Pregenerated sensors for ZNF350 (Homo sapiens)
Ensembl gene IDs: ENSG00000256683Ensembl transcript IDs: ENST00000243644.9, ENST00000593596.1, ENST00000594929.5, ENST00000597555.1, ENST00000597788.5, ENST00000598254.1, ENST00000600703.5, ENST00000601430.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATCCACTTAAAAGTACTTaGGCTTCCTTTACTCATTTA | + |
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Preference number: 2 (lower is better) Translates to: HQLPLMKLFSHCNTPDTNPLKST*ASFTHL Trigger: TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGG...ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| 3UTR CAA 90 bp | CACAGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTaGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCA | + |
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Preference number: 2 (lower is better) Translates to: HSRAIAVYVLRLTSN*PVYHSIHFNRMSLS Trigger: TGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| 3UTR-3UTR CAA 90 bp | CAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATGACACAGTCGAGCAATaGCTGTGTATGTGCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: QLPLMKLFSHCNTPDTNYDTVEQ*LCMCLG Trigger: ACCTAAGCACATACACAGCAATTGCTCGACTGTGTC...ATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| 3UTR GCA 72 bp | TCCCACCAACTGCCCCTTATGAAGCTTTTCAGTCACTaGAACACTCCCGACACCAATTATCTCATCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SHQLPLMKLFSH*NTPDTNYLICF Trigger: AAAACAGATGAGATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| 3UTR CCA 72 bp | ATTCACAGTACTTCATTTCCTCCACTTAAAAGTACTTaGGCTTCCTTTACTCATTTAATTGACACAGTCGAG | + |
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Preference number: 3 (lower is better) Translates to: IHSTSFPPLKST*ASFTHLIDTVE Trigger: CTCGACTGTGTCAATTAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATCTCCTGAGGCTGCACATCTaGCCACTGGCTGTCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: LPLMKLFSHCNTPDTNYLLRLHI*PLAVPQ Trigger: TTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTCAG...GAGATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | CACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATGACTACGTTCCTGTTTaGGAGGAGGCCGCTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: HQLPLMKLFSHCNTPDTNDYVPV*EEAADV Trigger: AACATCAGCGGCCTCCTCGCAAACAGGAACGTAGTC...ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | CACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATCATCCTCCAGTGTTATaGATTCCTGGGCCTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: HQLPLMKLFSHCNTPDTNHPPVL*IPGPGS Trigger: TGATCCAGGCCCAGGAATCCATAACACTGGAGGATG...ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | TTAGCCCTTTCCCACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTTGCACATCTGACCACTaGCTGTCCCACAAGGACTAC | + |
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Preference number: 4 (lower is better) Translates to: LALSHQLPLMKLFSHCNTCTSDH*LSHKDY Trigger: GTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCA...AGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTGGGAAAGGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATCTCCCGGTATGTGTTTTCTaGTGTATGTTGAGCCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LPLMKLFSHCNTPDTNYLPVCVF*CMLSRD Trigger: ATCACGGCTCAACATACATCAGAAAACACATACCGG...GAGATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATAACTTTCCATATGTCTaGACAGGCTCCACTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QLPLMKLFSHCNTPDTNYNFPYV*TGSTVD Trigger: ATCCACAGTGGAGCCTGTTCAGACATATGGAAAGTT...ATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATAAGCGCTCCAGCACATaGTCAACTTTCCATATGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLPLMKLFSHCNTPDTNYKRSST*STFHMS Trigger: AGACATATGGAAAGTTGATCATGTGCTGGAGCGCTT...ATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TTAGCCCTTTCCCACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTAGTTTTTCTCCTGCATaGCATCACTGGTGTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: LALSHQLPLMKLFSHCNTSFSPA*HHWCVM Trigger: CATTACACACCAGTGATGTCATGCAGGAGAAAAACT...AGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTGGGAAAGGGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | TTAGCCCTTTCCCACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTAAGGTTTCTGTCCTGTaGAAATCCTCTGTTATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LALSHQLPLMKLFSHCNTKVSVL*KSSVIS Trigger: GGAGATAACAGAGGATTTGCACAGGACAGAAACCTT...AGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTGGGAAAGGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | CACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATATCATGTTCATGACATaGTTTCCTTCTGTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: HQLPLMKLFSHCNTPDTNIMFMT*FPSVHQ Trigger: CTGGTGAACAGAAGGAAACCATGTCATGAACATGAT...ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | CAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATAGTGTTATGGATTCCTaGGCCTGGATCATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QLPLMKLFSHCNTPDTNYSVMDS*AWIIFF Trigger: GAAGAAAATGATCCAGGCCCAGGAATCCATAACACT...ATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATTGCCCCAAGAAATGGTaGACCCCAAATCCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYCPKKW*TPNPLP Trigger: AGGAAGTGGATTTGGGGTTCACCATTTCTTGGGGCA...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATCTCAATTTTCGTGTTTTCTaGTGCTTGGGACTGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: LPLMKLFSHCNTPDTNYLNFRVF*CLGLMN Trigger: ATTCATCAGTCCCAAGCATCAGAAAACACGAAAATT...GAGATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | AAATTCACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCTCCTCTGTTATCTCCTaGGGCTGCACATCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: KFTVLHFLHLKVLGLPLLSSVIS*GCTSDH Trigger: GTGGTCAGATGTGCAGCCTCAGGAGATAACAGAGGA...GAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTATTGCGAGGAGGCCGCTaGTGTTTAATGATGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HSTSFPPLKSTWASFTHLLRGGR*CLMMSE Trigger: CTCAGACATCATTAAACATCAGCGGCCTCCTCGCAA...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATGTGTGTAATGAGCTGTaGCTCTCTGCAGGAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYVCNEL*LSAGGF Trigger: AAATCCTCCTGCAGAGAGGCACAGCTCATTACACAC...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | CACAGATCCCTCTGCATAATACAAAGTTCTGAAAGTTTATGGTCCTGGTTTTCAAAGCTTTTCAGTCACTaGAACACTCCCGACACCAAT | + |
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Preference number: 4 (lower is better) Translates to: HRSLCIIQSSESLWSWFSKLFSH*NTPDTN Trigger: ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTT...TGAAAACCAGGACCATAAACTTTCAGAACTTTGTATTATGCAGAGGGATCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTACGTTCATGGTTAGCATaGAGAAAGGAGTCCCCATTT | + |
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Preference number: 4 (lower is better) Translates to: HSTSFPPLKSTWASFTHLRSWLA*RKESPF Trigger: AAATGGGGACTCCTTTCTTCATGCTAACCATGAACG...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCACCAACTGCCCCTTATaGAGCTTTTCAGTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGTNCPL*SFSVTA Trigger: TGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGT...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTAGAACAGGCTCCACTGTaGATTCCATCTTCAATTGTC | + |
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Preference number: 4 (lower is better) Translates to: HSTSFPPLKSTWASFTHLEQAPL*IPSSIV Trigger: GACAATTGAAGATGGAATCCACAGTGGAGCCTGTTC...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCCCTCCACACTGGCACTaGTCTAAGGAAACTGAATTG | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGPPHWH*SKETEL Trigger: CAATTCAGTTTCCTTAGACCAGTGCCAGTGTGGAGG...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATATTAATCCTCCACACTaGCACTGGTCTAAGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYINPPH*HWSKET Trigger: AGTTTCCTTAGACCAGTGCCAGTGTGGAGGATTAAT...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCGCAGAGTTTTTCTCCTaGATGACATCACTGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGAEFFS*MTSLVC Trigger: ACACACCAGTGATGTCATGCAGGAGAAAAACTCTGC...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTAAATGCATCATGTTCATaGCATGGTTTCCTTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: HSTSFPPLKSTWASFTHLNASCS*HGFLLF Trigger: GAACAGAAGGAAACCATGTCATGAACATGATGCATT...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTACTCATTTAATTGACACAGTCGAGCAATTGCTGTGTATGTGCTTAGGTGTGCTGATGAGTTTTTaGCTTGCAGGGAATTTAATT | + |
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Preference number: 4 (lower is better) Translates to: SFTHLIDTVEQLLCMCLGVLMSF*LAGNLI Trigger: AATTAAATTCCCTGCAAGTCAAAAACTCATCAGCAC...ACCTAAGCACATACACAGCAATTGCTCGACTGTGTCAATTAAATGAGTAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTACTCATTTAATTGACACAGTCGAGCAATTGCTGTGTATGTGCTTAGGTAAAATAAGACATAATTaGTCACGGAAGGCACAACCA | + |
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Preference number: 4 (lower is better) Translates to: SFTHLIDTVEQLLCMCLGKIRHN*SRKAQP Trigger: TGGTTGTGCCTTCCGTGATCAATTATGTCTTATTTT...ACCTAAGCACATACACAGCAATTGCTCGACTGTGTCAATTAAATGAGTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCATGTATGTTGAGCCGTaGTTTCTTGAGAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGMYVEP*FLEKGF Trigger: AAAGCCTTTCTCAAGAAATCACGGCTCAACATACAT...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATTTTCACAGATCCCTCTaGATAATACAAAGTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYFHRSL*IIQSSE Trigger: TTCAGAACTTTGTATTATGCAGAGGGATCTGTGAAA...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATCCACTTAAAAGTACTTaGGCTTCCTTTACTCATTTA | + |
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Preference number: 4 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYPLKST*ASFTHL Trigger: TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGG...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CCA 90 bp | CACAGATCCCTCTGCATAATACAAAGTTCTGAAAGTTTATGGTCCTGGTTTTCAGAAAGTTTATGGTCCTaGTTTTCAATTAATCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRSLCIIQSSESLWSWFSESLWS*FSINPP Trigger: TGGAGGATTAATTGAAAACCAGGACCATAAACTTTC...TGAAAACCAGGACCATAAACTTTCAGAACTTTGTATTATGCAGAGGGATCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR TCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCCTTTACTCATTTAATTaGCACAGTCGAGCAATTGCT | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGLYSFN*HSRAIA Trigger: AGCAATTGCTCGACTGTGTCAATTAAATGAGTAAAG...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR GCA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCTGCAGGGAATTTAATTaGAGTATGAAGTCGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGCREFN*SMKSFM Trigger: CATGAACGACTTCATACTGCAATTAAATTCCCTGCA...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | CACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATATCCGGTTTGCTGGCTaGATACCCCACTGCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: HQLPLMKLFSHCNTPDTNIRFAG*IPHCHQ Trigger: CTGGTGGCAGTGGGGTATCAAGCCAGCAAACCGGAT...ATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS TCA 90 bp | TTCTGTCCTGTGCAAATCCTCTGTTATCTCCTGAGGCTGCACATCTaGCCACTGGCTGTCCCACAAGGACTACGTTCCTGTTTGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FCPVQILCYLLRLHI*PLAVPQGLRSCLRG Trigger: TCCTCGCAAACAGGAACGTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTCAGGAGATAACAGAGGATTTGCACAGGACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS GCA 90 bp | ACAGAAGGCACTTGTGTAGTCGCCCCGTTAGCAGAGTTTTTCTCCTaGATGACATCACTGGTGTGTAATGAGCTGTGCCTCTCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TEGTCVVAPLAEFFS*MTSLVCNELCLSAG Trigger: TCCTGCAGAGAGGCACAGCTCATTACACACCAGTGATGTCATGCAGGAGAAAAACTCTGCTAACGGGGCGACTACACAAGTGCCTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS TCA 90 bp | TGCATTCACAAGGTTTCTGTCCTGTGCAAATCCTCTGTTATCTCCTaGGGCTGCACATCTGACCACTGGCTGTCCCACAAGGACTACGTT | + |
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Preference number: 5 (lower is better) Translates to: CIHKVSVLCKSSVIS*GCTSDHWLSHKDYV Trigger: AACGTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTCAGGAGATAACAGAGGATTTGCACAGGACAGAAACCTTGTGAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS GCA 90 bp | AACCTGTGGCCAATAATGTCTAGGATTCTTAATGTGGTGGAGGTATaGCTTTCCTCTGTGACGTTTCCGTGGAAGGACTGTGAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NLWPIMSRILNVVEV*LSSVTFPWKDCEGR Trigger: CCTGCCTTCACAGTCCTTCCACGGAAACGTCACAGAGGAAAGGCATACCTCCACCACATTAAGAATCCTAGACATTATTGGCCACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597788.5 |
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| CDS-3UTR CAA 90 bp | CTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATCTCCACCTTGGCTGCCTCTaGTTTCTCCCTTGTGTGTAT | + |
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Preference number: 5 (lower is better) Translates to: LPLMKLFSHCNTPDTNYLHLGCL*FLPCVY Trigger: ATACACACAAGGGAGAAACAAGAGGCAGCCAAGGTG...GAGATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | AGTCGAGCAATTGCTGTGTATGTGCTTAGGTTAACATCAAATTTGCCTGTGTATGGCCACAGAAGGCACTaGTGTAGTCGCCCCGTTAGC | + |
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Preference number: 5 (lower is better) Translates to: SRAIAVYVLRLTSNLPVYGHRRH*CSRPVS Trigger: GCTAACGGGGCGACTACACAAGTGCCTTCTGTGGCC...ATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | TTAGCCCTTTCCCACCAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTTTGAGCCGTGATTTCTaGAGAAAGGCTTTGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: LALSHQLPLMKLFSHCNTLSRDF*RKALPH Trigger: ATGTGGCAAAGCCTTTCTCAAGAAATCACGGCTCAA...AGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTGGTGGGAAAGGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS CCA 90 bp | AGCCACAGGAAACCTGCATCTGAATTTATGAGAAGGCTGCTATTCTaGACACCATCCACCACATCAACTCTAGGAAGAACCACTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SHRKPASEFMRRLLF*TPSTTSTLGRTTEE Trigger: TTCTTCAGTGGTTCTTCCTAGAGTTGATGTGGTGGATGGTGTCCAGAATAGCAGCCTTCTCATAAATTCAGATGCAGGTTTCCTGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS-3UTR CAA 90 bp | CAACTGCCCCTTATGAAGCTTTTCAGTCACTGCAACACTCCCGACACCAATTATTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: QLPLMKLFSHCNTPDTNYFRLCF*LLRSQN Trigger: GTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAA...ATAATTGGTGTCGGGAGTGTTGCAGTGACTGAAAAGCTTCATAAGGGGCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS GCA 90 bp | CATATTCCCAGGATGTCTAGGTTTTATTCCAAGTTAAATCCAGACTaGCACAAGGCTGAAATTAACTTGTGTTGGTCCCTGTGTTTACTG | + |
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Preference number: 5 (lower is better) Translates to: HIPRMSRFYSKLNPD*HKAEINLCWSLCLL Trigger: CAGTAAACACAGGGACCAACACAAGTTAATTTCAGCCTTGTGGCAGTCTGGATTTAACTTGGAATAAAACCTAGACATCCTGGGAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS-3UTR CAA 90 bp | AAATTCACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCTGGGATGGTCTGTCTTaGTATCTTCTGGCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KFTVLHFLHLKVLGLPLLWDGLS*YLLAFS Trigger: AGAGAAGGCCAGAAGATACAAAGACAGACCATCCCA...GAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | AAATTCACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCGACACAGTCGAGCAATaGCTGTGTATGTGCTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: KFTVLHFLHLKVLGLPLLDTVEQ*LCMCLG Trigger: ACCTAAGCACATACACAGCAATTGCTCGACTGTGTC...GAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS TCA 90 bp | CTATATTCAAACACCAGTTCAGCTATCTGTTCATTGAGAACCATTTaGAAGTCCTGGAATCCTGCCATATTCCCAGGATGTCTAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LYSNTSSAICSLRTI*KSWNPAIFPGCLGF Trigger: AAAACCTAGACATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAACTGGTGTTTGAATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 90 bp | TGTCTCCAAATCTATATTCAAACACCAGTTCAGCTATCTGTTCATTaGGAACCATTTGAAAGTCCTGGAATCCTGCCATATTCCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: CLQIYIQTPVQLSVH*EPFESPGILPYSQD Trigger: ATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAACTGGTGTTTGAATATAGATTTGGAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 90 bp | ATTAGCAAGATATTCCAGAAGCCCAGAGCTCACCCTCCATTAGCTTaGACACAAAGGCCAAAACTCCCTTTGTTCAATTATTTACTATAC | + |
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Preference number: 5 (lower is better) Translates to: ISKIFQKPRAHPPLA*TQRPKLPLFNYLLY Trigger: GTATAGTAAATAATTGAACAAAGGGAGTTTTGGCCTTTGTGTTCAAGCTAATGGAGGGTGAGCTCTGGGCTTCTGGAATATCTTGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS GCA 90 bp | GTAAATTATGATTTTCTTGTGACATTGGCTGTCAGAGATATTAGATaGAAGCTGACAGCTAATATAATCCACAGGATCCTCCAGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: VNYDFLVTLAVRDIR*KLTANIIHRILQPC Trigger: GCATGGCTGGAGGATCCTGTGGATTATATTAGCTGTCAGCTTGCATCTAATATCTCTGACAGCCAATGTCACAAGAAAATCATAATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS-3UTR CAA 90 bp | TCAAATTTGCCTGTGTATCACAGCATACATTTTAATAGGATGAGTTTATCAGGCCTTGGGACTGATGAATaGGGACTTAGTGCTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: SNLPVYHSIHFNRMSLSGLGTDE*GLSADE Trigger: CTCATCAGCACTAAGTCCCAATTCATCAGTCCCAAG...GCCTGATAAACTCATCCTATTAAAATGTATGCTGTGATACACAGGCAAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS GCA 90 bp | TTCAGCTATCTGTTCATTGAGAACCATTTGAAAGTCCTGGAATCCTaGCATATTCCCAGGATGTCTAGGTTTTATTCCAAGTTAAATCCA | + |
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Preference number: 5 (lower is better) Translates to: FSYLFIENHLKVLES*HIPRMSRFYSKLNP Trigger: TGGATTTAACTTGGAATAAAACCTAGACATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS-3UTR CAA 90 bp | AAATTCACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCGGATTCCATCTTCAATaGTCCACAGTTGTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KFTVLHFLHLKVLGLPLLGFHLQ*STVVLL Trigger: AAGGAGAACAACTGTGGACAATTGAAGATGGAATCC...GAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTAATGGACAATGAGCTTTaGCTTTGTGCTAAAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HSTSFPPLKSTWASFTHLMDNEL*LCAKGF Trigger: AAAGCCTTTAGCACAAAGCAAAAGCTCATTGTCCAT...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS-3UTR CAA 90 bp | CACAGTACTTCATTTCCTCCACTTAAAAGTACTTGGGCTTCCTTTACTCATTTATCTAAGGAAACTGAATaGACACATATGTGTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: HSTSFPPLKSTWASFTHLSKETE*THMCPT Trigger: TGTGGGACACATATGTGTCAATTCAGTTTCCTTAGA...TAAATGAGTAAAGGAAGCCCAAGTACTTTTAAGTGGAGGAAATGAAGTACTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS TCA 72 bp | GTGCAAATCCTCTGTTATCTCCTGAGGCTGCACATCTaGCCACTGGCTGTCCCACAAGGACTACGTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VQILCYLLRLHI*PLAVPQGLRSC Trigger: ACAGGAACGTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTCAGGAGATAACAGAGGATTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243644.9 |
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| CDS TCA 72 bp | TTCACCAGGCTTTCACTCTGCAAGCGCTCCAGCACATaGTCAACTTTCCATATGTCTGAACAGGCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: FTRLSLCKRSST*STFHMSEQAPL Trigger: CAGTGGAGCCTGTTCAGACATATGGAAAGTTGATCATGTGCTGGAGCGCTTGCAGAGTGAAAGCCTGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000243644.9 ENST00000601430.5 |
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| CDS CAA 90 bp | ATGGTGAACCCCAAATCCACTTCCTCCCTCTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAACCTGCTGGTAATTCCAGCTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: MVNPKSTSSLFRLCF*LLRSQNLLVIPATR Trigger: CCGAGTAGCTGGAATTACCAGCAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGGAGGAAGTGGATTTGGGGTTCACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594929.5 |
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| CDS TCA 72 bp | GTGTACTTTCTTACTTTACTGGGACACAATCACAGATaGCCTATGTGGCTGATCTTAGGTCCACACCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VYFLTLLGHNHR*PMWLILGPHPP Trigger: GGGAGGGTGTGGACCTAAGATCAGCCACATAGGTCATCTGTGATTGTGTCCCAGTAAAGTAAGAAAGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 72 bp | ACTTCCATAGCCTTCTGTCTTGTGGGTTCTCTCACCTaGACAGGCTCCACTGTGGATTCCATCTTCAATTGT | + |
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Preference number: 6 (lower is better) Translates to: TSIAFCLVGSLT*TGSTVDSIFNC Trigger: ACAATTGAAGATGGAATCCACAGTGGAGCCTGTTCAGGTGAGAGAACCCACAAGACAGAAGGCTATGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598254.1 |
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| CDS CAA 72 bp | CCCAAATCCACTTCCTCCCTCTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAACCTGTGGCCAATAATG | + |
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Preference number: 6 (lower is better) Translates to: PKSTSSLFRLCF*LLRSQNLWPIM Trigger: CATTATTGGCCACAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGGAGGAAGTGGATTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597788.5 |
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| CDS CAA 72 bp | CCCAAATCCACTTCCTCCCTCTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAACCTGCTGGTAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: PKSTSSLFRLCF*LLRSQNLLVIP Trigger: TGGAATTACCAGCAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGGAGGAAGTGGATTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594929.5 |
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| CDS CAA 90 bp | ATGGTGAACCCCAAATCCACTTCCTCCCTCTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAACCTGTGGCCAATAATGTCTAGGATT | + |
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Preference number: 6 (lower is better) Translates to: MVNPKSTSSLFRLCF*LLRSQNLWPIMSRI Trigger: AATCCTAGACATTATTGGCCACAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGGAGGAAGTGGATTTGGGGTTCACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597788.5 |
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| CDS TCA 72 bp | CAAGAAACAGCCACAGGAAACCTGCATCTGAATTTATaGGAAGGCTGCTATTCTGGACACCATCCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: QETATGNLHLNL*EGCYSGHHPPH Trigger: ATGTGGTGGATGGTGTCCAGAATAGCAGCCTTCTCATAAATTCAGATGCAGGTTTCCTGTGGCTGTTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 72 bp | GAGTCCTTCAAGAAACAGCCACAGGAAACCTGCATCTaGATTTATGAGAAGGCTGCTATTCTGGACACCATC | + |
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Preference number: 6 (lower is better) Translates to: ESFKKQPQETCI*IYEKAAILDTI Trigger: GATGGTGTCCAGAATAGCAGCCTTCTCATAAATTCAGATGCAGGTTTCCTGTGGCTGTTTCTTGAAGGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS CAA 72 bp | CCCAAATCCACTTCCTCCCTCTTCAGGTTATGTTTTTaGCTCCTGAGGAGTCAGAACCTCTATTTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PKSTSSLFRLCF*LLRSQNLYFLQ Trigger: CTGGAGAAAATAGAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGGAGGAAGTGGATTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000243644.9 ENST00000597555.1 ENST00000598254.1 ENST00000600703.5 ENST00000601430.5 |
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| CDS TCA 72 bp | AATGAGACCCACCATAGCACCAGCCTCAGGAGATGGTaGACTCTTAGGCAGATTAGTTTTAGAAAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: NETHHSTSLRRW*TLRQISFRKET Trigger: TGTCTCTTTTCTAAAACTAATCTGCCTAAGAGTTCACCATCTCCTGAGGCTGGTGCTATGGTGGGTCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597788.5 |
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| CDS CAA 72 bp | TCTTGGAAGACAGCATTCAACTGGGATGGTCTGTCTTaGTATCTTCTGGCCTTCTCTTCAGAAGTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SWKTAFNWDGLS*YLLAFSSEVSV Trigger: AACTGAGACTTCTGAAGAGAAGGCCAGAAGATACAAAGACAGACCATCCCAGTTGAATGCTGTCTTCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000243644.9 ENST00000593596.1 ENST00000594929.5 ENST00000597555.1 ENST00000597788.5 ENST00000598254.1 ENST00000600703.5 ENST00000601430.5 |
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| CDS CAA 72 bp | GATATTCCAGAAGCCCAGAGCTCACCCTCCATTAGCTaGAACACAAAGGCCAAAACTCCCTTTGTTCAATTA | + |
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Preference number: 6 (lower is better) Translates to: DIPEAQSSPSIS*NTKAKTPFVQL Trigger: TAATTGAACAAAGGGAGTTTTGGCCTTTGTGTTCAAGCTAATGGAGGGTGAGCTCTGGGCTTCTGGAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 72 bp | AACACCAGTTCAGCTATCTGTTCATTGAGAACCATTTaGAAGTCCTGGAATCCTGCCATATTCCCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: NTSSAICSLRTI*KSWNPAIFPGC Trigger: ACATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAACTGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 72 bp | ATATTCCAGAAGCCCAGAGCTCACCCTCCATTAGCTTaGACACAAAGGCCAAAACTCCCTTTGTTCAATTAT | + |
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Preference number: 6 (lower is better) Translates to: IFQKPRAHPPLA*TQRPKLPLFNY Trigger: ATAATTGAACAAAGGGAGTTTTGGCCTTTGTGTTCAAGCTAATGGAGGGTGAGCTCTGGGCTTCTGGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS CAA 72 bp | AAACACCAGTTCAGCTATCTGTTCATTGAGAACCATTaGAAAGTCCTGGAATCCTGCCATATTCCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: KHQFSYLFIENH*KVLESCHIPRM Trigger: CATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAACTGGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS TCA 72 bp | GAACCACTGAAGAAATTTCCTGAGACCAAAGTGCCATaGAATAATGGCAACCCCCAGGAAGTAATCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: EPLKKFPETKVP*NNGNPQEVICF Trigger: AAAACAGATTACTTCCTGGGGGTTGCCATTATTTCATGGCACTTTGGTCTCAGGAAATTTCTTCAGTGGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS GCA 72 bp | AGGATGTCTAGGTTTTATTCCAAGTTAAATCCAGACTaGCACAAGGCTGAAATTAACTTGTGTTGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RMSRFYSKLNPD*HKAEINLCWSL Trigger: CAGGGACCAACACAAGTTAATTTCAGCCTTGTGGCAGTCTGGATTTAACTTGGAATAAAACCTAGACATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS GCA 72 bp | CTGTTCATTGAGAACCATTTGAAAGTCCTGGAATCCTaGCATATTCCCAGGATGTCTAGGTTTTATTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LFIENHLKVLES*HIPRMSRFYSK Trigger: CTTGGAATAAAACCTAGACATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS CAA 90 bp | CTGATGCTTGGGACTGATGAATTGGGACTTAGTGCTGATGAGTTTTaGACTTGCAGGGAATTTAATTGCAGTATGAAGTCGTTCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: LMLGTDELGLSADEF*TCREFNCSMKSFMV Trigger: AACCATGAACGACTTCATACTGCAATTAAATTCCCTGCAAGTCAAAAACTCATCAGCACTAAGTCCCAATTCATCAGTCCCAAGCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000243644.9 ENST00000601430.5 |
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| CDS CAA 90 bp | TCTATATTCAAACACCAGTTCAGCTATCTGTTCATTGAGAACCATTaGAAAGTCCTGGAATCCTGCCATATTCCCAGGATGTCTAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SIFKHQFSYLFIENH*KVLESCHIPRMSRF Trigger: AAACCTAGACATCCTGGGAATATGGCAGGATTCCAGGACTTTCAAATGGTTCTCAATGAACAGATAGCTGAACTGGTGTTTGAATATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS GCA 72 bp | GATTTTCTTGTGACATTGGCTGTCAGAGATATTAGATaGAAGCTGACAGCTAATATAATCCACAGGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: DFLVTLAVRDIR*KLTANIIHRIL Trigger: GAGGATCCTGTGGATTATATTAGCTGTCAGCTTGCATCTAATATCTCTGACAGCCAATGTCACAAGAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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| CDS CAA 72 bp | AGGACATACCATGTAAATTATGATTTTCTTGTGACATaGGCTGTCAGAGATATTAGATGCAAGCTGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: RTYHVNYDFLVT*AVRDIRCKLTA Trigger: AGCTGTCAGCTTGCATCTAATATCTCTGACAGCCAATGTCACAAGAAAATCATAATTTACATGGTATGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597555.1 |
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