCAGTCTCAAAAAGTTACACATCCAATATGACCCAGCAATCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp CCTACACATAGACTTCCTAGCATTATGGTCTCGGTATaGCTAGACTTCTTTCATGAAAGAGAGCTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: PTHRLPSIMVSV*LDFFHERELSP
Trigger: TGGGGAAAGCTCTCTTTCATGAAAGAAGTCTAGCCATACCGAGACCATAATGCTAGGAAGTCTATGTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR TCA 72 bp TACCTCCTTCACGGACATTCATTAGATTCCATACCTTaGTTTCTCTCTGCGCCTTTGTTGAGAAATGACAGC +
Preference number: 3 (lower is better)
Translates to: YLLHGHSLDSIP*FLSAPLLRNDS
Trigger: GCTGTCATTTCTCAACAAAGGCGCAGAGAGAAATCAAGGTATGGAATCTAATGAATGTCCGTGAAGGAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp GTGGCTAACGGCAATGTCACGTTTATTACATTTGCCTaGAAGATTTGGGCTGTGGCTAAATGTTTTTCTACA +
Preference number: 3 (lower is better)
Translates to: VANGNVTFITFA*KIWAVAKCFST
Trigger: TGTAGAAAAACATTTAGCCACAGCCCAAATCTTCCAGGCAAATGTAATAAACGTGACATTGCCGTTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATGTTGGATATTACGCTaGCAAGCAACATCATCTACA +
Preference number: 3 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTCWILR*QATSST
Trigger: TGTAGATGATGTTGCTTGCAAGCGTAATATCCAACA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR CAA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTTTCTCTCTGCGCCTTaGTTGAGAAATGACAGCACG +
Preference number: 3 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSFLSAP*LRNDST
Trigger: CGTGCTGTCATTTCTCAACAAAGGCGCAGAGAGAAA...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp AAAGAGTTCCAGTTGTTCCACATTCTTGTCAGCACTTaGTATTGTCACATATCTAGGGTTTTGAAAAGTCCG +
Preference number: 3 (lower is better)
Translates to: KEFQLFHILVST*YCHISRVLKSP
Trigger: CGGACTTTTCAAAACCCTAGATATGTGACAATACCAAGTGCTGACAAGAATGTGGAACAACTGGAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTGTTGGATATTACGCTaGCAAGCAACATCATCTACA +
Preference number: 3 (lower is better)
Translates to: LSNNICVCVCVCVCVLQACWILR*QATSST
Trigger: TGTAGATGATGTTGCTTGCAAGCGTAATATCCAACA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
3UTR-3UTR CAA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCAAAAGCCTGATGATTTaGTTGGCCAGGAATTTGGGA +
Preference number: 3 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFKSLMI*LARNLG
Trigger: TCCCAAATTCCTGGCCAACAAAATCATCAGGCTTTT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACTGTTGGATATTACGCTaGCAAGCAACATCATCTACA +
Preference number: 3 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDCWILR*QATSST
Trigger: TGTAGATGATGTTGCTTGCAAGCGTAATATCCAACA...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
3UTR TCA 72 bp ACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTaGTTTACAGTCAGACTGCAAAGCTCTAAAATTATC +
Preference number: 3 (lower is better)
Translates to: TAVIGTMFIRWS*FTVRLQSSKII
Trigger: GATAATTTTAGAGCTTTGCAGTCTGACTGTAAATCAGCTCCATCTTATAAACATGGTTCCTATAACTGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp TCTGATTTCTTCAAAAGAAATCTTCAAGCAGGATTCTaGAATACAGCCCAATGCTGTTTCATGCCAAAATAT +
Preference number: 3 (lower is better)
Translates to: SDFFKRNLQAGF*NTAQCCFMPKY
Trigger: ATATTTTGGCATGAAACAGCATTGGGCTGTATTCCAGAATCCTGCTTGAAGATTTCTTTTGAAGAAATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CCA 72 bp ATAAATGGAATCATACAGTATGTAACTTTTTGGGACTaGGTTCTTTCCTTTAGCGTAATGCATTTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: INGIIQYVTFWD*VLSFSVMHLRF
Trigger: GAACCTCAAATGCATTACGCTAAAGGAAAGAACCCAGTCCCAAAAAGTTACATACTGTATGATTCCATTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAGCCCGGGACAGCCCTaGCTGTCCCCGATTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSPGQP*LSPIGP
Trigger: GGGCCCAATCGGGGACAGTCAGGGCTGTCCCGGGCT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
3UTR CAA 72 bp AGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTaGTGGTACCAGTTGGGTGTTAGCAGGGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: RPQLGSSCLRSH*WYQLGVSRVHS
Trigger: ACTGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGATGCTAGCTGATGGCTaGGAGCTCAGCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQMLADG*ELSCSC
Trigger: ACAGCTACAGCTGAGCTCCCAGCCATCAGCTAGCAT...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGGCGGGTGGATCGCCTaGGGTCAGGCTTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTGGWIA*GQALET
Trigger: GGTCTCCAAAGCCTGACCTCAGGCGATCCACCCGCC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGCTATCCTGGCTCACTaGAACCTCCGCCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTAILAH*NLRLPG
Trigger: GCCCGGGAGGCGGAGGTTGCAGTGAGCCAGGATAGC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCACTGGGAGGCGGAGGTTaGAGTGGGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQALGGGG*SGLRLH
Trigger: GTGCAATCTCAGCCCACTGCAACCTCCGCCTCCCAG...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGCAGCTGATGCTAGCTaGTGGCTGGGAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWAADAS*WLGAQL
Trigger: CAGCTGAGCTCCCAGCCATCAGCTAGCATCAGCTGC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGGCAGGAGACTTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPGRRLA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAAGTCTCCTGCC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGTGTGGTGAGTTGAGGTaGCCCGGGTCTGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWCGELR*PGSGCE
Trigger: CTCGCATCCAGACCCGGGTCACCTCAACTCACCACA...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCCGCGCGGTGCTAGCTaGCGGCGCTCCCCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSPRGAS*RRSPPF
Trigger: AAACGGAGGGGAGCGCCGGCAGCTAGCACCGCGCGG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGCAGTGGTGCTATCCTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWAVVLS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAGGATAGCACCACTGC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCGCGGAGAGGGTTTGTaGAGGCAGAAGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWRGEGL*RQKPQA
Trigger: GGCCTGGGGCTTCTGCCTCCACAAACCCTCTCCGCG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGGGGACCTGGGTTCATaGGACGCGGAGAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWGDLGS*DAERVC
Trigger: ACAAACCCTCTCCGCGTCCCATGAACCCAGGTCCCC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGAGGTGACCCGGGTCTaGATGCGAGAAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPEVTRV*MREELT
Trigger: CGTGAGCTCTTCTCGCATCCAGACCCGGGTCACCTC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAGAAACAGTCCTCCCTaGCCTCCCCACCCGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTRNSPP*PPHPVP
Trigger: CGGAACCGGGTGGGGAGGCCAGGGAGGACTGTTTCT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
3UTR CAA 72 bp GGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGTaGGGTGTTAGCAGGGTCCACAGTCATCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GSSCLRSHLWYQ*GVSRVHSHLKA
Trigger: AGCCTTCAGATGACTGTGGACCCTGCTAACACCCAACTGGTACCACAAATGAGACCTCAAGCAAGAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGCTGCCAGTATCTGACTaGATACACACATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQLPVSD*IHTCSK
Trigger: CTTAGAGCATGTGTGTATTCAGTCAGATACTGGCAG...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTAGGCGGAGCTTACAGTaGGCCAAGATCGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPRRSLQ*AKIEPL
Trigger: CAGTGGCTCGATCTTGGCTCACTGTAAGCTCCGCCT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTCCAGGAGGCGGAGGTTaGAATGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPPGGGG*NEPRSH
Trigger: GTGTGATCTCGGCTCATTGCAACCTCCGCCTCCTGG...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGTTGAGGTCTCATTTGTaGTACCAGTTGGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQLRSHL*YQLGVS
Trigger: GCTAACACCCAACTGGTACCACAAATGAGACCTCAA...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGCTTCAAGCAGGATTCTaGAATACAGCCCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQLQAGF*NTAQCC
Trigger: ACAGCATTGGGCTGTATTCCAGAATCCTGCTTGAAG...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTCACGGCAGGGGACCTaGGTTCATGGGACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSRQGT*VHGTRR
Trigger: TCTCCGCGTCCCATGAACCCAGGTCCCCTGCCGTGA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGCTGGCACTACGCTTCTaGCAGGACCCCGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGLALRF*QDPGSL
Trigger: AAGGGAGCCGGGGTCCTGGCAGAAGCGTAGTGCCAG...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGCCACGGCCGCCCTATTaGGGCTGGCACTACGCTTCT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGPRPPY*GWHYAS
Trigger: AGAAGCGTAGTGCCAGCCGCAATAGGGCGGCCGTGG...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGCGCTCCCCTCCGTTTaGACCCACGGCCGCCCTATT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAALPSV*THGRPI
Trigger: AATAGGGCGGCCGTGGGTGCAAACGGAGGGGAGCGC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTTGCGTCCGTGTGTGGTaGTGTGAGTGGGCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSCVRVW*CEWARL
Trigger: CAGGCGCGCCCACTCACACCACCACACACGGACGCA...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
3UTR CAA 72 bp GGTGCATGTTGTAGACTAGTGTTGGAGCCTGTGCTTTaGCTGTTGCACATTACTTGTGAAGCAGGACATGGC +
Preference number: 4 (lower is better)
Translates to: GACCRLVLEPVL*LLHITCEAGHG
Trigger: GCCATGTCCTGCTTCACAAGTAATGTGCAACAGCAAAAGCACAGGCTCCAACACTAGTCTACAACATGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 72 bp CTTGTCAGCACTTGGTATTGTCACATATCTAGGGTTTaGAAAAGTCCGATTATAGGCCGGGTGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVSTWYCHISRV*KSPIIGRVRWL
Trigger: GAGCCACCGCACCCGGCCTATAATCGGACTTTTCAAAACCCTAGATATGTGACAATACCAAGTGCTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGGGTCCACAGTCATCTaGAGGCTTGACTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTGSTVI*RLDWMS
Trigger: GGACATCCAGTCAAGCCTTCAGATGACTGTGGACCC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATCGTTTTCCATGTGGTaGGTTGAGGTGACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSFSMW*VEVTRV
Trigger: GACCCGGGTCACCTCAACTCACCACATGGAAAACGA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGCACGTTTATTACATTTaGCTGGAAGATTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQHVYYI*LEDLGC
Trigger: ACAGCCCAAATCTTCCAGGCAAATGTAATAAACGTG...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTCCAAGATCGAGCCACTaGCTCCAGCCTGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAPRSSH*LQPGRQ
Trigger: CTGTCGCCCAGGCTGGAGGCAGTGGCTCGATCTTGG...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATGTGTGCAAGTCACCTaGTGGGGAGGGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTCVQVT*WGGRLC
Trigger: ACACAGTCTCCCTCCCCAGCAGGTGACTTGCACACA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGAACGGAGCTCCCAGTaGCCTCCTTGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAERSSQ*PPWPPQ
Trigger: CTGAGGAGGCCAAGGAGGGCACTGGGAGCTCCGTTC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTCCGCCCTATTGCGGCTaGCACTACGCTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAPPYCG*HYASAR
Trigger: CCTGGCAGAAGCGTAGTGCCAGCCGCAATAGGGCGG...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATCTCTGCGCCTTTGTTaGGAAATGACAGCACGGGGT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSLRLC*EMTARG
Trigger: ACCCCGTGCTGTCATTTCTCAACAAAGGCGCAGAGA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGAGGTGGGCGGATCATaGGGTCAGGAGATCGACACC +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAEVGGS*GQEIDT
Trigger: GGTGTCGATCTCCTGACCTCATGATCCGCCCACCTC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACAAAGCATAAATACCCATaGAGTGGCTGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTKHKYP*SGWARW
Trigger: CCACCGTGCCCAGCCACTGCATGGGTATTTATGCTT...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAATTTGTGGTACCAGTTaGGTGTTAGCAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQAICGTS*VLAGST
Trigger: TGTGGACCCTGCTAACACCCAACTGGTACCACAAAT...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTGTGTGCCGTTCTGTaGCTGCGTCCGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVCAVL*LRPCVV
Trigger: CACCACACACGGACGCAGCCACAGAACGGCACACAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATCAGGCTTAGCCATGTaGAACCCCACAGATACGAAG +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSGLAM*NPTDTK
Trigger: CTTCGTATCTGTGGGGTTTCACATGGCTAAGCCTGA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCCCGTATGTGTTTTGTaGTGTCTAGTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWPVCVL*CLVRVA
Trigger: GGCCACCCTCACTAGACATCACAAAACACATACGGG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAGTCATCTGAAGGCTTaGCTGGATGTCCAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSHLKA*LDVQEA
Trigger: GGCCTCTTGGACATCCAGTCAAGCCTTCAGATGACT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCATTCCCTTTCTTTTGCTaGGCCACATCCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQAFPFFC*ATSFAS
Trigger: AGAAGCAAAGGATGTGGCTCAGCAAAAGAAAGGGAA...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGGGAGGGAGACTGTGTaGTTGTGTTTGTGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSGRETV*LCLCVP
Trigger: CGGCACACACAAACACAATCACACAGTCTCCCTCCC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATTCCATGTGGTGAGTTaGGGTGACCCGGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSFHVVS*GDPGLD
Trigger: ATCCAGACCCGGGTCACCTCAACTCACCACATGGAA...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATCAGGCTTAGCCATGTaGAACCCTGAGACATGGCTT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSGLAM*NPETWL
Trigger: AAGCCATGTCTCAGGGTTTCACATGGCTAAGCCTGA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGAAGTGTCAGCGGGCTaGCAGAGGACAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAEVSAG*QRTTAP
Trigger: AGGAGCAGTTGTCCTCTGTCAGCCCGCTGACACTTC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTAGTGAGCCAAGATCATaGCACTGCACTCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQASEPRS*HCTPAW
Trigger: CCAGGCGGGAGTGCAGTGGCATGATCTTGGCTCACT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCCGAGATCACACCACTaGACACCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFPRSHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGTGTGCAGTGGTGTGATCTCGG...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGTTCTATAAACATGTTTaGTCCTTAGAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQFYKHV*SLELPK
Trigger: TTTGGGCAACTCTAAGGAGCAAACATGTTTATAGAA...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCACATGTAGAGAAGTTCTaGTGTCAGCTCTCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQAHVEKF*CQLSPN
Trigger: ATTTGGGGAGAGCTGACAGCAGAACTTCTCTACATG...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGTGAGGGTTGTCTTCTaGATAAATGCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWVRVVF*INAFPH
Trigger: GTGTGGGAAGGCATTTATCCAGAAGACAACCCTCAC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGTGTTGGCCAGGAATTTaGGAAGGCCTCAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGCWPGI*EGLSWA
Trigger: TGCCCAGCTGAGGCCTTCCCAAATTCCTGGCCAACA...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATACTTAGGGAGGCTGTaGCAGGAGACTTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTYLGRL*QETCLN
Trigger: GTTCAAGCAAGTCTCCTGCCACAGCCTCCCTAAGTA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGACAGAGGTCTAGAGTaGAGAGGGGTATTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPDRGLE*RGVFES
Trigger: ACTCTCAAATACCCCTCTCCACTCTAGACCTCTGTC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
3UTR CAA 72 bp TTACTTGTGAAGCAGGACATGGCAAGCCTGGCTCTATaGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LLVKQDMASLAL*LDQKLSGEIQA
Trigger: TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCATGTCCTGCTTCACAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTCTTGGTATTGAGGAGTaGTTTCTCCCATCCAGTACT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPLGIEE*FLPSST
Trigger: AGTACTGGATGGGAGAAATCACTCCTCAATACCAAG...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAGCTCCTGTTTACCACTaGGAACTCTTTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQAAPVYH*ELFLFV
Trigger: AACAAACAGAAAGAGTTCTCAGTGGTAAACAGGAGC...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTATATGTGTTTTCTCATaGAGGGTGAGGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPICVFS*RVRAVF
Trigger: GAAGACAGCCCTCACCCTTCATGAGAAAACACATAT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGCCCGTATGTGTTTTGTaGTGTCTAGTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGPVCVL*CLVRVA
Trigger: GGCCACCCTCACTAGACATCACAAAACACATACGGG...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGAGCCACATTACTTACTaGATTCCCGTGGTTTCTACC +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWSHITY*IPVVST
Trigger: GGTAGAAACCACGGGAATTCAGTAAGTAATGTGGCT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGAGTTTCCCTGCAGCATaGATTCTCTGGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWSFPAA*ILWFEP
Trigger: TGGTTCAAACCAGAGAATTCATGCTGCAGGGAAACT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACACTCCTGGGCTCAAGTaGTCCTCCCAACACCTCCCA +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDTPGLK*SSQHLP
Trigger: TGGGAGGTGTTGGGAGGATCACTTGAGCCCAGGAGT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGTACTGTGCACTATCTaGTACTGGGGACACAGAGGG +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGVLCTI*YWGHRG
Trigger: CCCTCTGTGTCCCCAGTATCAGATAGTGCACAGTAC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGGCTCCCTTTTCCGTTaGCCTGGTGTTCGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSGSLFR*PGVRFP
Trigger: TGGAAAACGAACACCAGGTCAACGGAAAAGGGAGCC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR GCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCTGTGGCAGGAGACTTaGTTGAACCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFLWQET*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAAGTCTCCTGCCACAG...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGTCAAATGGTTGCTCTaGAGCTTGAACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWVKWLL*SLNLLM
Trigger: CATCAGAAGGTTCAAGCTCCAGAGCAACCATTTGAC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTGAGGGTTGTCTTCTaGATAAATGCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTVRVVF*INAFPH
Trigger: GTGTGGGAAGGCATTTATCCAGAAGACAACCCTCAC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACACCTCACTTACATGGTTaGCAGCTGATGCTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTPHLHG*QLMLAD
Trigger: ATCAGCTAGCATCAGCTGCCAACCATGTAAGTGAGG...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAAGTCTGATATTCCCTaGGAGACTCCCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTKSDIP*ETPRAN
Trigger: ATTGGCTCTGGGAGTCTCCCAGGGAATATCAGACTT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTATGGACACTGAGGCTTaGCTTTTCTATGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPMDTEA*LFYEGN
Trigger: ATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCAT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGATGGACACTGAGGCTTaGCTTTTCTATGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWMDTEA*LFYEGN
Trigger: ATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCAT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTCCCGTATGTGTTTTGTaGTGTCTAGTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAPVCVL*CLVRVA
Trigger: GGCCACCCTCACTAGACATCACAAAACACATACGGG...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAGCCACATTACTTACTaGATTCCCGTGGTTTCTACC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTSHITY*IPVVST
Trigger: GGTAGAAACCACGGGAATTCAGTAAGTAATGTGGCT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATTGTCTGCCAGTATCTaGCTGAATACACACATGCTC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTLSASI*LNTHML
Trigger: GAGCATGTGTGTATTCAGTCAGATACTGGCAGACAA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACAAGTTTCCCTGCAGCATaGATTCTCTGGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTSFPAA*ILWFEP
Trigger: TGGTTCAAACCAGAGAATTCATGCTGCAGGGAAACT...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTTAGATTCCATACCTTaGTTTCTCTCTGCGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPLDSIP*FLSAPL
Trigger: CAAAGGCGCAGAGAGAAATCAAGGTATGGAATCTAA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGTTGCACATTACTTGTaGAGCAGGACATGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGVAHYL*SRTWQA
Trigger: GGCTTGCCATGTCCTGCTTCACAAGTAATGTGCAAC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGATGAGGGGTCTAGAATaGCTGTCTTGGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWMRGLE*LSWYSL
Trigger: CAAAGAATACCAAGACAGGCATTCTAGACCCCTCAT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGATCTGCATAGGCAAATaGATGGCTGCTGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWICIGK*MAAGTR
Trigger: TCTAGTCCCAGCAGCCATGCATTTGCCTATGCAGAT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCTGACAGAGGACAACTaGTCCTACATGACCACCATT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWLTEDN*SYMTTI
Trigger: AATGGTGGTCATGTAGGAGCAGTTGTCCTCTGTCAG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTACTCTAGTTCATCCTaGGACATGGCTTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPYSSSS*DMALRF
Trigger: AAATCTCAAAGCCATGTCTCAGGATGAACTAGAGTA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTCAGGCTTAGCCATGTaGAACCCCACAGATACGAAG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQASGLAM*NPTDTK
Trigger: CTTCGTATCTGTGGGGTTTCACATGGCTAAGCCTGA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTCTCATGCTTGGTATTaGGGAGTGATTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSHAWY*GVISPI
Trigger: GATGGGAGAAATCACTCCTCAATACCAAGCATGAGA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGAGATTCACTGCAGGATaGATTTTCTCATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWRFTAG*IFSCLV
Trigger: TACCAAGCATGAGAAAATTCATCCTGCAGTGAATCT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACCCCGTATGTGTTTTGTaGTGTCTAGTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDPVCVL*CLVRVA
Trigger: GGCCACCCTCACTAGACATCACAAAACACATACGGG...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAGCCACATTACTTACTaGATTCCCGTGGTTTCTACC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSHITY*IPVVST
Trigger: GGTAGAAACCACGGGAATTCAGTAAGTAATGTGGCT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCTGCCAGTATCTGACTaGATACACACATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWLPVSD*IHTCSK
Trigger: CTTAGAGCATGTGTGTATTCAGTCAGATACTGGCAG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTAGTTCTCATCCTATGTaGATTCCCTGGTGTAGTATA +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPSSHPM*IPWCSI
Trigger: TATACTACACCAGGGAATTCACATAGGATGAGAACT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCTACTCCAGCCTAGGTaGCAGACTGAGAACCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFLLQPR*QTENLS
Trigger: AGACAGGTTCTCAGTCTGTCACCTAGGCTGGAGTAG...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACACATGACACTGCCTCATaGTGCATTTCTCAGAATGTA +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTHDTAS*CISQNV
Trigger: TACATTCTGAGAAATGCATCATGAGGCAGTGTCATG...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ATGGCAAGCCTGGCTCTATTGCTAGACCAGAAACTGAGTGGAGAAATTCAAGCAGGATGTGTAACTTTTTaGGACTGGCATATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: MASLALLLDQKLSGEIQAGCVTF*DWHIVF
Trigger: GAAAACAATATGCCAGTCTCAAAAAGTTACACATCC...TGCTTGAATTTCTCCACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGAGAAAAACGGACTGTaGAGAAGAAGAGAACCAATT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPEKNGL*RRREPI
Trigger: AATTGGTTCTCTTCTTCTTCACAGTCCGTTTTTCTC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTCCGAAATTGCGCCATTaGACTCCAGCCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: FLSSNKAFTVANGNVTFIPKLRH*TPAWET
Trigger: TGTTTCCCAGGCTGGAGTGCAATGGCGCAATTTCGG...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGTCAAATGGTTGCTCTaGAGCTTGAACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWVKWLL*SLNLLM
Trigger: CATCAGAAGGTTCAAGCTCCAGAGCAACCATTTGAC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTTCATTATGGTCAAATaGTTGCTCTGGAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPFIMVK*LLWSLN
Trigger: GTTCAAGCTCCAGAGCAACCATTTGACCATAATGAA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGTTCATTATGGTCAAATaGTTGCTCTGGAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWFIMVK*LLWSLN
Trigger: GTTCAAGCTCCAGAGCAACCATTTGACCATAATGAA...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGTGAGGGTTGTCTTCTaGATAAATGCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGVRVVF*INAFPH
Trigger: GTGTGGGAAGGCATTTATCCAGAAGACAACCCTCAC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTCTTACTGAATTCCCGTaGTTTCTACCTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPLTEFP*FLPCEF
Trigger: AAACTCACAAGGTAGAAACCACGGGAATTCAGTAAG...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCATAATCCCAGCACTTTaGGAAACCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSIIPAL*ETEVGG
Trigger: TCCGCCCACCTCGGTTTCCCAAAGTGCTGGGATTAT...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCACCTTTTCCGTTGACCTaGTGTTCGTTTTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSPFPLT*CSFSMW
Trigger: CCACATGGAAAACGAACACCAGGTCAACGGAAAAGG...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACTCAGGCTTAGCCATGTaGAACCCCACAGATACGAAG +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDSGLAM*NPTDTK
Trigger: CTTCGTATCTGTGGGGTTTCACATGGCTAAGCCTGA...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAGATTCACTGCAGGATaGATTTTCTCATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTRFTAG*IFSCLV
Trigger: TACCAAGCATGAGAAAATTCATCCTGCAGTGAATCT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGCTCCTGTTTACCACTaGGAACTCTTTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWAPVYH*ELFLFV
Trigger: AACAAACAGAAAGAGTTCTCAGTGGTAAACAGGAGC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATATGTGTTTTCTCATaGAGGGTGAGGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGICVFS*RVRAVF
Trigger: GAAGACAGCCCTCACCCTTCATGAGAAAACACATAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGATGAATTCTCTGGTTTaGACCAGCACCATATTGATA +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWMNSLV*TSTILI
Trigger: TATCAATATGGTGCTGGTTCAAACCAGAGAATTCAT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGCTAGACTTCTTTCATaGAAGAGAGCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGARLLS*KRAFPR
Trigger: TCTGGGGAAAGCTCTCTTTCATGAAAGAAGTCTAGC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAAATTCAAGTCTGCAGTaGGCTATAATGGCACCACTC +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSNSSLQ*AIMAPL
Trigger: GAGTGGTGCCATTATAGCTCACTGCAGACTTGAATT...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCAGAGGGAAGATTGCTTaGGGCCAGGAGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSRGKIA*GQEFNT
Trigger: GGTATTGAACTCCTGGCCTCAAGCAATCTTCCCTCT...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGAGCCATGTGAAACCCTaGGACATGGCTTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGSHVKP*DMALRF
Trigger: AAATCTCAAAGCCATGTCTCAGGGTTTCACATGGCT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGACAACTGCTCCTACATaGCCACCATTACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGTTAPT*PPLQQR
Trigger: TCTCTGTTGTAATGGTGGTCATGTAGGAGCAGTTGT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTACTCTAGTTCATCCTaGAGTGATCGGAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWYSSSS*SDRKCV
Trigger: CACACATTTCCGATCACTTCAGGATGAACTAGAGTA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCAGCTGGGCAGTTCTTaGTTGAGGTCTCATTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFQLGSS*LRSHLW
Trigger: CCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTG...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGAGGGTGAGGAGATATaGTTGTTCACATACATTATC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTEGEEI*LFTYII
Trigger: GATAATGTATGTGAACAAGCATATCTCCTCACCCTC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCTGAATGTGACTGGTTaGCTGGTAGACCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWLNVTG*LVDQNE
Trigger: TTCATTTTGGTCTACCAGGCAACCAGTCACATTCAG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTCTAGAATGCCTGTCTTaGTATTCTTTGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPLECLS*YSLNFT
Trigger: AGTGAAGTTCAAAGAATACCAAGACAGGCATTCTAG...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTATAAGATTACTTGGATaGACACTGAGGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPIRLLG*TLRLDF
Trigger: AAAGTCAAGCCTCAGTGTCCATCCAAGTAATCTTAT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGTGTGTTTTACAGGCTaGCAAACAGTAGGTTACCAT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWVCFTG*QTVGYH
Trigger: ATGGTAACCTACTGTTTGCCAGCCTGTAAAACACAC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAAGACCAGAAACTGAGTaGAGAAATTCAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTRPETE*RNSSIS
Trigger: GCTAATGCTTGAATTTCTCCACTCAGTTTCTGGTCT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGAGTAGAATTCCATCTTaGGAATGTACCACAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWSRIPS*ECTTVY
Trigger: ATACACTGTGGTACATTCCCAAGATGGAATTCTACT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGAAGAAAATGTAAGCTaGACCAAAGGAAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPEENVS*TKGSNE
Trigger: CTCATTACTTCCTTTGGTCCAGCTTACATTTTCTTC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTAATACTCCTGAAGACTaGAAAAGGCTTATCACATGT +
Preference number: 4 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPNTPED*KRLITC
Trigger: ACATGTGATAAGCCTTTTCCAGTCTTCAGGAGTATT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGAGGCATGCCCTACTTTaGGTCTGTTGCTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGRHALL*VCCFKE
Trigger: TTCCTTAAAGCAACAGACCCAAAGTAGGGCATGCCT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATGTCCTGAATGTGACTaGTTGCCTGGTAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSCPECD*LPGRPK
Trigger: TTTTGGTCTACCAGGCAACCAGTCACATTCAGGACA...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGGTGAGAACTAGATATTaGAGACCTAGTACTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWVRTRY*RPSTDN
Trigger: ATTGTCAGTACTAGGTCTCCAATATCTAGTTCTCAC...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGTTCTTTCTCCTCTGTaGGCTCTAGTATGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWVLSPL*ALVCVN
Trigger: ATTTACACATACTAGAGCTCACAGAGGAGAAAGAAC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATGGACACTGAGGCTTaGCTTTTCTATGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGMDTEA*LFYEGN
Trigger: ATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTATATGTGTTTTCTCATaGAGGGTGAGGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAICVFS*RVRAVF
Trigger: GAAGACAGCCCTCACCCTTCATGAGAAAACACATAT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTAATAAAAACATTAGCTaGGAGGAATGGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQANKNIS*EEWRLP
Trigger: AGGCAGGCGCCATTCCTCTCAGCTAATGTTTTTATT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGAATGACACTGATCCCTaGGACATGGCTTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGNDTDP*DMALRF
Trigger: AAATCTCAAAGCCATGTCTCAGGGATCAGTGTCATT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439428.5
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGCTGGGACTAGAAAGTaGAAATGGGAAACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSAGTRK*KWETEE
Trigger: TTCTTCCGTTTCCCATTTTCACTTTCTAGTCCCAGC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTTATACATTCTACTGTaGGGCATGCCCTACTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQALYILL*GMPYFG
Trigger: CCCAAAGTAGGGCATGCCTCACAGTAGAATGTATAA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTCAACACCTCCCAAAGTaGTGGGATTACAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAQHLPK*WDYRNE
Trigger: CTCATTTCTGTAATCCCAGCACTTTGGGAGGTGTTG...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTTCATTATGGTCAAATaGTTGCTCTGGAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWFIMVK*LLWSLN
Trigger: GTTCAAGCTCCAGAGCAACCATTTGACCATAATGAA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAATAAGATTACTTGGATaGACACTGAGGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTIRLLG*TLRLDF
Trigger: AAAGTCAAGCCTCAGTGTCCATCCAAGTAATCTTAT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTGTGAGGGTTGTCTTCTaGATAAATGCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FLSSNKAFTVANGNVTFIVRVVF*INAFPH
Trigger: GTGTGGGAAGGCATTTATCCAGAAGACAACCCTCAC...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGTGTGTTTTACAGGCTaGCAAACAGTAGGTTACCAT +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSVCFTG*QTVGYH
Trigger: ATGGTAACCTACTGTTTGCCAGCCTGTAAAACACAC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATAAGGCATTTACTGTaGCTAACGGCAATGTCACGT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGIRHLL*LTAMSR
Trigger: ACGTGACATTGCCGTTAGCCACAGTAAATGCCTTAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAAGTAAAAACATTTCCTaGGTATGCTCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSSKNIS*VCSVES
Trigger: GGACTCCACAGAGCATACCCAGGAAATGTTTTTACT...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 72 bp TTACTGTGGCTAACGGCAATGTCACGTTTATTACATTaGCCTGGAAGATTTGGGCTGTGGCTAAATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLWLTAMSRLLH*PGRFGLWLNVF
Trigger: AAAAACATTTAGCCACAGCCCAAATCTTCCAGGCAAATGTAATAAACGTGACATTGCCGTTAGCCACAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 72 bp GACTGGCATATTGTTTTCCAGACCGGCTTTACCATTTaGCCTTTCCTATTAGCAATGTATGAAAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: DWHIVFQTGFTI*PFLLAMYESSS
Trigger: ACTGGAACTTTCATACATTGCTAATAGGAAAGGCAAAATGGTAAAGCCGGTCTGGAAAACAATATGCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACTCTCATGCTTGGTATTaGGGAGTGATTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDSHAWY*GVISPI
Trigger: GATGGGAGAAATCACTCCTCAATACCAAGCATGAGA...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGCTCCTGTTTACCACTaGGAACTCTTTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSAPVYH*ELFLFV
Trigger: AACAAACAGAAAGAGTTCTCAGTGGTAAACAGGAGC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCATATGTGTTTTCTCATaGAGGGTGAGGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFICVFS*RVRAVF
Trigger: GAAGACAGCCCTCACCCTTCATGAGAAAACACATAT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACTTGTCTGCCAGTATCTaGCTGAATACACACATGCTC +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDLSASI*LNTHML
Trigger: GAGCATGTGTGTATTCAGTCAGATACTGGCAGACAA...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTCCTGTTAGTCCTCTaGACTGATGAACTCATTTTG +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVLLVL*TDELIL
Trigger: CAAAATGAGTTCATCAGTTCAGAGGACTAACAGGAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTTAAAGGTTGGTGGATaGGCTAAAGAGGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWLKVGG*AKEEFS
Trigger: AGAAAATTCCTCTTTAGCTCATCCACCAACCTTTAA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTGATCGGAAATGTGTaGGAACTAGATATTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVIGNV*ELDIGD
Trigger: GTCTCCAATATCTAGTTCTCACACATTTCCGATCAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTATGAGGGGTCTAGAATaGCTGTCTTGGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAMRGLE*LSWYSL
Trigger: CAAAGAATACCAAGACAGGCATTCTAGACCCCTCAT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACAAGGGAAATGCTGGATaGCTCTCCTCTAGTAGACTT +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDKGNAG*LSSSRL
Trigger: AAGTCTACTAGAGGAGAGGCATCCAGCATTTCCCTT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCTGATGAACTCATTTTaGATATGCCTTATGACCTTG +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWLMNSF*ICLMTL
Trigger: CAAGGTCATAAGGCATATGCAAAATGAGTTCATCAG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTAGTTCAGAGACAGTGTaGGGTCTGTGTGTGAATAAA +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQASSETV*GLCVNK
Trigger: TTTATTCACACACAGACCGCACACTGTCTCTGAACT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTGTGTTTTACAGGCTaGCAAACAGTAGGTTACCAT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVCFTG*QTVGYH
Trigger: ATGGTAACCTACTGTTTGCCAGCCTGTAAAACACAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCACCACATGACATTTTaGTCCATGATGGACTGCATA +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSHHMTF*SMMDCI
Trigger: TATGCAGTCCATCATGGACCAAAATGTCATGTGGTG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAATAAGTACTTATAAGTaGGATTGCTGGGTCATATTG +
Preference number: 4 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTISTYK*DCWVIL
Trigger: CAATATGACCCAGCAATCCCACTTATAAGTACTTAT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTAGATTCACTGCAGGATaGATTTTCTCATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSRFTAG*IFSCLV
Trigger: TACCAAGCATGAGAAAATTCATCCTGCAGTGAATCT...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGTTCTTTCTCCTCTGTaGGCTCTAGTATGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAVLSPL*ALVCVN
Trigger: ATTTACACATACTAGAGCTCACAGAGGAGAAAGAAC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCATGGACACTGAGGCTTaGCTTTTCTATGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFMDTEA*LFYEGN
Trigger: ATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCAT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATGAATTCTCTGGTTTaGACCAGCACCATATTGATA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGMNSLV*TSTILI
Trigger: TATCAATATGGTGCTGGTTCAAACCAGAGAATTCAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR TCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTACTCCGAGGCTTCATTaGGGACATAAAAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQATPRLH*GHKSFV
Trigger: TACAAAACTTTTATGTCCTCAATGAAGCCTCGGAGT...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCATGAGGGGTCTAGAATaGCTGTCTTGGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFMRGLE*LSWYSL
Trigger: CAAAGAATACCAAGACAGGCATTCTAGACCCCTCAT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACATGAGGGGTCTAGAATaGCTGTCTTGGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDMRGLE*LSWYSL
Trigger: CAAAGAATACCAAGACAGGCATTCTAGACCCCTCAT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGCCAGTTTTTCTTCATaGCAAAATCACCTATTAGTA +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWASFSS*QNHLLV
Trigger: TACTAATAGGTGATTTTGGCATGAAGAAAAACTGGC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTACAGGCATTTTATCTaGATAGGCAAATGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAYRHFI*IGKCMA
Trigger: AGCCATGCATTTGCCTATGCAGATAAAATGCCTGTA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAGTAGGTTTTACAGATaGAATGACAGAAATACGTAC +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSRFYR*NDRNTY
Trigger: GTACGTATTTCTGTCATTGCATCTGTAAAACCTACT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTTTCATTATGGTCAAATaGTTGCTCTGGAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSFIMVK*LLWSLN
Trigger: GTTCAAGCTCCAGAGCAACCATTTGACCATAATGAA...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATAAGATTACTTGGATaGACACTGAGGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGIRLLG*TLRLDF
Trigger: AAAGTCAAGCCTCAGTGTCCATCCAAGTAATCTTAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTCTTACTGAATTCCCGTaGTTTCTACCTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQALTEFP*FLPCEF
Trigger: AAACTCACAAGGTAGAAACCACGGGAATTCAGTAAG...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGGAGAAAGAATATATATaGACCCCTCAATTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWEKEYI*TPQLSC
Trigger: ACAACTCAATTGAGGGGTCCATATATATTCTTTCTC...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTTTGAGCTCCTCTTTTaGAAAAAGAAACAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAFELLF*KKKQSS
Trigger: GGAGGACTGTTTCTTTTTCCAAAAGAGGAGCTCAAA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGAATGTACTTTGTCTGTaGAACATACAGGTGGTGATA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGNVLCL*NIQVVI
Trigger: TATCACCACCTGTATGTTCCACAGACAAAGTACATT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
3UTR CAA 72 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTaGCAAGCAACATCATCTACAGGGTTTACTATGACT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILR*QATSSTGFTMT
Trigger: AGTCATAGTAAACCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACAGATTCACTGCAGGATaGATTTTCTCATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDRFTAG*IFSCLV
Trigger: TACCAAGCATGAGAAAATTCATCCTGCAGTGAATCT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACGTTCTTTCTCCTCTGTaGGCTCTAGTATGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDVLSPL*ALVCVN
Trigger: ATTTACACATACTAGAGCTCACAGAGGAGAAAGAAC...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR TCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTTCATCATTTGTACCTaGCCAGTAGATACAGACCAT +
Preference number: 4 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSFIICT*PVDTDH
Trigger: ATGGTCTGTATCTACTGGTCAGGTACAAATGATGAA...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCATGTTAGGTGGAAATaGCAATTAAGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSHVRWK*QLSNHG
Trigger: ACCATGGTTACTTAATTGTCATTTCCACCTAACATG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR GCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATTTATGGAGATTCACTaGAGGATGAATTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSFMEIH*RMNFLM
Trigger: CATGAGAAAATTCATCCTGCAGTGAATCTCCATAAA...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACGTTGGATATTACGCTTaGAAGCAACATCATCTACAG +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDVGYYA*KQHHLQ
Trigger: CTGTAGATGATGTTGCTTGCAAGCGTAATATCCAAC...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR GCA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAAACTCATTTTGCATATaGCTTATGACCTTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TMWYSTLNCWILRLQATSNSFCI*LMTLQL
Trigger: TAACTGCAAGGTCATAAGGCATATGCAAAATGAGTT...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCTAGAATGCCTGTCTTaGTATTCTTTGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSLECLS*YSLNFT
Trigger: AGTGAAGTTCAAAGAATACCAAGACAGGCATTCTAG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCTTTATTACATTTGCCTaGAAGATTTGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFFITFA*KIWAVA
Trigger: AGCCACAGCCCAAATCTTCCAGGCAAATGTAATAAA...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCGTAACTTTTTGGGACTaGGTTCTTTCCTTTAGCGTA +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFVTFWD*VLSFSV
Trigger: TACGCTAAAGGAAAGAACCCAGTCCCAAAAAGTTAC...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCAGTATGTAACTTTTTaGGACTGGGTTCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: MWYSTLNCWILRLQATSSQYVTF*DWVLSF
Trigger: AAAGGAAAGAACCCAGTCCCAAAAAGTTACATACTG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGTATGGAGATAGGCAATaGGGATATTATGACATGATA +
Preference number: 4 (lower is better)
Translates to: YSTLNCWILRLQATSSTGYGDRQ*GYYDMI
Trigger: TATCATGTCATAATATCCCCATTGCCTATCTCCATA...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR TCA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCTATCCATTTACACACTaGAGAACATTTGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSYPFTH*RTFACL
Trigger: GAGACAAGCAAATGTTCTTCAGTGTGTAAATGGATA...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR TCA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACCATTATTGTTATCGTTaGGTAGAATTCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDHYCYR*VEFHLG
Trigger: CCCAAGATGGAATTCTACTCAACGATAACAATAATG...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR GCA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTTGGAATACAGCCCAATaGTGTTTCATGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: FLSSNKAFTVANGNVTFIWNTAQ*CFMPKY
Trigger: ATATTTTGGCATGAAACAGCATTGGGCTGTATTCCA...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCCTAGAATGCCTGTCTTaGTATTCTTTGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFLECLS*YSLNFT
Trigger: AGTGAAGTTCAAAGAATACCAAGACAGGCATTCTAG...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CCA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTATTCTTGTCAGCACTTaGTATTGTCACATATCTAGG +
Preference number: 4 (lower is better)
Translates to: FLSSNKAFTVANGNVTFIILVST*YCHISR
Trigger: CCTAGATATGTGACAATACCAAGTGCTGACAAGAAT...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
3UTR CAA 72 bp TTCATCTATGTAGCTGCATGTTTCAGTAGCTCATTATaGTTATCGTTGAGTAGAATTCCATCTTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: FIYVAACFSSSL*LSLSRIPSWEC
Trigger: ACATTCCCAAGATGGAATTCTACTCAACGATAACAATAATGAGCTACTGAAACATGCAGCTACATAGATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS CCA 90 bp CCCCTTCGCGGAGCTCGCTCCGGGTCACCCTCAAGGTCACGCCCATaGACCACGCCCGAGGCCCGGCTCGTACAGATCGGAGCGTCTGGA +
Preference number: 5 (lower is better)
Translates to: PLRGARSGSPSRSRP*TTPEARLVQIGASG
Trigger: TCCAGACGCTCCGATCTGTACGAGCCGGGCCTCGGGCGTGGTCCATGGGCGTGACCTTGAGGGTGACCCGGAGCGAGCTCCGCGAAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CCA 90 bp CCCATGGACCACGCCCGAGGCCCGGCTCGTACAGATCGGAGCGTCTaGATACCGCGGTCCCGGTTTCCTCCTCAGAATTTCCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PMDHARGPARTDRSV*IPRSRFPPQNFQAR
Trigger: CCGGGCCTGGAAATTCTGAGGAGGAAACCGGGACCGCGGTATCCAGACGCTCCGATCTGTACGAGCCGGGCCTCGGGCGTGGTCCATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CCA 90 bp CGGGTCTGGATGCGAGAAGAGCTCACGGCAGGGGACCTGGGTTCATaGGACGCGGAGAGGGTTTGTGGAGGCAGAAGCCCCAGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: RVWMREELTAGDLGS*DAERVCGGRSPRPV
Trigger: CACAGGCCTGGGGCTTCTGCCTCCACAAACCCTCTCCGCGTCCCATGAACCCAGGTCCCCTGCCGTGAGCTCTTCTCGCATCCAGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS GCA 90 bp CAAGTCACCTGCTGGGGAGGGAGACTGTGTGATTGTGTTTGTGTGTaGCGTTCTGTGGCTGCGTCCGTGTGTGGTGGTGTGAGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: QVTCWGGRLCDCVCV*RSVAASVCGGVSGR
Trigger: GCGCCCACTCACACCACCACACACGGACGCAGCCACAGAACGGCACACACAAACACAATCACACAGTCTCCCTCCCCAGCAGGTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS GCA 90 bp TGGGACGCGGAGAGGGTTTGTGGAGGCAGAAGCCCCAGGCCTGTGTaGAAGTCACCTGCTGGGGAGGGAGACTGTGTGATTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: WDAERVCGGRSPRPV*KSPAGEGDCVIVFV
Trigger: CACAAACACAATCACACAGTCTCCCTCCCCAGCAGGTGACTTGCACACAGGCCTGGGGCTTCTGCCTCCACAAACCCTCTCCGCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CAA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGCATTTGTGGTACCAGTaGGGTGTTAGCAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQHLWYQ*GVSRVH
Trigger: GTGGACCCTGCTAACACCCAACTGGTACCACAAATG...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTGGACGCGGAGAGGGTTaGTGGAGGCAGAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPGRGEG*WRQKPQ
Trigger: CTGGGGCTTCTGCCTCCACAAACCCTCTCCGCGTCC...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CAA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACACCCACGGCCGCCCTATaGCGGCTGGCACTACGCTTC +
Preference number: 5 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTPTAAL*RLALRF
Trigger: GAAGCGTAGTGCCAGCCGCAATAGGGCGGCCGTGGG...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS-3UTR CAA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGTTTCTCTCTGCGCCTTaGTTGAGAAATGACAGCACG +
Preference number: 5 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQFLSAP*LRNDST
Trigger: CGTGCTGTCATTTCTCAACAAAGGCGCAGAGAGAAA...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACATGGCAGGAGACTTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTWQETC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAAGTCTCCTGCCA...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGTATAATCCCAGCACTTaGGGAAACCGAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWYNPST*GNRGGR
Trigger: CCGCCCACCTCGGTTTCCCAAAGTGCTGGGATTATA...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACTCTCTGCGCCTTTGTaGAGAAATGACAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTLSAPL*RNDSTG
Trigger: CCCCGTGCTGTCATTTCTCAACAAAGGCGCAGAGAG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGCTGTGGCAGGAGACTaGCTTGAACCTGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAAVAGD*LEPGRR
Trigger: CCGCCTCCCAGGTTCAAGCAAGTCTCCTGCCACAGC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS TCA 90 bp GTACTTTGTCTGTGGAACATACAGGTGGTGATAGCTACTGGAGGTTaGATATTCGGTTCTGACACTCTGGACAGAGGTCTAGAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: VLCLWNIQVVIATGG*IFGSDTLDRGLEWR
Trigger: TCTCCACTCTAGACCTCTGTCCAGAGTGTCAGAACCGAATATTCAACCTCCAGTAGCTATCACCACCTGTATGTTCCACAGACAAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CAA 90 bp TTGGGAAGGCCTCAGCTGGGCAGTTCTTGCTTGAGGTCTCATTTGTGGTACCAGCTGTCTTGGTATTCTTaGAACTTCACTAAGACATCT +
Preference number: 5 (lower is better)
Translates to: LGRPQLGSSCLRSHLWYQLSWYS*NFTKTS
Trigger: AGATGTCTTAGTGAAGTTCAAAGAATACCAAGACAG...CTGGTACCACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGAGGCCTTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGTCAGCTGGGCAGTTCTaGCTTGAGGTCTCATTTGTG +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWSAGQF*LEVSFV
Trigger: CACAAATGAGACCTCAAGCAAGAACTGCCCAGCTGA...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGCCGAAATTGCGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGAEIAP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCGCAATTTCGGC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCGAGGTGGGCGGAGGATaGCCTGAGGTCAGGACTTCG +
Preference number: 5 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFEVGGG*PEVRTS
Trigger: CGAAGTCCTGACCTCAGGCAATCCTCCGCCCACCTC...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGCGGCTCCCTTTTCCGTaGACCTGGTGTTCGTTTTCC +
Preference number: 5 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWRLPFP*TWCSFS
Trigger: GGAAAACGAACACCAGGTCAACGGAAAAGGGAGCCG...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS TCA 90 bp ATATTTCACCTCATGCCACTTGCCTGCCTCAGCCTAATCTGGCCCTaGCTGAAGACTAATTTCATGGAAGCAAATCCCAATATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: IFHLMPLACLSLIWP*LKTNFMEANPNIRE
Trigger: TTCCCTGATATTGGGATTTGCTTCCATGAAATTAGTCTTCAGTCAGGGCCAGATTAGGCTGAGGCAGGCAAGTGGCATGAGGTGAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460384.1
ENST00000463910.1
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTGGTTGCTCTGGAGCTaGAACCTTCTGATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPWLLWS*NLLMLN
Trigger: ATTCAGCATCAGAAGGTTCAAGCTCCAGAGCAACCA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTGCTTGAGGTCTCATTaGTGGTACCAGTTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPCLRSH*WYQLGV
Trigger: AACACCCAACTGGTACCACAAATGAGACCTCAAGCA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACACTGGGCAGTTCTTGCTaGAGGTCTCATTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTLGSSC*RSHLWY
Trigger: GTACCACAAATGAGACCTCAAGCAAGAACTGCCCAG...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGACAGCACGGGGTCTTTaGAGGATAGATCGCATTATC +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWTARGL*RIDRII
Trigger: GATAATGCGATCTATCCTCAAAAGACCCCGTGCTGT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GGGACACAGAGGGTGAGGAGATATGCTTGTTCACATACATTATCAGGAAATACAGCAAGCCTGGCTCTATaGCTAGACCAGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: GTQRVRRYACSHTLSGNTASLAL*LDQKLS
Trigger: ACTCAGTTTCTGGTCTAGCAATAGAGCCAGGCTTGC...TGTATTTCCTGATAATGTATGTGAACAAGCATATCTCCTCACCCTCTGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTTGTTGTAGACTAGTGTaGGAGCCTGTGCTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPCCRLV*EPVLLL
Trigger: CAGCAAAAGCACAGGCTCCAACACTAGTCTACAACA...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTTTGTTGGCCAGGAATTaGGGAAGGCCTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FLSSNKAFTVANGNVTFILLARN*GRPQLG
Trigger: GCCCAGCTGAGGCCTTCCCAAATTCCTGGCCAACAA...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTTGCAATGAGCCGAAATaGCGCCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSNNICVCVCVCVCVLQACNEPK*RHCTPA
Trigger: GGCTGGAGTGCAATGGCGCAATTTCGGCTCATTGCA...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGCTAGGTAGCTGTAACTaGGAAAAATTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWLGSCN*EKFSVS
Trigger: GGACACAGAGAATTTTTCCAAGTTACAGCTACCTAG...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTCTAGGTAGCTGTAACTaGGAAAAATTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPLGSCN*EKFSVS
Trigger: GGACACAGAGAATTTTTCCAAGTTACAGCTACCTAG...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGATTATGGTCAAATGGTaGCTCTGGAGCTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWIMVKW*LWSLNL
Trigger: AAGGTTCAAGCTCCAGAGCAACCATTTGACCATAAT...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp CTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGTCAGTTGGTCACGTTTATTACATTaGCCTGGAAGATTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLLKNLYSLCSPWTTVSWSRLLH*PGRFGL
Trigger: CAGCCCAAATCTTCCAGGCAAATGTAATAAACGTGA...CCAACTGACTGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAGGCAGGAGAATTGCTaGAGTCCAGGAATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWRQENC*SPGIQV
Trigger: GACTTGAATTCCTGGACTCAAGCAATTCTCCTGCCT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAATTATGGTCAAATGGTaGCTCTGGAGCTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTIMVKW*LWSLNL
Trigger: AAGGTTCAAGCTCCAGAGCAACCATTTGACCATAAT...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGAGCCTGATGATTTTGTaGGCCAGGAATTTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGSLMIL*ARNLGR
Trigger: CCTTCCCAAATTCCTGGCCAACAAAATCATCAGGCT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAGTGGAGAGGGGTATTaGAGAGTCACTAGAATCACA +
Preference number: 5 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWSGEGY*RVTRIT
Trigger: TGTGATTCTAGTGACTCTCAAATACCCCTCTCCACT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CAA 90 bp TCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGACCACAGAGAACTCTTTCTGTTaGTTTATGGAGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: SYLLLLKNLYSLCSPWTTENSFC*FMEIHC
Trigger: GCAGTGAATCTCCATAAACAAACAGAAAGAGTTCTC...TGTGGTCCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTTGGTTGCTCTGGAGCTaGAACCTTCTGATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSWLLWS*NLLMLN
Trigger: ATTCAGCATCAGAAGGTTCAAGCTCCAGAGCAACCA...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGCACCACATGACATTTaGGTCCATGATGGACTGCAT +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSAPHDI*VHDGLH
Trigger: ATGCAGTCCATCATGGACCAAAATGTCATGTGGTGC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTACTGATGAACTCATTTaGCATATGCCTTATGACCTT +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPTDELI*HMPYDL
Trigger: AAGGTCATAAGGCATATGCAAAATGAGTTCATCAGT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGAAGAAAGAGTTCCAGTaGTTCCACATTCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWKKEFQ*FHILVS
Trigger: GCTGACAAGAATGTGGAACAACTGGAACTCTTTCTT...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp GTGTGTGTGTTTTACAGGCTGGCAAACAGTAGGTTACCATGTGGTATAGTACCTAGGAAAAATTTCATTTaGTACTCCGAGGCTTCATTG +
Preference number: 5 (lower is better)
Translates to: VCVFYRLANSRLPCGIVPRKNFI*YSEASL
Trigger: CAATGAAGCCTCGGAGTACAAAATGAAATTTTTCCT...AGGTACTATACCACATGGTAACCTACTGTTTGCCAGCCTGTAAAACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGATTATGGTCAAATGGTaGCTCTGGAGCTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGIMVKW*LWSLNL
Trigger: AAGGTTCAAGCTCCAGAGCAACCATTTGACCATAAT...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TACAGTTCATACCTCCTTCTTTTAAAGAACCTCTACTCACTGTGTAGTCCATGGTGTTGGATATTACGCTaGCAAGCAACATCATCTACA +
Preference number: 5 (lower is better)
Translates to: YSSYLLLLKNLYSLCSPWCWILR*QATSST
Trigger: TGTAGATGATGTTGCTTGCAAGCGTAATATCCAACA...CCATGGACTACACAGTGAGTAGAGGTTCTTTAAAAGAAGGAGGTATGAACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACTACCTTCCCTTTCTTTaGCTGAGCCACATCCTTTGC +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDYLPFL*LSHILC
Trigger: GCAAAGGATGTGGCTCAGCAAAAGAAAGGGAAGGTA...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGGTGAGGAGATATGCTaGTTCACATACATTATCAGG +
Preference number: 5 (lower is better)
Translates to: TMWYSTLNCWILRLQATSGEEIC*FTYIIR
Trigger: CCTGATAATGTATGTGAACAAGCATATCTCCTCACC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGAGAACTCTTTCTGTTaGTTTATGGAGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: TMWYSTLNCWILRLQATSENSFC*FMEIHC
Trigger: GCAGTGAATCTCCATAAACAAACAGAAAGAGTTCTC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGTGTTGGATATTACGCTaGCAAGCAACATCATCTACA +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGCWILR*QATSST
Trigger: TGTAGATGATGTTGCTTGCAAGCGTAATATCCAACA...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGGTTTTCACAATAACATaGATTGAGTTTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGVFTIT*IEFPCS
Trigger: GCTGCAGGGAAACTCAATCAATGTTATTGTGAAAAC...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACCCTGTGCTTTTGCTGTaGCACATTACTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDPVLLL*HITCEA
Trigger: TGCTTCACAAGTAATGTGCAACAGCAAAAGCACAGG...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTTTGGAGCCTGTGCTTTaGCTGTTGCACATTACTTGT +
Preference number: 5 (lower is better)
Translates to: FLSSNKAFTVANGNVTFILEPVL*LLHITC
Trigger: ACAAGTAATGTGCAACAGCAAAAGCACAGGCTCCAA...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp ACCATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCAGTACTCACAACGAATTaGTTTTGTAGGAATACAGGG +
Preference number: 5 (lower is better)
Translates to: TMWYSTLNCWILRLQATSVLTTN*FCRNTG
Trigger: CCCTGTATTCCTACAAAACAAATTCGTTGTGAGTAC...TGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACCTAGGTAGCTGTAACTaGGAAAAATTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDLGSCN*EKFSVS
Trigger: GGACACAGAGAATTTTTCCAAGTTACAGCTACCTAG...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TTGTCTAATAATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGGCTGAGAACTCTTTCTGTTaGTTTATGGAGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: LSNNICVCVCVCVCVLQAENSFC*FMEIHC
Trigger: GCAGTGAATCTCCATAAACAAACAGAAAGAGTTCTC...AGCCTGTAAAACACACACACACACACACACACACACACAAATATTATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGAGAACTCTTTCTGTTaGTTTATGGAGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSENSFC*FMEIHC
Trigger: GCAGTGAATCTCCATAAACAAACAGAAAGAGTTCTC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACATTATGGTCAAATGGTaGCTCTGGAGCTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDIMVKW*LWSLNL
Trigger: AAGGTTCAAGCTCCAGAGCAACCATTTGACCATAAT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292928.7
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGTTTTCACAATAACATaGATTGAGTTTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSVFTIT*IEFPCS
Trigger: GCTGCAGGGAAACTCAATCAATGTTATTGTGAAAAC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292928.7
ENST00000439428.5
CDS-3UTR CAA 90 bp TATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTACAGGGTTCCATATTCATCATTaGTACCTGACCAGTAGATAC +
Preference number: 5 (lower is better)
Translates to: YSTLNCWILRLQATSSTGFHIHH*YLTSRY
Trigger: GTATCTACTGGTCAGGTACAAATGATGAATATGGAA...CCCTGTAGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCAGTCCCAAGACCCATTaGTTTCCTTGTAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFSPKTH*FPCNLP
Trigger: AGGAAGATTACAAGGAAACAAATGGGTCTTGGGACT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACAAAAGCCTGATGATTTaGTTGGCCAGGAATTTGGGA +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDKSLMI*LARNLG
Trigger: TCCCAAATTCCTGGCCAACAAAATCATCAGGCTTTT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCTTTGAGACTGGCATATaGTTTTCCAGACCGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFFETGI*FSRPAL
Trigger: TAAAGCCGGTCTGGAAAACAATATGCCAGTCTCAAA...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TGGATAAAAATAAATAAACTTCTGCCACACGTACTAATGATTAGACTCACGGACAGAGATGGTCGTAAATaGGCTGTAGAGTGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: WIKINKLLPHVLMIRLTDRDGRK*AVEWKR
Trigger: TCTTTTCCACTCTACAGCCAATTTACGACCATCTCT...GTCCGTGAGTCTAATCATTAGTACGTGTGGCAGAAGTTTATTTATTTTTATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTCTGTCTTGGTATTCTTaGAACTTCACTAAGACATCT +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSLSWYS*NFTKTS
Trigger: AGATGTCTTAGTGAAGTTCAAAGAATACCAAGACAG...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS-3UTR CAA 90 bp TACATTATCAGGAAATACACAGCAGTTATAGGAACCATGTTTATAAGATGGAGCATTAGATTCCATACCTaGATTTCTCTCTGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: YIIRKYTAVIGTMFIRWSIRFHT*ISLCAF
Trigger: AAAGGCGCAGAGAGAAATCAAGGTATGGAATCTAAT...GCTCCATCTTATAAACATGGTTCCTATAACTGCTGTGTATTTCCTGATAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp TTTTTGAGTTCAAATAAGGCATTTACTGTGGCTAACGGCAATGTCACGTTTATTACCATTGTGTTACAATaGCCTATAGTATCCAGCACA +
Preference number: 5 (lower is better)
Translates to: FLSSNKAFTVANGNVTFITIVLQ*PIVSST
Trigger: TGTGCTGGATACTATAGGCAATTGTAACACAATGGT...AATAAACGTGACATTGCCGTTAGCCACAGTAAATGCCTTATTTGAACTCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp ATGTGGTATAGTACCTTAAACTGTTGGATATTACGCTTGCAAGCAACATCATCTGACACTCAGCAACATTaGATCTGTTTTCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: MWYSTLNCWILRLQATSSDTQQH*ICFLLL
Trigger: TAACAACAGAAAACAGATCAAATGTTGCTGAGTGTC...AGATGATGTTGCTTGCAAGCGTAATATCCAACAGTTTAAGGTACTATACCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS-3UTR CAA 90 bp AGACTTTCTTTAAAGCATTCAAAAGTACCTCCTTCACGGACATTCATTAGATTCATATGCCTTATGACCTaGCAGTTAGGTCTACAAAAT +
Preference number: 5 (lower is better)
Translates to: RLSLKHSKVPPSRTFIRFICLMT*QLGLQN
Trigger: ATTTTGTAGACCTAACTGCAAGGTCATAAGGCATAT...GAATCTAATGAATGTCCGTGAAGGAGGTACTTTTGAATGCTTTAAAGAAAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292928.7
CDS CCA 72 bp CAGCGCCCGCTCCGCGCGGGGACCCGCCGCCAGCGATaGCGCTTCCGCGGGATCAGAACGGGCAAAATCCCC +
Preference number: 6 (lower is better)
Translates to: QRPLRAGTRRQR*RFRGIRTGKIP
Trigger: GGGGATTTTGCCCGTTCTGATCCCGCGGAAGCGCCATCGCTGGCGGCGGGTCCCCGCGCGGAGCGGGCGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CAA 72 bp CGGCGCTCCCCTCCGTTTGCACCCACGGCCGCCCTATaGCGGCTGGCACTACGCTTCTGCCAGGACCCCGGC +
Preference number: 6 (lower is better)
Translates to: RRSPPFAPTAAL*RLALRFCQDPG
Trigger: GCCGGGGTCCTGGCAGAAGCGTAGTGCCAGCCGCAATAGGGCGGCCGTGGGTGCAAACGGAGGGGAGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS GCA 72 bp GGCGCTCCCCTCCGTTTGCACCCACGGCCGCCCTATTaGGGCTGGCACTACGCTTCTGCCAGGACCCCGGCT +
Preference number: 6 (lower is better)
Translates to: GAPLRLHPRPPY*GWHYASARTPA
Trigger: AGCCGGGGTCCTGGCAGAAGCGTAGTGCCAGCCGCAATAGGGCGGCCGTGGGTGCAAACGGAGGGGAGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS CAA 90 bp GCGTCCTTAGACAGCTCTCCCGGAACGGAGCTCCCAGTGCCCTCCTaGGCCTCCTCAGCACCCCTGGCACCCACCAAGCCTCACCCCCGG +
Preference number: 6 (lower is better)
Translates to: ASLDSSPGTELPVPS*ASSAPLAPTKPHPR
Trigger: CCGGGGGTGAGGCTTGGTGGGTGCCAGGGGTGCTGAGGAGGCCAAGGAGGGCACTGGGAGCTCCGTTCCGGGAGAGCTGTCTAAGGACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423582.5
ENST00000460670.5
ENST00000463910.1
CDS CCA 72 bp GGAGCTCGCTCCGGGTCACCCTCAAGGTCACGCCCATaGACCACGCCCGAGGCCCGGCTCGTACAGATCGGA +
Preference number: 6 (lower is better)
Translates to: GARSGSPSRSRP*TTPEARLVQIG
Trigger: TCCGATCTGTACGAGCCGGGCCTCGGGCGTGGTCCATGGGCGTGACCTTGAGGGTGACCCGGAGCGAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CCA 72 bp CCCCTCCGTTTGCACCCACGGCCGCCCTATTGCGGCTaGCACTACGCTTCTGCCAGGACCCCGGCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: PLRLHPRPPYCG*HYASARTPAPF
Trigger: AAAGGGAGCCGGGGTCCTGGCAGAAGCGTAGTGCCAGCCGCAATAGGGCGGCCGTGGGTGCAAACGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS CAA 90 bp CGGTCCCGGTTTCCTCCTCAGAATTTCCAGGCCCGGCTCGGACTCTaGGTTACCTCCCTGGCCTCCCCACCCGGTTCCGCGTCCTTAGAC +
Preference number: 6 (lower is better)
Translates to: RSRFPPQNFQARLGL*VTSLASPPGSASLD
Trigger: GTCTAAGGACGCGGAACCGGGTGGGGAGGCCAGGGAGGTAACCAAGAGTCCGAGCCGGGCCTGGAAATTCTGAGGAGGAAACCGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CCA 72 bp AGGGGACCTGGGTTCATGGGACGCGGAGAGGGTTTGTaGAGGCAGAAGCCCCAGGCCTGTGTGCAAGTCACC +
Preference number: 6 (lower is better)
Translates to: RGPGFMGRGEGL*RQKPQACVQVT
Trigger: GGTGACTTGCACACAGGCCTGGGGCTTCTGCCTCCACAAACCCTCTCCGCGTCCCATGAACCCAGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS CCA 72 bp ATGCGAGAAGAGCTCACGGCAGGGGACCTGGGTTCATaGGACGCGGAGAGGGTTTGTGGAGGCAGAAGCCCC +
Preference number: 6 (lower is better)
Translates to: MREELTAGDLGS*DAERVCGGRSP
Trigger: GGGGCTTCTGCCTCCACAAACCCTCTCCGCGTCCCATGAACCCAGGTCCCCTGCCGTGAGCTCTTCTCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS CCA 72 bp GGGTCTGGATGCGAGAAGAGCTCACGGCAGGGGACCTaGGTTCATGGGACGCGGAGAGGGTTTGTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: GSGCEKSSRQGT*VHGTRRGFVEA
Trigger: TGCCTCCACAAACCCTCTCCGCGTCCCATGAACCCAGGTCCCCTGCCGTGAGCTCTTCTCGCATCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS CCA 72 bp CACGCCCGAGGCCCGGCTCGTACAGATCGGAGCGTCTaGATACCGCGGTCCCGGTTTCCTCCTCAGAATTTC +
Preference number: 6 (lower is better)
Translates to: HARGPARTDRSV*IPRSRFPPQNF
Trigger: GAAATTCTGAGGAGGAAACCGGGACCGCGGTATCCAGACGCTCCGATCTGTACGAGCCGGGCCTCGGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS CAA 72 bp TTTCCTCCTCAGAATTTCCAGGCCCGGCTCGGACTCTaGGTTACCTCCCTGGCCTCCCCACCCGGTTCCGCG +
Preference number: 6 (lower is better)
Translates to: FPPQNFQARLGL*VTSLASPPGSA
Trigger: CGCGGAACCGGGTGGGGAGGCCAGGGAGGTAACCAAGAGTCCGAGCCGGGCCTGGAAATTCTGAGGAGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460670.5
ENST00000463910.1
CDS GCA 72 bp TGGAGGCAGAAGCCCCAGGCCTGTGTGCAAGTCACCTaGTGGGGAGGGAGACTGTGTGATTGTGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: WRQKPQACVQVT*WGGRLCDCVCV
Trigger: CACACAAACACAATCACACAGTCTCCCTCCCCAGCAGGTGACTTGCACACAGGCCTGGGGCTTCTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS TCA 72 bp TCCGTTGACCTGGTGTTCGTTTTCCATGTGGTGAGTTaGGGTGACCCGGGTCTGGATGCGAGAAGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: SVDLVFVFHVVS*GDPGLDARRAH
Trigger: GTGAGCTCTTCTCGCATCCAGACCCGGGTCACCTCAACTCACCACATGGAAAACGAACACCAGGTCAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423582.5
CDS TCA 72 bp CTCATGCCACTTGCCTGCCTCAGCCTAATCTGGCCCTaGCTGAAGACTAATTTCATGGAAGCAAATCCCAAT +
Preference number: 6 (lower is better)
Translates to: LMPLACLSLIWP*LKTNFMEANPN
Trigger: ATTGGGATTTGCTTCCATGAAATTAGTCTTCAGTCAGGGCCAGATTAGGCTGAGGCAGGCAAGTGGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460384.1
ENST00000463910.1
CDS CAA 90 bp CAACTGCTCCTACATGACCACCATTACAACAGAGATGGTCGTAAATaGGCTGTAGAGTGGAAAAGATACAGGCATTTTATCTGCATAGGC +
Preference number: 6 (lower is better)
Translates to: QLLLHDHHYNRDGRK*AVEWKRYRHFICIG
Trigger: GCCTATGCAGATAAAATGCCTGTATCTTTTCCACTCTACAGCCAATTTACGACCATCTCTGTTGTAATGGTGGTCATGTAGGAGCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS CAA 90 bp TGGTTGATGAATATGAGGGGTCTAGAATGCCTGTCTTGGTATTCTTaGAACTTCACTAAGACATCTTCAGTTTTCCCATCTTCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: WLMNMRGLECLSWYS*NFTKTSSVFPSSSR
Trigger: CCTAGAAGAAGATGGGAAAACTGAAGATGTCTTAGTGAAGTTCAAAGAATACCAAGACAGGCATTCTAGACCCCTCATATTCATCAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000439428.5
ENST00000590785.1
CDS TCA 72 bp CATACTCTAGTTCATCCTGAAGTGATCGGAAATGTGTaGGAACTAGATATTGGAGACCTAGTACTGACAATG +
Preference number: 6 (lower is better)
Translates to: HTLVHPEVIGNV*ELDIGDLVLTM
Trigger: CATTGTCAGTACTAGGTCTCCAATATCTAGTTCTCACACATTTCCGATCACTTCAGGATGAACTAGAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS CAA 72 bp CTACATGACCACCATTACAACAGAGATGGTCGTAAATaGGCTGTAGAGTGGAAAAGATACAGGCATTTTATC +
Preference number: 6 (lower is better)
Translates to: LHDHHYNRDGRK*AVEWKRYRHFI
Trigger: GATAAAATGCCTGTATCTTTTCCACTCTACAGCCAATTTACGACCATCTCTGTTGTAATGGTGGTCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1
CDS TCA 72 bp CTTTTCCATAAGATTACTTGGATGGACACTGAGGCTTaGCTTTTCTATGAAGGCAATTCCATCTTTATTGTA +
Preference number: 6 (lower is better)
Translates to: LFHKITWMDTEA*LFYEGNSIFIV
Trigger: TACAATAAAGATGGAATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCATCCAAGTAATCTTATGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292928.7
ENST00000423582.5
ENST00000435416.1
ENST00000439428.5
CDS CAA 72 bp TTTGTACTCCGAGGCTTCATTGAGGACATAAAAGTTTaGTACTCACAACGAATTTGTTTTGTAGGAATACAG +
Preference number: 6 (lower is better)
Translates to: FVLRGFIEDIKV*YSQRICFVGIQ
Trigger: CTGTATTCCTACAAAACAAATTCGTTGTGAGTACAAAACTTTTATGTCCTCAATGAAGCCTCGGAGTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435416.1