RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF343 (Homo sapiens)

Ensembl gene IDs: ENSG00000088876

Ensembl transcript IDs: ENST00000278772.9, ENST00000358413.6, ENST00000381253.5, ENST00000421216.1, ENST00000445484.5, ENST00000465019.1, ENST00000612935.4, ENST00000617391.4, ENST00000674000.1

Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCAGAAGGTACCCCTGCAAAGGTGCATTGCCCCTGTGGTGCATaGAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATC +
Preference number: 1 (lower is better)
Translates to: GPEGTPAKVHCPCGA*SSLWLRVSSRAECI
Trigger: GATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACCTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 90 bp TTGAGTCAAGGGTTGGGGCCAGAAGGTACCCCTGCAAAGGTGCATTaGCCCTGTGGTGCATGCAGCTCCCTGTGGCTGAGAGTGAGTTCC +
Preference number: 1 (lower is better)
Translates to: LSQGLGPEGTPAKVH*PCGACSSLWLRVSS
Trigger: GGAACTCACTCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACCTTCTGGCCCCAACCCTTGACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 90 bp GGTGCATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTaGATCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTC +
Preference number: 1 (lower is better)
Translates to: GACSSLWLRVSSRAE*ISGMHLCQQQHCSL
Trigger: GAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 90 bp CAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTaGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: QLPVAESEFQSGVHL*NASLPAATLFSQAA
Trigger: AGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 90 bp ACTGGGCAGAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTaGTCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTC +
Preference number: 1 (lower is better)
Translates to: TGQRKKLTCNVSATQ*SFSSMGISGSGMTF
Trigger: GAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTCTGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 90 bp CAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCC +
Preference number: 1 (lower is better)
Translates to: QSSTVSPHADSPCGV*SQKLCPYILQTKTS
Trigger: GGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACACCACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 90 bp GTACTCTATACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCT +
Preference number: 1 (lower is better)
Translates to: VLYTHKAPLLNVSLP*LIRADTSLELHSQS
Trigger: AGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGTATAGAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 90 bp ATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAA +
Preference number: 1 (lower is better)
Translates to: IWAELHSVPTCRFSL*CVITKALPIHPTNK
Trigger: TTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACACCACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 90 bp AACTTCTCTCCTAAGTGTGTCCTTTTGTGCATGCTCAAGGCTGACTaGTGGCTACAGTTGCCCGTACTCTATACTCATAAGGCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: NFSPKCVLLCMLKAD*WLQLPVLYTHKAPL
Trigger: GAGAGGAGCCTTATGAGTATAGAGTACGGGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCACAAAAGGACACACTTAGGAGAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 90 bp TTGTCCATTCTCCCCACACATGCAGAATTTCTATTCAATATACTCTaGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTTATCTACAC +
Preference number: 1 (lower is better)
Translates to: LSILPTHAEFLFNIL*GLLRGDSWLKPYLH
Trigger: GTGTAGATAAGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAATTCTGCATGTGTGGGGAGAATGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGGTGCATGCTCAAGGCTaGCTGATGGCTACAGTTGCC +
Preference number: 2 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLVHAQG*LMATVA
Trigger: GGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCAC...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGGGGTGACTCATGGCTaGAGCCTTATCTACACTCCT +
Preference number: 2 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVGVTHG*SLIYTP
Trigger: AGGAGTGTAGATAAGGCTTCAGCCATGAGTCACCCC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CAA 90 bp AGTGAGGTAGTGACTTGGGGTAGCAAGACTGTCCTCCTAAGTCAGTaGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SEVVTWGSKTVLLSQ*RSDIGMKLHPQALP
Trigger: GGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAACTGACTTAGGAGGACAGTCTTGCTACCCCAAGTCACTACCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 2 (lower is better)
Translates to: SLECISASSNTVLSSSWGIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACA +
Preference number: 2 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLNVSLP*LIRADT
Trigger: TGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGTGTCCTTTTGTGCATaGTCAAGGCTGACTGATGGC +
Preference number: 2 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVVSFCA*SRLTDG
Trigger: GCCATCAGTCAGCCTTGAGCATGCACAAAAGGACAC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGLPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTCTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: SLECISASSNTVLSSSWGLPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCAGTGCATCTCTGGAATaGATCTCTGCCAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVSASLE*ISASSN
Trigger: GTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACT...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGACCTGCAATGTGTCTaGAACCCAGTGATCCTTCAG +
Preference number: 2 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVDLQCV*NPVILQ
Trigger: CTGAAGGATCACTGGGTTGCAGACACATTGCAGGTC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGGGTGCATTGCCCCTGTaGTGCATGCAGCTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEGALPL*CMQLPV
Trigger: CACAGGGAGCTGCATGCACCACAGGGGCAATGCACC...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTT +
Preference number: 2 (lower is better)
Translates to: APLLNVSLPCLIRADTSLLRSCS*PLHTQV
Trigger: AACCTGTGTATGCAGGGGTCATGAACAAGACCTGAG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATATGCTCAAGGCTGACTaGTGGCTACAGTTGCCCGTA +
Preference number: 2 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNMLKAD*WLQLPV
Trigger: TACGGGCAACTGTAGCCATCAGTCAGCCTTGAGCAT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 2 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 2 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLLVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCTCTGGAATGCATCTCTaGCAGCAGCAACACTGTTCT +
Preference number: 2 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVSGMHL*QQQHCS
Trigger: AGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGA...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCCCCATGTGTCTCTCTaGGGTAACATGAGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNPHVSL*GNMRLD
Trigger: GTCAAGCCTCATGTTACCCCAGAGAGACACATGGGG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACCTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTT +
Preference number: 2 (lower is better)
Translates to: THKAPLLNVSLPCLIRADLRSCS*PLHTQV
Trigger: AACCTGTGTATGCAGGGGTCATGAACAAGACCTGAG...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCA +
Preference number: 2 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGLSGVT*GLTGHS
Trigger: TGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCA +
Preference number: 2 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELSGVT*GLTGHS
Trigger: TGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAG...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCTGAGGGCCACTCTGTaGCTGAGTGTCCATTCTTTT +
Preference number: 2 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNLRATL*LSVHSF
Trigger: AAAAGAATGGACACTCAGGCACAGAGTGGCCCTCAG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTCCTGAAAAGGTCATCTaGGCAGAGCTCCACAGTGTC +
Preference number: 2 (lower is better)
Translates to: SLECISASSNTVLSSSWGPEKVI*AELHSV
Trigger: GACACTGTGGAGCTCTGCCCAGATGACCTTTTCAGG...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTT +
Preference number: 2 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELRSCS*PLHTQV
Trigger: AACCTGTGTATGCAGGGGTCATGAACAAGACCTGAG...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPMPDKG*HISGTS
Trigger: TGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCAT...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 2 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGAAGGGTGCTTTCCCCTaGGGCTGTCATTGGATGTCT +
Preference number: 2 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVKGAFP*GCHWMS
Trigger: AGACATCCAATGACAGCCTCAGGGGAAAGCACCCTT...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTTCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: SLECISASSNTVLSSSWGSPCGV*SQKLCP
Trigger: TGGGCAAAGCTTTTGTGATCACACACCACAGGGAGA...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 2 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGLVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGGTGTCCTTTTGTGCATaGTCAAGGCTGACTGATGGC +
Preference number: 2 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEVSFCA*SRLTDG
Trigger: GCCATCAGTCAGCCTTGAGCATGCACAAAAGGACAC...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACATGAGGCTTGACTaGTCACTCAGGTCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLNMRLD*SLRSCS
Trigger: TGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCCCATGTGTCTCTCTaGGGTAACATGAGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVPHVSL*GNMRLD
Trigger: GTCAAGCCTCATGTTACCCCAGAGAGACACATGGGG...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCCTGAAAAGGTCATCTaGGCAGAGCTCCACAGTGTC +
Preference number: 2 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEPEKVI*AELHSV
Trigger: GACACTGTGGAGCTCTGCCCAGATGACCTTTTCAGG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CAA 90 bp GTCCCCACATGCAGATTCTCCCTGTGGTGTGTGATCACAAAAGCTTaGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: VPTCRFSLWCVITKA*PIHPTNKDLLPEGH
Trigger: GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACACCACAGGGAGAATCTGCATGTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: SLECISASSNTVLSSSWGMPDKG*HISGTS
Trigger: TGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCAT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEMPDKG*HISGTS
Trigger: TGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCAT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGATGCTCAAGGCTGACTaGTGGCTACAGTTGCCCGTA +
Preference number: 2 (lower is better)
Translates to: KLCPYILQTKTSFLRATLMLKAD*WLQLPV
Trigger: TACGGGCAACTGTAGCCATCAGTCAGCCTTGAGCAT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGTGCATGCTCAAGGCTaGCTGATGGCTACAGTTGCC +
Preference number: 2 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPVHAQG*LMATVA
Trigger: GGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCAC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 2 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGAGTGCATCTCTGGAATaGATCTCTGCCAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: PVILQFDGDLWIWNDLLESASLE*ISASSN
Trigger: GTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACT...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 2 (lower is better)
Translates to: KLCPYILQTKTSFLRATLCPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLESPCGV*SQKLCP
Trigger: TGGGCAAAGCTTTTGTGATCACACACCACAGGGAGA...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGACTGATGGCTACAGTTaGCCGTACTCTATACTCATA +
Preference number: 2 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVTDGYS*PYSILI
Trigger: TATGAGTATAGAGTACGGGCAACTGTAGCCATCAGT...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCACAGTGTCCCCACATaGAGATTCTCCCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPHSVPT*RFSLWC
Trigger: ACACCACAGGGAGAATCTGCATGTGGGGACACTGTG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGAACATGAGGCTTGACTaGTCACTCAGGTCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGNMRLD*SLRSCS
Trigger: TGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTGCATGCAGCTCCCTGTaGCTGAGAGTGAGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFACSSL*LRVSSR
Trigger: TCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGC...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 2 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHCPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 2 (lower is better)
Translates to: KLCPYILQTKTSFLRATLGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTCTGCGGGGTGACTCATaGCTGAAGCCTTATCTACAC +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFLRGDS*LKPYLH
Trigger: GTGTAGATAAGGCTTCAGCCATGAGTCACCCCGCAG...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCAAGGGTGCTTTCCCCTaGGGCTGTCATTGGATGTCT +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSKGAFP*GCHWMS
Trigger: AGACATCCAATGACAGCCTCAGGGGAAAGCACCCTT...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTTCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFSPCGV*SQKLCP
Trigger: TGGGCAAAGCTTTTGTGATCACACACCACAGGGAGA...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTAAGTCAGTTGAGGAGTaGCATCGGGATGAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFKSVEE*HRDEAP
Trigger: TGGAGCTTCATCCCGATGTCACTCCTCAACTGACTT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACA +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSNVSLP*LIRADT
Trigger: TGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTT...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGACTGATGGCTACAGTTaGCCGTACTCTATACTCATA +
Preference number: 2 (lower is better)
Translates to: PVILQFDGDLWIWNDLLETDGYS*PYSILI
Trigger: TATGAGTATAGAGTACGGGCAACTGTAGCCATCAGT...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 2 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATTGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCT +
Preference number: 2 (lower is better)
Translates to: EEEADLQCVCNPVILQFDCRFSL*CVITKA
Trigger: AGCTTTTGTGATCACACACCACAGGGAGAATCTGCA...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGATCCTTCAGTTCGATaGGGATCTCTGGATCTGGAA +
Preference number: 2 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPDPSVR*GSLDLE
Trigger: TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CAA 90 bp ACATGTCTTAGAATCAATTATCTGGACAGACAACGAGACAGAAAATaGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: TCLRINYLDRQRDRK*RIHWGVRAGLGRGR
Trigger: TCTTCCTCTGCCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTGTCCAGATAATTGATTCTAAGACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGATGTCTGGTAAATGTTaGTTATTGCTAAAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEMSGKC*LLLKPS
Trigger: GGAAGGCTTTAGCAATAATCAACATTTACCAGACAT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSCPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR GCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSLVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTGATCCTTCAGTTCGATaGGGATCTCTGGATCTGGAA +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFDPSVR*GSLDLE
Trigger: TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTAACATGAGGCTTGACTaGTCACTCAGGTCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFNMRLD*SLRSCS
Trigger: TGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTATGTCTGGTAAATGTTaGTTATTGCTAAAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFMSGKC*LLLKPS
Trigger: GGAAGGCTTTAGCAATAATCAACATTTACCAGACAT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCATGTCTGGTAAATGTTaGTTATTGCTAAAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSMSGKC*LLLKPS
Trigger: GGAAGGCTTTAGCAATAATCAACATTTACCAGACAT...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp GGGTTGGGGCCAGAAGGTACCCCTGCAAAGGTGCATTaGCCCTGTGGTGCATGCAGCTCCCTGTGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: GLGPEGTPAKVH*PCGACSSLWLR
Trigger: TCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACCTTCTGGCCCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp GGTACCCCTGCAAAGGTGCATTGCCCCTGTGGTGCATaGAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCG +
Preference number: 3 (lower is better)
Translates to: GTPAKVHCPCGA*SSLWLRVSSRA
Trigger: CGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 72 bp GCCAGAAGGTACCCCTGCAAAGGTGCATTGCCCCTGTaGTGCATGCAGCTCCCTGTGGCTGAGAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: ARRYPCKGALPL*CMQLPVAESEF
Trigger: GAACTCACTCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp AGAAGGTACCCCTGCAAAGGTGCATTGCCCCTGTGGTaGATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: RRYPCKGALPLW*MQLPVAESEFQ
Trigger: CTGGAACTCACTCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCAATGCACCTTTGCAGGGGTACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp AGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTaGATCTCTGGAATGCATCTCTGCCAGCAGCAACAC +
Preference number: 3 (lower is better)
Translates to: SSLWLRVSSRAE*ISGMHLCQQQH
Trigger: GTGTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CAA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCCCTGCAAAGGTGCATaGCCCCTGTGGTGCATGCAG +
Preference number: 3 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEPCKGA*PLWCMQ
Trigger: CTGCATGCACCACAGGGGCAATGCACCTTTGCAGGG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp CAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTaGAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: QHCSLKQLGCYP*KGHLGRAPQCP
Trigger: GGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp AGTTCCAGAGCGGAGTGCATCTCTGGAATGCATCTCTaGCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSRAECISGMHL*QQQHCSLKQLG
Trigger: CCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACTCCGCTCTGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 72 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTaGGGTGTTACCCCTGAAAAGGTCATCTGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: ISASSNTVLSSS*GVTPEKVIWAE
Trigger: CTCTGCCCAGATGACCTTTTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CAA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCCCTGCAAAGGTGCATaGCCCCTGTGGTGCATGCAG +
Preference number: 3 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPPCKGA*PLWCMQ
Trigger: CTGCATGCACCACAGGGGCAATGCACCTTTGCAGGG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp CAGGGTCTACTCCCCATGTGTCTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCAGGTCTTGTTCATGAC +
Preference number: 3 (lower is better)
Translates to: QGLLPMCLSGVT*GLTGHSGLVHD
Trigger: GTCATGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAGACACATGGGGAGTAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACATCTCTGGAACTTCAC +
Preference number: 3 (lower is better)
Translates to: THKAPLLNVSLP*LIRADTSLELH
Trigger: GTGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CAA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTGGTCACTCAGGTCTaGTTCATGACCCCTGCATAC +
Preference number: 3 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELVTQV*FMTPAY
Trigger: GTATGCAGGGGTCATGAACAAGACCTGAGTGACCAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CAA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCTGGTCACTCAGGTCTaGTTCATGACCCCTGCATAC +
Preference number: 3 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVLVTQV*FMTPAY
Trigger: GTATGCAGGGGTCATGAACAAGACCTGAGTGACCAG...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR-3UTR CAA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCTGGTCACTCAGGTCTaGTTCATGACCCCTGCATAC +
Preference number: 3 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLVTQV*FMTPAY
Trigger: GTATGCAGGGGTCATGAACAAGACCTGAGTGACCAG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp GATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATaGCCTTCTGGAGTTGTCCCCGTTGAGTCAAGGGTT +
Preference number: 3 (lower is better)
Translates to: DPSVRWGSLDLE*PSGVVPVESRV
Trigger: AACCCTTGACTCAACGGGGACAACTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp AGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTaGTCCTTCAGTTCGATGGGGATCTCTGGATCTGGA +
Preference number: 3 (lower is better)
Translates to: RKKLTCNVSATQ*SFSSMGISGSG
Trigger: TCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 72 bp GAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCTTTGCCCATACATCCT +
Preference number: 3 (lower is better)
Translates to: ELHSVPTCRFSL*CVITKALPIHP
Trigger: AGGATGTATGGGCAAAGCTTTTGTGATCACACACCACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 72 bp CCTGAAAATCCCTCAGAGGTGAGTGAGGTAGTGACTTaGGGTAGCAAGACTGTCCTCCTAAGTCAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: PENPSEVSEVVT*GSKTVLLSQLR
Trigger: CCTCAACTGACTTAGGAGGACAGTCTTGCTACCCCAAGTCACTACCTCACTCACCTCTGAGGGATTTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp TCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCACTCACAATCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SPERVPPMPDKG*HISGTSLTICV
Trigger: TACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR GCA 72 bp CTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTaGCTGAGTGTCCATTCTTTTACTGATGCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: LQTKTSFLRATL*LSVHSFTDAPQ
Trigger: TTGGGGAGCATCAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CCA 72 bp CTCCCCACACATGCAGAATTTCTATTCAATATACTCTaGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCT +
Preference number: 3 (lower is better)
Translates to: LPTHAEFLFNIL*GLLRGDSWLKP
Trigger: AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAATTCTGCATGTGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp ACAGTGTCCCCACATGCAGATTCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCATACATCCTACAAACA +
Preference number: 3 (lower is better)
Translates to: TVSPHADSPCGV*SQKLCPYILQT
Trigger: TGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACACCACAGGGAGAATCTGCATGTGGGGACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR TCA 72 bp ATTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTaGCTCATGGCTGAAGCCTTATCTACACTCCTTATA +
Preference number: 3 (lower is better)
Translates to: ISIQYTLGLTAG*LMAEALSTLLI
Trigger: TATAAGGAGTGTAGATAAGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGGACCAGAGCCAGCGTaGCCGGGATCTCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVGPEPA*PGSRPP
Trigger: CGGTGGCCGAGATCCCGGGCACGCTGGCTCTGGTCC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGGGACCAGAGCCAGCGTaGCCGGGATCTCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEGPEPA*PGSRPP
Trigger: CGGTGGCCGAGATCCCGGGCACGCTGGCTCTGGTCC...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR TCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGGGCTTACTGCGGGGTaGCTCATGGCTGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVGLTAG*LMAEAL
Trigger: TAAGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGTGCCCCTGTGGTGCATaGAGCTCCCTGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLCPCGA*SSLWLR
Trigger: TCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCA...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCGGAGAAGGTGGACCGTaGGGCTGGGTTTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPGEGGP*GWVSRS
Trigger: AGAACGCGAAACCCAGCCTCACGGTCCACCTTCTCC...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGTTCTGGCTCCCGAGTaGAGTCTCTGTCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADVLAPE*SLCPLG
Trigger: GCCAAGGGGACAGAGACTTCACTCGGGAGCCAGAAC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR GCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGCATTGCCCCTGTGGTaGATGCAGCTCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADALPLW*MQLPVA
Trigger: AGCCACAGGGAGCTGCATGCACCACAGGGGCAATGC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGCATGCAGCTCCCTGTaGCTGAGAGTGAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVACSSL*LRVSSR
Trigger: TCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGGCCCAGTGTGTGCCTTaGAATTCTGCCAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLAQCVP*NSARGP
Trigger: TGGACCTCTGGCAGAATTTCAAGGCACACACTGGGC...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCAAGGGTGCTTTCCCCTaGGGCTGTCATTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVKGAFP*GCHWMS
Trigger: AGACATCCAATGACAGCCTCAGGGGAAAGCACCCTT...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGGGGCTTACTGCGGGGTaGCTCATGGCTGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVGLTAG*LMAEAL
Trigger: TAAGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCC...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCCCAGCTTGTTTCCCTaGAGCCAGGACCTGATAGGA +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLPSLFP*SQDLIG
Trigger: TCCTATCAGGTCCTGGCTGCAGGGAAACAAGCTGGG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278772.9
CDS-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCCCCTGCTGTTTCCAATaGCCTGGGCTAGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVPCCFQ*PGLEFP
Trigger: AGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGG...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCCTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPLPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNLPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAATGCCCCTGTGGTGCATaGAGCTCCCTGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPECPCGA*SSLWLR
Trigger: TCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCA...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTTGCCCCTGTGGTGCATaGAGCTCCCTGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGCPCGA*SSLWLR
Trigger: TCTCAGCCACAGGGAGCTGCATGCACCACAGGGGCA...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGCATTGCCCCTGTGGTaGATGCAGCTCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGALPLW*MQLPVA
Trigger: AGCCACAGGGAGCTGCATGCACCACAGGGGCAATGC...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTAGGGATTGGAGAAGGTaGACCAGAGCCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGRDWRR*TRASVP
Trigger: GGGCACGCTGGCTCTGGTCCACCTTCTCCAATCCCT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGTCTTTGGAGTGGGCTaGGGAATGCCCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVVFGVG*GMPLRF
Trigger: AAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGAC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCCCCCATGTGTCTCTCTaGGGTAACATGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVPHVSL*GNMRLD
Trigger: GTCAAGCCTCATGTTACCCCAGAGAGACACATGGGG...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGGGCTTCGGCTCCCATTaGCCGCCACAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEGFGSH*PPQSHF
Trigger: GAAGTGGCTCTGTGGCGGCCAATGGGAGCCGAAGCC...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCGCCCAGTGTGTGCCTTaGAATTCTGCCAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPAQCVP*NSARGP
Trigger: TGGACCTCTGGCAGAATTTCAAGGCACACACTGGGC...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAGGGTGCTTTCCCCTaGGGCTGTCATTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLKGAFP*GCHWMS
Trigger: AGACATCCAATGACAGCCTCAGGGGAAAGCACCCTT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCTCTCCCTGTGGTGTGTaGTCACAAAAGCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVSPCGV*SQKLCP
Trigger: TGGGCAAAGCTTTTGTGATCACACACCACAGGGAGA...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGTCTCTGGATCTGGAATaGCCTTCTGGAGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLSLDLE*PSGVVP
Trigger: GGGGACAACTCCAGAAGGTCATTCCAGATCCAGAGA...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGGGCTTACTGCGGGGTaGCTCATGGCTGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGGLTAG*LMAEAL
Trigger: TAAGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCC...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGGGAGTGACATCGGGATaGAGCTCCACCCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEGVTSG*SSTHKP
Trigger: GGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCC...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTCTCTCCTCTGTCCTTaGAGACCAGGGTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPSLLCP*RPGFGA
Trigger: GGCTCCAAACCCTGGTCTGCAAGGACAGAGGAGAGA...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCAGGAAGAAGCTGACCTaGAATGTGTCTGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVRKKLT*NVSATQ
Trigger: CTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCT...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCCTGTTTCCAATGCCCTaGGCTAGAATTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVLFPMP*ARIPWM
Trigger: CATCCAGGGAATTCTAGCCCAGGGCATTGGAAACAG...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGACAGGGTTTGGTCTTTaGGCTGAGCTGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLTGFGL*AELGSV
Trigger: AACAGAGCCCAGCTCAGCCCAAAGACCAAACCCTGT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGCCTGAAAAGGTCATCTaGGCAGAGCTCCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLPEKVI*AELHSV
Trigger: GACACTGTGGAGCTCTGCCCAGATGACCTTTTCAGG...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGGGTGCATTGCCCCTGTaGTGCATGCAGCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVGALPL*CMQLPV
Trigger: CACAGGGAGCTGCATGCACCACAGGGGCAATGCACC...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCCTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPLSGVT*GLTGHS
Trigger: TGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAG...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGGCAGAGGAAGAAGCTaGCCTGCAATGTGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADGRGRS*PAMCLQ
Trigger: TTGCAGACACATTGCAGGTCAGCTTCTTCCTCTGCC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCCCCTGCTGTTTCCAATaGCCTGGGCTAGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPPCCFQ*PGLEFP
Trigger: AGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGG...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGTCTCTCCTCTGTCCTTaGAGACCAGGGTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPESLLCP*RPGFGA
Trigger: GGCTCCAAACCCTGGTCTGCAAGGACAGAGGAGAGA...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNNVSLP*LIRADT
Trigger: TGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCACAGTGTCCCCACATaGAGATTCTCCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNHSVPT*RFSLWC
Trigger: ACACCACAGGGAGAATCTGCATGTGGGGACACTGTG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGGACCTGCAATGTGTCTaGAACCCAGTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLDLQCV*NPVILQ
Trigger: CTGAAGGATCACTGGGTTGCAGACACATTGCAGGTC...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGATAAGGCAACATCATaGCGCCAGAGTCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADDKATS*RQSQPS
Trigger: ACTGGGCTGACTCTGGCGCCATGATGTTGCCTTATC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGCTGTTTCCAATGCCCTaGGCTAGAATTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLLFPMP*ARIPWM
Trigger: CATCCAGGGAATTCTAGCCCAGGGCATTGGAAACAG...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACCAACAGCTTACATaGGAATACTGCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLNQQLT*EYCCPC
Trigger: GCAGGGGCAGCAGTATTCCCATGTAAGCTGTTGGTT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGCTTGCTGACTGTCTTTaGAGTGGGCTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPELADCL*SGLGNA
Trigger: GGCATTCCCCAGCCCACTCCAAAGACAGTCAGCAAG...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGGCATGCAGCTCCCTGTaGCTGAGAGTGAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGACSSL*LRVSSR
Trigger: TCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGC...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAGGTGCATTGCCCCTGTaGTGCATGCAGCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEGALPL*CMQLPV
Trigger: CACAGGGAGCTGCATGCACCACAGGGGCAATGCACC...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGATCTCTTCCCAGTATTaGTCTCCCAGTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLISSQY*SPSAEG
Trigger: TCCTTCAGCACTGGGAGATCAATACTGGGAAGAGAT...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTT +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNLRSCS*PLHTQV
Trigger: AACCTGTGTATGCAGGGGTCATGAACAAGACCTGAG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGGTGCATGCTCAAGGCTaGCTGATGGCTACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEVHAQG*LMATVA
Trigger: GGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCAC...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGGTGCATGCTCAAGGCTaGCTGATGGCTACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVVHAQG*LMATVA
Trigger: GGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCAC...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACCAGAGGTCTTCTCCCTaGGTGTGTCCTCCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADQRSSP*VCPPLV
Trigger: TACTAAAGGAGGACACACTCAGGGAGAAGACCTCTG...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCCAGAGGTCTTCTCCCTaGGTGTGTCCTCCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPQRSSP*VCPPLV
Trigger: TACTAAAGGAGGACACACTCAGGGAGAAGACCTCTG...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGGAGTGACATCGGGATaGAGCTCCACCCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPGVTSG*SSTHKP
Trigger: GGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGAAGTCAGTTGAGGAGTaGCATCGGGATGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVKSVEE*HRDEAP
Trigger: TGGAGCTTCATCCCGATGTCACTCCTCAACTGACTT...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCACATGGGAATACTGCTaGCCCTGCTGTTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPTWEYC*PCCFQC
Trigger: GCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGT...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGTCTCTCCTCTGTCCTTaGAGACCAGGGTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVSLLCP*RPGFGA
Trigger: GGCTCCAAACCCTGGTCTGCAAGGACAGAGGAGAGA...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPLVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPENVSLP*LIRADT
Trigger: TGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGGCATTGCCCCTGTGGTaGATGCAGCTCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGALPLW*MQLPVA
Trigger: AGCCACAGGGAGCTGCATGCACCACAGGGGCAATGC...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCGACCTGCAATGTGTCTaGAACCCAGTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPDLQCV*NPVILQ
Trigger: CTGAAGGATCACTGGGTTGCAGACACATTGCAGGTC...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATAGGAAGAAGCTGACCTaGAATGTGTCTGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNRKKLT*NVSATQ
Trigger: CTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCTGTGGCAGGAGAATTaGTTGAACCCGGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGLWQEN*LNPGGK
Trigger: TTTGCCTCCCGGGTTCAAGCAATTCTCCTGCCACAG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR CCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGGATAAGGCAACATCATaGCGCCAGAGTCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGDKATS*RQSQPS
Trigger: ACTGGGCTGACTCTGGCGCCATGATGTTGCCTTATC...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGGTCTTTGGAGTGGGCTaGGGAATGCCCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEVFGVG*GMPLRF
Trigger: AAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGAC...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCTTGCTGACTGTCTTTaGAGTGGGCTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVLADCL*SGLGNA
Trigger: GGCATTCCCCAGCCCACTCCAAAGACAGTCAGCAAG...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGGTCTTTGGGCTGAGCTaGGCTCTGTTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEVFGLS*ALFLPP
Trigger: TGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGAC...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGTCTGAATGTGTTCTCTaGTGTCTGCTGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLSECVL*CLLRLD
Trigger: GTCCAACCTCAGCAGACACCAGAGAACACATTCAGA...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGGCATGCAGCTCCCTGTaGCTGAGAGTGAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLEACSSL*LRVSSR
Trigger: TCTGGAACTCACTCTCAGCCACAGGGAGCTGCATGC...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGGTGCATTGCCCCTGTaGTGCATGCAGCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPGALPL*CMQLPV
Trigger: CACAGGGAGCTGCATGCACCACAGGGGCAATGCACC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
3UTR CAA 72 bp GTGACTTGGGGTAGCAAGACTGTCCTCCTAAGTCAGTaGAGGAGTGACATCGGGATGAAGCTCCACCCACAA +
Preference number: 4 (lower is better)
Translates to: VTWGSKTVLLSQ*RSDIGMKLHPQ
Trigger: TTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAACTGACTTAGGAGGACAGTCTTGCTACCCCAAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGTTCTGCTGCCTGTGGTaGCTTCTTCCAACCTTAATT +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLFCCLW*LLPTLI
Trigger: AATTAAGGTTGGAAGAAGTCACCACAGGCAGCAGAA...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATGAAGTACATGTTGACTaGGGAACTGCTGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNEVHVD*GTADRR
Trigger: TCTCCTGTCAGCAGTTCCTCAGTCAACATGTACTTC...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACTTCCCTGGATGGAAGTaGTTTTCTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADFPGWK*FSAHKP
Trigger: GGGCTTATGTGCAGAAAATCACTTCCATCCAGGGAA...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGTTCCCTGGATGGAAGTaGTTTTCTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVFPGWK*FSAHKP
Trigger: GGGCTTATGTGCAGAAAATCACTTCCATCCAGGGAA...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGTGTCTGATGAGGGTTaGTCTATCTTTAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVVSDEG*SIFKAS
Trigger: CGAAGCTTTAAAGATAGATCAACCCTCATCAGACAC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELSGVT*GLTGHS
Trigger: TGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADMPDKG*HISGTS
Trigger: TGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCAT...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTATAAGGCTCCTCTCCTaGACGTGTCCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPIRLLS*TCPSHA
Trigger: GGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTAT...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGATGCTCAAGGCTGACTaGTGGCTACAGTTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVMLKAD*WLQLPV
Trigger: TACGGGCAACTGTAGCCATCAGTCAGCCTTGAGCAT...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGTGCATGCTCAAGGCTaGCTGATGGCTACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDVHAQG*LMATVA
Trigger: GGCAACTGTAGCCATCAGTCAGCCTTGAGCATGCAC...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAATGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPECPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGTGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGCPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGTCTCTGGATCTGGAATaGCCTTCTGGAGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVSLDLE*PSGVVP
Trigger: GGGGACAACTCCAGAAGGTCATTCCAGATCCAGAGA...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTAGTCAGCCCAGTGTGTaGCTTGAAATTCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGSQPSV*LEILPE
Trigger: CTCTGGCAGAATTTCAAGGCACACACTGGGCTGACT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAACATGGGAATACTGCTaGCCCTGCTGTTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPETWEYC*PCCFQC
Trigger: GCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGT...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCAAGCCTTTGTCTAGCTaGACAGGGTTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPKPLSS*TGFGLW
Trigger: CCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTT...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPELVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGAACGTGTCCCTCCCATaGCTGATAAGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVNVSLP*LIRADT
Trigger: TGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTT...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTGTCCTTTTGTGCATaGTCAAGGCTGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGVSFCA*SRLTDG
Trigger: GCCATCAGTCAGCCTTGAGCATGCACAAAAGGACAC...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTCTGAGGGCCACTCTGTaGCTGAGTGTCCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGLRATL*LSVHSF
Trigger: AAAAGAATGGACACTCAGGCACAGAGTGGCCCTCAG...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGCAGGACAGTGACCACTaGAGTGACAGCCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGQDSDH*SDSLSV
Trigger: GACGGAGAGGCTGTCACTGCAGTGGTCACTGTCCTG...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAGCCACTTCTGGGCCGTaGAACGGTTACTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEATSGP*NGYFSR
Trigger: CCTGGAAAAGTAACCGTTGCACGGCCCAGAAGTGGC...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTAGGGATTGGAGAAGGTaGACCAGAGCCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFRDWRR*TRASVP
Trigger: GGGCACGCTGGCTCTGGTCCACCTTCTCCAATCCCT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR CCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCATCGAGTGTATACGATaGTGTCTGATGAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVIECIR*CLMRVD
Trigger: ATCAACCCTCATCAGACACCATCGTATACACTCGAT...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGATCCTTCAGTTCGATaGGGATCTCTGGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADDPSVR*GSLDLE
Trigger: TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATGATCCTTCAGTTCGATaGGGATCTCTGGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNDPSVR*GSLDLE
Trigger: TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTGCGGGGTGACTCATaGCTGAAGCCTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELRGDS*LKPYLH
Trigger: GTGTAGATAAGGCTTCAGCCATGAGTCACCCCGCAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCACATACAGAGTACATaGGGGAGTCAAGACATTTCC +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLHIQST*GSQDIS
Trigger: GGAAATGTCTTGACTCCCCCATGTACTCTGTATGTG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCCACAGAGCCACTTCTaGGCCGTGCAACGGTTACTT +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLPQSHF*AVQRLL
Trigger: AAGTAACCGTTGCACGGCCCAGAAGTGGCTCTGTGG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTTCTGCTGCCTGTGGTaGCTTCTTCCAACCTTAATT +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPFCCLW*LLPTLI
Trigger: AATTAAGGTTGGAAGAAGTCACCACAGGCAGCAGAA...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGGTGTCTGATGAGGGTTaGTCTATCTTTAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLVSDEG*SIFKAS
Trigger: CGAAGCTTTAAAGATAGATCAACCCTCATCAGACAC...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAATGCTCAAGGCTGACTaGTGGCTACAGTTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEMLKAD*WLQLPV
Trigger: TACGGGCAACTGTAGCCATCAGTCAGCCTTGAGCAT...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGTGTCCATTCTTTTACTaGTGCTCCCCAACACTCCCC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVCPFFY*CSPTLP
Trigger: GGGGAGTGTTGGGGAGCATCAGTAAAAGAATGGACA...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGGGCCACTCTGTGCCTaGGTGTCCATTCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLGPLCA*VSILLL
Trigger: CAGTAAAAGAATGGACACTCAGGCACAGAGTGGCCC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGGCAGAGGAAGAAGCTaGCCTGCAATGTGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLGRGRS*PAMCLQ
Trigger: TTGCAGACACATTGCAGGTCAGCTTCTTCCTCTGCC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGTGACTCATGGCTaGAGCCTTATCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDGVTHG*SLIYTP
Trigger: AGGAGTGTAGATAAGGCTTCAGCCATGAGTCACCCC...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGGGGTGACTCATGGCTaGAGCCTTATCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLGVTHG*SLIYTP
Trigger: AGGAGTGTAGATAAGGCTTCAGCCATGAGTCACCCC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCGGAGTGACATCGGGATaGAGCTCCACCCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSGVTSG*SSTHKP
Trigger: GGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCC...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATAGTCAAGACATTTCCTaGAAATCCCTCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNSQDIS*KSLRGE
Trigger: CTCACCTCTGAGGGATTTTCAGGAAATGTCTTGACT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACAGTCAAGACATTTCCTaGAAATCCCTCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADSQDIS*KSLRGE
Trigger: CTCACCTCTGAGGGATTTTCAGGAAATGTCTTGACT...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAACCCTGCTGTTTCCAATaGCCTGGGCTAGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEPCCFQ*PGLEFP
Trigger: AGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGG...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTTACATGGGAATACTaGTGCCCCTGCTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELTWEY*CPCCFQ
Trigger: TTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAG...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGAAGCCTTTGTCTAGCTaGACAGGGTTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEKPLSS*TGFGLW
Trigger: CCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTGAGGGCCACTCTGTaGCTGAGTGTCCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELRATL*LSVHSF
Trigger: AAAAGAATGGACACTCAGGCACAGAGTGGCCCTCAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGAGGAAGAAGCTGACCTaGAATGTGTCTGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLERKKLT*NVSATQ
Trigger: CTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCT...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATCCCAGCTTGTTTCCCTaGAGCCAGGACCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDPSLFP*SQDLGK
Trigger: TTTTCCAAGGTCCTGGCTGCAGGGAAACAAGCTGGG...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR CCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATACTGGTACCACTATTTaGGCCTTTCCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNTGTTI*AFPSFF
Trigger: GAAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGTCTTTGGAGTGGGCTaGGGAATGCCCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDVFGVG*GMPLRF
Trigger: AAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGAC...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGTCTTTGGGCTGAGCTaGGCTCTGTTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLVFGLS*ALFLPP
Trigger: TGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGAC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGACAGGGTTTGGTCTTTaGGCTGAGCTGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLTGFGL*AELGSV
Trigger: AACAGAGCCCAGCTCAGCCCAAAGACCAAACCCTGT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATTGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNCRFSL*CVITKA
Trigger: AGCTTTTGTGATCACACACCACAGGGAGAATCTGCA...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGCTATTCAATATACTCTaGGGCTTACTGCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPELFNIL*GLLRGD
Trigger: GTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAG...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCACATACAGAGTACATaGGGGAGTCAAGACATTTCC +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVHIQST*GSQDIS
Trigger: GGAAATGTCTTGACTCCCCCATGTACTCTGTATGTG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTTTGATCTCCCAGTGCTaGAGGATAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGLISQC*RIRQHH
Trigger: ATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAA...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCTTTGGTTCTGCCAATaGGAGAAGATTCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLLWFCQ*EKIPVI
Trigger: AATTACAGGAATCTTCTCTCATTGGCAGAACCAAAG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCATACTCTCTACAGTTaGTTGCTCCAAATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVHTLYS*LLQISR
Trigger: CCTTGAGATTTGGAGCAATCAACTGTAGAGAGTATG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGGTTTGTAATAAAGTTTaGTTCCAGGTTATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: APLLNVSLPCLIRADTSLVCNKV*FQVMVR
Trigger: CCGGACCATAACCTGGAATCAAACTTTATTACAAAC...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACGTGTTTTCTGAGGGTTaGCTTATCACAAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: THKAPLLNVSLPCLIRADVFSEG*LITKAS
Trigger: CGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACAC...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGTCCTCTGGTGTTTTCTaGGGGTTGACTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVSSGVF*GLTYHK
Trigger: TTTGTGATAAGTCAACCCTCAGAAAACACCAGAGGA...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATCTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTT +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDLRSCS*PLHTQV
Trigger: AACCTGTGTATGCAGGGGTCATGAACAAGACCTGAG...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCTCTCTGGGGTAACATaGGGCTTGACTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPLSGVT*GLTGHS
Trigger: TGAGTGACCAGTCAAGCCTCATGTTACCCCAGAGAG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTTCTCTGGATCTGGAATaGCCTTCTGGAGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPSLDLE*PSGVVP
Trigger: GGGGACAACTCCAGAAGGTCATTCCAGATCCAGAGA...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGGCAGAGGAAGAAGCTaGCCTGCAATGTGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPGRGRS*PAMCLQ
Trigger: TTGCAGACACATTGCAGGTCAGCTTCTTCCTCTGCC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGGGGGTGACTCATGGCTaGAGCCTTATCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGGVTHG*SLIYTP
Trigger: AGGAGTGTAGATAAGGCTTCAGCCATGAGTCACCCC...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATAAGTCAGTTGAGGAGTaGCATCGGGATGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDKSVEE*HRDEAP
Trigger: TGGAGCTTCATCCCGATGTCACTCCTCAACTGACTT...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGACATGGGAATACTGCTaGCCCTGCTGTTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLTWEYC*PCCFQC
Trigger: GCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTTACATGGGAATACTaGTGCCCCTGCTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELTWEY*CPCCFQ
Trigger: TTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATCTTGTTCATGACCCCTaGATACACAGGTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDLVHDP*IHRFLP
Trigger: CGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAG...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAGTGTCCTTTTGTGCATaGTCAAGGCTGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEVSFCA*SRLTDG
Trigger: GCCATCAGTCAGCCTTGAGCATGCACAAAAGGACAC...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCTCCCCAGACAAGGGTaGTTTCCCCTGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSLPRQG*FPLRLS
Trigger: TGACAGCCTCAGGGGAAAGCACCCTTGTCTGGGGAG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCTGAGGGCCACTCTGTaGCTGAGTGTCCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLRATL*LSVHSF
Trigger: AAAAGAATGGACACTCAGGCACAGAGTGGCCCTCAG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACCACAGTGTCCCCACATaGAGATTCTCCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHHSVPT*RFSLWC
Trigger: ACACCACAGGGAGAATCTGCATGTGGGGACACTGTG...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGTCTGGAATGCATCTCTaGCAGCAGCAACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLESGMHL*QQQHCS
Trigger: AGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGA...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGAACCAACAGCTTACATaGGAATACTGCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLNQQLT*EYCCPC
Trigger: GCAGGGGCAGCAGTATTCCCATGTAAGCTGTTGGTT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTCTTGCTGACTGTCTTTaGAGTGGGCTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFLADCL*SGLGNA
Trigger: GGCATTCCCCAGCCCACTCCAAAGACAGTCAGCAAG...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACCCCCATGTGTCTCTCTaGGGTAACATGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHPHVSL*GNMRLD
Trigger: GTCAAGCCTCATGTTACCCCAGAGAGACACATGGGG...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGCCCCATGTGTCTCTCTaGGGTAACATGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGPHVSL*GNMRLD
Trigger: GTCAAGCCTCATGTTACCCCAGAGAGACACATGGGG...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGTGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPECRFSL*CVITKA
Trigger: AGCTTTTGTGATCACACACCACAGGGAGAATCTGCA...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGCTATTCAATATACTCTaGGGCTTACTGCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELFNIL*GLLRGD
Trigger: GTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAG...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGAGTGAGGTAGTGACTTaGGGTAGCAAGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLSEVVT*GSKTVL
Trigger: GAGGACAGTCTTGCTACCCCAAGTCACTACCTCACT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTCACATACAGAGTACATaGGGGAGTCAAGACATTTCC +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGHIQST*GSQDIS
Trigger: GGAAATGTCTTGACTCCCCCATGTACTCTGTATGTG...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTAGGGATTGGAGAAGGTaGACCGTGAGGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFRDWRR*TVRLGF
Trigger: GAAACCCAGCCTCACGGTCCACCTTCTCCAATCCCT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR CCA 90 bp CTGAAAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCGTAGATTTCTGGCTTTaGTTCTGCTGTAATCCCAAC +
Preference number: 4 (lower is better)
Translates to: LKRSSGQSSTVSPHADSPVDFWL*FCCNPN
Trigger: GTTGGGATTACAGCAGAACCAAAGCCAGAAATCTAC...GGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATATCTCTTCCCAGTATTaGTCTCCCAGTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDISSQY*SPSAEG
Trigger: TCCTTCAGCACTGGGAGATCAATACTGGGAAGAGAT...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCTTTGGTTCTGCCAATaGGAGAAGATTCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVLWFCQ*EKIPVI
Trigger: AATTACAGGAATCTTCTCTCATTGGCAGAACCAAAG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGAAGTACATGTTGACTaGGGAACTGCTGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDEVHVD*GTADRR
Trigger: TCTCCTGTCAGCAGTTCCTCAGTCAACATGTACTTC...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTCATACTCTCTACAGTTaGTTGCTCCAAATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGHTLYS*LLQISR
Trigger: CCTTGAGATTTGGAGCAATCAACTGTAGAGAGTATG...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATGTTTGTAATAAAGTTTaGTTCCAGGTTATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNVCNKV*FQVMVR
Trigger: CCGGACCATAACCTGGAATCAAACTTTATTACAAAC...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAGTGTTTTCTGAGGGTTaGCTTATCACAAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPEVFSEG*LITKAS
Trigger: CGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACAC...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGTCCTCTGGTGTTTTCTaGGGGTTGACTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGSSGVF*GLTYHK
Trigger: TTTGTGATAAGTCAACCCTCAGAAAACACCAGAGGA...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGATGTCTGGTAAATGTTaGTTATTGCTAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLMSGKC*LLLKPS
Trigger: GGAAGGCTTTAGCAATAATCAACATTTACCAGACAT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCAGAGGTCTTCTCCCTaGGTGTGTCCTCCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPQRSSP*VCPPLV
Trigger: TACTAAAGGAGGACACACTCAGGGAGAAGACCTCTG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCGAAACTCCATCCAATaGGAGAAGATTCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVRNSIQ*EKIPVI
Trigger: AATTACAGGAATCTTCTCTCATTGGATGGAGTTTCG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR GCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGAGTCAGCCCAGTGTGTaGCTTGAAATTCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGSQPSV*LEILPE
Trigger: CTCTGGCAGAATTTCAAGGCACACACTGGGCTGACT...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR GCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAAAGCCTTTGTCTAGCTaGACAGGGTTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEKPLSS*TGFGLW
Trigger: CCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTT...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAACTGATGGCTACAGTTaGCCGTACTCTATACTCATA +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPETDGYS*PYSILI
Trigger: TATGAGTATAGAGTACGGGCAACTGTAGCCATCAGT...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGTGTCCTTTTGTGCATaGTCAAGGCTGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPVSFCA*SRLTDG
Trigger: GCCATCAGTCAGCCTTGAGCATGCACAAAAGGACAC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTAGTGCATCTCTGGAATaGATCTCTGCCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPSASLE*ISASSN
Trigger: GTTGCTGCTGGCAGAGATGCATTCCAGAGATGCACT...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGCCATTTCTAAGCATTaGATAATTCCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVAISKH*IIPPFL
Trigger: AAGAAATGGTGGAATTATGCAATGCTTAGAAATGGC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR CCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTATCCCTGAATGTAACTaGTACCACTATTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGIPECN*YHYLGL
Trigger: AAGGCCCAAATAGTGGTACCAGTTACATTCAGGGAT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGCTGTTTCCAATGCCCTaGGCTAGAATTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGLFPMP*ARIPWM
Trigger: CATCCAGGGAATTCTAGCCCAGGGCATTGGAAACAG...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTGTCTTTGGGCTGAGCTaGGCTCTGTTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFVFGLS*ALFLPP
Trigger: TGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGAC...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTACAGGGTTTGGTCTTTaGGCTGAGCTGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFTGFGL*AELGSV
Trigger: AACAGAGCCCAGCTCAGCCCAAAGACCAAACCCTGT...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATTTTGATTCCAGGTTATaGTCCGGTTCATACTCTCTA +
Preference number: 4 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNFDSRL*SGSYSL
Trigger: TAGAGAGTATGAACCGGACCATAACCTGGAATCAAA...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAATCGAGTGTATACGATaGTGTCTGATGAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPEIECIR*CLMRVD
Trigger: ATCAACCCTCATCAGACACCATCGTATACACTCGAT...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGTGCAGATTCTCCCTGTaGTGTGTGATCACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLECRFSL*CVITKA
Trigger: AGCTTTTGTGATCACACACCACAGGGAGAATCTGCA...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGATCCTTCAGTTCGATaGGGATCTCTGGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLDPSVR*GSLDLE
Trigger: TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAACTATTCAATATACTCTaGGGCTTACTGCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLELFNIL*GLLRGD
Trigger: GTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAG...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACAGTGAGGTAGTGACTTaGGGTAGCAAGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHSEVVT*GSKTVL
Trigger: GAGGACAGTCTTGCTACCCCAAGTCACTACCTCACT...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGAGTGAGGTAGTGACTTaGGGTAGCAAGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGSEVVT*GSKTVL
Trigger: GAGGACAGTCTTGCTACCCCAAGTCACTACCTCACT...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAAGTTGAAAACAGGTTCTaGCTCCCGAGTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLEVENRF*LPSEVS
Trigger: AGAGACTTCACTCGGGAGCCAGAACCTGTTTTCAAC...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617391.4
3UTR CAA 72 bp AGAATCAATTATCTGGACAGACAACGAGACAGAAAATaGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RINYLDRQRDRK*RIHWGVRAGLG
Trigger: GCCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTGTCCAGATAATTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGAAGCCTTTCGCTTTATaGTTTTGGGTCAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVKPFAL*FWVNFF
Trigger: GAAGAAATTGACCCAAAATCATAAAGCGAAAGGCTT...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTGAAGTACATGTTGACTaGGGAACTGCTGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPEVHVD*GTADRR
Trigger: TCTCCTGTCAGCAGTTCCTCAGTCAACATGTACTTC...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGTTCCCTGGATGGAAGTaGTTTTCTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGFPGWK*FSAHKP
Trigger: GGGCTTATGTGCAGAAAATCACTTCCATCCAGGGAA...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGGTTTGTAATAAAGTTTaGTTCCAGGTTATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGVCNKV*FQVMVR
Trigger: CCGGACCATAACCTGGAATCAAACTTTATTACAAAC...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGATGCCTGATAAGGGCTaGCACATCTCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGMPDKG*HISGTS
Trigger: TGAAGTTCCAGAGATGTGTCAGCCCTTATCAGGCAT...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATAGTCAAGACATTTCCTaGAAATCCCTCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: EEEADLQCVCNPVILQFDSQDIS*KSLRGE
Trigger: CTCACCTCTGAGGGATTTTCAGGAAATGTCTTGACT...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGGAAAATGAATGTGAGTaGAAGCGACGATGCCATTTC +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVENECE*KRRCHF
Trigger: GAAATGGCATCGTCGCTTTCACTCACATTCATTTTC...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR GCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGCTTACATGGGAATACTaGTGCCCCTGCTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGLTWEY*CPCCFQ
Trigger: TTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAG...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCACAGTGTCCCCACATaGAGATTCTCCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSHSVPT*RFSLWC
Trigger: ACACCACAGGGAGAATCTGCATGTGGGGACACTGTG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGTTTGATTCCAGGTTATaGTCCGGTTCATACTCTCTA +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEFDSRL*SGSYSL
Trigger: TAGAGAGTATGAACCGGACCATAACCTGGAATCAAA...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGAACATGAGGCTTGACTaGTCACTCAGGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLNMRLD*SLRSCS
Trigger: TGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGGGGCTGACACATCTCTaGAACTTCACTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGGLTHL*NFTHNL
Trigger: CAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCC...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCCTGAAAAGGTCATCTaGGCAGAGCTCCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSPEKVI*AELHSV
Trigger: GACACTGTGGAGCTCTGCCCAGATGACCTTTTCAGG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCTGCGGGGTGACTCATaGCTGAAGCCTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSLRGDS*LKPYLH
Trigger: GTGTAGATAAGGCTTCAGCCATGAGTCACCCCGCAG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCTGCAGCCAGGACCTTaGAAAATGAATGTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLQPGP*KMNVSE
Trigger: TTCACTCACATTCATTTTCCAAGGTCCTGGCTGCAG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR TCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGTGTTTTCTGAGGGTTaGCTTATCACAAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLVFSEG*LITKAS
Trigger: CGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACAC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCAAGTCAGTTGAGGAGTaGCATCGGGATGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSKSVEE*HRDEAP
Trigger: TGGAGCTTCATCCCGATGTCACTCCTCAACTGACTT...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATTAAAATACCCATGTTaGAAACAGGTTCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLELKYPC*KQVLAP
Trigger: GGGAGCCAGAACCTGTTTTCAACATGGGTATTTTAA...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR GCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTTCTGGAATGCATCTCTaGCAGCAGCAACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFSGMHL*QQQHCS
Trigger: AGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGA...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTTCTGAATGTGTTCTCTaGTGTCTGCTGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFSECVL*CLLRLD
Trigger: GTCCAACCTCAGCAGACACCAGAGAACACATTCAGA...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACAACATGAGGCTTGACTaGTCACTCAGGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHNMRLD*SLRSCS
Trigger: TGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGATCCCTGAATGTAACTaGTACCTGATAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVIPECN*YLIGSS
Trigger: AGAACTTCCTATCAGGTACCAGTTACATTCAGGGAT...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR CCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCTACTCGAGAGGCTGTaGCAGGAGAATTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSLLERL*QENCLN
Trigger: GTTCAAGCAATTCTCCTGCCACAGCCTCTCGAGTAG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR CCA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGACAAGTGTAGATTTCTaGCTTTGGTTCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPETSVDF*LWFCCN
Trigger: ATTACAGCAGAACCAAAGCCAGAAATCTACACTTGT...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCCATTTCTTTTGTTCTaGGAACAGCATGTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPPFLLF*EQHVRR
Trigger: TCTTCGGACATGCTGTTCTCAGAACAAAAGAAATGG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS-3UTR GCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCTCTCTACAGTTGATTaGTCCAAATCTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLSTVD*SKSQGF
Trigger: GAAACCTTGAGATTTGGAGCAATCAACTGTAGAGAG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAACTCTCTACAGTTGATTaGTCCAAATCTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: MCLQPSDPSVRWGSLDLELSTVD*SKSQGF
Trigger: GAAACCTTGAGATTTGGAGCAATCAACTGTAGAGAG...TTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGGGTTGCAGACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACACTGATGGCTACAGTTaGCCGTACTCTATACTCATA +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHTDGYS*PYSILI
Trigger: TATGAGTATAGAGTACGGGCAACTGTAGCCATCAGT...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTCTGGAATGCATCTCTaGCAGCAGCAACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSSGMHL*QQQHCS
Trigger: AGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGA...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAATTATTTAACAGTTACTaGCATCTTCGCTCACATACA +
Preference number: 4 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELFNSY*HLRSHT
Trigger: TGTATGTGAGCGAAGATGGCAGTAACTGTTAAATAA...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTTTATTTAACAGTTACTaGCATCTTCGCTCACATACA +
Preference number: 4 (lower is better)
Translates to: SLECISASSNTVLSSSWGLFNSY*HLRSHT
Trigger: TGTATGTGAGCGAAGATGGCAGTAACTGTTAAATAA...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGATCCCTGAATGTAACTaGTACCACTATTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LIRADTSLELHSQSVYTGIPECN*YHYLGL
Trigger: AAGGCCCAAATAGTGGTACCAGTTACATTCAGGGAT...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTGTGTCTGATGAGGGTTaGTCTATCTTTAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFVSDEG*SIFKAS
Trigger: CGAAGCTTTAAAGATAGATCAACCCTCATCAGACAC...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp ACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACCTCTCTACAGTTGATTaGTCCAAATCTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TKALPIHPTNKDLLPEGHLSTVD*SKSQGF
Trigger: GAAACCTTGAGATTTGGAGCAATCAACTGTAGAGAG...GTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR GCA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGTTATTTAACAGTTACTaGCATCTTCGCTCACATACA +
Preference number: 4 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVLFNSY*HLRSHT
Trigger: TGTATGTGAGCGAAGATGGCAGTAACTGTTAAATAA...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGTTAGAATCAATTATCTaGACAGACAACGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PVILQFDGDLWIWNDLLELESII*TDNETE
Trigger: TTCTGTCTCGTTGTCTGTCCAGATAATTGATTCTAA...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTAAGCCTTTCGCTTTATaGTTTTGGGTCAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPKPFAL*FWVNFF
Trigger: GAAGAAATTGACCCAAAATCATAAAGCGAAAGGCTT...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR TCA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTCCTCTGGTGTTTTCTaGGGGTTGACTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSSSGVF*GLTYHK
Trigger: TTTGTGATAAGTCAACCCTCAGAAAACACCAGAGGA...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR TCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTATGTCTGGTAAATGTTaGTTATTGCTAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPMSGKC*LLLKPS
Trigger: GGAAGGCTTTAGCAATAATCAACATTTACCAGACAT...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTTTTGATTCCAGGTTATaGTCCGGTTCATACTCTCTA +
Preference number: 4 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFFDSRL*SGSYSL
Trigger: TAGAGAGTATGAACCGGACCATAACCTGGAATCAAA...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTTAGAATCAATTATCTaGACAGACAACGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLESII*TDNETE
Trigger: TTCTGTCTCGTTGTCTGTCCAGATAATTGATTCTAA...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CCA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTTTAGAATCAATTATCTaGACAGACAACGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPLESII*TDNETE
Trigger: TTCTGTCTCGTTGTCTGTCCAGATAATTGATTCTAA...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS CCA 90 bp ATCCTCGCAGGCTTCGGCTCCCATTGGCCGCCACAGAGCCACTTCTaGGCCGTGCAACGGTTACTTTTCCAGGACAGTGACCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: ILAGFGSHWPPQSHF*AVQRLLFQDSDHCS
Trigger: ACTGCAGTGGTCACTGTCCTGGAAAAGTAACCGTTGCACGGCCCAGAAGTGGCTCTGTGGCGGCCAATGGGAGCCGAAGCCTGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR CAA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCTTGCAGACCAGGGTTaGGAGCCACCTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: APLLNVSLPCLIRADTSLLADQG*EPPPLS
Trigger: GGAGAGAGGAGGTGGCTCCAAACCCTGGTCTGCAAG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATAGGCTTCGGCTCCCATaGGCCGCCACAGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNRLRLP*AATEPL
Trigger: AAGTGGCTCTGTGGCGGCCAATGGGAGCCGAAGCCT...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR CAA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGGGCTGGGGAATGCCCTaGAGGTTTCTCTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLGWGMP*RFLSPL
Trigger: CAGAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCC...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACCCCTGCAAAGGTGCATaGCCCCTGTGGTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: THKAPLLNVSLPCLIRADPCKGA*PLWCMQ
Trigger: CTGCATGCACCACAGGGGCAATGCACCTTTGCAGGG...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCCCTGCAAAGGTGCATaGCCCCTGTGGTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVPCKGA*PLWCMQ
Trigger: CTGCATGCACCACAGGGGCAATGCACCTTTGCAGGG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATCCCTGCAAAGGTGCATaGCCCCTGTGGTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNPCKGA*PLWCMQ
Trigger: CTGCATGCACCACAGGGGCAATGCACCTTTGCAGGG...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATGCAGCTCCCTGTGGCTGAGAGTGAGTTCCAGAGCGGAGTGCATCTCTGGAATGGCTGGGGAATGCCCTaGAGGTTTCTCTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: MQLPVAESEFQSGVHLWNGWGMP*RFLSPL
Trigger: CAGAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCC...ATTCCAGAGATGCACTCCGCTCTGGAACTCACTCTCAGCCACAGGGAGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp GCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCTTGCAGACCAGGGTTaGGAGCCACCTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: ALPIHPTNKDLLPEGHSVLADQG*EPPPLS
Trigger: GGAGAGAGGAGGTGGCTCCAAACCCTGGTCTGCAAG...CACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGGCTGGGGAATGCCCTaGAGGTTTCTCTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SLECISASSNTVLSSSWGGWGMP*RFLSPL
Trigger: CAGAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCC...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCTAGCTGCACAGGGTTaGGTCTTTGGGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGLAAQG*VFGLSW
Trigger: CCAGCTCAGCCCAAAGACCAAACCCTGTGCAGCTAG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp GCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACACATCTCTGCTGGTCACTCAGGTCTaGTTCATGACCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: APLLNVSLPCLIRADTSLLVTQV*FMTPAY
Trigger: GTATGCAGGGGTCATGAACAAGACCTGAGTGACCAG...CAGAGATGTGTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGCTTGCAGACCAGGGTTaGGAGCCACCTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: KLCPYILQTKTSFLRATLLADQG*EPPPLS
Trigger: GGAGAGAGGAGGTGGCTCCAAACCCTGGTCTGCAAG...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGGTCCTCCTAAGTCAGTaGAGGAGTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVVLLSQ*RSDIGM
Trigger: CATCCCGATGTCACTCCTCAACTGACTTAGGAGGAC...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CCAGTGATCCTTCAGTTCGATGGGGATCTCTGGATCTGGAATGACCTTCTGGAGAGCCCAGTGTGTGCCTaGAAATTCTGCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PVILQFDGDLWIWNDLLESPVCA*KFCQRS
Trigger: GGACCTCTGGCAGAATTTCAAGGCACACACTGGGCT...CTCCAGAAGGTCATTCCAGATCCAGAGATCCCCATCGAACTGAAGGATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CAA 90 bp TTGAGGAGTGACATCGGGATGAAGCTCCACCCACAAGCCCTGCCCACAGAGGTCGATCTGAAGTACATGTaGACTGAGGAACTGCTGACA +
Preference number: 5 (lower is better)
Translates to: LRSDIGMKLHPQALPTEVDLKYM*TEELLT
Trigger: TGTCAGCAGTTCCTCAGTCAACATGTACTTCAGATC...GACCTCTGTGGGCAGGGCTTGTGGGTGGAGCTTCATCCCGATGTCACTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTGGTCACTCAGGTCTaGTTCATGACCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: ISASSNTVLSSSWGVTPELVTQV*FMTPAY
Trigger: GTATGCAGGGGTCATGAACAAGACCTGAGTGACCAG...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAGTCCTCCTAAGTCAGTaGAGGAGTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: ISASSNTVLSSSWGVTPEVLLSQ*RSDIGM
Trigger: CATCCCGATGTCACTCCTCAACTGACTTAGGAGGAC...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS CCA 90 bp CTTCCCAGTATTGATCTCCCAGTGCTGAAGGATAAGGCAACATCATaGCGCCAGAGTCAGCCCAGTGTGTGCCTTGAAATTCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LPSIDLPVLKDKATS*RQSQPSVCLEILPE
Trigger: CTCTGGCAGAATTTCAAGGCACACACTGGGCTGACTCTGGCGCCATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAATACTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278772.9
ENST00000358413.6
ENST00000381253.5
ENST00000421216.1
ENST00000445484.5
ENST00000612935.4
ENST00000674000.1
CDS-3UTR CAA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATAGCCCAGTGTGTGCCTaGAAATTCTGCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: EEEADLQCVCNPVILQFDSPVCA*KFCQRS
Trigger: GGACCTCTGGCAGAATTTCAAGGCACACACTGGGCT...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CAA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAACTGGTACCACTATTaGGGCCTTTCCCTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLNWYHY*GLSLLF
Trigger: AAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGTT...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CAA 90 bp GCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGGATCTGAAGTACATGTaGACTGAGGAACTGCTGACA +
Preference number: 5 (lower is better)
Translates to: ASLPAATLFSQAAGVLPLDLKYM*TEELLT
Trigger: TGTCAGCAGTTCCTCAGTCAACATGTACTTCAGATC...CAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTCTAGCTGCACAGGGTTaGGTCTTTGGGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPLAAQG*VFGLSW
Trigger: CCAGCTCAGCCCAAAGACCAAACCCTGTGCAGCTAG...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp AAAGGTCATCTGGGCAGAGCTCCACAGTGTCCCCACATGCAGATTCTCCCTGTGCAACGAGACAGAAAATaGAGGATTCACTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KGHLGRAPQCPHMQILPVQRDRK*RIHWGV
Trigger: CACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTG...CACAGGGAGAATCTGCATGTGGGGACACTGTGGAGCTCTGCCCAGATGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACCAACGAGACAGAAAATaGAGGATTCACTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: THKAPLLNVSLPCLIRADQRDRK*RIHWGV
Trigger: CACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTG...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACAATTCCTTCAAGCCTTaGTCTAGCTGCACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: THKAPLLNVSLPCLIRADNSFKP*SSCTGF
Trigger: AAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATT...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGCAACGAGACAGAAAATaGAGGATTCACTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGQRDRK*RIHWGV
Trigger: CACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTG...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ACTCATAAGGCTCCTCTCCTGAACGTGTCCCTCCCATGCCTGATAAGGGCTGACCTTTTTCCTAAGTCCTaGTCCATTCTCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: THKAPLLNVSLPCLIRADLFPKS*SILPTH
Trigger: ATGTGTGGGGAGAATGGACAAGGACTTAGGAAAAAG...GTCAGCCCTTATCAGGCATGGGAGGGACACGTTCAGGAGAGGAGCCTTATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp AAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGGTCCTCCTAAGTCAGTaGAGGAGTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: KLCPYILQTKTSFLRATLVLLSQ*RSDIGM
Trigger: CATCCCGATGTCACTCCTCAACTGACTTAGGAGGAC...CAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGGATCTGAAGTACATGTaGACTGAGGAACTGCTGACA +
Preference number: 5 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPEDLKYM*TEELLT
Trigger: TGTCAGCAGTTCCTCAGTCAACATGTACTTCAGATC...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCCTAGCTGCACAGGGTTaGGTCTTTGGGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSLAAQG*VFGLSW
Trigger: CCAGCTCAGCCCAAAGACCAAACCCTGTGCAGCTAG...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp TCTCTGGAATGCATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTAATTCCTTCAAGCCTTaGTCTAGCTGCACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: SLECISASSNTVLSSSWGNSFKP*SSCTGF
Trigger: AAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATT...ACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGATGCATTCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp ATCTCTGCCAGCAGCAACACTGTTCTCTCAAGCAGCTGGGGTGTTACCCCTGAAAATTCCTTCAAGCCTTaGTCTAGCTGCACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: ISASSNTVLSSSWGVTPENSFKP*SSCTGF
Trigger: AAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATT...TTCAGGGGTAACACCCCAGCTGCTTGAGAGAACAGTGTTGCTGCTGGCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS GCA 90 bp CTGAAGGATAAGGCAACATCATGGCGCCAGAGTCAGCCCAGTGTGTaGCTTGAAATTCTGCCAGAGGTCCAGGTAGATGTTATTTCATCT +
Preference number: 5 (lower is better)
Translates to: LKDKATSWRQSQPSV*LEILPEVQVDVISS
Trigger: AGATGAAATAACATCTACCTGGACCTCTGGCAGAATTTCAAGGCACACACTGGGCTGACTCTGGCGCCATGATGTTGCCTTATCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278772.9
ENST00000358413.6
ENST00000381253.5
ENST00000421216.1
ENST00000445484.5
ENST00000612935.4
ENST00000674000.1
CDS CCA 90 bp TCTAATTCCTTCAAGCCTTTGTCTAGCTGCACAGGGTTTGGTCTTTaGGCTGAGCTGGGCTCTGTTTCTACCACCATGTTGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: SNSFKPLSSCTGFGL*AELGSVSTTMLPFL
Trigger: TAGAAAAGGCAACATGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CAGACAACGAGACAGAAAATTGAGGATTCACTGGGGAGTGAGGGCAGGACTGGGTCATACTCTCTACAGTaGATTGCTCCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: QTTRQKIEDSLGSEGRTGSYSLQ*IAPNLK
Trigger: CTTGAGATTTGGAGCAATCAACTGTAGAGAGTATGA...CCCAGTCCTGCCCTCACTCCCCAGTGAATCCTCAATTTTCTGTCTCGTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CCCATACATCCTACAAACAAAGACCTCCTTCCTGAGGGCCACTCTGTGCCTGAGTCATACTCTCTACAGTaGATTGCTCCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: PIHPTNKDLLPEGHSVPESYSLQ*IAPNLK
Trigger: CTTGAGATTTGGAGCAATCAACTGTAGAGAGTATGA...CTCAGGCACAGAGTGGCCCTCAGGAAGGAGGTCTTTGTTTGTAGGATGTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGAACTGGTACCACTATTaGGGCCTTTCCCTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LIRADTSLELHSQSVYTGNWYHY*GLSLLF
Trigger: AAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGTT...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000612935.4
CDS-3UTR CAA 90 bp CTGATAAGGGCTGACACATCTCTGGAACTTCACTCACAATCTGTGTACACAGGGCTTTTTCCTAAGTCCTaGTCCATTCTCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: LIRADTSLELHSQSVYTGLFPKS*SILPTH
Trigger: ATGTGTGGGGAGAATGGACAAGGACTTAGGAAAAAG...CCCTGTGTACACAGATTGTGAGTGAAGTTCCAGAGATGTGTCAGCCCTTATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp GAGGAAGAAGCTGACCTGCAATGTGTCTGCAACCCAGTGATCCTTCAGTTCGATCTTAAAATACCCATGTaGAAAACAGGTTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: EEEADLQCVCNPVILQFDLKIPM*KTGSGS
Trigger: GGAGCCAGAACCTGTTTTCAACATGGGTATTTTAAG...ATCGAACTGAAGGATCACTGGGTTGCAGACACATTGCAGGTCAGCTTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS-3UTR CAA 90 bp CAGTTACTGCCATCTTCGCTCACATACAGAGTACATGGGGGAGTCAAGACATTTCTTTTTCCTAAGTCCTaGTCCATTCTCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: QLLPSSLTYRVHGGVKTFLFPKS*SILPTH
Trigger: ATGTGTGGGGAGAATGGACAAGGACTTAGGAAAAAG...AAATGTCTTGACTCCCCCATGTACTCTGTATGTGAGCGAAGATGGCAGTAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp TTTCTATTCAATATACTCTGGGGCTTACTGCGGGGTGACTCATGGCTGAAGCCTTCATACTCTCTACAGTaGATTGCTCCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: FLFNILWGLLRGDSWLKPSYSLQ*IAPNLK
Trigger: CTTGAGATTTGGAGCAATCAACTGTAGAGAGTATGA...AGGCTTCAGCCATGAGTCACCCCGCAGTAAGCCCCAGAGTATATTGAATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278772.9
ENST00000612935.4
ENST00000617391.4
CDS CCA 90 bp CCTAAGAGGGTCCTCGGGTTTGTAATAAAGTTTGATTCCAGGTTATaGTCCGGTTCATACTCTCTACAGTTGATTGCTCCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: PKRVLGFVIKFDSRL*SGSYSLQLIAPNLK
Trigger: CTTGAGATTTGGAGCAATCAACTGTAGAGAGTATGAACCGGACCATAACCTGGAATCAAACTTTATTACAAACCCGAGGACCCTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS-3UTR CAA 90 bp GTGTGTGATCACAAAAGCTTTGCCCATACATCCTACAAACAAAGACCTCCTTCCTGTAGATTTCTGGCTTaGGTTCTGCCAATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VCDHKSFAHTSYKQRPPSCRFLA*VLPMRE
Trigger: TTCTCTCATTGGCAGAACCAAAGCCAGAAATCTACA...GGAAGGAGGTCTTTGTTTGTAGGATGTATGGGCAAAGCTTTTGTGATCACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278772.9
ENST00000617391.4
CDS TCA 90 bp GATGCCATTTCTAAGCATTGCATAATTCCACCATTTCTTTTGTTCTaGGAACAGCATGTCCGAAGAGGGACTGTGGTTCTACTGATAGGA +
Preference number: 5 (lower is better)
Translates to: DAISKHCIIPPFLLF*EQHVRRGTVVLLIG
Trigger: TCCTATCAGTAGAACCACAGTCCCTCTTCGGACATGCTGTTCTCAGAACAAAAGAAATGGTGGAATTATGCAATGCTTAGAAATGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358413.6
ENST00000445484.5
ENST00000612935.4
CDS TCA 90 bp GATATGCAAGTTGATGTAATTCGTCAGAATATATGGTTCTCCATATaGAGTTCTTCTGAGCACTACTGTCTGCCTGGCTTTCTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: DMQVDVIRQNIWFSI*SSSEHYCLPGFLLK
Trigger: TTTTAACAGAAAGCCAGGCAGACAGTAGTGCTCAGAAGAACTTCATATGGAGAACCATATATTCTGACGAATTACATCAACTTGCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465019.1
CDS CCA 72 bp TTCCCGACCCTCCTTTCCCCACGAGAGAGGGCATCCTaGGGCCAAGGAGCCGCGGAGGCCGCGCTCACCAGA +
Preference number: 6 (lower is better)
Translates to: FPTLLSPRERAS*GQGAAEAALTR
Trigger: TCTGGTGAGCGCGGCCTCCGCGGCTCCTTGGCCCCAGGATGCCCTCTCTCGTGGGGAAAGGAGGGTCGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421216.1
CDS CCA 72 bp GAATCGCAGGTTTTGCCGCAATGGCAAGTCCCAACTTaGCCAACAGGGGGCGCCCGCCCGAACCGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: ESQVLPQWQVPT*PTGGARPNRQD
Trigger: GTCCTGGCGGTTCGGGCGGGCGCCCCCTGTTGGCCAAGTTGGGACTTGCCATTGCGGCAAAACCTGCGATTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445484.5
CDS CAA 72 bp CGAATCGCAGGTTTTGCCGCAATGGCAAGTCCCAACTaGGCCAACAGGGGGCGCCCGCCCGAACCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: RIAGFAAMASPN*ANRGRPPEPPG
Trigger: TCCTGGCGGTTCGGGCGGGCGCCCCCTGTTGGCCAAGTTGGGACTTGCCATTGCGGCAAAACCTGCGATTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445484.5
CDS CCA 72 bp TTCTCAAGAGATCGTCCTCTCCCAGCAGGCAGGGATTaGAGAAGGTGGACCAGAGCCAGCGTGCCCGGGATC +
Preference number: 6 (lower is better)
Translates to: FSRDRPLPAGRD*RRWTRASVPGI
Trigger: GATCCCGGGCACGCTGGCTCTGGTCCACCTTCTCCAATCCCTGCCTGCTGGGAGAGGACGATCTCTTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000381253.5
ENST00000617391.4
ENST00000674000.1
CDS CCA 72 bp GGCTTCGGCTCCCATTGGCCGCCACAGAGCCACTTCTaGGCCGTGCAACGGTTACTTTTCCAGGACAGTGAC +
Preference number: 6 (lower is better)
Translates to: GFGSHWPPQSHF*AVQRLLFQDSD
Trigger: GTCACTGTCCTGGAAAAGTAACCGTTGCACGGCCCAGAAGTGGCTCTGTGGCGGCCAATGGGAGCCGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS CCA 72 bp TTCTCAAGAGATCGTCCTCTCCCAGCAGGCAGGGATTaGAGAAGGTGGACCTACGCTCGGCCTTTCCCGACC +
Preference number: 6 (lower is better)
Translates to: FSRDRPLPAGRD*RRWTYARPFPT
Trigger: GGTCGGGAAAGGCCGAGCGTAGGTCCACCTTCTCCAATCCCTGCCTGCTGGGAGAGGACGATCTCTTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421216.1
CDS CCA 72 bp TTCTCAAGAGATCGTCCTCTCCCAGCAGGCAGGGATTaGAGAAGGTGGACCGTGAGGCTGGGTTTCGCGTTC +
Preference number: 6 (lower is better)
Translates to: FSRDRPLPAGRD*RRWTVRLGFAF
Trigger: GAACGCGAAACCCAGCCTCACGGTCCACCTTCTCCAATCCCTGCCTGCTGGGAGAGGACGATCTCTTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358413.6
ENST00000445484.5
ENST00000612935.4
CDS TCA 72 bp CCCAACTACTCGAGAGGCTGTGGCAGGAGAATTGCTTaGACCCGGGAGGCAAAGGTTGTGGTGAGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: PNYSRGCGRRIA*TREAKVVVSRD
Trigger: ATCTCGGCTCACCACAACCTTTGCCTCCCGGGTTCAAGCAATTCTCCTGCCACAGCCTCTCGAGTAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS CAA 72 bp TTGCTGACTGTCTTTGGAGTGGGCTGGGGAATGCCCTaGAGGTTTCTCTCTCCTCTGTCCTTGCAGACCAGG +
Preference number: 6 (lower is better)
Translates to: LLTVFGVGWGMP*RFLSPLSLQTR
Trigger: CCTGGTCTGCAAGGACAGAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGACAGTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS GCA 72 bp AAGGCAACATCATGGCGCCAGAGTCAGCCCAGTGTGTaGCTTGAAATTCTGCCAGAGGTCCAGGTAGATGTT +
Preference number: 6 (lower is better)
Translates to: KATSWRQSQPSV*LEILPEVQVDV
Trigger: AACATCTACCTGGACCTCTGGCAGAATTTCAAGGCACACACTGGGCTGACTCTGGCGCCATGATGTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278772.9
ENST00000358413.6
ENST00000381253.5
ENST00000421216.1
ENST00000445484.5
ENST00000612935.4
ENST00000674000.1
CDS TCA 72 bp AACATGAGGCTTGACTGGTCACTCAGGTCTTGTTCATaGCCCCTGCATACACAGGTTTCTCCCGTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: NMRLDWSLRSCS*PLHTQVSPVSV
Trigger: CACACTGACGGGAGAAACCTGTGTATGCAGGGGTCATGAACAAGACCTGAGTGACCAGTCAAGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS GCA 72 bp TCAAACCAACAGCTTACATGGGAATACTGCTGCCCCTaGTGTTTCCAATGCCCTGGGCTAGAATTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: SNQQLTWEYCCP*CFQCPGLEFPG
Trigger: TCCAGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAGCTGTTGGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS GCA 72 bp GCAGGAGGAACAAGTGTAGATTTCTGGCTTTGGTTCTaGTGTAATCCCAACTACTCGAGAGGCTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: AGGTSVDFWLWF*CNPNYSRGCGR
Trigger: CCTGCCACAGCCTCTCGAGTAGTTGGGATTACAGCAGAACCAAAGCCAGAAATCTACACTTGTTCCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612935.4
CDS CCA 72 bp ATGGGAATACTGCTGCCCCTGCTGTTTCCAATGCCCTaGGCTAGAATTCCCTGGATGGAAGTGATTTTCTGC +
Preference number: 6 (lower is better)
Translates to: MGILLPLLFPMP*ARIPWMEVIFC
Trigger: GCAGAAAATCACTTCCATCCAGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGGGCAGCAGTATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS TCA 72 bp AAGCAAAATCTCTTCCCAGTATTGATCTCCCAGTGCTaGAGGATAAGGCAACATCATGGCGCCAGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: KQNLFPVLISQC*RIRQHHGARVS
Trigger: GCTGACTCTGGCGCCATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAATACTGGGAAGAGATTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278772.9
ENST00000358413.6
ENST00000381253.5
ENST00000421216.1
ENST00000445484.5
ENST00000612935.4
ENST00000674000.1
CDS CAA 72 bp GTGACAGCCTCTCCGTCTCTTCTTAAAATACCCATGTaGAAAACAGGTTCTGGCTCCCGAGTGAAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: VTASPSLLKIPM*KTGSGSRVKSL
Trigger: CAGAGACTTCACTCGGGAGCCAGAACCTGTTTTCAACATGGGTATTTTAAGAAGAGACGGAGAGGCTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617391.4
CDS CAA 90 bp CAGTTGATTGCTCCAAATCTCAAGGTTTCTAATTCCTTCAAGCCTTaGTCTAGCTGCACAGGGTTTGGTCTTTGGGCTGAGCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: QLIAPNLKVSNSFKP*SSCTGFGLWAELGS
Trigger: AGAGCCCAGCTCAGCCCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATTAGAAACCTTGAGATTTGGAGCAATCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS CAA 72 bp GCTCCAAATCTCAAGGTTTCTAATTCCTTCAAGCCTTaGTCTAGCTGCACAGGGTTTGGTCTTTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: APNLKVSNSFKP*SSCTGFGLWAE
Trigger: CTCAGCCCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATTAGAAACCTTGAGATTTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS TCA 72 bp ACAGCTGGTGACCCTGGAGAGCCTGGATATGCAAGTTaGTGTAATTCGTCAGAATATATGGTTCTCCATATG +
Preference number: 6 (lower is better)
Translates to: TAGDPGEPGYAS*CNSSEYMVLHM
Trigger: CATATGGAGAACCATATATTCTGACGAATTACATCAACTTGCATATCCAGGCTCTCCAGGGTCACCAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465019.1
CDS TCA 72 bp TCGTCAGAATATATGGTTCTCCATATGAAGTTCTTCTaGGCACTACTGTCTGCCTGGCTTTCTGTTAAAACC +
Preference number: 6 (lower is better)
Translates to: SSEYMVLHMKFF*ALLSAWLSVKT
Trigger: GGTTTTAACAGAAAGCCAGGCAGACAGTAGTGCTCAGAAGAACTTCATATGGAGAACCATATATTCTGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465019.1
CDS TCA 72 bp TTATTTCATCTCAAGATGGAGTTCTGCTGCCTGTGGTaGCTTCTTCCAACCTTAATTATAAAAAGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LFHLKMEFCCLW*LLPTLIIKSPA
Trigger: AGCTGGGCTTTTTATAATTAAGGTTGGAAGAAGTCACCACAGGCAGCAGAACTCCATCTTGAGATGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278772.9
ENST00000358413.6
ENST00000381253.5
ENST00000421216.1
ENST00000445484.5
ENST00000612935.4
ENST00000674000.1
CDS TCA 72 bp ATTCCAGGTTATGGTCCGGTTCATACTCTCTACAGTTaGTTGCTCCAAATCTCAAGGTTTCTAATTCCTTCA +
Preference number: 6 (lower is better)
Translates to: IPGYGPVHTLYS*LLQISRFLIPS
Trigger: TGAAGGAATTAGAAACCTTGAGATTTGGAGCAATCAACTGTAGAGAGTATGAACCGGACCATAACCTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278772.9
ENST00000465019.1
ENST00000612935.4
ENST00000617391.4
CDS TCA 72 bp GTTGATGTAATTCGTCAGAATATATGGTTCTCCATATaGAGTTCTTCTGAGCACTACTGTCTGCCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: VDVIRQNIWFSI*SSSEHYCLPGF
Trigger: AAAGCCAGGCAGACAGTAGTGCTCAGAAGAACTTCATATGGAGAACCATATATTCTGACGAATTACATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465019.1