RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF366 (Homo sapiens)

Ensembl gene IDs: ENSG00000178175

Ensembl transcript IDs: ENST00000318442.6, ENST00000414109.2, ENST00000514477.5

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGTCACACGTACACGACACCCAGTCAGTATTGCTTTTCTCAGTaGCAGTGCCTAAGTAAGTCTGACCTGCTGGGCCCATCCCACCCA +
Preference number: 1 (lower is better)
Translates to: GSHTYTTPSQYCFSQ*QCLSKSDLLGPSHP
Trigger: TGGGTGGGATGGGCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 90 bp CACACGTACACGACACCCAGTCAGTATTGCTTTTCTCAGTGCCAGTaGCTAAGTAAGTCTGACCTGCTGGGCCCATCCCACCCAATAGAG +
Preference number: 1 (lower is better)
Translates to: HTYTTPSQYCFSQCQ*LSKSDLLGPSHPIE
Trigger: CTCTATTGGGTGGGATGGGCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGTGTACGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 90 bp GTTATTGCTATGGGCAGTCACACGTACACGACACCCAGTCAGTATTaGTTTTCTCAGTGCCAGTGCCTAAGTAAGTCTGACCTGCTGGGC +
Preference number: 1 (lower is better)
Translates to: VIAMGSHTYTTPSQY*FSQCQCLSKSDLLG
Trigger: GCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCCCATAGCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp CAGCACCTTGGCCTACAGAAAAGGCCAGCCCCCAGCAGTTGGAGATaGACATGTCTTCTAAAGGAATGTACTGGGAAATCTGGGATAGGA +
Preference number: 1 (lower is better)
Translates to: QHLGLQKRPAPSSWR*TCLLKECTGKSGIG
Trigger: TCCTATCCCAGATTTCCCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGCCTTTTCTGTAGGCCAAGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp AGACCCCAAGAGCTGGAAGCCTCCCAGGCCACACTGCCAGCATCCTaGGCAATTTCATCAGAGGCACTGATGAGCTATATTAATACTGAA +
Preference number: 1 (lower is better)
Translates to: RPQELEASQATLPAS*AISSEALMSYINTE
Trigger: TTCAGTATTAATATAGCTCATCAGTGCCTCTGATGAAATTGCCCAGGATGCTGGCAGTGTGGCCTGGGAGGCTTCCAGCTCTTGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp TCCTTCAAGGCTTGCCTTCTGGTTCATCAGCTCATTAGGCAAGGCTaGCCAACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCA +
Preference number: 1 (lower is better)
Translates to: SFKACLLVHQLIRQG*PTLPLTLCSCIKCP
Trigger: TGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGTTGGCCAGCCTTGCCTAATGAGCTGATGAACCAGAAGGCAAGCCTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 90 bp ATGAAGACCCTGCACATGTGTGAAGGGTATCAAGGGCCCCGTGAATaGCCTGAGAAGGCTTTCCATTACCTACATCCCTGCTCATTTAGT +
Preference number: 1 (lower is better)
Translates to: MKTLHMCEGYQGPRE*PEKAFHYLHPCSFS
Trigger: ACTAAATGAGCAGGGATGTAGGTAATGGAAAGCCTTCTCAGGTCATTCACGGGGCCCTTGATACCCTTCACACATGTGCAGGGTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 90 bp TTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTCTaGGATGGCCCACATGGACTCTCCTTCAAGGCTTGCCTTCTGGTT +
Preference number: 1 (lower is better)
Translates to: FWNAGNLGRLHPLVL*DGPHGLSFKACLLV
Trigger: AACCAGAAGGCAAGCCTTGAAGGAGAGTCCATGTGGGCCATCTCAGAGAACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp TGGGCAATTTCATCAGAGGCACTGATGAGCTATATTAATACTGAATaGAAGGGACTTGCCCCTCTGAGGACTTGGAATGGGTTTTTGACC +
Preference number: 1 (lower is better)
Translates to: WAISSEALMSYINTE*KGLAPLRTWNGFLT
Trigger: GGTCAAAAACCCATTCCAAGTCCTCAGAGGGGCAAGTCCCTTCCATTCAGTATTAATATAGCTCATCAGTGCCTCTGATGAAATTGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp AGCCCCCAGCAGTTGGAGATGGACATGTCTTCTAAAGGAATGTACTaGGAAATCTGGGATAGGATGAAGCACAATAATAACCAGTACCTA +
Preference number: 1 (lower is better)
Translates to: SPQQLEMDMSSKGMY*EIWDRMKHNNNQYL
Trigger: TAGGTACTGGTTATTATTGTGCTTCATCCTATCCCAGATTTCCCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp AGCTATATTAATACTGAATGGAAGGGACTTGCCCCTCTGAGGACTTaGAATGGGTTTTTGACCCAGAGTTGTGCTTGTAACCACAGAAAC +
Preference number: 1 (lower is better)
Translates to: SYINTEWKGLAPLRT*NGFLTQSCACNHRN
Trigger: GTTTCTGTGGTTACAAGCACAACTCTGGGTCAAAAACCCATTCCAAGTCCTCAGAGGGGCAAGTCCCTTCCATTCAGTATTAATATAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp TTGTTTTGGTTGGAAAGGACTAGAGCCTGTTACTCTAGAATTTCCTaGTTTCCATTCCAGCCAGGCATACTCAGAACCAAACGGCATTCT +
Preference number: 1 (lower is better)
Translates to: LFWLERTRACYSRIS*FPFQPGILRTKRHS
Trigger: AGAATGCCGTTTGGTTCTGAGTATGCCTGGCTGGAATGGAAACCAGGAAATTCTAGAGTAACAGGCTCTAGTCCTTTCCAACCAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp AGAAGTTTTTACATAAACAGACACAGTACCAGAGGGTTATTGCTATaGGCAGTCACACGTACACGACACCCAGTCAGTATTGCTTTTCTC +
Preference number: 1 (lower is better)
Translates to: RSFYINRHSTRGLLL*AVTRTRHPVSIAFL
Trigger: GAGAAAAGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCCCATAGCAATAACCCTCTGGTACTGTGTCTGTTTATGTAAAAACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp CTTTCTCATGCAACTACTCATATACAAATATACCAGTTACTCTTGTaGGTTTATGAAAGGTCAGCCTTAGTCTCATGGCCGGTGGGGAGT +
Preference number: 1 (lower is better)
Translates to: LSHATTHIQIYQLLL*VYERSALVSWPVGS
Trigger: ACTCCCCACCGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGAGTAGTTGCATGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 90 bp TGCAACTACTCATATACAAATATACCAGTTACTCTTGTGGGTTTATaGAAGGTCAGCCTTAGTCTCATGGCCGGTGGGGAGTCAAATTTT +
Preference number: 1 (lower is better)
Translates to: CNYSYTNIPVTLVGL*KVSLSLMAGGESNF
Trigger: AAAATTTGACTCCCCACCGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGAGTAGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp CAGTTGGAGATGGACATGTCTTCTAAAGGAATGTACTGGGAAATCTaGGATAGGATGAAGCACAATAATAACCAGTACCTAGCTCTACAA +
Preference number: 1 (lower is better)
Translates to: QLEMDMSSKGMYWEI*DRMKHNNNQYLALQ
Trigger: TTGTAGAGCTAGGTACTGGTTATTATTGTGCTTCATCCTATCCCAGATTTCCCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 90 bp AACATTAACTGGTCCCTCAAACATTCCCATGAGGTTTGTTTTGGTTaGAAAGGACTAGAGCCTGTTACTCTAGAATTTCCTGGTTTCCAT +
Preference number: 1 (lower is better)
Translates to: NINWSLKHSHEVCFG*KGLEPVTLEFPGFH
Trigger: ATGGAAACCAGGAAATTCTAGAGTAACAGGCTCTAGTCCTTTCCAACCAAAACAAACCTCATGGGAATGTTTGAGGGACCAGTTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCAGCCTCCCGAGTAGCTaGAACTACAGGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: HGRSVNKCVTRPQELEASSLPSS*NYRLLP
Trigger: TGGCAGGAGCCTGTAGTTCCAGCTACTCGGGAGGCT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTaGTCTGAGGAGCCAGGGCCCCAAACATCATCATATCATCTGAAA +
Preference number: 2 (lower is better)
Translates to: TAMVSRREPCSRSEG*SEEPGPQTSSYHLK
Trigger: TTTCAGATGATATGATGATGTTTGGGGCCCTGGCTCCTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCCCAGCCCCCAGCAGTTaGAGATGGACATGTCTTCTA +
Preference number: 2 (lower is better)
Translates to: HGRSVNKCVTRPQELEASPAPSS*RWTCLL
Trigger: TAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGG...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCTTTTCTCAGTGCCAGTaGCTAAGTAAGTCTGACCTG +
Preference number: 2 (lower is better)
Translates to: HGRSVNKCVTRPQELEASFSQCQ*LSKSDL
Trigger: CAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAA...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTGACCCTGCACATGTGTaGAGGGTATCAAGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSDPAHV*RVSRAP
Trigger: CGGGGCCCTTGATACCCTTCACACATGTGCAGGGTC...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCATCTGCAGCAACTACTaGAGAGCATTCTCTTCAATA +
Preference number: 2 (lower is better)
Translates to: HGRSVNKCVTRPQELEASICSNY*RAFSSI
Trigger: TATTGAAGAGAATGCTCTCCAGTAGTTGCTGCAGAT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCAGGTGGCAGGGGAAATaGGTCAGAGATGGACACAAC +
Preference number: 2 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPRWQGK*VRDGHN
Trigger: GTTGTGTCCATCTCTGACCCATTTCCCCTGCCACCT...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACCAGACCCCAAGAGCTaGAAGCCTCCCAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIPDPKS*KPPRPH
Trigger: GTGTGGCCTGGGAGGCTTCCAGCTCTTGGGGTCTGG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCAAGGGCCCCGTGAATaGCCTGAGAAGGCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVQGPRE*PEKAFH
Trigger: ATGGAAAGCCTTCTCAGGTCATTCACGGGGCCCTTG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTGTCTTATGGGGCATaGGGCCTCAGAGCAAGACAG +
Preference number: 2 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVLSYGA*GLRARQ
Trigger: CTGTCTTGCTCTGAGGCCTCATGCCCCATAAGACAG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACCCCCTGGTCACTGGTaGCAAGTCTTCCTGCATCTG +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIPPGHW*QVFLHL
Trigger: CAGATGCAGGAAGACTTGTCACCAGTGACCAGGGGG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTCATTACCTACATCCCTaGTCATTTAGTCTAAGCCAT +
Preference number: 2 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPHYLHP*SFSLSH
Trigger: ATGGCTTAGACTAAATGAGCAGGGATGTAGGTAATG...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCGTACCAGAGGGTTATTaGTATGGGCAGTCACACGTA +
Preference number: 2 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPVPEGY*YGQSHV
Trigger: TACGTGTGACTGCCCATAGCAATAACCCTCTGGTAC...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTCATGGTTCAAGCATCTaGGAAGAAATAATGAGTCAC +
Preference number: 2 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPHGSSI*EEIMSH
Trigger: GTGACTCATTATTTCTTCCCAGATGCTTGAACCATG...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTGCTTGGAGTGAGGTaGGTGTGGGAGTTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVLLGVR*VWELRA
Trigger: AGCTCTCAACTCCCACACCCACCTCACTCCAAGCAG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 90 bp GAGCTTTCTCATGCAACTACTCATATACAAATATACCAGTTACTCTaGTGGGTTTATGAAAGGTCAGCCTTAGTCTCATGGCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ELSHATTHIQIYQLL*WVYERSALVSWPVG
Trigger: CCCCACCGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGAGTAGTTGCATGAGAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACCTGCATCTGTCTTATaGGGCATGAGGCCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIPASVL*GMRPQS
Trigger: GCTCTGAGGCCTCATGCCCCATAAGACAGATGCAGG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 90 bp CAAACAAGAAGTTTTTACATAAACAGACACAGTACCAGAGGGTTATaGCTATGGGCAGTCACACGTACACGACACCCAGTCAGTATTGCT +
Preference number: 2 (lower is better)
Translates to: QTRSFYINRHSTRGL*LWAVTRTRHPVSIA
Trigger: AGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCCCATAGCAATAACCCTCTGGTACTGTGTCTGTTTATGTAAAAACTTCTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACTTCACAATCTCCGTTaGAGGTGCCCTTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLILHNLR*RCPYLR
Trigger: CCTGAGGTAAGGGCACCTGCAACGGAGATTGTGAAG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATTCAAACGATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLFKRFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATCGTTTGAA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTGCCATTTGTAGAGATTaGTACTATTCGCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVAICRD*YYSPVS
Trigger: GGAGACTGGCGAATAGTACCAATCTCTACAAATGGC...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCCAATCTTCTCAATCTTaGCTGCACATAAGAATTGCC +
Preference number: 2 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPQSSQS*LHIRIA
Trigger: GGCAATTCTTATGTGCAGCCAAGATTGAGAAGATTG...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTAGATGGACACAACACATaGGTGAGTGATGACAACCAG +
Preference number: 2 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVDGHNT*VSDDNQ
Trigger: CTGGTTGTCATCACTCACCCATGTGTTGTGTCCATC...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAAAATCAGATGGAACTTaGGCTGCTTGGAGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLKSDGT*AAWSEV
Trigger: CACCTCACTCCAAGCAGCTCAAGTTCCATCTGATTT...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR GCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAACACCCAGTCAGTATTaGTTTTCTCAGTGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLITPSQY*FSQCQC
Trigger: GCACTGGCACTGAGAAAAGCAATACTGACTGGGTGT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTAGTCATTTCCACTCACTaGCATCATGGTTCAAGCATC +
Preference number: 2 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVVISTH*HHGSSI
Trigger: GATGCTTGAACCATGATGCCAGTGAGTGGAAATGAC...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCCCAGCAGTTGGAGATaGACATGTCTTCTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVPSSWR*TCLLKE
Trigger: TTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACTTAGTTCTCTGAGATaGCCCACATGGACTCTCCTT +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLILSSLR*PTWTLL
Trigger: AAGGAGAGTCCATGTGGGCCATCTCAGAGAACTAAG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTACCTCAAACATTCCCATaGGGTTTGTTTTGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLPQTFP*GLFWLE
Trigger: TTCCAACCAAAACAAACCTCATGGGAATGTTTGAGG...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATATATATTAATACTGAATaGAAGGGACTTGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIYINTE*KGLAPL
Trigger: CAGAGGGGCAAGTCCCTTCCATTCAGTATTAATATA...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR TCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAAAATCTGGGATAGGATaGAGCACAATAATAACCAGT +
Preference number: 2 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLKSGIG*STIITS
Trigger: ACTGGTTATTATTGTGCTTCATCCTATCCCAGATTT...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 72 bp GGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTaGTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GWGHTALGLMGS*LTGLPPKCSRL
Trigger: CAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
3UTR-3UTR CAA 90 bp CAGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCAGGCTGCGGTAGAATaGGAAGCCCACGTTGCACAG +
Preference number: 3 (lower is better)
Translates to: QEWSGRWLGPHGAGLNGFQAAVE*EAHVAQ
Trigger: CTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTG...GAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514477.5
3UTR GCA 72 bp CAGAGCAAGACAGCAATGGTCTCCAGGAGGGAGCCGTaGTCGAGAAGTGAGGGTTTGTCTGAGGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QSKTAMVSRREP*SRSEGLSEEPG
Trigger: CCCTGGCTCCTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGTCTTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp GTGATCTCAGCTCAGCTCACTGCAATCTCCACTGCCTaGGTTCAAACGATTCTCCTGCTTCAGCCTCCCGAG +
Preference number: 3 (lower is better)
Translates to: VISAQLTAISTA*VQTILLLQPPE
Trigger: CTCGGGAGGCTGAAGCAGGAGAATCGTTTGAACCCAGGCAGTGGAGATTGCAGTGAGCTGAGCTGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp TGGCAGGGGAAATGGGTCAGAGATGGACACAACACATaGGTGAGTGATGACAACCAGGTGGGGCTAATGGGG +
Preference number: 3 (lower is better)
Translates to: WQGKWVRDGHNT*VSDDNQVGLMG
Trigger: CCCCATTAGCCCCACCTGGTTGTCATCACTCACCCATGTGTTGTGTCCATCTCTGACCCATTTCCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp ATGGCCCACATGGACTCTCCTTCAAGGCTTGCCTTCTaGTTCATCAGCTCATTAGGCAAGGCTGGCCAACCC +
Preference number: 3 (lower is better)
Translates to: MAHMDSPSRLAF*FISSLGKAGQP
Trigger: GGGTTGGCCAGCCTTGCCTAATGAGCTGATGAACCAGAAGGCAAGCCTTGAAGGAGAGTCCATGTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTTCGAGAAGTGAGGGTTaGTCTGAGGAGCCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPSRSEG*SEEPGP
Trigger: GGGCCCTGGCTCCTCAGACAAACCCTCACTTCTCGA...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 72 bp ACGACACCCAGTCAGTATTGCTTTTCTCAGTGCCAGTaGCTAAGTAAGTCTGACCTGCTGGGCCCATCCCAC +
Preference number: 3 (lower is better)
Translates to: TTPSQYCFSQCQ*LSKSDLLGPSH
Trigger: GTGGGATGGGCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp CTGCACATGTGTGAAGGGTATCAAGGGCCCCGTGAATaGCCTGAGAAGGCTTTCCATTACCTACATCCCTGC +
Preference number: 3 (lower is better)
Translates to: LHMCEGYQGPRE*PEKAFHYLHPC
Trigger: GCAGGGATGTAGGTAATGGAAAGCCTTCTCAGGTCATTCACGGGGCCCTTGATACCCTTCACACATGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 72 bp ACGTACACGACACCCAGTCAGTATTGCTTTTCTCAGTaGCAGTGCCTAAGTAAGTCTGACCTGCTGGGCCCA +
Preference number: 3 (lower is better)
Translates to: TYTTPSQYCFSQ*QCLSKSDLLGP
Trigger: TGGGCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGTGTACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp CACCTTGGCCTACAGAAAAGGCCAGCCCCCAGCAGTTaGAGATGGACATGTCTTCTAAAGGAATGTACTGGG +
Preference number: 3 (lower is better)
Translates to: HLGLQKRPAPSS*RWTCLLKECTG
Trigger: CCCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGCCTTTTCTGTAGGCCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp GCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTCTaGGATGGCCCACATGGACTCTCCTTCAAGGCTTGC +
Preference number: 3 (lower is better)
Translates to: AGNLGRLHPLVL*DGPHGLSFKAC
Trigger: GCAAGCCTTGAAGGAGAGTCCATGTGGGCCATCTCAGAGAACTAAGGGATGAAGCCTTCCAAGATTACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp ATAAATCAGATGGAACTTGAGCTGCTTGGAGTGAGGTaGGTGTGGGAGTTGAGAGCTTCTCCTCCCCTTACC +
Preference number: 3 (lower is better)
Translates to: INQMELELLGVR*VWELRASPPLT
Trigger: GGTAAGGGGAGGAGAAGCTCTCAACTCCCACACCCACCTCACTCCAAGCAGCTCAAGTTCCATCTGATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp GCTTGCCTTCTGGTTCATCAGCTCATTAGGCAAGGCTaGCCAACCCTTCCCTTAACTCTGTGCTCTTGCATA +
Preference number: 3 (lower is better)
Translates to: ACLLVHQLIRQG*PTLPLTLCSCI
Trigger: TATGCAAGAGCACAGAGTTAAGGGAAGGGTTGGCCAGCCTTGCCTAATGAGCTGATGAACCAGAAGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 72 bp ATGGGCAGTCACACGTACACGACACCCAGTCAGTATTaGTTTTCTCAGTGCCAGTGCCTAAGTAAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: MGSHTYTTPSQY*FSQCQCLSKSD
Trigger: GTCAGACTTACTTAGGCACTGGCACTGAGAAAAGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp GGCCTACAGAAAAGGCCAGCCCCCAGCAGTTGGAGATaGACATGTCTTCTAAAGGAATGTACTGGGAAATCT +
Preference number: 3 (lower is better)
Translates to: GLQKRPAPSSWR*TCLLKECTGKS
Trigger: AGATTTCCCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGCCTTTTCTGTAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCAGGGGTTTTGCCACGTaGGCCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPRGFAT*ARLVSN
Trigger: GTTTGAGACCAACCTGGCCAACGTGGCAAAACCCCT...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCTGCCCCTCTGAGGACTaGGAATGGGTTTTTGACCCA +
Preference number: 3 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPCPSED*EWVFDP
Trigger: TGGGTCAAAAACCCATTCCAAGTCCTCAGAGGGGCA...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGCCAGCCCCCAGCAGTaGGAGATGGACATGTCTTCT +
Preference number: 3 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVASPQQ*EMDMSS
Trigger: AGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR GCA 72 bp CAAGGCTGGCCAACCCTTCCCTTAACTCTGTGCTCTTaGATAAAGTGTCCATGTAATTTCTCACCCAAACTG +
Preference number: 3 (lower is better)
Translates to: QGWPTLPLTLCS*IKCPCNFSPKL
Trigger: CAGTTTGGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGTTGGCCAGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp TCATATACAAATATACCAGTTACTCTTGTGGGTTTATaGAAGGTCAGCCTTAGTCTCATGGCCGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: SYTNIPVTLVGL*KVSLSLMAGGE
Trigger: CTCCCCACCGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp TTGGAAAGGACTAGAGCCTGTTACTCTAGAATTTCCTaGTTTCCATTCCAGCCAGGCATACTCAGAACCAAA +
Preference number: 3 (lower is better)
Translates to: LERTRACYSRIS*FPFQPGILRTK
Trigger: TTTGGTTCTGAGTATGCCTGGCTGGAATGGAAACCAGGAAATTCTAGAGTAACAGGCTCTAGTCCTTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp CTGAGGAGCCAGGGCCCCAAACATCATCATATCATCTaGAAAATAATGCTCCAAATGCTCAATCTGATGAAG +
Preference number: 3 (lower is better)
Translates to: LRSQGPKHHHII*KIMLQMLNLMK
Trigger: CTTCATCAGATTGAGCATTTGGAGCATTATTTTTCAGATGATATGATGATGTTTGGGGCCCTGGCTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp AGGTCACCCCAGATGCTTCTAATGTACAGCCAGCACTaGAAACACAGTCCAGAGTCTTCTTTACTAATGATT +
Preference number: 3 (lower is better)
Translates to: RSPQMLLMYSQH*KHSPESSLLMI
Trigger: AATCATTAGTAAAGAAGACTCTGGACTGTGTTTTCAGTGCTGGCTGTACATTAGAAGCATCTGGGGTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp GCAACTACTCATATACAAATATACCAGTTACTCTTGTaGGTTTATGAAAGGTCAGCCTTAGTCTCATGGCCG +
Preference number: 3 (lower is better)
Translates to: ATTHIQIYQLLL*VYERSALVSWP
Trigger: CGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGAGTAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTAATTGCCAGGAGCAATTaGGAAAATTTCAGTCCTAGG +
Preference number: 3 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVIARSN*ENFSPR
Trigger: CCTAGGACTGAAATTTTCCAAATTGCTCCTGGCAAT...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR TCA 72 bp TGTAGAGATTGGTACTATTCGCCAGTCTCCAGAAAATaGCAGTTCATGCAGAAAGCTATATTTGAACTGCCT +
Preference number: 3 (lower is better)
Translates to: CRDWYYSPVSRK*QFMQKAIFELP
Trigger: AGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTGGCGAATAGTACCAATCTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CCA 72 bp ATGGACATGTCTTCTAAAGGAATGTACTGGGAAATCTaGGATAGGATGAAGCACAATAATAACCAGTACCTA +
Preference number: 3 (lower is better)
Translates to: MDMSSKGMYWEI*DRMKHNNNQYL
Trigger: TAGGTACTGGTTATTATTGTGCTTCATCCTATCCCAGATTTCCCAGTACATTCCTTTAGAAGACATGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR-3UTR CAA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAATATACCAGTTACTCTaGTGGGTTTATGAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIIYQLL*WVYERS
Trigger: TGACCTTTCATAAACCCACAAGAGTAACTGGTATAT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp GGGCAGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGGGAGTGGGCGTTGGCTaGGGCCACACGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQEWSGRWLGPHGAGLNGGVGVG*GHTALG
Trigger: GCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCC...CCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp GGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCGGGCGTGGGCAGGAATaGAGTGGGCGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GVGWGHTALGLMGSCLTGGRGQE*SGRWLG
Trigger: CCCCAGCCAACGCCCACTCCATTCCTGCCCACGCCC...GCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp GGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCGAATGGAGTGGGCGTTaGCTGGGGCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: GWGHTALGLMGSCLTGLPEWSGR*LGPHGA
Trigger: AGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTC...GGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp GGGCAGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGCTCCTGAGGTCTGAATaGCTGCAGCAGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: GQEWSGRWLGPHGAGLNGLLRSE*LQQPHS
Trigger: GGAGTGGGGCTGCTGCAGCCATTCAGACCTCAGGAG...CCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
3UTR CAA 72 bp TGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTaGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WGHTALGLMGSC*TGLPPKCSRLR
Trigger: CCGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp AGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGGGCAGGAATGGAGTaGGCGTTGGCTGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: RNGVGVGWGHTALGLMGSWAGME*ALAGAT
Trigger: TGTGGCCCCAGCCAACGCCCACTCCATTCCTGCCCA...GGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp GGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCTCTGAGAGTCATACTTaGGGCGCGGGGGCGAAACTG +
Preference number: 4 (lower is better)
Translates to: GWGHTALGLMGSCLTGLPSESHT*GAGAKL
Trigger: CAGTTTCGCCCCCGCGCCCCAAGTATGACTCTCAGA...GGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR TCA 90 bp CTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCCACAGGTCGATCATCTaGGAGTCATACTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LGPHGAGLNGFLLDGLAPHRSII*ESYLGR
Trigger: GCGCCCCAAGTATGACTCTCAGATGATCGACCTGTG...GGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGCAGAGCTGCTGGCTCTaGGGGGCCAGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEQSCWL*GARPGL
Trigger: CAGCCCTGGCCTGGCCCCCCAGAGCCAGCAGCTCTG...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGGCCCCGGTGCGTGGTaGGGTGTCTCTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEGPGAW*GVSSAG
Trigger: CCCAGCTGAAGAGACACCTCACCACGCACCGGGGCC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGTCGCAGGTGGGGCACTaGCAGCGCTTCTGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSESQVGH*QRFCEP
Trigger: CGGCTCGCAGAAGCGCTGGCAGTGCCCCACCTGCGA...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCGGGAAGGGGTGTCTTTaGGGAGCCTTTCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: QEWSGRWLGPHGAGLNGFGKGCL*GAFPRE
Trigger: TTCTCGGGGAAAGGCTCCCCAAAGACACCCCTTCCC...GAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCGGAGTGGGCGTTGGCTaGGGCCACACGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASGVGVG*GHTALG
Trigger: GCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCC...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp GGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGCGCGGGGGCGAAACTaGGAAAATGGCCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GLNGFLLDGLAPKVFQAAARGRN*ENGPRR
Trigger: TCTCCGAGGGCCATTTTCCCAGTTTCGCCCCCGCGC...CGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR GCA 90 bp GGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGATTGGAAGCCCACGTTaGACAGGTCGATCATCTGAG +
Preference number: 4 (lower is better)
Translates to: GRWLGPHGAGLNGFLLDGIGSPR*TGRSSE
Trigger: CTCAGATGATCGACCTGTGCAACGTGGGCTTCCAAT...CCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR GCA 90 bp CTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCCAAAGTGTTCCAGGCTaGGGTAGAATTGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGPHGAGLNGFLLDGLAPQSVPG*GRIGSP
Trigger: TGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTG...GGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR TCA 90 bp GGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGTAGAATTGGAAGCCCACGTTGCATCAGCTCCTGAGGTCTaGATGGCTGCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLAPKVFQAAVELEAHVASAPEV*MAAAAP
Trigger: TGGGGCTGCTGCAGCCATTCAGACCTCAGGAGCTGA...TGCAACGTGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTGGGGGCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR GCA 90 bp GGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGGCTTAATGGGTTCCTaGTTGACGGGCTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GLNGFLLDGLAPKVFQAAGLMGS*LTGLPP
Trigger: TGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCC...CGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCGGGCGTGGGCAGGAATaGAGTGGGCGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASGRGQE*SGRWLG
Trigger: CCCCAGCCAACGCCCACTCCATTCCTGCCCACGCCC...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGGAACACCGGCACCTTaGCCCGGCGCTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEGTPAP*PGASER
Trigger: TCTCTCAGAAGCGCCGGGCCAAGGTGCCGGTGTTCC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGCCCAGACCTTGGGAATaGAGGCCCCGCTCCATGACT +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEPRPWE*RPRSMT
Trigger: AGTCATGGAGCGGGGCCTTCATTCCCAAGGTCTGGG...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp GGGCGTGGGCAGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTATCTTCATTTCCTTCTaGATCCTTGGCAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRGQEWSGRWLGPHGAGLIFISF*ILGNFP
Trigger: GGGAAAATTGCCAAGGATGCAGAAGGAAATGAAGAT...AAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCTGCCCACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCTCCTCCTCGTGGCAGTaGCTGCCCTGGGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASSSSWQ*LPWALS
Trigger: GGAGAGTGCCCAGGGCAGCCACTGCCACGAGGAGGA...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp GACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGTAGAATTGGAAGCCCACGTTGCGAAACTGGGAAAATaGCCCTCGGAGAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: DGLAPKVFQAAVELEAHVAKLGK*PSESFR
Trigger: CCGGAAGCTCTCCGAGGGCCATTTTCCCAGTTTCGC...AACGTGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTGGGGGCAAGCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR TCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGCCCCCTGGTCACTGGTaGCAAGTCTTCCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEPPGHW*QVFLHL
Trigger: CAGATGCAGGAAGACTTGTCACCAGTGACCAGGGGG...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGGCTTCACCTCGCTGTaGTGCATCATGTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEGFTSL*CIMWRF
Trigger: GAAGCGCCACATGATGCAGCACAGCGAGGTGAAGCC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGCCGAAACTGGGAAAATaGCCCTCGGAGAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEPKLGK*PSESFR
Trigger: CCGGAAGCTCTCCGAGGGCCATTTTCCCAGTTTCGG...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCGGGCGTGCTCCGACTTaGTGGACAGATCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASGRAPT*WTDPRV
Trigger: CACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCC...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTCTCCTGGCCGCCCTCTaGCCCAAGGTCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPLLAAL*PKVTLA
Trigger: AGCAAGGGTGACCTTGGGGCAGAGGGCGGCCAGGAG...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCATTCCTTCTGCATCCTTaGCAATTTTCCCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: WGHTALGLMGSCLTGLPPFLLHP*QFSLKI
Trigger: GATCTTCAGGGAAAATTGCCAAGGATGCAGAAGGAA...TGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514477.5
3UTR CAA 72 bp GTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTaGTCTGAGGAGCCAGGGCCCCAAACATCATCATAT +
Preference number: 4 (lower is better)
Translates to: VSRREPCSRSEG*SEEPGPQTSSY
Trigger: ATATGATGATGTTTGGGGCCCTGGCTCCTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTAGAGGTTCCGGGGGCTaGTTGGGCAGGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPRGSGG*LGRKVC
Trigger: GCACACCTTCCTGCCCAAGCAGCCCCCGGAACCTCT...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGATTGGAAGCCCACGTTaGACAGGTCGATCATCTGAG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEIGSPR*TGRSSE
Trigger: CTCAGATGATCGACCTGTGCAACGTGGGCTTCCAAT...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCTTCACCTCGCTGTGCTaGATCATGTGGCGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASFTSLC*IMWRFR
Trigger: CCTGAAGCGCCACATGATGCAGCACAGCGAGGTGAA...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGGTTCATACCGAAACTaGGAAAATGGCCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEGSYRN*ENGPRR
Trigger: TCTCCGAGGGCCATTTTCCCAGTTTCGGTATGAACC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCAATGGGGCAGCACCTTaGCCTACAGAAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASNGAAP*PTEKAS
Trigger: GCTGGCCTTTTCTGTAGGCCAAGGTGCTGCCCCATT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGTAGAATTGGAAGCCACAGCCAAGTCGAAATaGACATCCTCGTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: LLDGLAPKVFQAAVELEATAKSK*TSSSLI
Trigger: GATCAAAGACGAGGATGTGCATTTCGACTTGGCTGT...GGCTTCCAATTCTACCGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTGGCTTAATGGGTTCCTaGTTGACGGGCTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPGLMGS*LTGLPP
Trigger: TGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCC...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGTATAGGGCATCTTTGTaGGCATGCTCTTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEYRASL*ACSSVS
Trigger: GGAAACGGAAGAGCATGCCCACAAAGATGCCCTATA...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 72 bp GCACCTTGGCCTACAGAAAAGGCCAGCCCCCAGCAGTaGGAGATGGACATGTCTTCTAAAGGAATGTACTGG +
Preference number: 4 (lower is better)
Translates to: APWPTEKASPQQ*EMDMSSKGMYW
Trigger: CCAGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGCCTTTTCTGTAGGCCAAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTGTCAGCATGTGGGTATaGAGGTGGCTGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPVSMWV*RWLSCL
Trigger: CAAGCAGCTCAGCCACCTGCATACCCACATGCTGAC...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTTTGAGGTGGTGCGGCTaGACAAACTCCATGCCACAC +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPLRWCG*TNSMPH
Trigger: GTGTGGCATGGAGTTTGTGCAGCCGCACCACCTCAA...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTGTCTCCTCGCTCTCCTaGGGCTCGGCTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVVSSLS*GSAFRG
Trigger: GCCCCGGAAAGCCGAGCCCCAGGAGAGCGAGGAGAC...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGTCATTTCCACTCACTaGCATCATGGTTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEVISTH*HHGSSI
Trigger: GATGCTTGAACCATGATGCCAGTGAGTGGAAATGAC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGGAAGGTGTGCCGGCTaGAGGGGAAGGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVGRCAG*RGRART
Trigger: CGTCCTCGCCCTTCCCCTTCAGCCGGCACACCTTCC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCTGTTGGCCAGCAGGGTaGACTCCCGCCCACAAATCC +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPCWPAG*TPAHKS
Trigger: GGATTTGTGGGCGGGAGTTCACCCTGCTGGCCAACA...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCACAGATCCTCGGGTGTaGAGAGCTGCTGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPTDPRV*RAAGSG
Trigger: CCCAGAGCCAGCAGCTCTGCACACCCGAGGATCTGT...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTGTTCCGGGGGCTGCTTaGGCAGGAAGGTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSVPGAA*AGRCAG
Trigger: GCCGGCACACCTTCCTGCCCAAGCAGCCCCCGGAAC...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTGGGGTTTTGCCACGTTaGCCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPGVLPR*PGWSQT
Trigger: AGTTTGAGACCAACCTGGCCAACGTGGCAAAACCCC...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTTGCACGCGTGCGGCTTaGTCCCACTGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVCTRAA*SHCGPG
Trigger: TCCTGGGCCACAGTGGGATCAAGCCGCACGCGTGCA...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTTTGGCCCGGCGCTTCTaGGAGAGGTCAAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLLARRF*ERSKGS
Trigger: GGAGCCCTTTGACCTCTCTCAGAAGCGCCGGGCCAA...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTGACACCGGCTGTCTGTaGCAGGGCGATTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCDTGCL*QGDSPP
Trigger: AGGGGGAGAATCGCCCTGGCACAGACAGCCGGTGTC...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATACCTCGTGGCAGTGGCTaGCCTGGGCACTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIPRGSG*PGHSPR
Trigger: ACGGGGAGAGTGCCCAGGGCAGCCACTGCCACGAGG...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCTCCAGGAGGGAGCCGTaGTCGAGAAGTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPSRREP*SRSEGL
Trigger: CAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGA...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGAATGGAGTGGGCGTTaGCTGGGGCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVEWSGR*LGPHGA
Trigger: AGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATGGCCCGGGTGGACTTTaGGGTAGTAGGGGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENGPGGL*GSRGRA
Trigger: CGCCCTACCCCTACTACCCCAAAGTCCACCCGGGCC...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGGCCGCGTGCCCTGGTaGGTCAGCATGTGGGTATGC +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVGRVPW*VSMWVC
Trigger: GCATACCCACATGCTGACCCACCAGGGCACGCGGCC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTTGTTCTCGCGCCCACTaGCGTGCTTGGCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCCSRAH*RAWLRG
Trigger: CCCACGAAGCCAAGCACGCCAGTGGGCGCGAGAACA...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTTCTCCCATTCTCCCTTaGATGCATCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPSPILP*MHPPSP
Trigger: AGGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGA...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATGCACAGTCTCTCTCCTaGCCGCCCTCTGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENAQSLS*PPSAPR
Trigger: CCTTGGGGCAGAGGGCGGCCAGGAGAGAGACTGTGC...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGATCTGCAGCAACTACTaGAGAGCATTCTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEICSNY*RAFSSI
Trigger: TATTGAAGAGAATGCTCTCCAGTAGTTGCTGCAGAT...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGTATATTAATACTGAATaGAAGGGACTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEYINTE*KGLAPL
Trigger: CAGAGGGGCAAGTCCCTTCCATTCAGTATTAATATA...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCCAGACCCCAAGAGCTaGAAGCCTCCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVPDPKS*KPPRPH
Trigger: GTGTGGCCTGGGAGGCTTCCAGCTCTTGGGGTCTGG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTAGTGGAGGGCGAGGGTaGCTTCTTCTGCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVSGGRG*LLLQGG
Trigger: ACCACCCTGCAGAAGAAGTCACCCTCGCCCTCCACT...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCCCCGCCGGGTACTCTaGAAAGCCCTGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVPRRVL*KALRLR
Trigger: TCTCAGTCTCAGGGCTTTTCAGAGTACCCGGCGGGG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTGACCCTGCACATGTGTaGAGGGTATCAAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCDPAHV*RVSRAP
Trigger: CGGGGCCCTTGATACCCTTCACACATGTGCAGGGTC...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTGGGCAGGAAGGTGTaGCGGCTGAAGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVLGRKV*RLKGKG
Trigger: GCCCTTCCCCTTCAGCCGGCACACCTTCCTGCCCAA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATATCGCGCCCACTGGCGTaGTTGGCTTCGTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLISRPLA*LASWAL
Trigger: CAAGGCCCACGAAGCCAAGCACGCCAGTGGGCGCGA...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATGGATGGGGCCCCGGTaGGTGGTGAGGTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVWMGPR*VVRCLF
Trigger: GAAGAGACACCTCACCACGCACCGGGGCCCCATCCA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCAGGCTCCTGCCATCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASRLLPS*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGATGGCAGGAGCCT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATCTGAGAGTCATACTTaGGGCGCGGGGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVSESHT*GAGAAG
Trigger: TCCCGCAGCCCCCGCGCCCCAAGTATGACTCTCAGA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATATGGGGCCGCGTGCCCTaGTGGGTCAGCATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIWGRVP*WVSMWV
Trigger: TACCCACATGCTGACCCACCAGGGCACGCGGCCCCA...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATCAGCTGGGCCAAGGTaGGGAAGTCGAGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVSAGPR*GSRGRT
Trigger: AGTGCGGCCTCGACTTCCCCACCTTGGCCCAGCTGA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATCGGAGCAGTTGTACTaGATGGGGCCCCGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVSEQLY*MGPRCV
Trigger: CACGCACCGGGGCCCCATCCAGTACAACTGCTCCGA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 72 bp CCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTaGCAGGTGCCCTTACCTCAGGACATAGTACTCTTA +
Preference number: 4 (lower is better)
Translates to: PQKPTVFSSQSP*QVPLPQDIVLL
Trigger: TAAGAGTACTATGTCCTGAGGTAAGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAGGCACTCTCCCCGTCTaGCTGGAACACCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIGTLPV*LEHRHL
Trigger: AAGGTGCCGGTGTTCCAGTCAGACGGGGAGAGTGCC...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTCTTGGAATGGGTTTTTaGCCCAGAGTTGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPLGMGF*PRVVLV
Trigger: TACAAGCACAACTCTGGGTCAAAAACCCATTCCAAG...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTGGTGGGTGTGGGAGTTaGGAGCTTCTCCTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLGGCGS*ELLLPL
Trigger: TAAGGGGAGGAGAAGCTCTCAACTCCCACACCCACC...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATCCGTTTCCTAGACCCTaGTCCTTCGAAGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENPFPRP*SFEDPG
Trigger: CCCGGGGTCTTCGAAGGAGCAGGGTCTAGGAAACGG...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTACCCTCTCCACCTTCTaGTTGGTCTCCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLTLSTF*LVSSLS
Trigger: GGAGAGCGAGGAGACCAAGCAGAAGGTGGAGAGGGT...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACAGTGCGTGCACGCGTaGGGCTTGATCCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIQCVHA*GLIPLW
Trigger: CCACAGTGGGATCAAGCCGCACGCGTGCACGCACTG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAAGCACCTCGGGGGCGTaGTCCGACTTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRISTSGA*SDLVDR
Trigger: TCTGTCCACCAAGTCGGAGCACGCCCCCGAGGTGCT...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTCCTGAGGTCTGAATaGCTGCAGCAGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVLLRSE*LQQPHS
Trigger: GGAGTGGGGCTGCTGCAGCCATTCAGACCTCAGGAG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATGGGCAGGAATGGAGTaGGCGTTGGCTGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLWAGME*ALAGAT
Trigger: TGTGGCCCCAGCCAACGCCCACTCCATTCCTGCCCA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTGAGTGCTGCTTGAGGTaGTGCGGCTGCACAAACTCC +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVECCLR*CGCTNS
Trigger: GGAGTTTGTGCAGCCGCACCACCTCAAGCAGCACTC...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTGCGCGGATGTTGGTGTaGATCAGCACGTGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCARMLV*ISTCRF
Trigger: GAAGCGACACGTGCTGATCCACACCAACATCCGCGC...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATCGTGCTCCGACTTGGTaGACAGATCCTCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENRAPTW*TDPRVC
Trigger: GCACACCCGAGGATCTGTCCACCAAGTCGGAGCACG...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTAGCCTCCCGAGTAGCTaGAACTACAGGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVSLPSS*NYRLLP
Trigger: TGGCAGGAGCCTGTAGTTCCAGCTACTCGGGAGGCT...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCCCTAAAGATGACCTCTaGCTTCTCAAAACACAATCT +
Preference number: 4 (lower is better)
Translates to: HGRSVNKCVTRPQELEASPKDDL*LLKTQS
Trigger: AGATTGTGTTTTGAGAAGCCAGAGGTCATCTTTAGG...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTCACAGGTCGATCATCTaGGAGTCATACTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLHRSII*ESYLGR
Trigger: GCGCCCCAAGTATGACTCTCAGATGATCGACCTGTG...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTCTCCATGCCACACTCTaGGCAGATGTAGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSLHATL*ADVGPD
Trigger: ATCCGGCCCTACATCTGCTCAGAGTGTGGCATGGAG...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCTGGCCCATCAGGTTGTaGATCCGGTTGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPWPIRL*IRLNSF
Trigger: GAAGGAATTCAACCGGATGCACAACCTGATGGGCCA...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTAGGTGTCTCTTCAGCTaGGCCAAGGTGGGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSRCLFS*AKVGKS
Trigger: CGACTTCCCCACCTTGGCCCAGCTGAAGAGACACCT...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTAGCTGGCTCGGGTACTaGAAGGTCTTGTCGCACTCG +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVSWLGY*KVLSHS
Trigger: CGAGTGCGACAAGACCTTCCAGTACCCGAGCCAGCT...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGTTTTTGTTCTCCTCTaGGTGGAGGGCGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVVFVLL*VEGEGD
Trigger: GTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAAC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTGACACAACACATGGGTaGGTGATGACAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVDTTHG*VMTTRW
Trigger: CCACCTGGTTGTCATCACTCACCCATGTGTTGTGTC...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCATCCCTTAGTTCTCTaGGATGGCCCACATGGACTC +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVHPLVL*DGPHGL
Trigger: GAGTCCATGTGGGCCATCTCAGAGAACTAAGGGATG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTTGTGCCTTGAGGGTCTaGTTCTGCACGAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCCALRV*FCTKLL
Trigger: CAAGAGCTTCGTGCAGAAGCAGACCCTCAAGGCACA...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTACTGTCTGAGTGCAGGTaGATGTGGCCCATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVLSECR*MWPIRL
Trigger: CAACCTGATGGGCCACATGCACCTGCACTCAGACAG...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTCCCCAAGGTCACCCTTaGTCCTCTTCTCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSPQGHP*SSSPIL
Trigger: GAGAATGGGAGAAGAGGAGCAAGGGTGACCTTGGGG...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTCTTCACAATCTCCGTTaGAGGTGCCCTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLLHNLR*RCPYLR
Trigger: CCTGAGGTAAGGGCACCTGCAACGGAGATTGTGAAG...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACCTCCCAGGCCACACTaGCAGCATCCTGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIPPRPH*QHPGQF
Trigger: AAATTGCCCAGGATGCTGGCAGTGTGGCCTGGGAGG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAGGGAAGGGGTGTCTTTaGGGAGCCTTTCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIGKGCL*GAFPRE
Trigger: TTCTCGGGGAAAGGCTCCCCAAAGACACCCCTTCCC...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCGATGGACACAACACATaGGTGAGTGATGACAACCAG +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPDGHNT*VSDDNQ
Trigger: CTGGTTGTCATCACTCACCCATGTGTTGTGTCCATC...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATGGAGTGAGGTGGGTGTaGGAGTTGAGAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENGVRWV*ELRASP
Trigger: AGGAGAAGCTCTCAACTCCCACACCCACCTCACTCC...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTCTGAGATGGCCCACATaGACTCTCCTTCAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLLRWPT*TLLQGL
Trigger: CAAGCCTTGAAGGAGAGTCCATGTGGGCCATCTCAG...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 72 bp CAATCTTGGCTGCACATAAGAATTGCCAGGAGCAATTaGGAAAATTTCAGTCCTAGGGCTCCACTCCAGATC +
Preference number: 4 (lower is better)
Translates to: QSWLHIRIARSN*ENFSPRAPLQI
Trigger: GATCTGGAGTGGAGCCCTAGGACTGAAATTTTCCAAATTGCTCCTGGCAATTCTTATGTGCAGCCAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
3UTR CAA 72 bp AGTTTTTACATAAACAGACACAGTACCAGAGGGTTATaGCTATGGGCAGTCACACGTACACGACACCCAGTC +
Preference number: 4 (lower is better)
Translates to: SFYINRHSTRGL*LWAVTRTRHPV
Trigger: GACTGGGTGTCGTGTACGTGTGACTGCCCATAGCAATAACCCTCTGGTACTGTGTCTGTTTATGTAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTACAATTTTCCAGCTCCTaGGGTCTGAATGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVQFSSS*GLNGCS
Trigger: GCTGCAGCCATTCAGACCTCAGGAGCTGGAAAATTG...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTACGATCATGTGTGCCTTaGGGGTCTGCTTCTGCACGA +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLRSCVP*GSASAR
Trigger: TCGTGCAGAAGCAGACCCTCAAGGCACACATGATCG...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTGGTTGTGCATCCGGTTaGATTCCTTCCCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVGCASG*IPSHKA
Trigger: AGCTTTGTGGGAAGGAATTCAACCGGATGCACAACC...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATACAAGGGCCCCGTGAATaGCCTGAGAAGGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIQGPRE*PEKAFH
Trigger: ATGGAAAGCCTTCTCAGGTCATTCACGGGGCCCTTG...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATACTGTCTTATGGGGCATaGGGCCTCAGAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRILSYGA*GLRARQ
Trigger: CTGTCTTGCTCTGAGGCCTCATGCCCCATAAGACAG...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTAAATCTGGGATAGGATaGAGCACAATAATAACCAGT +
Preference number: 4 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPKSGIG*STIITS
Trigger: ACTGGTTATTATTGTGCTTCATCCTATCCCAGATTT...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTTTCATCATGTGGTTCTaGAGCTGGCTCGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVFIMWF*SWLGYW
Trigger: CCAGTACCCGAGCCAGCTGCAGAACCACATGATGAA...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTGGCCGGATGTCCTTGTaGTTCATCATGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSGRMSL*FIMWFC
Trigger: GCAGAACCACATGATGAAGCACAAGGACATCCGGCC...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTTTCAAACGATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLFKRFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATCGTTTGAA...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTGGCTTCACGTCAGAGTaGACGATCATGTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSGFTSE*TIMCAL
Trigger: CAAGGCACACATGATCGTCCACTCTGACGTGAAGCC...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTACCTGCATCTGTCTTATaGGGCATGAGGCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLPASVL*GMRPQS
Trigger: GCTCTGAGGCCTCATGCCCCATAAGACAGATGCAGG...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCCAGCCCCCAGCAGTTaGAGATGGACATGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVPAPSS*RWTCLL
Trigger: TAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATACTGCTTGGAGTGAGGTaGGTGTGGGAGTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRILLGVR*VWELRA
Trigger: AGCTCTCAACTCCCACACCCACCTCACTCCAAGCAG...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTACAAAGTGTTCCAGGCTaGGGTAGAATTGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVQSVPG*GRIGSP
Trigger: TGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTG...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTAGCTGCACAAACTCCATaGCACACTCTGAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVAAQTP*HTLSRC
Trigger: ACATCTGCTCAGAGTGTGGCATGGAGTTTGTGCAGC...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTACACCCAGTCAGTATTaGTTTTCTCAGTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCTPSQY*FSQCQC
Trigger: GCACTGGCACTGAGAAAAGCAATACTGACTGGGTGT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATTGTTCTCCTCTGAGTaGAGGGCGAGGGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLLFSSE*RARVTS
Trigger: AGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATGCTTGACTTTCATGTaGCGTGTCAGGTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVCLTFM*RVRFPF
Trigger: GAAGGGGAACCTGACACGCCACATGAAAGTCAAGCA...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAAGGTGGCAGGGGAAATaGGTCAGAGATGGACACAAC +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLRWQGK*VRDGHN
Trigger: GTTGTGTCCATCTCTGACCCATTTCCCCTGCCACCT...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAGCCCCTCTGAGGACTTaGAATGGGTTTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIAPLRT*NGFLTQ
Trigger: CTGGGTCAAAAACCCATTCCAAGTCCTCAGAGGGGC...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTAAATCAGATGGAACTTaGGCTGCTTGGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSKSDGT*AAWSEV
Trigger: CACCTCACTCCAAGCAGCTCAAGTTCCATCTGATTT...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTACTCTTGTGGGTTTATaGAAGGTCAGCCTTAGTCTC +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVTLVGL*KVSLSL
Trigger: GAGACTAAGGCTGACCTTTCATAAACCCACAAGAGT...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTACAGCCAAGTCGAAATaGACATCCTCGTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCTAKSK*TSSSLI
Trigger: GATCAAAGACGAGGATGTGCATTTCGACTTGGCTGT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAGAGGGTGACTTCTTCTaGAGGGTGGTTATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIEGDFF*RVVIGH
Trigger: ATGCCCTATAACCACCCTGCAGAAGAAGTCACCCTC...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTCAAATCCCACACTTATaGTCCTTCACACCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSQIPHL*SFTPLW
Trigger: CCACAAGGGTGTGAAGGAGCATAAGTGTGGGATTTG...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTACCATTCTCCCTTGGATaGATCCTCCTTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLPFSLG*ILLLLL
Trigger: AAGGAGGAGAAGGAGGATGCATCCAAGGGAGAATGG...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAAGGTTGGGAAGGCCGTaGTTTTTGTTCTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLRLGRP*FLFSSE
Trigger: CTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCT...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCAGGGTGAATTTGCTTaGGCAATAGAGGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVQGEFA*AIEALE
Trigger: TTCAAGTGCCTCTATTGCCCAAGCAAATTCACCCTG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCAACAGCATACAAAACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTAAGAGGGTTATTGCTATaGGCAGTCACACGTACACGA +
Preference number: 4 (lower is better)
Translates to: LNSIQNQCFSIGAQVNAVRGLLL*AVTRTR
Trigger: TCGTGTACGTGTGACTGCCCATAGCAATAACCCTCT...TACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTTGTATGCTGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTCCCAGCAGTTGGAGATaGACATGTCTTCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCPSSWR*TCLLKE
Trigger: TTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGG...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAACACTGCCAGCATCCTaGGCAATTTCATCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLITLPAS*AISSEA
Trigger: TGCCTCTGATGAAATTGCCCAGGATGCTGGCAGTGT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATTCAAGGCTTGCCTTCTaGTTCATCAGCTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENSRLAF*FISSLG
Trigger: GCCTAATGAGCTGATGAACCAGAAGGCAAGCCTTGA...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCTTAGTTCTCTGAGATaGCCCACATGGACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVLSSLR*PTWTLL
Trigger: AAGGAGAGTCCATGTGGGCCATCTCAGAGAACTAAG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTCCTCAAACATTCCCATaGGGTTTGTTTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVPQTFP*GLFWLE
Trigger: TTCCAACCAAAACAAACCTCATGGGAATGTTTGAGG...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCATCTTCATTTCCTTCTaGATCCTTGGCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPIFISF*ILGNFP
Trigger: TGGAAAATTGCCAAGGATGCAGAAGGAAATGAAGAT...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAGTACCAGAGGGTTATTaGTATGGGCAGTCACACGTA +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLVPEGY*YGQSHV
Trigger: TACGTGTGACTGCCCATAGCAATAACCCTCTGGTAC...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTTTGCCAGGAGCAATTTaGAAAATTTCAGTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVLPGAI*KISVLG
Trigger: CCCTAGGACTGAAATTTTCCAAATTGCTCCTGGCAA...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTTCTGAGGACTTGGAATaGGTTTTTGACCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSSEDLE*VFDPEL
Trigger: CAACTCTGGGTCAAAAACCCATTCCAAGTCCTCAGA...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCAGTGGTCAAAAGGCTaGAAAGCATTTGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVQWSKG*KAFGSD
Trigger: GTCACTACCAAATGCTTTCCAGCCTTTTGACCACTG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATACACAAAGCTTGCATTTaGAAGGCTTCACGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIHKACI*KASRQS
Trigger: ACTCTGACGTGAAGCCTTTCAAATGCAAGCTTTGTG...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTCATTACCTACATCCCTaGTCATTTAGTCTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCHYLHP*SFSLSH
Trigger: ATGGCTTAGACTAAATGAGCAGGGATGTAGGTAATG...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTGCTGCACATAAGAATTaGCAGGAGCAATTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCAAHKN*QEQFGK
Trigger: TTTTCCAAATTGCTCCTGGCAATTCTTATGTGCAGC...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTCTTCCCTTAACTCTGTaGTCTTGCATAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSLPLTL*SCIKCP
Trigger: TGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAG...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTGAGGTTTGTTTTGGTTaGAAAGGACTAGAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVEVCFG*KGLEPV
Trigger: AACAGGCTCTAGTCCTTTCCAACCAAAACAAACCTC...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAGGCAAACCAGGATGTTaGTCACTCAACAGCATACAA +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRIGKPGC*SLNSIQ
Trigger: TTGTATGCTGTTGAGTGACCAACATCCTGGTTTGCC...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAGAACAGAAATACTTATaGAGTCTCTGGGAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLEQKYL*SLWEVS
Trigger: GGACACTTCCCAGAGACTTCATAAGTATTTCTGTTC...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTATTTTACCTTATATCTaGAGCAACTACTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCILPYI*SNYWRA
Trigger: TGCTCTCCAGTAGTTGCTGCAGATATAAGGTAAAAT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTTATTGCTTTTCTCAGTaGCAGTGCCTAAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVYCFSQ*QCLSKS
Trigger: AGACTTACTTAGGCACTGGCACTGAGAAAAGCAATA...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTCATGGTTCAAGCATCTaGGAAGAAATAATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVHGSSI*EEIMSH
Trigger: GTGACTCATTATTTCTTCCCAGATGCTTGAACCATG...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTTCTAAAGGAATGTACTaGGAAATCTGGGATAGGATG +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSSKGMY*EIWDRM
Trigger: CATCCTATCCCAGATTTCCCAGTACATTCCTTTAGA...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAATTCTACAGGACGTGTaGTCAAACACAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIILQDV*SNTAHS
Trigger: ACTATGTGCTGTGTTTGACCACACGTCCTGTAGAAT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATTGTCTCAACATTAACTaGTCCCTCAAACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENCLNIN*SLKHSH
Trigger: ATGGGAATGTTTGAGGGACCAGTTAATGTTGAGACA...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATACCAGTTACTCTTGTaGGTTTATGAAAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLYQLLL*VYERSA
Trigger: GGCTGACCTTTCATAAACCCACAAGAGTAACTGGTA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATCAGAGTCTCACAATATaGTATTCTGGTTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENQSLTI*YSGFGM
Trigger: CATTCCAAAACCAGAATATCATATTGTGAGACTCTG...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAACTTTGCTGGTCCATTaGTTTGTTCAAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LFNSSSSCAISDIFGYRITLLVH*FVQSDS
Trigger: ACTGTCACTTTGAACAAATCAATGGACCAGCAAAGT...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR TCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAATACAGTATGCACATTaGGCTTTCTCATGCAACTAC +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIIQYAH*AFSCNY
Trigger: GTAGTTGCATGAGAAAGCTCAATGTGCATACTGTAT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTTCTTTTCAGGTAAACTaGTTTTTCAGTGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLSFQVN*FFSEAE
Trigger: TTCTGCTTCACTGAAAAAGCAGTTTACCTGAAAAGA...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTACAATCTTCTCAATCTTaGCTGCACATAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLQSSQS*LHIRIA
Trigger: GGCAATTCTTATGTGCAGCCAAGATTGAGAAGATTG...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTAATGTACTGGGAAATCTaGGATAGGATGAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLMYWEI*DRMKHN
Trigger: ATTGTGCTTCATCCTATCCCAGATTTCCCAGTACAT...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTACTAAAAACAGGCCCTaGAATACACTCCATAACAAA +
Preference number: 4 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSTKNRP*NTLHNK
Trigger: TTTGTTATGGAGTGTATTCCAGGGCCTGTTTTTAGT...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATTTAACTCTGTGCTCTTaGATAAAGTGTCCATGTAAT +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENLTLCS*IKCPCN
Trigger: ATTACATGGACACTTTATGCAAGAGCACAGAGTTAA...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR GCA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATAAAAATATGCCACTTTaGTGGTCCATTGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSTILVPQISQSLDFWENKNMPL*WSIDLF
Trigger: GAACAAATCAATGGACCAGCAAAGTGGCATATTTTT...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CCA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAATGATATTCTGGTTTTaGAATGCTGGTAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QGLINTVCTLSFLMQLLIMIFWF*NAGNLG
Trigger: TCCAAGATTACCAGCATTCCAAAACCAGAATATCAT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp GGCTGCCCTGGGCACTCTCCCCGTCTGACTGGAACACCGGCACCTTaGCCCGGCGCTTCTGAGAGAGGTCAAAGGGCTCCTCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GCPGHSPRLTGTPAP*PGASERGQRAPPAP
Trigger: TGGAGCAGGAGGAGCCCTTTGACCTCTCTCAGAAGCGCCGGGCCAAGGTGCCGGTGTTCCAGTCAGACGGGGAGAGTGCCCAGGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp TTCACGTCCACCCTCTCCACCTTCTGCTTGGTCTCCTCGCTCTCCTaGGGCTCGGCTTTCCGGGGCAGCAGAGGTTCCGGGGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FTSTLSTFCLVSSLS*GSAFRGSRGSGGCL
Trigger: CAAGCAGCCCCCGGAACCTCTGCTGCCCCGGAAAGCCGAGCCCCAGGAGAGCGAGGAGACCAAGCAGAAGGTGGAGAGGGTGGACGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 90 bp TCCTCCTTCTCCTCCTTGCAGGCTTCCTCCAGCACCTCGGGGGCGTaGTCCGACTTGGTGGACAGATCCTCGGGTGTGCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSFSSLQASSSTSGA*SDLVDRSSGVQSCW
Trigger: CCAGCAGCTCTGCACACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGAGAAGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 90 bp CTCTCCCCGTCTGACTGGAACACCGGCACCTTGGCCCGGCGCTTCTaGGAGAGGTCAAAGGGCTCCTCCTGCTCCAGACTCCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: LSPSDWNTGTLARRF*ERSKGSSCSRLLRT
Trigger: TGTCCTGAGGAGTCTGGAGCAGGAGGAGCCCTTTGACCTCTCTCAGAAGCGCCGGGCCAAGGTGCCGGTGTTCCAGTCAGACGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp GGGCGCGGGGGCTGCGGGAACAGCAAAGGGAGGTTGGGAAGGCCGTaGTTTTTGTTCTCCTCTGAGTGGAGGGCGAGGGTGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GRGGCGNSKGRLGRP*FLFSSEWRARVTSS
Trigger: AGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCTTTGCTGTTCCCGCAGCCCCCGCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 90 bp TCCTCTTCTCCCATTCTCCCTTGGATGCATCCTCCTTCTCCTCCTTaGAGGCTTCCTCCAGCACCTCGGGGGCGTGCTCCGACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: SSSPILPWMHPPSPP*RLPPAPRGRAPTWW
Trigger: CCACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCAAAGTGCAGGCTGCGGTAGAATaGGAAGCCCACGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: PHGAGLNGFLLDGLAPKVQAAVE*EAHVAQ
Trigger: CTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTG...CACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCGGTTCCGGGGGCTGCTaGGGCAGGAAGGTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASGSGGC*GRKVCR
Trigger: CCGGCACACCTTCCTGCCCAAGCAGCCCCCGGAACC...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 90 bp TGCCCCAAGGTCACCCTTGCTCCTCTTCTCCCATTCTCCCTTGGATaGATCCTCCTTCTCCTCCTTGCAGGCTTCCTCCAGCACCTCGGG +
Preference number: 5 (lower is better)
Translates to: CPKVTLAPLLPFSLG*ILLLLLAGFLQHLG
Trigger: CCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAAGAGGAGCAAGGGTGACCTTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp ATTGGAAGCCCACGTTGCACAGGTCGATCATCTGAGAGTCATACTTaGGGCGCGGGGGCTGCGGGAACAGCAAAGGGAGGTTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IGSPRCTGRSSESHT*GAGAAGTAKGGWEG
Trigger: GCCTTCCCAACCTCCCTTTGCTGTTCCCGCAGCCCCCGCGCCCCAAGTATGACTCTCAGATGATCGACCTGTGCAACGTGGGCTTCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp GGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCTCTCCCTCTTTCTCTaGTGTACAGATTGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GWGHTALGLMGSCLTGLPLSLFL*CTDCRE
Trigger: TTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAG...GGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp CTGGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGTCCTGCTTGACGGGCTaGCCCCCAAAGTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGLMGSCLTGLPPKCSRLSCLTG*PPKCSR
Trigger: CCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGA...CAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCCCGCACACGCGGCAGTaGTGCGGCTTCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASPHTRQ*CGFTSL
Trigger: CAGCGAGGTGAAGCCGCACAACTGCCGCGTGTGCGG...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp GGGCTTAATGGGTTCCTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGTTAATGGGTTCCTGCTaGACGGGCTTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GLNGFLLDGLAPKVFQAALMGSC*TGLPPK
Trigger: CTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAA...CGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCTCCTGCTTGACGGGCTaGCCCCCAAAGTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASSCLTG*PPKCSR
Trigger: CCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAGGA...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 90 bp TGGGAAGGCCGTGGTTTTTGTTCTCCTCTGAGTGGAGGGCGAGGGTaGCTTCTTCTGCAGGGTGGTTATAGGGCATCTTTGTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: WEGRGFCSPLSGGRG*LLLQGGYRASLWAC
Trigger: GCATGCCCACAAAGATGCCCTATAACCACCCTGCAGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 90 bp GAACAGCAAAGGGAGGTTGGGAAGGCCGTGGTTTTTGTTCTCCTCTaGGTGGAGGGCGAGGGTGACTTCTTCTGCAGGGTGGTTATAGGG +
Preference number: 5 (lower is better)
Translates to: EQQREVGKAVVFVLL*VEGEGDFFCRVVIG
Trigger: CCCTATAACCACCCTGCAGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCTTTGCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGATGTGGCCCATCAGGTaGTGCATCCGGTTGAATTCC +
Preference number: 5 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEMWPIR*CIRLNS
Trigger: GGAATTCAACCGGATGCACAACCTGATGGGCCACAT...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AGGAATGGAGTGGGCGTTGGCTGGGGCCACACGGCGCTGGGCTTAATGGGTTCCTTTCCTTCTGCATCCTaGGCAATTTTCCCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: RNGVGVGWGHTALGLMGSFPSAS*AIFPED
Trigger: ATCTTCAGGGAAAATTGCCAAGGATGCAGAAGGAAA...GGAACCCATTAAGCCCAGCGCCGTGTGGCCCCAGCCAACGCCCACTCCATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGGGTTATAGGGCATCTTaGTGGGCATGCTCTTCCGTT +
Preference number: 5 (lower is better)
Translates to: TAMVSRREPCSRSEGLSEGYRAS*WACSSV
Trigger: AACGGAAGAGCATGCCCACAAAGATGCCCTATAACC...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCGGAAGGCCGTGGTTTTaGTTCTCCTCTGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASGRPWF*FSSEWR
Trigger: CCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCC...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCGGGGCGTGCTCCGACTaGGTGGACAGATCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPGACSD*VDRSSG
Trigger: ACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCCC...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACAGCAATGGTCTCCAGGAGGGAGCCGTGCTCGAGAAGTGAGGGTTTGTCTGAGTGCTGGTCCATTGATTaGTTCAAAGTGACAGTGGTC +
Preference number: 5 (lower is better)
Translates to: TAMVSRREPCSRSEGLSECWSID*FKVTVV
Trigger: GACCACTGTCACTTTGAACAAATCAATGGACCAGCA...CTCAGACAAACCCTCACTTCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp AGCGGATTCCAGACTTCTCAGATCAAGGACCTCCCTGAAGATCCGTaGAGCTATAGGACTTCAGCCGAATCCTTTACTCTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SGFQTSQIKDLPEDP*SYRTSAESFTLSEL
Trigger: CAGCTCAGACAGAGTAAAGGATTCGGCTGAAGTCCTATAGCTCCACGGATCTTCAGGGAGGTCCTTGATCTGAGAAGTCTGGAATCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414109.2
CDS-3UTR CAA 90 bp AATGCTCAATCTGATGAAGACAGCCGACACAGAACAAGAGAATCTAAGTATTCTCGCCCACTGGCGTGCTaGGCTTCGTGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: NAQSDEDSRHRTRESKYSRPLAC*ASWALS
Trigger: GCTCAAGGCCCACGAAGCCAAGCACGCCAGTGGGCG...AGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCATCAGATTGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTTCGCACTCGGAGCAGTaGTACTGGATGGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLSHSEQ*YWMGPR
Trigger: CCGGGGCCCCATCCAGTACAACTGCTCCGAGTGCGA...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTCCCCCTTCCCAGACCTaGGGAATGAAGGCCCCGCTC +
Preference number: 5 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLPPSQT*GMKAPL
Trigger: GAGCGGGGCCTTCATTCCCAAGGTCTGGGAAGGGGG...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCAGGCAAACCAGGATGTaGGTCACTCAACAGCATACA +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASRQTRM*VTQQHT
Trigger: TGTATGCTGTTGAGTGACCAACATCCTGGTTTGCCT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCGGGTACTGGAAGGTCTaGTCGCACTCGGAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPGYWKV*SHSEQL
Trigger: CAACTGCTCCGAGTGCGACAAGACCTTCCAGTACCC...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTAGGTTGTGCATCCGGTaGAATTCCTTCCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPRLCIR*NSFPQS
Trigger: GCTTTGTGGGAAGGAATTCAACCGGATGCACAACCT...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTCTCTCCACCTTCTGCTaGGTCTCCTCGCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCLSTFC*VSSLSW
Trigger: CCAGGAGAGCGAGGAGACCAAGCAGAAGGTGGAGAG...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TGTAACCACAGAAACCCACAGTCTTCTCTTCACAATCTCCGTTGCAGGTGCCCTCCACAAAGCTTGCATTaGAAAGGCTTCACGTCAGAG +
Preference number: 5 (lower is better)
Translates to: CNHRNPQSSLHNLRCRCPPQSLH*KGFTSE
Trigger: CTCTGACGTGAAGCCTTTCAAATGCAAGCTTTGTGG...AGGGCACCTGCAACGGAGATTGTGAAGAGAAGACTGTGGGTTTCTGTGGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CATGGCCGCAGTGTGAATAAATGTGTAACCAGACCCCAAGAGCTGGAAGCCTCCATTGCCAGGAGCAATTaGGAAAATTTCAGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: HGRSVNKCVTRPQELEASIARSN*ENFSPR
Trigger: CCTAGGACTGAAATTTTCCAAATTGCTCCTGGCAAT...GGAGGCTTCCAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 90 bp CTGTCTCTCTCCCTCTCTCTCTCCCTCTTTCTCTTGTGTACAGATTaGAGGGAACTTAAAGAACTCGCAGGGACAGTGTTTCGAATGACT +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSLFLLCTD*RELKELAGTVFRMT
Trigger: AGTCATTCGAAACACTGTCCCTGCGAGTTCTTTAAGTTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAGAGAGAGGGAGAGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTAGGTGGGTGTGGGAGTaGAGAGCTTCTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCRWVWE*RASPPL
Trigger: AAGGGGAGGAGAAGCTCTCAACTCCCACACCCACCT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 90 bp TCTTCATTTCCTTCTGCATCCTTGGCAATTTTCCCTGAAGATCCGTaGAGCTATAGGACTTCAGCCGAATCCTTTACTCTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SSFPSASLAIFPEDP*SYRTSAESFTLSEL
Trigger: CAGCTCAGACAGAGTAAAGGATTCGGCTGAAGTCCTATAGCTCCACGGATCTTCAGGGAAAATTGCCAAGGATGCAGAAGGAAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS-3UTR CAA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATCAGGCTGCGGTAGAATaGGAAGCCCACGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: LSTILVPQISQSLDFWENQAAVE*EAHVAQ
Trigger: CTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTG...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATATGCTCCTTCACACCCTaGTGGGTGAGGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGLINTVCTLSFLMQLLICSFTP*WVRECC
Trigger: GCAGCACTCCCTCACCCACAAGGGTGTGAAGGAGCA...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATCGAGAAGTGAGGGTTaGTCTGAGGAGCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLSRSEG*SEEPGP
Trigger: GGGCCCTGGCTCCTCAGACAAACCCTCACTTCTCGA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTAGGGGTTTTGCCACGTaGGCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCRGFAT*ARLVSN
Trigger: GTTTGAGACCAACCTGGCCAACGTGGCAAAACCCCT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATGCCAGCCCCCAGCAGTaGGAGATGGACATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSTILVPQISQSLDFWENASPQQ*EMDMSS
Trigger: AGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGC...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCTCCTTCCCACAAAGCTaGCATTTGAAAGGCTTCACG +
Preference number: 5 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPSFPQS*HLKGFT
Trigger: CGTGAAGCCTTTCAAATGCAAGCTTTGTGGGAAGGA...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATATTAATGGGTTCCTGCTaGACGGGCTTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LFNSSSSCAISDIFGYRILMGSC*TGLPPK
Trigger: CTTTGGGGGCAAGCCCGTCAAGCAGGAACCCATTAA...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTGACACCCAGTCAGTATaGCTTTTCTCAGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLDTQSV*LFSVPV
Trigger: CACTGGCACTGAGAAAAGCAATACTGACTGGGTGTC...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTACTCTCCTTCAAGGCTaGCCTTCTGGTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVTLLQG*PSGSSA
Trigger: AGCTGATGAACCAGAAGGCAAGCCTTGAAGGAGAGT...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTTTTCCTTCTGCATCCTaGGCAATTTTCCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCFPSAS*AIFQLL
Trigger: CAGGAGCTGGAAAATTGCCAAGGATGCAGAAGGAAA...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTGTCAACTATTCTAGTACCCCAAATAAGTCAGAGCTTAGATTTCTGGGAGAATTCCATGACTCCATGCTaGACTTTCATGTGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: LSTILVPQISQSLDFWENSMTPC*TFMWRV
Trigger: GACACGCCACATGAAAGTCAAGCATGGAGTCATGGA...ATTCTCCCAGAAATCTAAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATTCTCCCATTCTCCCTaGGATGCATCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLFSHSP*DASSFS
Trigger: GGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ATGATATTCTGGTTTTGGAATGCTGGTAATCTTGGAAGGCTTCATCCCTTAGTTAGTACCAGAGGGTTATaGCTATGGGCAGTCACACGT +
Preference number: 5 (lower is better)
Translates to: MIFWFWNAGNLGRLHPLVSTRGL*LWAVTR
Trigger: ACGTGTGACTGCCCATAGCAATAACCCTCTGGTACT...AACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AACCAATGTTTTAGCATTGGTGCTCAGGTTAATGCTGTATTAACCATCAGGTTATCTTCACAATCTCCGTaGCAGGTGCCCTTACCTCAG +
Preference number: 5 (lower is better)
Translates to: NQCFSIGAQVNAVLTIRLSSQSP*QVPLPQ
Trigger: CTGAGGTAAGGGCACCTGCAACGGAGATTGTGAAGA...TAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATATGCCCCTCTGAGGACTaGGAATGGGTTTTTGACCCA +
Preference number: 5 (lower is better)
Translates to: LFNSSSSCAISDIFGYRICPSED*EWVFDP
Trigger: TGGGTCAAAAACCCATTCCAAGTCCTCAGAGGGGCA...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATACTCTCCCTCTTTCTCTaGTGTACAGATTGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LFNSSSSCAISDIFGYRILSLFL*CTDCRE
Trigger: TTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAG...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp TTTATTATACTGGCAATGCATAAAACGCCACTGATGAAGACCCTGCACATGTGTACCAATGTTTTAGCATaGGTGCTCAGGTTAATGCTG +
Preference number: 5 (lower is better)
Translates to: FIILAMHKTPLMKTLHMCTNVLA*VLRLML
Trigger: CAGCATTAACCTGAGCACCAATGCTAAAACATTGGT...ACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTAAGGCTGGAAAGCATTaGGTAGTGACCTATTTTCAG +
Preference number: 5 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLKAGKH*VVTYFQ
Trigger: CTGAAAATAGGTCACTACCAAATGCTTTCCAGCCTT...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp ACCCTTCCCTTAACTCTGTGCTCTTGCATAAAGTGTCCATGTAATTTCTCACCCATATACCAGTTACTCTaGTGGGTTTATGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: TLPLTLCSCIKCPCNFSPIYQLL*WVYERS
Trigger: TGACCTTTCATAAACCCACAAGAGTAACTGGTATAT...GGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGGGAAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGGGCTTAATAAATACAGTATGCACATTGAGCTTTCTCATGCAACTACTCATAACTTGGAATGGGTTTTaGACCCAGAGTTGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QGLINTVCTLSFLMQLLITWNGF*TQSCAC
Trigger: ACAAGCACAACTCTGGGTCAAAAACCCATTCCAAGT...TATGAGTAGTTGCATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp AGAGCATTCTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTAATACAGTATGCACATaGAGCTTTCTCATGCAACTA +
Preference number: 5 (lower is better)
Translates to: RAFSSIAHPPVPFLTFLVNTVCT*SFLMQL
Trigger: TAGTTGCATGAGAAAGCTCAATGTGCATACTGTATT...AACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CAGTCTCCAGAAAATGACAGTTCATGCAGAAAGCTATATTTGAACTGCCTCCTTAGCAATATTCACAACTaGGGCTGCTATATACTTAGA +
Preference number: 5 (lower is better)
Translates to: QSPENDSSCRKLYLNCLLSNIHN*GCYILR
Trigger: TCTAAGTATATAGCAGCCCAAGTTGTGAATATTGCT...AAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCTGGAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS-3UTR CAA 90 bp CTCTTCAATAGCTCATCCTCCTGTGCCATTTCTGACATTTTTGGTTATAGAATAACATTTGGTGTAATGTaGTCCAAATATGCGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LFNSSSSCAISDIFGYRITFGVM*SKYAKD
Trigger: ATCCTTCGCATATTTGGACAACATTACACCAAATGT...TATTCTATAACCAAAAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 72 bp GTTCCGGGGGCTGCTTGGGCAGGAAGGTGTGCCGGCTaGAGGGGAAGGGCGAGGACGAGGGCACGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: VPGAAWAGRCAG*RGRARTRARRR
Trigger: CCTTCTTCGTGCCCTCGTCCTCGCCCTTCCCCTTCAGCCGGCACACCTTCCTGCCCAAGCAGCCCCCGGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 90 bp TCCTCCTTGCAGGCTTCCTCCAGCACCTCGGGGGCGTGCTCCGACTaGGTGGACAGATCCTCGGGTGTGCAGAGCTGCTGGCTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SSLQASSSTSGACSD*VDRSSGVQSCWLWG
Trigger: CCCCCAGAGCCAGCAGCTCTGCACACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 72 bp TCCTCCTTGCAGGCTTCCTCCAGCACCTCGGGGGCGTaGTCCGACTTGGTGGACAGATCCTCGGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLQASSSTSGA*SDLVDRSSGVQ
Trigger: CTGCACACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp GGGCACTCTCCCCGTCTGACTGGAACACCGGCACCTTaGCCCGGCGCTTCTGAGAGAGGTCAAAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GHSPRLTGTPAP*PGASERGQRAP
Trigger: AGGAGCCCTTTGACCTCTCTCAGAAGCGCCGGGCCAAGGTGCCGGTGTTCCAGTCAGACGGGGAGAGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp CTTCCTCCAGCACCTCGGGGGCGTGCTCCGACTTGGTaGACAGATCCTCGGGTGTGCAGAGCTGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LPPAPRGRAPTW*TDPRVCRAAGS
Trigger: AGAGCCAGCAGCTCTGCACACCCGAGGATCTGTCCACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 72 bp TCGCACTCGGAGCAGTTGTACTGGATGGGGCCCCGGTaGGTGGTGAGGTGTCTCTTCAGCTGGGCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: SHSEQLYWMGPR*VVRCLFSWAKV
Trigger: CACCTTGGCCCAGCTGAAGAGACACCTCACCACGCACCGGGGCCCCATCCAGTACAACTGCTCCGAGTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 90 bp CCGGCACAGTCTCTCTCCTGGCCGCCCTCTGCCCCAAGGTCACCCTaGCTCCTCTTCTCCCATTCTCCCTTGGATGCATCCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PAQSLSWPPSAPRSP*LLFSHSPLDASSFS
Trigger: GGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAAGAGGAGCAAGGGTGACCTTGGGGCAGAGGGCGGCCAGGAGAGAGACTGTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 72 bp TCTGACTGGAACACCGGCACCTTGGCCCGGCGCTTCTaGGAGAGGTCAAAGGGCTCCTCCTGCTCCAGACTC +
Preference number: 6 (lower is better)
Translates to: SDWNTGTLARRF*ERSKGSSCSRL
Trigger: GAGTCTGGAGCAGGAGGAGCCCTTTGACCTCTCTCAGAAGCGCCGGGCCAAGGTGCCGGTGTTCCAGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 90 bp GGGGGCTGCGGGAACAGCAAAGGGAGGTTGGGAAGGCCGTGGTTTTaGTTCTCCTCTGAGTGGAGGGCGAGGGTGACTTCTTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GGCGNSKGRLGRPWF*FSSEWRARVTSSAG
Trigger: CCCTGCAGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCTTTGCTGTTCCCGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 90 bp CTCCTCTTCTCCCATTCTCCCTTGGATGCATCCTCCTTCTCCTCCTaGCAGGCTTCCTCCAGCACCTCGGGGGCGTGCTCCGACTTGGTG +
Preference number: 6 (lower is better)
Translates to: LLFSHSPLDASSFSS*QASSSTSGACSDLV
Trigger: CACCAAGTCGGAGCACGCCCCCGAGGTGCTGGAGGAAGCCTGCAAGGAGGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAAGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp GGCTGCGGGAACAGCAAAGGGAGGTTGGGAAGGCCGTaGTTTTTGTTCTCCTCTGAGTGGAGGGCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GCGNSKGRLGRP*FLFSSEWRARV
Trigger: CACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCTTTGCTGTTCCCGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp CCACGTTGCACAGGTCGATCATCTGAGAGTCATACTTaGGGCGCGGGGGCTGCGGGAACAGCAAAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: PRCTGRSSESHT*GAGAAGTAKGG
Trigger: ACCTCCCTTTGCTGTTCCCGCAGCCCCCGCGCCCCAAGTATGACTCTCAGATGATCGACCTGTGCAACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp CCATCTAGGTCTCCTGGGGGAGGTTCATACCGAAACTaGGAAAATGGCCCTCGGAGAGCTTCCGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PSRSPGGGSYRN*ENGPRRASGKG
Trigger: CCCCTTCCCGGAAGCTCTCCGAGGGCCATTTTCCCAGTTTCGGTATGAACCTCCCCCAGGAGACCTAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CCA 72 bp CCACGTTGCACAGGTCGATCATCTGAGAGTCATACTTaGGGCGCGGGGGCGAAACTGGGAAAATGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: PRCTGRSSESHT*GAGAKLGKWPS
Trigger: CGAGGGCCATTTTCCCAGTTTCGCCCCCGCGCCCCAAGTATGACTCTCAGATGATCGACCTGTGCAACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS TCA 72 bp AGGGAGGTTGGGAAGGCCGTGGTTTTTGTTCTCCTCTaGGTGGAGGGCGAGGGTGACTTCTTCTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: REVGKAVVFVLL*VEGEGDFFCRV
Trigger: CACCCTGCAGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS TCA 72 bp GAGGTGGTGCGGCTGCACAAACTCCATGCCACACTCTaGGCAGATGTAGGGCCGGATGTCCTTGTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: EVVRLHKLHATL*ADVGPDVLVLH
Trigger: ATGAAGCACAAGGACATCCGGCCCTACATCTGCTCAGAGTGTGGCATGGAGTTTGTGCAGCCGCACCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS GCA 72 bp GTCACCCTTGCTCCTCTTCTCCCATTCTCCCTTGGATaGATCCTCCTTCTCCTCCTTGCAGGCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VTLAPLLPFSLG*ILLLLLAGFLQ
Trigger: CTGGAGGAAGCCTGCAAGGAGGAGAAGGAGGATGCATCCAAGGGAGAATGGGAGAAGAGGAGCAAGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 72 bp GGGAACAGCAAAGGGAGGTTGGGAAGGCCGTGGTTTTaGTTCTCCTCTGAGTGGAGGGCGAGGGTGACTTCT +
Preference number: 6 (lower is better)
Translates to: GNSKGRLGRPWF*FSSEWRARVTS
Trigger: AGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACGGCCTTCCCAACCTCCCTTTGCTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 72 bp GGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGTAGAATaGGAAGCCCACGTTGCACAGGTCGATCATCTGAGA +
Preference number: 6 (lower is better)
Translates to: GLAPKVFQAAVE*EAHVAQVDHLR
Trigger: TCTCAGATGATCGACCTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTGGGGGCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000514477.5
CDS CAA 90 bp CTGCTTGACGGGCTTGCCCCCAAAGTGTTCCAGGCTGCGGTAGAATaGGAAGCCCACGTTGCACAGGTCGATCATCTGAGAGTCATACTT +
Preference number: 6 (lower is better)
Translates to: LLDGLAPKVFQAAVE*EAHVAQVDHLRVIL
Trigger: AAGTATGACTCTCAGATGATCGACCTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTGGAACACTTTGGGGGCAAGCCCGTCAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000514477.5
CDS GCA 72 bp AGTGTTCCAGGCTGCGGTAGAATTGGAAGCCCACGTTaGACAGGTCGATCATCTGAGAGTCATACTTGGGGC +
Preference number: 6 (lower is better)
Translates to: SVPGCGRIGSPR*TGRSSESHTWG
Trigger: GCCCCAAGTATGACTCTCAGATGATCGACCTGTGCAACGTGGGCTTCCAATTCTACCGCAGCCTGGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000514477.5
CDS TCA 72 bp CGTGGTTTTTGTTCTCCTCTGAGTGGAGGGCGAGGGTaGCTTCTTCTGCAGGGTGGTTATAGGGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: RGFCSPLSGGRG*LLLQGGYRASL
Trigger: CAAAGATGCCCTATAACCACCCTGCAGAAGAAGTCACCCTCGCCCTCCACTCAGAGGAGAACAAAAACCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318442.6
CDS CAA 90 bp TCCCTGCTCTCTCTGTCTCTCTCCCTCTCTCTCTCCCTCTTTCTCTaGTGTACAGATTGCAGGGAACTTAAAGAACTCGCAGGGACAGTG +
Preference number: 6 (lower is better)
Translates to: SLLSLSLSLSLSLFL*CTDCRELKELAGTV
Trigger: CACTGTCCCTGCGAGTTCTTTAAGTTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAGAGAGAGGGAGAGAGACAGAGAGAGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000414109.2
CDS CCA 72 bp CAGACTTCTCAGATCAAGGACCTCCCTGAAGATCCGTaGAGCTATAGGACTTCAGCCGAATCCTTTACTCTG +
Preference number: 6 (lower is better)
Translates to: QTSQIKDLPEDP*SYRTSAESFTL
Trigger: CAGAGTAAAGGATTCGGCTGAAGTCCTATAGCTCCACGGATCTTCAGGGAGGTCCTTGATCTGAGAAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414109.2
CDS CCA 72 bp CCTTCTGCATCCTTGGCAATTTTCCCTGAAGATCCGTaGAGCTATAGGACTTCAGCCGAATCCTTTACTCTG +
Preference number: 6 (lower is better)
Translates to: PSASLAIFPEDP*SYRTSAESFTL
Trigger: CAGAGTAAAGGATTCGGCTGAAGTCCTATAGCTCCACGGATCTTCAGGGAAAATTGCCAAGGATGCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514477.5
CDS GCA 72 bp TCCCTCTCTCTCTCCCTCTTTCTCTTGTGTACAGATTaGAGGGAACTTAAAGAACTCGCAGGGACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: SLSLSLFLLCTD*RELKELAGTVF
Trigger: AAACACTGTCCCTGCGAGTTCTTTAAGTTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAGAGAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000414109.2
CDS CAA 72 bp TCTCTGTCTCTCTCCCTCTCTCTCTCCCTCTTTCTCTaGTGTACAGATTGCAGGGAACTTAAAGAACTCGCA +
Preference number: 6 (lower is better)
Translates to: SLSLSLSLSLFL*CTDCRELKELA
Trigger: TGCGAGTTCTTTAAGTTCCCTGCAATCTGTACACAAGAGAAAGAGGGAGAGAGAGAGGGAGAGAGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318442.6
ENST00000414109.2